Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGCTTAGGGATCTCTCCATCCTGCTCTCAAAGATACTCCAATTCCGACCTCAAGGCCCAGTCAAAATACACACCGTTGACGCTAGAGGCTATCATAACGAGGGAAAAGTTCGACCTGATGAAAATAGGTTCGACGAGCAAGTTGAGGCACTTAAGGCTAAGTGCGAAAAGAAAGAAAACCCATTTGATGATGGCGAGATGGGTGAATCACCATTCACCTCGAACGTCTTGGAGGCCTCAATCCCTCCATAGTTTAAAATGCCTGCCATGAAACCCTACGACAGGTCTAAGGACCCAAAGGACTACGTAGAGGTTTTTGAAGACCTTATGGACTTCCAAGCGGCGTCTGACGCCATCAACTACCAAGCCTTTCAGATTGCTCTCACGGGGAGCGCTCGGCCCTGGTACAGAAGGTTGCCGACAAGGTCGATCTCGACCTACAATCAGCTGAGGAAAGAGTTCATTAGCCAATTCTCTTTTCGGCATTATGACAGGAAAACTGCCACTCACGTCGCCACCATCTGACAGAAATAAGGCAAGACTTTGAGAGAATATGTGACCCACTTCCAGAAGGAGCAGCTTAAGGTCGCGCATTGCTCTGACGACTCGGTCATGTGCTACTTCATTACTAGCCTGGTCAACGAAACTCTGAAGGTTAAACTGGGCGAAGAAGCACTGTCAACCTTCGTTGAGGTCTTGCAAAAGGCCAATAAAGTCATAGATGGGCAGGAGCTGCTCAGAACTAAGCTAGGTCAGACGGACCTAGGTCCGACCAGAGAAAGTCAGGAGGCCAAGACAAAGGAAAGTATGATTCTAAGTCCACCGCGACCACGGCCATGATACCTCAAGCTGTTGGGAGTTGAAGCGTCAGATTGAAGACTTGATTCAAAACGGCTACTTCAAAAAATATGTTGTAAAGCCGGGCTCAATCTTGGCAGAAAAGAAAGAATAGAGGAAGCGTTCAAGGACGCCACCTAGAAGGGATGACCGACCTACGGTCATTAATACCATCTTTGGAGGCCCGAGTAGGGGCCACTCAAGAAATAAAAGGAAGGAGCTAGCCAGGGAAGCTCAGCGTGAAGTCTTCCAAGAGCATAAGCCGACATGCCCTATCTCCTTCTCCGACTCCGATCTTGAGGGGATGCATTTGCCCCACAATGACACCTTGGTGATCTCACCGCCGATCGACCATATGCAGGTCAGAAGGGTGTTAGTCGATGGAGGTGCTTCAGCTAACATTCTATCTCTCAACACTTATTTAATGCTGGGATGGACCAGGGCGCAGTTGAAGAAAAGTCCAACACCTTTAGTTGGATTCGCAGGATAA
mRNA sequence
ATGAGGCTTAGGGATCTCTCCATCCTGCTCTCAAAGATACTCCAATTCCGACCTCAAGGCCCAGTCAAAATACACACCGTTGACGCTAGAGGCTATCATAACGAGGGAAAAGTTCGACCTGATGAAAATAGGTTCGACGAGCAAGTTGAGGCACTTAAGGCTAAGTCTAAGGACCCAAAGGACTACGTAGAGGTTTTTGAAGACCTTATGGACTTCCAAGCGGCGTCTGACGCCATCAACTACCAAGCCTTTCAGATTGCTCTCACGGGGAGCGCTCGGCCCTGCCTGGTCAACGAAACTCTGAAGGTTAAACTGGGCGAAGAAGCACTGTCAACCTTCGTTGAGGTCTTGCAAAAGGCCAATAAAGTCATAGATGGGCAGGAGCTGCTCAGAACTAAGCTAGGTCAGACGGACCTAGGTCCGACCAGAGAAAGTCAGGAGGCCAAGACAAAGGAAAGCCCGAGTAGGGGCCACTCAAGAAATAAAAGGAAGGAGCTAGCCAGGGAAGCTCAGCGTGAAGTCTTCCAAGAGCATAAGCCGACATGCCCTATCTCCTTCTCCGACTCCGATCTTGAGGGGATGCATTTGCCCCACAATGACACCTTGGTGATCTCACCGCCGATCGACCATATGCAGGTCAGAAGGGTGTTAGTCGATGGAGGTGCTTCAGCTAACATTCTATCTCTCAACACTTATTTAATGCTGGGATGGACCAGGGCGCAGTTGAAGAAAAGTCCAACACCTTTAGTTGGATTCGCAGGATAA
Coding sequence (CDS)
ATGAGGCTTAGGGATCTCTCCATCCTGCTCTCAAAGATACTCCAATTCCGACCTCAAGGCCCAGTCAAAATACACACCGTTGACGCTAGAGGCTATCATAACGAGGGAAAAGTTCGACCTGATGAAAATAGGTTCGACGAGCAAGTTGAGGCACTTAAGGCTAAGTCTAAGGACCCAAAGGACTACGTAGAGGTTTTTGAAGACCTTATGGACTTCCAAGCGGCGTCTGACGCCATCAACTACCAAGCCTTTCAGATTGCTCTCACGGGGAGCGCTCGGCCCTGCCTGGTCAACGAAACTCTGAAGGTTAAACTGGGCGAAGAAGCACTGTCAACCTTCGTTGAGGTCTTGCAAAAGGCCAATAAAGTCATAGATGGGCAGGAGCTGCTCAGAACTAAGCTAGGTCAGACGGACCTAGGTCCGACCAGAGAAAGTCAGGAGGCCAAGACAAAGGAAAGCCCGAGTAGGGGCCACTCAAGAAATAAAAGGAAGGAGCTAGCCAGGGAAGCTCAGCGTGAAGTCTTCCAAGAGCATAAGCCGACATGCCCTATCTCCTTCTCCGACTCCGATCTTGAGGGGATGCATTTGCCCCACAATGACACCTTGGTGATCTCACCGCCGATCGACCATATGCAGGTCAGAAGGGTGTTAGTCGATGGAGGTGCTTCAGCTAACATTCTATCTCTCAACACTTATTTAATGCTGGGATGGACCAGGGCGCAGTTGAAGAAAAGTCCAACACCTTTAGTTGGATTCGCAGGATAA
Protein sequence
MRLRDLSILLSKILQFRPQGPVKIHTVDARGYHNEGKVRPDENRFDEQVEALKAKSKDPKDYVEVFEDLMDFQAASDAINYQAFQIALTGSARPCLVNETLKVKLGEEALSTFVEVLQKANKVIDGQELLRTKLGQTDLGPTRESQEAKTKESPSRGHSRNKRKELAREAQREVFQEHKPTCPISFSDSDLEGMHLPHNDTLVISPPIDHMQVRRVLVDGGASANILSLNTYLMLGWTRAQLKKSPTPLVGFAG
Homology
BLAST of Moc03g01610 vs. NCBI nr
Match:
XP_022155139.1 (uncharacterized protein LOC111022280 [Momordica charantia])
HSP 1 Score: 192.6 bits (488), Expect = 4.2e-45
Identity = 152/386 (39.38%), Postives = 174/386 (45.08%), Query Frame = 0
Query: 42 ENRFDEQVEALKAK-----------------------------------------SKDPK 101
++RFDEQVEALKA+ SKDPK
Sbjct: 93 KHRFDEQVEALKARCEKKESPFDDDDLGESPFTSDIMEAPIPPKFKTPTMKPYDGSKDPK 152
Query: 102 DYVEVFEDLMDFQAASDAINYQAFQIALTGSAR------PC------------------- 161
DYVEVFE LMDFQAA+DAI AFQIALTGSAR P
Sbjct: 153 DYVEVFEGLMDFQAATDAIKCLAFQIALTGSARLWCRRLPARSISTYSQLRKEFIGQFSF 212
Query: 162 ----------------LVNETLKVKLGEEALSTFVEVLQKANKVIDGQELLRTK------ 221
+ETL VKLGEEA +TF EVLQ A KVIDGQELLRTK
Sbjct: 213 RHYDRKTATHLATIRQKEDETLTVKLGEEAPATFAEVLQNAKKVIDGQELLRTKTDRPEK 272
Query: 222 -LGQTDLGPTRESQEAKTKE---------------------------------------- 254
+ Q L + ++K+K+
Sbjct: 273 QIDQKRLSQKKRKDDSKSKDKGSSSSGSRTEYRRSESGPSRSRPYERCWELKRQIEDLIQ 332
BLAST of Moc03g01610 vs. NCBI nr
Match:
XP_022156088.1 (uncharacterized protein LOC111023060 [Momordica charantia])
HSP 1 Score: 190.3 bits (482), Expect = 2.1e-44
Identity = 138/328 (42.07%), Postives = 158/328 (48.17%), Query Frame = 0
Query: 56 SKDPKDYVEVFEDLMDFQAASDAINYQAFQIALTGSAR---------------------- 115
SKDPKDYVEVFE LMDFQAA+DAI +AFQIALTGSAR
Sbjct: 163 SKDPKDYVEVFEGLMDFQAATDAIKCRAFQIALTGSARLWYRRLPARSISTYSQLRKEFI 222
Query: 116 ------------------------------------------------------PCLVNE 175
L +E
Sbjct: 223 SQFFSRHYDRKTTTHLATIRQKEGKTLKEYITRFQEEQLKVVHCSDDSSMCYFLTGLADE 282
Query: 176 TLKVKLGEEALSTFVEVLQKANKVIDGQELLRTK-------LGQTDLGPTRESQEAKTKE 235
T VKLGEEAL+TF EVLQ K IDGQELLRTK + Q + ++K+K+
Sbjct: 283 TPTVKLGEEALATFAEVLQMEKKFIDGQELLRTKTDRPEKQIDQKKSSQDKRKADSKSKD 342
Query: 236 ---------------------------------------------SPSRGHSRNKRKELA 254
PS G S NKRKELA
Sbjct: 343 KGSSSSNSRTDYCRSNSVEKKEERKRSRTPPRLDDRPAVINTIFGGPSGGQSGNKRKELA 402
BLAST of Moc03g01610 vs. NCBI nr
Match:
XP_022150385.1 (uncharacterized protein LOC111018561 [Momordica charantia])
HSP 1 Score: 189.1 bits (479), Expect = 4.6e-44
Identity = 135/293 (46.08%), Postives = 158/293 (53.92%), Query Frame = 0
Query: 42 ENRFDEQVEALKAKSKDP---KDYVEVF-EDLMDFQAASDAINYQAFQIALTGSARPCLV 101
++RFDEQVEALK + K+ K+YV F E+ + SD A LTG L
Sbjct: 81 KHRFDEQVEALKVRHKEGETLKEYVTRFQEEQLKVAHCSDD---SAMCYFLTG-----LA 140
Query: 102 NETLKVKLGEEALSTFVEVLQKANKVIDGQELLRTKLG-------QTDLGPTRESQEAKT 161
+ETL VKLGEEA +TF EVLQKA KVIDGQELLRTK G Q L + ++K
Sbjct: 141 DETLTVKLGEEAPATFAEVLQKAKKVIDGQELLRTKTGRPEKQIDQKKLNQEKRKVDSKP 200
Query: 162 KE---------------------------------------------------------- 221
K+
Sbjct: 201 KDKGSSSSVSRIDCWELKRQIEDLIQDGYFKKFVGKPRFNSVEKKEERKRSRTPPRRDDR 260
Query: 222 ---------SPSRGHSRNKRKELAREAQREVF--QEHKPTCPISFSDSDLEGMHLPHNDT 255
PS G S NKRKEL REA+REVF +E + TC I+F D+DLEG+HLPHND
Sbjct: 261 PAVINTIFGGPSGGQSGNKRKELVREARREVFIIREQRSTCSITFDDTDLEGVHLPHNDA 320
BLAST of Moc03g01610 vs. NCBI nr
Match:
XP_022155971.1 (uncharacterized protein LOC111022955 [Momordica charantia])
HSP 1 Score: 187.6 bits (475), Expect = 1.3e-43
Identity = 150/383 (39.16%), Postives = 160/383 (41.78%), Query Frame = 0
Query: 56 SKDPKDYVEVFEDLMDFQAASDAINYQAFQIALTGSAR---------------------- 115
SKDPKDYVEVFE LMDFQA SDAI +A IALTGSAR
Sbjct: 7 SKDPKDYVEVFEGLMDFQAMSDAIKCRAIPIALTGSARLWYRRLLARLISTYSQLRKEFI 66
Query: 116 -------------------------------PCLVNETLKVKLGEEALSTFVEVLQKANK 175
E LKVKLGEEA STFVEVLQKA K
Sbjct: 67 SQFSFRHYDRKTATHLATIQQKEGETLREYVTRFQEEQLKVKLGEEAPSTFVEVLQKAKK 126
Query: 176 VIDGQELLRTKLGQTDL--------GPTRESQEAKTKE---------------------- 235
VIDGQELLRTKLG TD G + + K+K+
Sbjct: 127 VIDGQELLRTKLGLTDKRFDQRKSGGQDKGKSDPKSKDKGSSSQPSKGRSDYRRSDSDSN 186
Query: 236 ------------------------------------------------------------ 247
Sbjct: 187 RRGSYERYTPTIIPISDILTNIEENGLEKLFKHSKDRYCRFRRDHGHDTSSCWELKCQIE 246
BLAST of Moc03g01610 vs. NCBI nr
Match:
XP_022150760.1 (uncharacterized protein LOC111018823 [Momordica charantia])
HSP 1 Score: 182.6 bits (462), Expect = 4.3e-42
Identity = 144/366 (39.34%), Postives = 163/366 (44.54%), Query Frame = 0
Query: 56 SKDPKDYVEVFEDLMDFQAASDAINYQAFQIALTGSAR---------------------- 115
SKDPKDYVEVFE LMDFQAASDAI +AFQIALTGSAR
Sbjct: 76 SKDPKDYVEVFEGLMDFQAASDAIKCRAFQIALTGSARLWFQEDQLKVAQSSDDSAMCYF 135
Query: 116 -PCLVNETLKVKLGEEALSTFVEVLQKANKVIDGQELLRTKLG---------------QT 175
L +E L VKLG+EA +TF EVLQKA KVIDGQELLRTK G +
Sbjct: 136 LTGLADEALTVKLGKEAPATFAEVLQKAKKVIDGQELLRTKTGRPERGIDRGRSGKDEKA 195
Query: 176 DL--------------------GPTR---------------------------------- 235
DL GPTR
Sbjct: 196 DLKSKDKGSFSSGRAEFRRAVNGPTRSRPYERFTPTTIPISEILTNIEESGMEKLLKRPE 255
Query: 236 ---------------------------------------------------ESQEAKTKE 254
+ A+ KE
Sbjct: 256 KLRGAPERRNKDKYCRFHREHDHNTSDRWELKRQIEDLIQDDYFKKFVGKPRTSSAEKKE 315
BLAST of Moc03g01610 vs. ExPASy TrEMBL
Match:
A0A6J1DPC9 (uncharacterized protein LOC111022280 OS=Momordica charantia OX=3673 GN=LOC111022280 PE=4 SV=1)
HSP 1 Score: 192.6 bits (488), Expect = 2.0e-45
Identity = 152/386 (39.38%), Postives = 174/386 (45.08%), Query Frame = 0
Query: 42 ENRFDEQVEALKAK-----------------------------------------SKDPK 101
++RFDEQVEALKA+ SKDPK
Sbjct: 93 KHRFDEQVEALKARCEKKESPFDDDDLGESPFTSDIMEAPIPPKFKTPTMKPYDGSKDPK 152
Query: 102 DYVEVFEDLMDFQAASDAINYQAFQIALTGSAR------PC------------------- 161
DYVEVFE LMDFQAA+DAI AFQIALTGSAR P
Sbjct: 153 DYVEVFEGLMDFQAATDAIKCLAFQIALTGSARLWCRRLPARSISTYSQLRKEFIGQFSF 212
Query: 162 ----------------LVNETLKVKLGEEALSTFVEVLQKANKVIDGQELLRTK------ 221
+ETL VKLGEEA +TF EVLQ A KVIDGQELLRTK
Sbjct: 213 RHYDRKTATHLATIRQKEDETLTVKLGEEAPATFAEVLQNAKKVIDGQELLRTKTDRPEK 272
Query: 222 -LGQTDLGPTRESQEAKTKE---------------------------------------- 254
+ Q L + ++K+K+
Sbjct: 273 QIDQKRLSQKKRKDDSKSKDKGSSSSGSRTEYRRSESGPSRSRPYERCWELKRQIEDLIQ 332
BLAST of Moc03g01610 vs. ExPASy TrEMBL
Match:
A0A6J1DPN4 (uncharacterized protein LOC111023060 OS=Momordica charantia OX=3673 GN=LOC111023060 PE=4 SV=1)
HSP 1 Score: 190.3 bits (482), Expect = 1.0e-44
Identity = 138/328 (42.07%), Postives = 158/328 (48.17%), Query Frame = 0
Query: 56 SKDPKDYVEVFEDLMDFQAASDAINYQAFQIALTGSAR---------------------- 115
SKDPKDYVEVFE LMDFQAA+DAI +AFQIALTGSAR
Sbjct: 163 SKDPKDYVEVFEGLMDFQAATDAIKCRAFQIALTGSARLWYRRLPARSISTYSQLRKEFI 222
Query: 116 ------------------------------------------------------PCLVNE 175
L +E
Sbjct: 223 SQFFSRHYDRKTTTHLATIRQKEGKTLKEYITRFQEEQLKVVHCSDDSSMCYFLTGLADE 282
Query: 176 TLKVKLGEEALSTFVEVLQKANKVIDGQELLRTK-------LGQTDLGPTRESQEAKTKE 235
T VKLGEEAL+TF EVLQ K IDGQELLRTK + Q + ++K+K+
Sbjct: 283 TPTVKLGEEALATFAEVLQMEKKFIDGQELLRTKTDRPEKQIDQKKSSQDKRKADSKSKD 342
Query: 236 ---------------------------------------------SPSRGHSRNKRKELA 254
PS G S NKRKELA
Sbjct: 343 KGSSSSNSRTDYCRSNSVEKKEERKRSRTPPRLDDRPAVINTIFGGPSGGQSGNKRKELA 402
BLAST of Moc03g01610 vs. ExPASy TrEMBL
Match:
A0A6J1D8C0 (uncharacterized protein LOC111018561 OS=Momordica charantia OX=3673 GN=LOC111018561 PE=4 SV=1)
HSP 1 Score: 189.1 bits (479), Expect = 2.2e-44
Identity = 135/293 (46.08%), Postives = 158/293 (53.92%), Query Frame = 0
Query: 42 ENRFDEQVEALKAKSKDP---KDYVEVF-EDLMDFQAASDAINYQAFQIALTGSARPCLV 101
++RFDEQVEALK + K+ K+YV F E+ + SD A LTG L
Sbjct: 81 KHRFDEQVEALKVRHKEGETLKEYVTRFQEEQLKVAHCSDD---SAMCYFLTG-----LA 140
Query: 102 NETLKVKLGEEALSTFVEVLQKANKVIDGQELLRTKLG-------QTDLGPTRESQEAKT 161
+ETL VKLGEEA +TF EVLQKA KVIDGQELLRTK G Q L + ++K
Sbjct: 141 DETLTVKLGEEAPATFAEVLQKAKKVIDGQELLRTKTGRPEKQIDQKKLNQEKRKVDSKP 200
Query: 162 KE---------------------------------------------------------- 221
K+
Sbjct: 201 KDKGSSSSVSRIDCWELKRQIEDLIQDGYFKKFVGKPRFNSVEKKEERKRSRTPPRRDDR 260
Query: 222 ---------SPSRGHSRNKRKELAREAQREVF--QEHKPTCPISFSDSDLEGMHLPHNDT 255
PS G S NKRKEL REA+REVF +E + TC I+F D+DLEG+HLPHND
Sbjct: 261 PAVINTIFGGPSGGQSGNKRKELVREARREVFIIREQRSTCSITFDDTDLEGVHLPHNDA 320
BLAST of Moc03g01610 vs. ExPASy TrEMBL
Match:
A0A6J1DTB6 (uncharacterized protein LOC111022955 OS=Momordica charantia OX=3673 GN=LOC111022955 PE=4 SV=1)
HSP 1 Score: 187.6 bits (475), Expect = 6.5e-44
Identity = 150/383 (39.16%), Postives = 160/383 (41.78%), Query Frame = 0
Query: 56 SKDPKDYVEVFEDLMDFQAASDAINYQAFQIALTGSAR---------------------- 115
SKDPKDYVEVFE LMDFQA SDAI +A IALTGSAR
Sbjct: 7 SKDPKDYVEVFEGLMDFQAMSDAIKCRAIPIALTGSARLWYRRLLARLISTYSQLRKEFI 66
Query: 116 -------------------------------PCLVNETLKVKLGEEALSTFVEVLQKANK 175
E LKVKLGEEA STFVEVLQKA K
Sbjct: 67 SQFSFRHYDRKTATHLATIQQKEGETLREYVTRFQEEQLKVKLGEEAPSTFVEVLQKAKK 126
Query: 176 VIDGQELLRTKLGQTDL--------GPTRESQEAKTKE---------------------- 235
VIDGQELLRTKLG TD G + + K+K+
Sbjct: 127 VIDGQELLRTKLGLTDKRFDQRKSGGQDKGKSDPKSKDKGSSSQPSKGRSDYRRSDSDSN 186
Query: 236 ------------------------------------------------------------ 247
Sbjct: 187 RRGSYERYTPTIIPISDILTNIEENGLEKLFKHSKDRYCRFRRDHGHDTSSCWELKCQIE 246
BLAST of Moc03g01610 vs. ExPASy TrEMBL
Match:
A0A6J1D9E1 (uncharacterized protein LOC111018823 OS=Momordica charantia OX=3673 GN=LOC111018823 PE=4 SV=1)
HSP 1 Score: 182.6 bits (462), Expect = 2.1e-42
Identity = 144/366 (39.34%), Postives = 163/366 (44.54%), Query Frame = 0
Query: 56 SKDPKDYVEVFEDLMDFQAASDAINYQAFQIALTGSAR---------------------- 115
SKDPKDYVEVFE LMDFQAASDAI +AFQIALTGSAR
Sbjct: 76 SKDPKDYVEVFEGLMDFQAASDAIKCRAFQIALTGSARLWFQEDQLKVAQSSDDSAMCYF 135
Query: 116 -PCLVNETLKVKLGEEALSTFVEVLQKANKVIDGQELLRTKLG---------------QT 175
L +E L VKLG+EA +TF EVLQKA KVIDGQELLRTK G +
Sbjct: 136 LTGLADEALTVKLGKEAPATFAEVLQKAKKVIDGQELLRTKTGRPERGIDRGRSGKDEKA 195
Query: 176 DL--------------------GPTR---------------------------------- 235
DL GPTR
Sbjct: 196 DLKSKDKGSFSSGRAEFRRAVNGPTRSRPYERFTPTTIPISEILTNIEESGMEKLLKRPE 255
Query: 236 ---------------------------------------------------ESQEAKTKE 254
+ A+ KE
Sbjct: 256 KLRGAPERRNKDKYCRFHREHDHNTSDRWELKRQIEDLIQDDYFKKFVGKPRTSSAEKKE 315
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DPC9 | 2.0e-45 | 39.38 | uncharacterized protein LOC111022280 OS=Momordica charantia OX=3673 GN=LOC111022... | [more] |
A0A6J1DPN4 | 1.0e-44 | 42.07 | uncharacterized protein LOC111023060 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
A0A6J1D8C0 | 2.2e-44 | 46.08 | uncharacterized protein LOC111018561 OS=Momordica charantia OX=3673 GN=LOC111018... | [more] |
A0A6J1DTB6 | 6.5e-44 | 39.16 | uncharacterized protein LOC111022955 OS=Momordica charantia OX=3673 GN=LOC111022... | [more] |
A0A6J1D9E1 | 2.1e-42 | 39.34 | uncharacterized protein LOC111018823 OS=Momordica charantia OX=3673 GN=LOC111018... | [more] |
Match Name | E-value | Identity | Description | |