Moc03g01840 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc03g01840
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Locationchr3: 1385629 .. 1391830 (-)
RNA-Seq ExpressionMoc03g01840
SyntenyMoc03g01840
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATTTCTGGGCTTGGCTTAAAACCTCCAAGAAAGTGCCTGGAGTTCTCTTCCCAAAAGAGAATATCAATTGCTCGTCTTTCACACTGGATACAAAGGCTAGCAGTGCCACTACATCTGTCAGACCCTCCACTTGTAGCTTCTCTTCATTAAACCGAGCCATATAGTCTTTGAGGCTCTCTGTCGCCTTTTGCTTAATATTCAGTAGGTATGCTACAGGTCTGCTTCTAATCCATCCTCCGATGAATTGGGTGACAAACACCCTCACCAATTCCTTAAAGCTTGAAATCAACTTTCTTTTCAACTGTCATAACCAGATGCGTGCCCAACTAGTCAGAGTGAAAAAAAAAAAACACTCTGCATCTAATGGCTTCCGTTATGCCATAAATATCTGTCCATTCTTGGTATGCATCAAGGTGATCGATGGAATCTGTCGAACCGTCGTATTGTGTGATGGTAGGTAGCTTGAACTTCGGAGGAGCTTTTTCCTTCATTATTTTTTCTATAAAGGGCGAGTCGCCTGGTCTATCAATAACTCGAGATCAAATTTCTTGTCTTTGTGTCCTCTTGATCGTATCTATGACTACTTGGTTCGACTTGGTGGTCTTCTTCTATCGACAGTAGTATGCCCGAGGTCGGCTCGGTCAACTGGGTTGCTCTTGCTTTAGTTGGACACGACAACCTCTGTTGTCATACATCTGCTTGCCGACCTGACCGGCCGAAGACGTTGGTTCGAGGTTTGTCGTTTCCTCCTATCTTCAGTTTGCTCCGTGCATGGTTGGTTGTCTCCCCAACTCTTTCAATCATTGGAGCTTTACCCTTTCGTGTATCACGAACAAGTGCTAGTTGTTCCACTTCATGTTGCTCGAATTTTCGTAGAAGCAGGTACATGTTCTGGTGCATTCCCTTAAACTTCTCCTCTAAGGCGGCCATCTTGTCACCTTGTTGATTCAGAACTTCGATCGGTTTGTCTTTCTGTCCGAGAACTAGTCGGCCCGTATCCTTCTGTCCGTCATTTGGTCGGCTCGTATCCTTTGGTCAGAAAACTGGTCGGTCAATCTCTCCTTCGGCTTTCTCGGGCGGAGGTGCACCCCTATTAACTTTCCTCATGTGGTGGCACTCATCGTCAGAATGTTGTAGACTCCTTCCCGAACTCATGTCGACAAGTCTGCAATCTCCAGTCTTCCCTAAAGAGGGCGTCAATTGTTGATGCTAGAATTCGGCCTCTTGGGATCTCGCCCAGTTCACACCAATCTTCTCGAACAACGGGATGGATGAGACCTGCAAAACAAAATAACGCTAAGACCGGTGTGGCTTTTGCCACACGGGCTCCGATGCTTAAGTTAGTGTCGGAGTAGCCAGGTATAGAAAGTAGGGTTTTTAGGCATACACGTAGGGTTTAGCTTACTCTCGTATTTATAGAAGTTGAATCCTAATCCCTTTAGGATTTACATCAGTTGAACTTTAATCCCTTTAAGGTTTACATAAGTTGAATCTTATTCCCTTTAGGATTTACGTAAGTTGAATCCTTATGCACTCAGAAGATTTTAAACGGAGTCGGCCTTATTCTGCATTCAGGGCCGAGACCAAGTCTACTCGGACTGGGCTGCGTGGGGGTCAGGGCGTATTGGAGAGGTTCTCAGCTACTGGGTCGAGAAGTCCTCGACGCCGAGGTCTGGTCGGCGCCTAGCAATGCTCGGCATTGCTCGACGTCGACCCCGGGTCGGCTATGGCCGGCCTGAGTTGTTGCTGGGCCCCGACCCAGTTACCTCTCTTTGGGTTCGCTCCTTCTTCGACTCTCTTTCTTCTTTTCAGTTGTTTAACCTGATCTCTATTTTCTCCCATAACAATATCTATTAATAAAAAGAATTGATTTGTTATTTTAGTAAAGAATAAATTTATTTATCTTTTATAAAAAAAATTTATTTCTCAATTAAAAAAGAAATTATTATTATAATTATAGACTCCAAATCAACCTTCGCATTTTATTAAGATTTCTCAATCCGCAACAGCATTGAAAAATTGCCATCCAAATAAGAAAACATGGTGCCAAGTAAGGTGAGTTAATGAAATTTTTTAAGGCCCGTTTGATAACCATTTCGTTTTAGGTTTTTTGTTTTTTGTTTTTAGTTTTTCAAAAATAGGGCTATTTGATAATCAATTCAATTTTCTCTATTTTGTTTTTCAAAAACCATTTTGAAATTCTATATAAATTAAAAAAAAATTATTTTTCAAAATCAGGTTTTTGTTTTTCAAAATCTCATTTTTTCTTCTAATACTCGACTTTTGTTTTTCTTTCTCATATTTATCTCTAAAAAGTTTTTTTCACTCTAAAAATTTTTTTATTTCTAAATTTCTCTCTACAAACTTTATTTTTATCCTTCTAAAATTTTCATATTTTGAATATTTTATTGTAATTTGTCTCTCTACAAATTTTTCTGTATTTTTTTTTCTAACAGACCAGTTTCAAAATTTAATATTTTTCCTAACTTTCTTCCCTCTAAAATTTCATATTTTATAACTTTTATTTCTCTTCGTAATCTAGTTTTTCCTCTAAAAATCATATTTTATTTTCTCGTTCAATTTTCTTTCACGGTAACTTTTATTTATCTTTGTATTTATTTATTTTCTATAAAAATTTTATTTTGGATCTTGTTTTTATCTCTAAATTTGTTTCTACTATAATTTTTATATTTCTTTATAATTTTTTTTTTCTTTAACATATATTTTCCTCTGGACTTTTTTTTTCTCTTTTTGTCTTTAACTTTTCTTTCACTATTTTTTTTCTAAATATTTTTATTTATCTTCCACAAGTTTACGTACATCTCTATTTTCATGTCTCTACATTAGGGGGAGACAAAAATTTTCGTAGGTTCGATTCCCAAAAATAGAAAATGCATGTCCGAACCCCGTCCCTGTCTCCGATTCCATTTTTTAAATAATTAATATATATTTATTACACTTTTTTTATGCTTAAATTCTAAAAATAATTAAAAACAATTAGAAAACCGATAATTTTTTTCGAGATCATCTCTCGAGCCCAAGAACGAGGTGGAGACGGAGACTAAAAATTTTCACGAGCTCGATGATCGGAGAGAGCATCCTCACTCGCAGTCACATCATTGTCATCTCTACTCTACATAAAATTTTCTCTCTCTAATATGTATTTTCAATTTTCTAACTTTTTAAAAACAAAAAACCTAAAAATGGTTACCAAACATGTTTTGAAACAAAAAAACCAAAAACTAAAAACAATAAAAACCAAAAACTAAAATGGTTATCAAACAGGCCCTTAGCTAAAGGTTTTTTTGAAGGAGGTTAAAAAATTATTAAGACTTTTGAAGAAAAATATTAGCATCAAATCTTGGCCGCGGCCTCCAAACATATCGAAACATATATGTGTGCATATATATATTTGAATATATATATAATTGAATTAGTACAATATGTGGAGGTGAGGATTTGAACTTTCAACCTCGTCGTTGGATACATGTGCTTTAATCCACTAAATTATGCTCTGGTTGACGGCCTCCAAAGATAATGATGTTTCACCTTGTAAATTATTGATACCTCAAATAATCTAAATTTCATAATTTTATAGGATTTTTCTAAAGGATTACAACGTAATTATTGAACCTATAAAAAATACATCATCCTTTTATATGTATATATATATATATATATATATATATATATATATATATAAAAAAATACATCATCTTTTTATATATATATCTATATCTATAGTATATATAAAATGTGGGATGAGGAGAAACTTCTATATACCATTTTTGCCCTCTCATTATAACTCTTTTCACTTTTCTTTTCTTTTGATGACAATTGTGTCATTTAAATACAAACTTTCTCTCTCTCAATTTATCTCTTCCCTCCGTCACGATCCCATCCCTCTAAATTCCCCTATTTTCTCTTACTAATCTTCTCTCTCTTGATTATTCTTTCATTAACTTTATCTTTCTCATTGATTTTTTTTAACTCCTTTCATCTACCACATACCCTCTCCCAATCCTTTCATCTTCCTAACCCCCTTCCAATTATCACATACCCTCTCCCAATCCTTTCATCTTCCCAATCCCCTTCCAATCCATATATAAATATGTGTCCTCTCTTTCTCATGCCAACCAAAAATCAAGAGGTGGTGGATGGAACAAAGTGGAAAATTTTCCAAGTAGTGTGAAGGTATGAAGATTATTCTCTTGCTTTAGTAACGACAACAACAATGCACATATGGGTGATCGAGAAGATAATTGATAGTTAAGAGAAACCAAATTAAAGCTGAGTTGATGGCATCGGTTCGCTTTCCCCAAATTTATCATTGTTCAAATTGAAAGAAATTCTAAAGTACGATGTGTCGAGATGGTGGTCGATGGAATCGAGATAAAGCAAAATTCGATTATTATCATAATTTGGATAATAAGAATGCTTATGAGTTTGATTTTTATTTATTTATTTTTTAAACTGATGCTTTTGATTTATATATGTGAAAGTTAGGGCAAACAAACAATTTTTATCCCTCTCAATATCATCAAGTTGGACCTTTTAGGGTTTACTCTTTCTCTCACTCTTAGCTTTCTTTTTCATTCTAGAATGAACAAACTCAATGATTTAACGTCACACAATTTAACAAAGATAAAATGTAATATAATAATTTATAATCAAGAAAATTAGAGGTAAATTAAGAACGTTCATTCATTAAAAAAAAAAAAAACTTGCACATTGGTGCTTTTTCATCTTTCTTACACTTCAAATTTGTACTTACTTTCCATGCTAATATTTCAACATCTTCTTTTATTACAACAATATCATACCTTGAATTTATATTTATATATAATCACTTTCTTTCTTTAAAATGATAATATTATAAGCTTAAAAATACTATTTGTTTTACTTTAATTTAGAACTACAAGATTCTACGTGCACCGCACGTGTTTCTTACTAGTATATATATATGATAAAAAATACATCATTCGCAACATGAAAATTTTGACATAATATACATAAGTATTTATCAAAATTGAAATTTGAATCAATCCTGTTTATGCAAGGGTCTGCACAACGGTACTTTACGAACCTAGCCCGAACCCGGTCTCCGGTTCGACCTAAACACAAGAGCGGACCTGCACAAGAGGGTAAACACTCCGACGCTCAAGTCAGTATAGGTCGGACTCTGTATTTAGTTCGAGGTGAGATTCGATACCTGAGCGTGAAATGAGGCCCTCTATTTATAGGTGGTGGATCCGACAATACACACTACCGGCGGTTACATGCTTTTTCTCATATCGGACCTGTCGGATTTCGAGTAGATCAAACCCCAAACAGATCGGACTTCGGCATGTATACTTAGCCTGTTCCCGATGGGTGAATCCGACCTCTTCGGCAGGGCCGATGTGGACCTGGGATATTCAATCCTTGCACACTAGTAAGCATCCTCCACGTGTCCAAATATGGTAGGTCAGTCATTTTTCCTTGTTTTTATTCTTATTTCAAATATGGTAGTTTTCTTGTTTTCCCCTTCAAGTAGTGATAGCCTAGGCAACGCAGGTCGAACTATAAGCAGTTCGTCCCCCAAACCAAGTGATTCTGGGGAGGTCCTAGCTCTTAGGTTAGAGTCCGAGCTGGAAGAAATAGAAAATTGCACATGGCAGGAACAGACTGCACCTTATGTGGCGAGGTGGTGTTAGCATGGAGATTTTATTATTGTCAATCCTCCCGTGGACAATGATGGTGCTTGCGATCCAAAATACATGAGTTGGTATTTATCCATCACTAGGTGATATACCACTCGTGAAGGAGCAGCATTTGGTGCTACTGTATAATTTTTAATTTGGTTATATAAAATATTTGAATTTAAATATATATTTATTCAATTTTTTTTTCATGTAGGCTGTATGTTTCGAGCAAATAAGTATTATCTCATCATTAGAAGATATTAATAGGTTGTGTAACGTTGGTGGGAGACATCTGCAAAGCCTTCATCAGATGTATAAAGTGCCTACTCCGGTTCGTGGTCCTATACGTAGAGGACGTCGTCAAGTAGATCAGGATGCCCCAGTAGAGCTTGATGATTCTATACCTGAAGTTATTTATTATAACGTCGAAGAGGTTCCATCGTTTACACAGACACAGGATGATGCTGGTCCGTCCACGCCTATGGTCATGATACCAACTTCTGGTTCTAGTTAG

mRNA sequence

ATGTATTTCTGGGCTTGGCTTAAAACCTCCAAGAAAGTGCCTGGAGTTCTCTTCCCAAAAGAGAATATCAATTGCTCGTCTTTCACACTGGATACAAAGGCTAGCAGTGCCACTACATCTGTATGCTACAGTAGTATGCCCGAGGTCGGCTCGGTCAACTGGGTTGCTCTTGCTTTAGTTGGACACGACAACCTCTGTTGTCATACATCTGCTTGCCGACCTGACCGGCCGAAGACGTTGGTTCGAGAACTTCGATCGGTTTGTCTTTCTGTCCGAGAACTAGTCGGCCCGTATCCTTCTGTCCGTCATTTGGTCGGCTCGTATCCTTTGAATGTTGTAGACTCCTTCCCGAACTCATGTCGACAAGTCTGCAATCTCCAGTCTTCCCTAAAGAGGGCGTCAATTGTTGATGCTAGAATTCGGCCTCTTGGGATCTCGCCCAGTTCACACCAATCTTCTCGAACAACGGGATGGATGAGACCTGCAAAACAAAATAACGCTAAGACCGGTGTGGCTTTTGCCACACGGGCTCCGATGCTTAAGTTAGGCCGAGACCAAGTCTACTCGGACTGGGCTGCGTGGGGGTCAGGGCGTATTGGAGAGGTTCTCAGCTACTGGGTCGAGAAGTCCTCGACGCCGAGGTCTGGTCGGCGCCTAGCAATGCTCGGCATTGCTCGACGTCGACCCCGGGTCGGCTATGGCCGGCCTGAGTTGTTGCTGGGCCCCGACCCAGTTACCTCTCTTTGGATCAAACCCCAAACAGATCGGACTTCGGCATGTATACTTAGCCTGTTCCCGATGGGTGAATCCGACCTCTTCGGCAGGGCCGATGTGGACCTGGGATATTCAATCCTTGCACACTATAGTGATAGCCTAGGCAACGCAGGTCGAACTATAAGCAGTTCGTCCCCCAAACCAAGTGATTCTGGGGAGGTCCTAGCTCTTAGGTTAGAGTCCGAGCTGGAAGAAATAGAAAATTGCACATGGCAGGAACAGACTGCACCTTATGTGGCGAGGTTGTGTAACGTTGGTGGGAGACATCTGCAAAGCCTTCATCAGATGTATAAAGTGCCTACTCCGGTTCGTGGTCCTATACGTAGAGGACGTCGTCAAGTAGATCAGGATGCCCCAGTAGAGCTTGATGATTCTATACCTGAAGTTATTTATTATAACGTCGAAGAGGTTCCATCGTTTACACAGACACAGGATGATGCTGGTCCGTCCACGCCTATGGTCATGATACCAACTTCTGGTTCTAGTTAG

Coding sequence (CDS)

ATGTATTTCTGGGCTTGGCTTAAAACCTCCAAGAAAGTGCCTGGAGTTCTCTTCCCAAAAGAGAATATCAATTGCTCGTCTTTCACACTGGATACAAAGGCTAGCAGTGCCACTACATCTGTATGCTACAGTAGTATGCCCGAGGTCGGCTCGGTCAACTGGGTTGCTCTTGCTTTAGTTGGACACGACAACCTCTGTTGTCATACATCTGCTTGCCGACCTGACCGGCCGAAGACGTTGGTTCGAGAACTTCGATCGGTTTGTCTTTCTGTCCGAGAACTAGTCGGCCCGTATCCTTCTGTCCGTCATTTGGTCGGCTCGTATCCTTTGAATGTTGTAGACTCCTTCCCGAACTCATGTCGACAAGTCTGCAATCTCCAGTCTTCCCTAAAGAGGGCGTCAATTGTTGATGCTAGAATTCGGCCTCTTGGGATCTCGCCCAGTTCACACCAATCTTCTCGAACAACGGGATGGATGAGACCTGCAAAACAAAATAACGCTAAGACCGGTGTGGCTTTTGCCACACGGGCTCCGATGCTTAAGTTAGGCCGAGACCAAGTCTACTCGGACTGGGCTGCGTGGGGGTCAGGGCGTATTGGAGAGGTTCTCAGCTACTGGGTCGAGAAGTCCTCGACGCCGAGGTCTGGTCGGCGCCTAGCAATGCTCGGCATTGCTCGACGTCGACCCCGGGTCGGCTATGGCCGGCCTGAGTTGTTGCTGGGCCCCGACCCAGTTACCTCTCTTTGGATCAAACCCCAAACAGATCGGACTTCGGCATGTATACTTAGCCTGTTCCCGATGGGTGAATCCGACCTCTTCGGCAGGGCCGATGTGGACCTGGGATATTCAATCCTTGCACACTATAGTGATAGCCTAGGCAACGCAGGTCGAACTATAAGCAGTTCGTCCCCCAAACCAAGTGATTCTGGGGAGGTCCTAGCTCTTAGGTTAGAGTCCGAGCTGGAAGAAATAGAAAATTGCACATGGCAGGAACAGACTGCACCTTATGTGGCGAGGTTGTGTAACGTTGGTGGGAGACATCTGCAAAGCCTTCATCAGATGTATAAAGTGCCTACTCCGGTTCGTGGTCCTATACGTAGAGGACGTCGTCAAGTAGATCAGGATGCCCCAGTAGAGCTTGATGATTCTATACCTGAAGTTATTTATTATAACGTCGAAGAGGTTCCATCGTTTACACAGACACAGGATGATGCTGGTCCGTCCACGCCTATGGTCATGATACCAACTTCTGGTTCTAGTTAG

Protein sequence

MYFWAWLKTSKKVPGVLFPKENINCSSFTLDTKASSATTSVCYSSMPEVGSVNWVALALVGHDNLCCHTSACRPDRPKTLVRELRSVCLSVRELVGPYPSVRHLVGSYPLNVVDSFPNSCRQVCNLQSSLKRASIVDARIRPLGISPSSHQSSRTTGWMRPAKQNNAKTGVAFATRAPMLKLGRDQVYSDWAAWGSGRIGEVLSYWVEKSSTPRSGRRLAMLGIARRRPRVGYGRPELLLGPDPVTSLWIKPQTDRTSACILSLFPMGESDLFGRADVDLGYSILAHYSDSLGNAGRTISSSSPKPSDSGEVLALRLESELEEIENCTWQEQTAPYVARLCNVGGRHLQSLHQMYKVPTPVRGPIRRGRRQVDQDAPVELDDSIPEVIYYNVEEVPSFTQTQDDAGPSTPMVMIPTSGSS
Homology
[Close]
BLAST of Moc03g01840 vs. NCBI nr
Match: XP_022149984.1 (serine/threonine-protein phosphatase 7 long form homolog [Momordica charantia])

HSP 1 Score: 109.0 bits (271), Expect = 1.0e-19
Identity = 51/66 (77.27%), Postives = 56/66 (84.85%), Query Frame = 0 

Query: 354 MYKVPTPVRGPIRRGRRQVDQDAPVELDDSIPEVIYYNVEEVPSFTQTQDDAGPSTPMVM 413
           MY V TP RGP  RGRRQVDQDAP+ELDD +PEVIY+NVE++P FTQTQDDAG STPM M
Sbjct: 330 MYNVSTPARGPRLRGRRQVDQDAPIELDDPVPEVIYHNVEDIPPFTQTQDDAGSSTPMFM 389

Query: 414 IPTSGS 420
           IPT GS
Sbjct: 390 IPTPGS 395

[Close]
BLAST of Moc03g01840 vs. NCBI nr
Match: XP_022152034.1 (disease resistance protein RGA2-like [Momordica charantia])

HSP 1 Score: 99.0 bits (245), Expect = 1.0e-16
Identity = 48/76 (63.16%), Postives = 56/76 (73.68%), Query Frame = 0 

Query: 345 GRHLQSLHQMYKVPTPVRGPIRRGRRQVDQDAPVELDDSIPEVIYYNVEEVPSFTQTQDD 404
           GRHLQ LHQMY+VP P     RRGRRQ++QDAP E +   PE IY+NV+ VP F +TQ+D
Sbjct: 857 GRHLQRLHQMYRVPIPTHSHTRRGRRQLEQDAPNEPNIPEPEAIYHNVDGVPPFIKTQND 916

Query: 405 AGPSTPMVMIPTSGSS 421
            GP TPMVMIPT  SS
Sbjct: 917 VGPCTPMVMIPTPSSS 932

[Close]
BLAST of Moc03g01840 vs. NCBI nr
Match: KAA0038951.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 62.4 bits (150), Expect = 1.1e-05
Identity = 34/83 (40.96%), Postives = 51/83 (61.45%), Query Frame = 0 

Query: 337 VARLCNVGGRHLQSLHQMYKVPTPVRGPIRRGRRQVDQDAPVELDDSIPEVIYYNVEEVP 396
           V  +CN   R+++ +H MY + + V  P+ RGR +V++    ELD+     +Y+NVEEVP
Sbjct: 165 VLNICNNNKRYMEEIHNMYDL-SIVPPPVHRGRVRVEE---AELDE-----VYHNVEEVP 224

Query: 397 SFTQTQDDAGPSTPMVMIPTSGS 420
             TQTQ   G  +PM M+PT G+
Sbjct: 225 PTTQTQSQTGYGSPMTMMPTFGA 238

[Close]
BLAST of Moc03g01840 vs. NCBI nr
Match: TYK11193.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 62.4 bits (150), Expect = 1.1e-05
Identity = 34/83 (40.96%), Postives = 51/83 (61.45%), Query Frame = 0 

Query: 337 VARLCNVGGRHLQSLHQMYKVPTPVRGPIRRGRRQVDQDAPVELDDSIPEVIYYNVEEVP 396
           V  +CN   R+++ +H MY + + V  P+ RGR +V++    ELD+     +Y+NVEEVP
Sbjct: 156 VLNICNNNKRYMEEIHNMYDL-SIVPPPVHRGRVRVEE---AELDE-----VYHNVEEVP 215

Query: 397 SFTQTQDDAGPSTPMVMIPTSGS 420
             TQTQ   G  +PM M+PT G+
Sbjct: 216 PTTQTQSQTGYGSPMTMMPTFGA 229

[Close]
BLAST of Moc03g01840 vs. NCBI nr
Match: KAA0025972.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 60.8 bits (146), Expect = 3.1e-05
Identity = 34/82 (41.46%), Postives = 49/82 (59.76%), Query Frame = 0 

Query: 337 VARLCNVGGRHLQSLHQMYKVPTPVRGPIRRGRRQVDQDAPVELDDSIPEVIYYNVEEVP 396
           V  +CN   RH++ +H MY +P  V   I RGR QV++    ELD+     +Y+NVEE+ 
Sbjct: 52  VLDICNNNKRHMEEIHNMYHLPI-VPPQIHRGRVQVEE---AELDE-----VYHNVEEMT 111

Query: 397 SFTQTQDDAGPSTPMVMIPTSG 419
             TQ Q+  G  +PM+M+PT G
Sbjct: 112 PTTQKQNQTGYGSPMIMMPTFG 124

[Close]
BLAST of Moc03g01840 vs. ExPASy TrEMBL
Match: A0A6J1D8N6 (serine/threonine-protein phosphatase 7 long form homolog OS=Momordica charantia OX=3673 GN=LOC111018266 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 4.9e-20
Identity = 51/66 (77.27%), Postives = 56/66 (84.85%), Query Frame = 0 

Query: 354 MYKVPTPVRGPIRRGRRQVDQDAPVELDDSIPEVIYYNVEEVPSFTQTQDDAGPSTPMVM 413
           MY V TP RGP  RGRRQVDQDAP+ELDD +PEVIY+NVE++P FTQTQDDAG STPM M
Sbjct: 330 MYNVSTPARGPRLRGRRQVDQDAPIELDDPVPEVIYHNVEDIPPFTQTQDDAGSSTPMFM 389

Query: 414 IPTSGS 420
           IPT GS
Sbjct: 390 IPTPGS 395

[Close]
BLAST of Moc03g01840 vs. ExPASy TrEMBL
Match: A0A6J1DEU3 (disease resistance protein RGA2-like OS=Momordica charantia OX=3673 GN=LOC111019843 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 5.0e-17
Identity = 48/76 (63.16%), Postives = 56/76 (73.68%), Query Frame = 0 

Query: 345 GRHLQSLHQMYKVPTPVRGPIRRGRRQVDQDAPVELDDSIPEVIYYNVEEVPSFTQTQDD 404
           GRHLQ LHQMY+VP P     RRGRRQ++QDAP E +   PE IY+NV+ VP F +TQ+D
Sbjct: 857 GRHLQRLHQMYRVPIPTHSHTRRGRRQLEQDAPNEPNIPEPEAIYHNVDGVPPFIKTQND 916

Query: 405 AGPSTPMVMIPTSGSS 421
            GP TPMVMIPT  SS
Sbjct: 917 VGPCTPMVMIPTPSSS 932

[Close]
BLAST of Moc03g01840 vs. ExPASy TrEMBL
Match: A0A5A7TBF8 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84G00270 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 5.2e-06
Identity = 34/83 (40.96%), Postives = 51/83 (61.45%), Query Frame = 0 

Query: 337 VARLCNVGGRHLQSLHQMYKVPTPVRGPIRRGRRQVDQDAPVELDDSIPEVIYYNVEEVP 396
           V  +CN   R+++ +H MY + + V  P+ RGR +V++    ELD+     +Y+NVEEVP
Sbjct: 165 VLNICNNNKRYMEEIHNMYDL-SIVPPPVHRGRVRVEE---AELDE-----VYHNVEEVP 224

Query: 397 SFTQTQDDAGPSTPMVMIPTSGS 420
             TQTQ   G  +PM M+PT G+
Sbjct: 225 PTTQTQSQTGYGSPMTMMPTFGA 238

[Close]
BLAST of Moc03g01840 vs. ExPASy TrEMBL
Match: A0A5D3CH23 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G00320 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 5.2e-06
Identity = 34/83 (40.96%), Postives = 51/83 (61.45%), Query Frame = 0 

Query: 337 VARLCNVGGRHLQSLHQMYKVPTPVRGPIRRGRRQVDQDAPVELDDSIPEVIYYNVEEVP 396
           V  +CN   R+++ +H MY + + V  P+ RGR +V++    ELD+     +Y+NVEEVP
Sbjct: 156 VLNICNNNKRYMEEIHNMYDL-SIVPPPVHRGRVRVEE---AELDE-----VYHNVEEVP 215

Query: 397 SFTQTQDDAGPSTPMVMIPTSGS 420
             TQTQ   G  +PM M+PT G+
Sbjct: 216 PTTQTQSQTGYGSPMTMMPTFGA 229

[Close]
BLAST of Moc03g01840 vs. ExPASy TrEMBL
Match: A0A5A7SLF8 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G002870 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.5e-05
Identity = 34/82 (41.46%), Postives = 49/82 (59.76%), Query Frame = 0 

Query: 337 VARLCNVGGRHLQSLHQMYKVPTPVRGPIRRGRRQVDQDAPVELDDSIPEVIYYNVEEVP 396
           V  +CN   RH++ +H MY +P  V   I RGR QV++    ELD+     +Y+NVEE+ 
Sbjct: 52  VLDICNNNKRHMEEIHNMYHLPI-VPPQIHRGRVQVEE---AELDE-----VYHNVEEMT 111

Query: 397 SFTQTQDDAGPSTPMVMIPTSG 419
             TQ Q+  G  +PM+M+PT G
Sbjct: 112 PTTQKQNQTGYGSPMIMMPTFG 124

The following BLAST results are available for this feature:
BLAST of Moc03g01840 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022149984.11.0e-1977.27serine/threonine-protein phosphatase 7 long form homolog [Momordica charantia][more]
XP_022152034.11.0e-1663.16disease resistance protein RGA2-like [Momordica charantia][more]
KAA0038951.11.1e-0540.96mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis ... [more]
TYK11193.11.1e-0540.96mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis ... [more]
KAA0025972.13.1e-0541.46mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis ... [more]
BLAST of Moc03g01840 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc03g01840 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1D8N64.9e-2077.27serine/threonine-protein phosphatase 7 long form homolog OS=Momordica charantia ... [more]
A0A6J1DEU35.0e-1763.16disease resistance protein RGA2-like OS=Momordica charantia OX=3673 GN=LOC111019... [more]
A0A5A7TBF85.2e-0640.96Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi... [more]
A0A5D3CH235.2e-0640.96Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi... [more]
A0A5A7SLF81.5e-0541.46Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi... [more]
BLAST of Moc03g01840 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 399..420

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc03g01840.1Moc03g01840.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010073 meristem maintenance