Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTGACAGGGGAAACAAGCGAAGTTTCATTTGCATCTCATCGTCGTCAGACGACGACGACGACGAGGACGAGGTCTCCTGTGGCGACGACGAAGAGGAATCAGATGAGCAGTATGATGAAGAAGACGATGACGAAGGGGAATCGGAAGAGGAGTACGATAATGAGGGCAGCGACGACGATTGTGACGACGTTCTCTCCGAGCGAGTTATCCGATTTCTAAAAGGTAATGTCAGATCGTTTCTTCTAATTCCTTTAATCAATCGTCATCGTATTAGAATTTGAGTCCACTCCAGAAGCGTCAATTTAGAAAACTGAATCGATGACTGGAACGATGATTTTCGGTCATTATTGGAATCCATCTGTTCAAGTTTGCTAAAGGTTTGTTGATTAATTCGTATGATATTTGATTTCTCAGAGGACGAGTAAAGAATTTGATTTTCAAAGAAGTCATTTATAAGCCTTAATCCATCCTTGCCTGTTTTCTATTGTGCTCTGTCGCAGAGAATAAAAATTTGGATTCATTGACACTTAAAGACTGCAAAGCTTATTTACGGGAGAATGGGTTGAGAATAGCAGGGACTAAATCCGTCTGTATTCAAAGAATCAGGGAGCATTGGAGGTACGTGGATTCATAATCTTGAGAGTCTGAGACTCAAGATCAAGATCGCCAATATTGCGTCTATCTATATCTAGTGCGGTTGCTGAAATATTTGAAATTGTTAGTACTTGTTCATGTTGGTAATCTGCCAGATAATCATCTATGTTGGTTTATTAACCTCTATGGAACTCTTTTTATATATTGAAATGTCCCAGTCAATGTTGGTCGATATCCTTTATAATCCTCTAGACTACAGTAGATGGAAAATTGAAGATTTTTGAGATAAATGGTATGTTGAGAAATTTTCACATCCATTTATGGATTGTTTCTCTTTCCTTGCCCCTTGAAGGTTTTTGAAATCTATAACTTCAAGTTATGCATTCAAAGCATATCAAATTGAAAGGAAGCAACATAATTTGAGCTTGTGCCTTTTTTTTCCCCTCCCCTTTCAGTACTTAGTTTACATTTATTACCCACAAAGTTCTTGTTTAATTGATCGTAATGCTATGAATTCGTTCTTGCTATTTTCTTTTTGGGTCTCTGCAAAGTTGCATTATTATGTAAAACTTCTTTGCTTGTTAATTTTTTCTTCTCAGGATGAAAGATGAAAATGGTGAAGCACAGTATCCAAGGTCATCCTTTGTTGTCAATTGCACTGGTAATCTCTTTGTTCATTTGTCATAGCATTTTCACTCTTCTTTGGTCCCTTTACTGGGTATAATCATTCAAGTGAAACATTAAATGCAGGTGATGTTTGTAGGGGAGATGTTGTTTTGTTCACTCAGAAAGTTTATGCAAAGTACCCAAACAACTTACCCTTCCACCACTATTCTTGTGTGCGATATTTTTGACCAGATTCCTAATTCTTGTAAATTTTTTTAATAGGTTTGATAAAGTAACTAGGCATGGAGGGCTTATAGGAAAGAGAACTGTAGCAGGGAGAGTAGTTAAGGAGAGCTATGGTGCAACCAAACAGCAGCATACTTTTACAGTAAGGTTGCTTTATCTGGTCTAGTAATTCTTTTTCTCGTCGATATTTCTACTTCCAATTGGTTATGAATTTTCAGCCACATTTTTTTTTAAATTGGATAATTTATTTATATATAACATTCACCACAATGATTTAAGTGGTAGCAATGAGTAACAAATGAACTCATGCATTTTGCCTTTCTTTGTTCCTTTGCTTTTCTATTCATTACATATATATTTTCTTTTGTGACTAATGTTTTCCTGTTACTTGGGATTGTACTGTGCTAGGTCGAAGTTTTATGGAGCAGGGGAGTTAGGAAATTACCCCCACTTTATCCTCTGCTCGTGAAGGGTCGAAATCTATATAAACTAAGAACTTTTAGACAGGTAAGTTCTCATTGTATTTAAAATCATTTTCATACAAAGCATGTGGGATAGGAGGATTTGACCCATGGATGAAAACTTTAATTCAAATTGATTTTGTCAACTGTGCCATTGTTGAAGTGTATGTAACTATGAAATTAGTAACAATGTTACTGTGTCTTACATTCTCAAATCTCAAGTATGGAATGAGTGAGTGTTCCAACATTTCCAAATTTATATGAAAGGGCTAGCTCTACAAACATGAAATCATTAAAGTTAGTATTAGTCAGGTCTGGTTGATAAACGACAAATGTGACCTAATGAAGTTTGCAGGTGAGTTTCATATCCAATTAGATACATTTCATTGGATTTTGGTGGAATTTATTGAGATATCAAGTAATTTAGTTCTTAAACTTTTAGGCTTGTGTCTAATAGATCCCTGAAATTTAAAATCATTGAATAGGTTCCTGAAATTTTGTGGGGGAGGAAAGGGGGTCGTACACAAAAGTGAAAGTTTAAGGATCTCTCGGAAAATTTTATAAGTTTTGGACAGCTTAAAAGTTTAGAAATCTATTAGACACAAAATTTAAGTTTAGGATTTAGAAGACATTTTTTTAAACTTCAGAGACCTAAACGCAAACTTAAAACTGTTGGGACTACCTTTGTAATTTAACCTATATCGTTTTAGCCATGAGGTTTGATGAAGAACTTGTGCTTGCTTCTCTTCCCTATTTTAGGTCTCACCTATTTTATGTGTATGTTCTGCTCCCCCTCTCTTTAGCTTTGGAATGATGAAGCAGAAAGACTTCAAGTTCTTGCCGAAAAGCACAAAAGAGGTGCGGCTGCTCGGAGTTTACGAGCAATGCGGACAAGGAAAATAAATTTTCTTCAAACAGAAGGTAAAGTTTCCACCCCCACCCCCACCCCCCATATAAAGAAAATAAGCTTGCTTTAATGGAAGAAGAGAAGATTGAATGTTACCATCTTTTTCCCTTGTAACTATTAGGAGGTGTAAAAAATCAAAGACATTTCCATCCTGCAAGACAAACCTTGAACAGTAAAGAGAGCAGCAAGAGGATGCAGTCAAAGGGCAAGAACAAGGTTCTACGTAGACATCCAACATAG
mRNA sequence
ATGACTGACAGGGGAAACAAGCGAAGTTTCATTTGCATCTCATCGTCGTCAGACGACGACGACGACGAGGACGAGGTCTCCTGTGGCGACGACGAAGAGGAATCAGATGAGCAGTATGATGAAGAAGACGATGACGAAGGGGAATCGGAAGAGGAGTACGATAATGAGGGCAGCGACGACGATTGTGACGACGTTCTCTCCGAGCGAGTTATCCGATTTCTAAAAGAGAATAAAAATTTGGATTCATTGACACTTAAAGACTGCAAAGCTTATTTACGGGAGAATGGGTTGAGAATAGCAGGGACTAAATCCGTCTGTATTCAAAGAATCAGGGAGCATTGGAGGATGAAAGATGAAAATGGTGAAGCACAGTATCCAAGGTCATCCTTTGTTGTCAATTGCACTGGTGATGTTTGTAGGGGAGATGTTGTTTTGTTCACTCAGAAAGTTTATGCAAAGTTTGATAAAGTAACTAGGCATGGAGGGCTTATAGGAAAGAGAACTGTAGCAGGGAGAGTAGTTAAGGAGAGCTATGGTGCAACCAAACAGCAGCATACTTTTACAGTCGAAGTTTTATGGAGCAGGGGAGTTAGGAAATTACCCCCACTTTATCCTCTGCTCGTGAAGGGTCGAAATCTATATAAACTAAGAACTTTTAGACAGCTTTGGAATGATGAAGCAGAAAGACTTCAAGTTCTTGCCGAAAAGCACAAAAGAGGTGCGGCTGCTCGGAGTTTACGAGCAATGCGGACAAGGAAAATAAATTTTCTTCAAACAGAAGGAGGTGTAAAAAATCAAAGACATTTCCATCCTGCAAGACAAACCTTGAACAGTAAAGAGAGCAGCAAGAGGATGCAGTCAAAGGGCAAGAACAAGGTTCTACGTAGACATCCAACATAG
Coding sequence (CDS)
ATGACTGACAGGGGAAACAAGCGAAGTTTCATTTGCATCTCATCGTCGTCAGACGACGACGACGACGAGGACGAGGTCTCCTGTGGCGACGACGAAGAGGAATCAGATGAGCAGTATGATGAAGAAGACGATGACGAAGGGGAATCGGAAGAGGAGTACGATAATGAGGGCAGCGACGACGATTGTGACGACGTTCTCTCCGAGCGAGTTATCCGATTTCTAAAAGAGAATAAAAATTTGGATTCATTGACACTTAAAGACTGCAAAGCTTATTTACGGGAGAATGGGTTGAGAATAGCAGGGACTAAATCCGTCTGTATTCAAAGAATCAGGGAGCATTGGAGGATGAAAGATGAAAATGGTGAAGCACAGTATCCAAGGTCATCCTTTGTTGTCAATTGCACTGGTGATGTTTGTAGGGGAGATGTTGTTTTGTTCACTCAGAAAGTTTATGCAAAGTTTGATAAAGTAACTAGGCATGGAGGGCTTATAGGAAAGAGAACTGTAGCAGGGAGAGTAGTTAAGGAGAGCTATGGTGCAACCAAACAGCAGCATACTTTTACAGTCGAAGTTTTATGGAGCAGGGGAGTTAGGAAATTACCCCCACTTTATCCTCTGCTCGTGAAGGGTCGAAATCTATATAAACTAAGAACTTTTAGACAGCTTTGGAATGATGAAGCAGAAAGACTTCAAGTTCTTGCCGAAAAGCACAAAAGAGGTGCGGCTGCTCGGAGTTTACGAGCAATGCGGACAAGGAAAATAAATTTTCTTCAAACAGAAGGAGGTGTAAAAAATCAAAGACATTTCCATCCTGCAAGACAAACCTTGAACAGTAAAGAGAGCAGCAAGAGGATGCAGTCAAAGGGCAAGAACAAGGTTCTACGTAGACATCCAACATAG
Protein sequence
MTDRGNKRSFICISSSSDDDDDEDEVSCGDDEEESDEQYDEEDDDEGESEEEYDNEGSDDDCDDVLSERVIRFLKENKNLDSLTLKDCKAYLRENGLRIAGTKSVCIQRIREHWRMKDENGEAQYPRSSFVVNCTGDVCRGDVVLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKESYGATKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRQLWNDEAERLQVLAEKHKRGAAARSLRAMRTRKINFLQTEGGVKNQRHFHPARQTLNSKESSKRMQSKGKNKVLRRHPT
Homology
BLAST of Moc02g13980 vs. NCBI nr
Match:
XP_022158231.1 (zinc finger CCCH domain-containing protein 62 [Momordica charantia])
HSP 1 Score: 575.1 bits (1481), Expect = 3.5e-160
Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 0
Query: 1 MTDRGNKRSFICISSSSDDDDDEDEVSCGDDEEESDEQYDEEDDDEGESEEEYDNEGSDD 60
MTDRGNKRSFICISSSSDDDDDEDEVSCGDDEEESDEQYDEEDDDEGESEEEYDNEGSDD
Sbjct: 1 MTDRGNKRSFICISSSSDDDDDEDEVSCGDDEEESDEQYDEEDDDEGESEEEYDNEGSDD 60
Query: 61 DCDDVLSERVIRFLKENKNLDSLTLKDCKAYLRENGLRIAGTKSVCIQRIREHWRMKDEN 120
DCDDVLSERVIRFLKENKNLDSLTLKDCKAYLRENGLRIAGTKSVCIQRIREHWRMKDEN
Sbjct: 61 DCDDVLSERVIRFLKENKNLDSLTLKDCKAYLRENGLRIAGTKSVCIQRIREHWRMKDEN 120
Query: 121 GEAQYPRSSFVVNCTGDVCRGDVVLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKESYGA 180
GEAQYPRSSFVVNCTGDVCRGDVVLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKESYGA
Sbjct: 121 GEAQYPRSSFVVNCTGDVCRGDVVLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKESYGA 180
Query: 181 TKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRQLWNDEAERLQVLAEKHKRG 240
TKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRQLWNDEAERLQVLAEKHKRG
Sbjct: 181 TKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRQLWNDEAERLQVLAEKHKRG 240
Query: 241 AAARSLRAMRTRKINFLQTEGGVKNQRHFHPARQTLNSKESSKRMQSKGKNKVLRRHPT 300
AAARSLRAMRTRKINFLQTEGGVKNQRHFHPARQTLNSKESSKRMQSKGKNKVLRRHPT
Sbjct: 241 AAARSLRAMRTRKINFLQTEGGVKNQRHFHPARQTLNSKESSKRMQSKGKNKVLRRHPT 299
BLAST of Moc02g13980 vs. NCBI nr
Match:
XP_038902878.1 (zinc finger CCCH domain-containing protein 62-like [Benincasa hispida])
HSP 1 Score: 435.3 bits (1118), Expect = 4.4e-118
Identity = 239/315 (75.87%), Postives = 257/315 (81.59%), Query Frame = 0
Query: 4 RGNKRSFICISSSSDDDDDEDEVSCGDDEE-------------ESDEQYDEEDDD----- 63
+ +KR ICISSSSDDD +SCGDDEE ES+E++D+EDDD
Sbjct: 3 KSSKRRVICISSSSDDD-----ISCGDDEEKSEEYDDQDDADWESEEEFDDEDDDDGDSE 62
Query: 64 ---------EGESEEEYDNEGSDDDCDDVLSERVIRFLKENKNLDSLTLKDCKAYLRENG 123
EGESEEE+DNE SD+DCD+VLSERVIRFLKENKNLDSLTL DCKAYLREN
Sbjct: 63 EEFDYKDDVEGESEEEFDNEDSDNDCDEVLSERVIRFLKENKNLDSLTLNDCKAYLRENR 122
Query: 124 LRIAGTKSVCIQRIREHWRMKDENGEAQYPRSSFVVNCTGDVCRGDVVLFTQKVYAKFDK 183
LRIAGTK+VCIQR+ EHWRMKD NGEA YPRSSFVVNCTGDVCRGD VLFTQKVYAKFDK
Sbjct: 123 LRIAGTKAVCIQRVEEHWRMKDGNGEAHYPRSSFVVNCTGDVCRGDTVLFTQKVYAKFDK 182
Query: 184 VTRHGGLIGKRTVAGRVVKESYGATKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKL 243
VTRHGGLIGKRTVAGRVVKESYGA+KQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKL
Sbjct: 183 VTRHGGLIGKRTVAGRVVKESYGASKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKL 242
Query: 244 RTFRQLWNDEAERLQVLAEKHKRGAAARSLRAMRTRKINFLQTEGGVKNQRHFHPARQTL 292
RTFR+LWNDEAER+QVLAEKHKRGAAAR LRAM+ +K F QT G KNQ H H ARQ L
Sbjct: 243 RTFRRLWNDEAERVQVLAEKHKRGAAARGLRAMQKKKRKFPQTRGCAKNQGHVHLARQGL 302
BLAST of Moc02g13980 vs. NCBI nr
Match:
XP_023512636.1 (zinc finger CCCH domain-containing protein 62 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 428.7 bits (1101), Expect = 4.1e-116
Identity = 229/298 (76.85%), Postives = 253/298 (84.90%), Query Frame = 0
Query: 1 MTDRGNKRSFICISSSSDDDDDEDEVSCGDDEEESDEQYDEEDDDEGESEEEYDNEGSDD 60
M +RG+KR I +SSSS++ DDEEESDE+YD+EDDDEGESEEE+DN SD+
Sbjct: 1 MPERGSKRRVIYLSSSSEE----------DDEEESDEEYDDEDDDEGESEEEFDNGCSDN 60
Query: 61 DCDDVLSERVIRFLKENKNLDSLTLKDCKAYLRENGLRIAGTKSVCIQRIREHWRMKDEN 120
DCD+VLS+RVIRFLKENKNLDSLTL DCKAYLREN LRIAGTK+VCIQR++EHWRMKD N
Sbjct: 61 DCDEVLSQRVIRFLKENKNLDSLTLNDCKAYLRENRLRIAGTKAVCIQRLQEHWRMKDGN 120
Query: 121 GEAQYPRSSFVVNCTGDVCRGDVVLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKESYGA 180
GEA YPRSSFVVNCTGDVCRGD VLFTQKVYAKFDKVTR GGLIGKRTVAGRVVKESYGA
Sbjct: 121 GEAHYPRSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRRGGLIGKRTVAGRVVKESYGA 180
Query: 181 TKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRQLWNDEAERLQVLAEKHKRG 240
+KQQHTFTVEVLWS GVRKLPPLYPLLVKGRNLYKLRTFR+LWNDEAER+QVLAEKHKRG
Sbjct: 181 SKQQHTFTVEVLWSTGVRKLPPLYPLLVKGRNLYKLRTFRRLWNDEAERVQVLAEKHKRG 240
Query: 241 AAARSLRAMRTRKINFLQTEGGVKNQRHFHPARQTLNSKESSKRMQSKGKNKVLRRHP 299
AAAR +RA++ RK +Q G KNQ H RQ LNS S K M+S+ KN +RRHP
Sbjct: 241 AAARGVRALQKRKRKLVQIGGSGKNQGHVQLPRQALNSNGSRKSMRSRDKNNAVRRHP 288
BLAST of Moc02g13980 vs. NCBI nr
Match:
KGN62051.1 (hypothetical protein Csa_006128 [Cucumis sativus])
HSP 1 Score: 425.6 bits (1093), Expect = 3.5e-115
Identity = 227/303 (74.92%), Postives = 259/303 (85.48%), Query Frame = 0
Query: 1 MTDRGNKRSFICISSSSDDDDDEDEVSCGDDEE----ESDEQYDEEDDDEGESEEEYDNE 60
MT RG+KR+ ICISSSS D DE+E DDE+ +S+E++D++DDDEGES EE+DNE
Sbjct: 1 MTKRGSKRTVICISSSSSSDADEEESEEYDDEDDGVGDSEEEFDDKDDDEGESGEEFDNE 60
Query: 61 GSDDDCDDVLSERVIRFLKENKNLDSLTLKDCKAYLRENGLRIAGTKSVCIQRIREHWRM 120
SD+ CD+VLS+RVIRFLKENKNLDSLTL DCKAYLRE+ LRIAGTK+VCIQR++EHWR+
Sbjct: 61 ESDNGCDEVLSKRVIRFLKENKNLDSLTLNDCKAYLRESRLRIAGTKAVCIQRVKEHWRL 120
Query: 121 KDENGEAQYPRSSFVVNCTGDVCRGDVVLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKE 180
K+ NGE QYP+SSFVVNCTGDVCRGD VLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKE
Sbjct: 121 KNGNGEVQYPKSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKE 180
Query: 181 SYGATKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRQLWNDEAERLQVLAEK 240
SYGA+KQQHTFTVEVLWSRGVRKL PLYPLLVKGRNLYKLRTFR LWNDEAER+Q LAEK
Sbjct: 181 SYGASKQQHTFTVEVLWSRGVRKLRPLYPLLVKGRNLYKLRTFRLLWNDEAERVQALAEK 240
Query: 241 HKRGAAARSLRAMRTRKINFLQTEGGVKNQRHFHPARQTLNSKESSKRMQSKGKNKVLRR 300
H+RG AAR LRAM+ +K +QT+G +NQ H H ARQ L SKE +RM S+ N V+RR
Sbjct: 241 HRRGVAARGLRAMQKKKRKTIQTKGCAENQGHVHLARQPLKSKEKRQRMPSRDNNNVVRR 300
BLAST of Moc02g13980 vs. NCBI nr
Match:
XP_022971662.1 (zinc finger CCCH domain-containing protein 62 isoform X1 [Cucurbita maxima])
HSP 1 Score: 425.2 bits (1092), Expect = 4.5e-115
Identity = 227/298 (76.17%), Postives = 251/298 (84.23%), Query Frame = 0
Query: 1 MTDRGNKRSFICISSSSDDDDDEDEVSCGDDEEESDEQYDEEDDDEGESEEEYDNEGSDD 60
M +RG+KR + + SSS+ DDEEESDE+YD+EDDDEGESE+E+DNE SD+
Sbjct: 1 MPERGSKRRVVYLYSSSE-----------DDEEESDEEYDDEDDDEGESEKEFDNECSDN 60
Query: 61 DCDDVLSERVIRFLKENKNLDSLTLKDCKAYLRENGLRIAGTKSVCIQRIREHWRMKDEN 120
DCD+VLS+RVIRFLKENKNLDSLTL DCKAYLREN LRIAGTK+VCIQR++EHWRMKD N
Sbjct: 61 DCDEVLSQRVIRFLKENKNLDSLTLHDCKAYLRENRLRIAGTKAVCIQRLQEHWRMKDGN 120
Query: 121 GEAQYPRSSFVVNCTGDVCRGDVVLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKESYGA 180
GE YPRSSFVVNCTGDVCRGD VLFTQKVYAKFDKVTR GGLIGKRTVAGRVVKESYGA
Sbjct: 121 GEVHYPRSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRRGGLIGKRTVAGRVVKESYGA 180
Query: 181 TKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRQLWNDEAERLQVLAEKHKRG 240
+KQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFR+LWNDEAER+QVLAEKHKRG
Sbjct: 181 SKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRRLWNDEAERIQVLAEKHKRG 240
Query: 241 AAARSLRAMRTRKINFLQTEGGVKNQRHFHPARQTLNSKESSKRMQSKGKNKVLRRHP 299
AAAR +RA++ RK LQ G KNQ RQ LNS S K M+S+ KN +RRHP
Sbjct: 241 AAARGVRALQKRKRKLLQIGGSGKNQGRAQLPRQALNSNGSRKSMRSRDKNNAVRRHP 287
BLAST of Moc02g13980 vs. ExPASy Swiss-Prot
Match:
Q338N2 (Zinc finger CCCH domain-containing protein 62 OS=Oryza sativa subsp. japonica OX=39947 GN=Os10g0391300 PE=4 SV=2)
HSP 1 Score: 167.9 bits (424), Expect = 1.7e-40
Identity = 128/328 (39.02%), Postives = 167/328 (50.91%), Query Frame = 0
Query: 18 DDDDDEDEVSCGDDEEESDEQYD--EEDDDEGES--------EEEYDN------EGSDDD 77
+++ E+EV D+EEE E YD EEDD E S YD+ D +
Sbjct: 24 EEEGSEEEVESDDEEEEEGEGYDWSEEDDPEAASLAGICDPDAGSYDDPTFDPAADGDLE 83
Query: 78 CDDVLSERVIRF------------------------------LKENKNLDSLTLKDCKAY 137
D VL R+ R L + L+ L + +CKAY
Sbjct: 84 VDAVLRSRMARMSLSSARKDRKGSRMPKMGKEEMDLLAMVDKLMHDGQLEKLKVYECKAY 143
Query: 138 LRENGLRIAGTKSVCIQRIREHWRMKDENGEAQYPRSSFVVNCTGDVCRGDVVLFTQKVY 197
LR + LR++G K V + RIR +K GE +YP SSFV+NC GD C+GDVV+F Q +Y
Sbjct: 144 LRMHKLRLSGNKEVLLTRIRGQIEVK-TMGEVKYPVSSFVLNCQGDSCKGDVVVFEQNIY 203
Query: 198 AKFDKVTR--HGGLIGKRTVAGRVVKESYGATKQQHTFTVEVLWSRGVRKLPPLYPLLVK 257
+ R G L G+RT AGR++KESYG KQQHTFT+E+LWSRG + PPL+PLL+K
Sbjct: 204 KRKKGAPRGVKGHLCGQRTNAGRIIKESYGTKKQQHTFTIEILWSRGYKPWPPLHPLLIK 263
Query: 258 GRNLYKLRTFRQLWNDEAERLQVLAEKHKRGAAARSLRAMRTRKINFLQTEGGVKNQRHF 298
GRNLYK +T RQ W DE ER + L EKH RG AR R +R + +N+R
Sbjct: 264 GRNLYKDKTMRQPWLDEEERNRALQEKHARGYVARKTREVRIK---------DKENERMR 323
BLAST of Moc02g13980 vs. ExPASy TrEMBL
Match:
A0A6J1E0C9 (zinc finger CCCH domain-containing protein 62 OS=Momordica charantia OX=3673 GN=LOC111024763 PE=4 SV=1)
HSP 1 Score: 575.1 bits (1481), Expect = 1.7e-160
Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 0
Query: 1 MTDRGNKRSFICISSSSDDDDDEDEVSCGDDEEESDEQYDEEDDDEGESEEEYDNEGSDD 60
MTDRGNKRSFICISSSSDDDDDEDEVSCGDDEEESDEQYDEEDDDEGESEEEYDNEGSDD
Sbjct: 1 MTDRGNKRSFICISSSSDDDDDEDEVSCGDDEEESDEQYDEEDDDEGESEEEYDNEGSDD 60
Query: 61 DCDDVLSERVIRFLKENKNLDSLTLKDCKAYLRENGLRIAGTKSVCIQRIREHWRMKDEN 120
DCDDVLSERVIRFLKENKNLDSLTLKDCKAYLRENGLRIAGTKSVCIQRIREHWRMKDEN
Sbjct: 61 DCDDVLSERVIRFLKENKNLDSLTLKDCKAYLRENGLRIAGTKSVCIQRIREHWRMKDEN 120
Query: 121 GEAQYPRSSFVVNCTGDVCRGDVVLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKESYGA 180
GEAQYPRSSFVVNCTGDVCRGDVVLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKESYGA
Sbjct: 121 GEAQYPRSSFVVNCTGDVCRGDVVLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKESYGA 180
Query: 181 TKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRQLWNDEAERLQVLAEKHKRG 240
TKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRQLWNDEAERLQVLAEKHKRG
Sbjct: 181 TKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRQLWNDEAERLQVLAEKHKRG 240
Query: 241 AAARSLRAMRTRKINFLQTEGGVKNQRHFHPARQTLNSKESSKRMQSKGKNKVLRRHPT 300
AAARSLRAMRTRKINFLQTEGGVKNQRHFHPARQTLNSKESSKRMQSKGKNKVLRRHPT
Sbjct: 241 AAARSLRAMRTRKINFLQTEGGVKNQRHFHPARQTLNSKESSKRMQSKGKNKVLRRHPT 299
BLAST of Moc02g13980 vs. ExPASy TrEMBL
Match:
A0A0A0LQ19 (SAP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G292810 PE=4 SV=1)
HSP 1 Score: 425.6 bits (1093), Expect = 1.7e-115
Identity = 227/303 (74.92%), Postives = 259/303 (85.48%), Query Frame = 0
Query: 1 MTDRGNKRSFICISSSSDDDDDEDEVSCGDDEE----ESDEQYDEEDDDEGESEEEYDNE 60
MT RG+KR+ ICISSSS D DE+E DDE+ +S+E++D++DDDEGES EE+DNE
Sbjct: 1 MTKRGSKRTVICISSSSSSDADEEESEEYDDEDDGVGDSEEEFDDKDDDEGESGEEFDNE 60
Query: 61 GSDDDCDDVLSERVIRFLKENKNLDSLTLKDCKAYLRENGLRIAGTKSVCIQRIREHWRM 120
SD+ CD+VLS+RVIRFLKENKNLDSLTL DCKAYLRE+ LRIAGTK+VCIQR++EHWR+
Sbjct: 61 ESDNGCDEVLSKRVIRFLKENKNLDSLTLNDCKAYLRESRLRIAGTKAVCIQRVKEHWRL 120
Query: 121 KDENGEAQYPRSSFVVNCTGDVCRGDVVLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKE 180
K+ NGE QYP+SSFVVNCTGDVCRGD VLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKE
Sbjct: 121 KNGNGEVQYPKSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKE 180
Query: 181 SYGATKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRQLWNDEAERLQVLAEK 240
SYGA+KQQHTFTVEVLWSRGVRKL PLYPLLVKGRNLYKLRTFR LWNDEAER+Q LAEK
Sbjct: 181 SYGASKQQHTFTVEVLWSRGVRKLRPLYPLLVKGRNLYKLRTFRLLWNDEAERVQALAEK 240
Query: 241 HKRGAAARSLRAMRTRKINFLQTEGGVKNQRHFHPARQTLNSKESSKRMQSKGKNKVLRR 300
H+RG AAR LRAM+ +K +QT+G +NQ H H ARQ L SKE +RM S+ N V+RR
Sbjct: 241 HRRGVAARGLRAMQKKKRKTIQTKGCAENQGHVHLARQPLKSKEKRQRMPSRDNNNVVRR 300
BLAST of Moc02g13980 vs. ExPASy TrEMBL
Match:
A0A6J1I2K8 (zinc finger CCCH domain-containing protein 62 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470342 PE=4 SV=1)
HSP 1 Score: 425.2 bits (1092), Expect = 2.2e-115
Identity = 227/298 (76.17%), Postives = 251/298 (84.23%), Query Frame = 0
Query: 1 MTDRGNKRSFICISSSSDDDDDEDEVSCGDDEEESDEQYDEEDDDEGESEEEYDNEGSDD 60
M +RG+KR + + SSS+ DDEEESDE+YD+EDDDEGESE+E+DNE SD+
Sbjct: 1 MPERGSKRRVVYLYSSSE-----------DDEEESDEEYDDEDDDEGESEKEFDNECSDN 60
Query: 61 DCDDVLSERVIRFLKENKNLDSLTLKDCKAYLRENGLRIAGTKSVCIQRIREHWRMKDEN 120
DCD+VLS+RVIRFLKENKNLDSLTL DCKAYLREN LRIAGTK+VCIQR++EHWRMKD N
Sbjct: 61 DCDEVLSQRVIRFLKENKNLDSLTLHDCKAYLRENRLRIAGTKAVCIQRLQEHWRMKDGN 120
Query: 121 GEAQYPRSSFVVNCTGDVCRGDVVLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKESYGA 180
GE YPRSSFVVNCTGDVCRGD VLFTQKVYAKFDKVTR GGLIGKRTVAGRVVKESYGA
Sbjct: 121 GEVHYPRSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRRGGLIGKRTVAGRVVKESYGA 180
Query: 181 TKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRQLWNDEAERLQVLAEKHKRG 240
+KQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFR+LWNDEAER+QVLAEKHKRG
Sbjct: 181 SKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRRLWNDEAERIQVLAEKHKRG 240
Query: 241 AAARSLRAMRTRKINFLQTEGGVKNQRHFHPARQTLNSKESSKRMQSKGKNKVLRRHP 299
AAAR +RA++ RK LQ G KNQ RQ LNS S K M+S+ KN +RRHP
Sbjct: 241 AAARGVRALQKRKRKLLQIGGSGKNQGRAQLPRQALNSNGSRKSMRSRDKNNAVRRHP 287
BLAST of Moc02g13980 vs. ExPASy TrEMBL
Match:
A0A1S4E1S9 (zinc finger CCCH domain-containing protein 62-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497448 PE=4 SV=1)
HSP 1 Score: 418.3 bits (1074), Expect = 2.7e-113
Identity = 231/307 (75.24%), Postives = 257/307 (83.71%), Query Frame = 0
Query: 1 MTDRGNKRSFICISSSSDDD-------DDEDEVSCGDDEEESDEQYD-----EEDDDEGE 60
M+ RG+KR+ ICISSSSDDD DDED+ GD EEE ++ D EEDDDEGE
Sbjct: 30 MSKRGSKRTVICISSSSDDDEEESVEYDDEDD-GVGDSEEEFHDEDDGDVNSEEDDDEGE 89
Query: 61 SEEEYDNEGSDDDCDD-VLSERVIRFLKENKNLDSLTLKDCKAYLRENGLRIAGTKSVCI 120
S EE+D+E SD+ CD+ VLS+RVIRFLKENKNLDSLTL DCKAYLREN LRIAGTK+VCI
Sbjct: 90 SGEEFDDEESDNGCDEGVLSKRVIRFLKENKNLDSLTLNDCKAYLRENRLRIAGTKAVCI 149
Query: 121 QRIREHWRMKDENGEAQYPRSSFVVNCTGDVCRGDVVLFTQKVYAKFDKVTRHGGLIGKR 180
QR++EHWR+KD NGE QYPRSSFVVNCTGDVCRGD VLFTQKVYAKFDKVTRHGGLIGKR
Sbjct: 150 QRVKEHWRLKDGNGEVQYPRSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRHGGLIGKR 209
Query: 181 TVAGRVVKESYGATKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRQLWNDEA 240
TVAGRVVKESYGA+KQQHTFTVEVLW RGVRKLPPLYPLLVKGRNLYKLRTFR+LWNDEA
Sbjct: 210 TVAGRVVKESYGASKQQHTFTVEVLWIRGVRKLPPLYPLLVKGRNLYKLRTFRRLWNDEA 269
Query: 241 ERLQVLAEKHKRGAAARSLRAMRTRKINFLQTEGGVKNQRHFHPARQTLNSKESSKRMQS 295
ER+QVLAEKH+RGAAAR LRAM+ +K +QT+G KNQ H H ARQ L SKE +RM S
Sbjct: 270 ERVQVLAEKHRRGAAARDLRAMQKKKRKIIQTKGCAKNQGHVHLARQPLKSKEKRQRMPS 329
BLAST of Moc02g13980 vs. ExPASy TrEMBL
Match:
A0A1S4E1T3 (zinc finger CCCH domain-containing protein 62-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103497448 PE=4 SV=1)
HSP 1 Score: 417.9 bits (1073), Expect = 3.5e-113
Identity = 232/308 (75.32%), Postives = 257/308 (83.44%), Query Frame = 0
Query: 1 MTDRGNKRSFICISSSSDDD-------DDEDEVSCGDDEEESDEQYD-----EEDDDEGE 60
M+ RG+KR+ ICISSSSDDD DDED+ GD EEE ++ D EEDDDEGE
Sbjct: 30 MSKRGSKRTVICISSSSDDDEEESVEYDDEDD-GVGDSEEEFHDEDDGDVNSEEDDDEGE 89
Query: 61 SEEEYDNEGSDDDCDD-VLSERVIRFLKENKNLDSLTLKDCKAYLRENGLRIAGTKSVCI 120
S EE+D+E SD+ CD+ VLS+RVIRFLKENKNLDSLTL DCKAYLREN LRIAGTK+VCI
Sbjct: 90 SGEEFDDEESDNGCDEGVLSKRVIRFLKENKNLDSLTLNDCKAYLRENRLRIAGTKAVCI 149
Query: 121 QRIREHWRMKDENGEAQYPRSSFVVNCTGDVCRGDVVLFTQKVYAKFDKVTRHGGLIGKR 180
QR++EHWR+KD NGE QYPRSSFVVNCTGDVCRGD VLFTQKVYAKFDKVTRHGGLIGKR
Sbjct: 150 QRVKEHWRLKDGNGEVQYPRSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRHGGLIGKR 209
Query: 181 TVAGRVVKESYGATKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRQLWNDEA 240
TVAGRVVKESYGA+KQQHTFTVEVLW RGVRKLPPLYPLLVKGRNLYKLRTFR+LWNDEA
Sbjct: 210 TVAGRVVKESYGASKQQHTFTVEVLWIRGVRKLPPLYPLLVKGRNLYKLRTFRRLWNDEA 269
Query: 241 ERLQVLAEKHKRGAAARSLRAMRTRKINFLQTEGGVKNQRHFHPARQTLNSKESSKRMQS 296
ER+QVLAEKH+RGAAAR LRAM+ +K +QT+G KNQ H H ARQ L SKE +RM S
Sbjct: 270 ERVQVLAEKHRRGAAARDLRAMQKKKRKIIQTKGCAKNQGHVHLARQPLKSKEKRQRMPS 329
BLAST of Moc02g13980 vs. TAIR 10
Match:
AT5G66840.1 (SAP domain-containing protein )
HSP 1 Score: 246.1 bits (627), Expect = 3.5e-65
Identity = 142/300 (47.33%), Postives = 195/300 (65.00%), Query Frame = 0
Query: 11 ICISSSSDDDDDEDEVSCGDDEEESDE---------QYDEEDDDEGESEEEYDN---EGS 70
+C S ++D DE + + EEE DE + +DDD ES+ E D +G
Sbjct: 11 LCSSEEEEEDVFGDENNYDETEEEEDEDTNSSEDDSDWSHDDDDATESDVEADEIGVKGD 70
Query: 71 DDDCDDVLSERVIRFLKENKNLDSLTLKDCKAYLRENGLRIAGTKSVCIQRIREHWRMKD 130
+DD D+ ++V R L +L S+ +K+CKAYLR++GLR++GTK VCI RI EHWR+KD
Sbjct: 71 NDDGDE--DDKVTRLLTAGSDLKSVNVKECKAYLRKHGLRLSGTKPVCIDRILEHWRIKD 130
Query: 131 ENGEAQYPRSSFVVNCTGDVCRGDVVLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKESY 190
GEA YP+SSF +NC GDVC+GD+VLFTQKV+ K++K+ + G ++G+RTVAG+VVKESY
Sbjct: 131 GTGEAVYPKSSFAINCKGDVCKGDIVLFTQKVHHKYEKMKKSGNIMGRRTVAGQVVKESY 190
Query: 191 GATKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRQLWNDEAERLQVLAEKHK 250
G KQQHTFT+EVLW G +KLPPLYPLLVKGRNLY+L T RQ W +E +R++VL EKH
Sbjct: 191 GTAKQQHTFTIEVLWCEGTQKLPPLYPLLVKGRNLYRLMTLRQRWPNEEDRVKVLNEKHN 250
Query: 251 RGAAARSLRAMRTRKINFLQTEGGVKNQRHF-HPARQTLNSKESSKRMQSKGKNKVLRRH 298
RGAAAR + R K ++ +G ++ H P + E + + + + H
Sbjct: 251 RGAAARKVMRERKIKSGYVLKDGRLQKPGHVKKPCQVKTRKNEKDENLTQRLRQNTPANH 308
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022158231.1 | 3.5e-160 | 100.00 | zinc finger CCCH domain-containing protein 62 [Momordica charantia] | [more] |
XP_038902878.1 | 4.4e-118 | 75.87 | zinc finger CCCH domain-containing protein 62-like [Benincasa hispida] | [more] |
XP_023512636.1 | 4.1e-116 | 76.85 | zinc finger CCCH domain-containing protein 62 [Cucurbita pepo subsp. pepo] | [more] |
KGN62051.1 | 3.5e-115 | 74.92 | hypothetical protein Csa_006128 [Cucumis sativus] | [more] |
XP_022971662.1 | 4.5e-115 | 76.17 | zinc finger CCCH domain-containing protein 62 isoform X1 [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
Q338N2 | 1.7e-40 | 39.02 | Zinc finger CCCH domain-containing protein 62 OS=Oryza sativa subsp. japonica OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1E0C9 | 1.7e-160 | 100.00 | zinc finger CCCH domain-containing protein 62 OS=Momordica charantia OX=3673 GN=... | [more] |
A0A0A0LQ19 | 1.7e-115 | 74.92 | SAP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G292810 PE=4 SV... | [more] |
A0A6J1I2K8 | 2.2e-115 | 76.17 | zinc finger CCCH domain-containing protein 62 isoform X1 OS=Cucurbita maxima OX=... | [more] |
A0A1S4E1S9 | 2.7e-113 | 75.24 | zinc finger CCCH domain-containing protein 62-like isoform X1 OS=Cucumis melo OX... | [more] |
A0A1S4E1T3 | 3.5e-113 | 75.32 | zinc finger CCCH domain-containing protein 62-like isoform X3 OS=Cucumis melo OX... | [more] |
Match Name | E-value | Identity | Description | |
AT5G66840.1 | 3.5e-65 | 47.33 | SAP domain-containing protein | [more] |