Moc02g13080 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc02g13080
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	CLK4-associating serine/arginine rich protein
Location	chr2: 9542688 .. 9543878 (+)
RNA-Seq Expression	Moc02g13080
Synteny	Moc02g13080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGCACGAGGCGAGGAGATCCGAGAGGAAGGTCCACGACATGATGGACGCTGCTCGAAAGCGAGCTCAAAGGCGCGCCGTCTTCCTCGCCAAGCGCCGTGGCGATCCTCAGCAATCCATCCAGGTCGTCGGAACTCGCTGCCGCGTTTACCGTGACGATGGTCTCTATCAAGCAACTCAGGACCAACAAGGCCTGTAAGAACTCTTCTTCGGCTTCTCATTTGATTATTAGCGGCATTAGATACTAAATGCTTGGATATCCTATTCTCGGCTGATTTCTGTCTTAAGGATACAATTCTGGATGATTTGAATTGCTGCAATTCGTTTATTTTTTCCAAAGTTATTGAGGACCATTTGGGAATTGGCTGCTAGAGTTGAACTGCATCACTATCCTGAAACCTTTTTCTTCTTCACTTCGTTCATTGCGTGTTTAAAATTTAAAACGAGAAATGAGGTATTTATTTGCGGATCAATAGGAACTGAGGATTTTATTGCAGGAGGTTCTAGTTTTATGTTTTAACCCTCCTCGTAACACCCTTAACTGAATTGGTACACGTAAGAATTTTGTTATATCCGAGCATTTGTTGGCTGGGGTTTATCTTCTTATTTTTTGGTTAATTGTCAGATTGTGTTTTATTATTTTGGTGGCATTACTGTTTTTGAGCTCCAAACTCTAACTTTACCTTATGTCTTAATTTTTTCTTTTTGTGTAACCTCTGTCTCAGGATTCCTTGGAATGGTAAGCAGGATGTAATGATTGACAGGTTCGTTCCTGTAAATCGTTGGAGGACTGTTTGATTTTTAAGTTCTCGTTTGGCTAATTATTTATGATTTAATGCTGAGGGGTAGGTGTTAATTTTTTGAGCAGATTTGATGGACGTGCCCTGCTTGATTTCATTCGAGAACCCCGACATATTCGAACACAAGAAAAATCGGAGGAAGAAGAGGAATTAGAAGAGTTTGTTAATTTTCAGCGTTATCGAGATTTAATTAAGCATCGACGTCGAGGATGTGGGTACTTCTTTTTACTTTTATCGAACTCTTAAATCCTCTAACAATTCAATGCATAAACCCACTAGCTTTCCTTATTCGATGAGCAATAAGGACAAAGGTTATTTTTCTTTGTATATTTTATAATGATGATGTAAATATTTAACTAAGCTTTCTACATTTCCATGTCAACAGTTAA

mRNA sequence

ATGTGGCACGAGGCGAGGAGATCCGAGAGGAAGGTCCACGACATGATGGACGCTGCTCGAAAGCGAGCTCAAAGGCGCGCCGTCTTCCTCGCCAAGCGCCGTGGCGATCCTCAGCAATCCATCCAGGTCGTCGGAACTCGCTGCCGCGTTTACCGTGACGATGGTCTCTATCAAGCAACTCAGGACCAACAAGGCCTGATTCCTTGGAATGGTAAGCAGGATGTAATGATTGACAGATTTGATGGACGTGCCCTGCTTGATTTCATTCGAGAACCCCGACATATTCGAACACAAGAAAAATCGGAGGAAGAAGAGGAATTAGAAGAGTTTGTTAATTTTCAGCGTTATCGAGATTTAATTAAGCATCGACGTCGAGGATGTGGTTAA

Coding sequence (CDS)

ATGTGGCACGAGGCGAGGAGATCCGAGAGGAAGGTCCACGACATGATGGACGCTGCTCGAAAGCGAGCTCAAAGGCGCGCCGTCTTCCTCGCCAAGCGCCGTGGCGATCCTCAGCAATCCATCCAGGTCGTCGGAACTCGCTGCCGCGTTTACCGTGACGATGGTCTCTATCAAGCAACTCAGGACCAACAAGGCCTGATTCCTTGGAATGGTAAGCAGGATGTAATGATTGACAGATTTGATGGACGTGCCCTGCTTGATTTCATTCGAGAACCCCGACATATTCGAACACAAGAAAAATCGGAGGAAGAAGAGGAATTAGAAGAGTTTGTTAATTTTCAGCGTTATCGAGATTTAATTAAGCATCGACGTCGAGGATGTGGTTAA

Protein sequence

MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQATQDQQGLIPWNGKQDVMIDRFDGRALLDFIREPRHIRTQEKSEEEEELEEFVNFQRYRDLIKHRRRGCG

Homology

[Close]

BLAST of Moc02g13080 vs. NCBI nr
Match: XP_022149495.1 (CLK4-associating serine/arginine rich protein [Momordica charantia])

HSP 1 Score: 253.4 bits (646), Expect = 1.0e-63
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60
           MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT
Sbjct: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60

Query: 61  QDQQGLIPWNGKQDVMIDRFDGRALLDFIREPRHIRTQEKSEEEEELEEFVNFQRYRDLI 120
           QDQQGLIPWNGKQDVMIDRFDGRALLDFIREPRHIRTQEKSEEEEELEEFVNFQRYRDLI
Sbjct: 61  QDQQGLIPWNGKQDVMIDRFDGRALLDFIREPRHIRTQEKSEEEEELEEFVNFQRYRDLI 120

Query: 121 KHRRRG 127
           KHRRRG
Sbjct: 121 KHRRRG 126

[Close]

BLAST of Moc02g13080 vs. NCBI nr
Match: XP_022947250.1 (CLK4-associating serine/arginine rich protein isoform X1 [Cucurbita moschata])

HSP 1 Score: 248.4 bits (633), Expect = 3.2e-62
Identity = 126/128 (98.44%), Postives = 126/128 (98.44%), Query Frame = 0


Query: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60
           MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT
Sbjct: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60

Query: 61  QDQQGLIPWNGKQDVMIDRFDGRALLDFIREP--RHIRTQEKSEEEEELEEFVNFQRYRD 120
           QDQQGLIPWNGKQDVMIDRFDGRALLDFIREP  RHIRTQEKSEEEEELEEFVNFQRYRD
Sbjct: 61  QDQQGLIPWNGKQDVMIDRFDGRALLDFIREPGSRHIRTQEKSEEEEELEEFVNFQRYRD 120

Query: 121 LIKHRRRG 127
           LIKHRRRG
Sbjct: 121 LIKHRRRG 128

[Close]

BLAST of Moc02g13080 vs. NCBI nr
Match: XP_023006935.1 (CLK4-associating serine/arginine rich protein isoform X1 [Cucurbita maxima])

HSP 1 Score: 248.4 bits (633), Expect = 3.2e-62
Identity = 126/128 (98.44%), Postives = 126/128 (98.44%), Query Frame = 0


Query: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60
           MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT
Sbjct: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60

Query: 61  QDQQGLIPWNGKQDVMIDRFDGRALLDFIREP--RHIRTQEKSEEEEELEEFVNFQRYRD 120
           QDQQGLIPWNGKQDVMIDRFDGRALLDFIREP  RHIRTQEKSEEEEELEEFVNFQRYRD
Sbjct: 61  QDQQGLIPWNGKQDVMIDRFDGRALLDFIREPGSRHIRTQEKSEEEEELEEFVNFQRYRD 120

Query: 121 LIKHRRRG 127
           LIKHRRRG
Sbjct: 121 LIKHRRRG 128

[Close]

BLAST of Moc02g13080 vs. NCBI nr
Match: KAG7035202.1 (CLK4-associating serine/arginine rich protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 248.4 bits (633), Expect = 3.2e-62
Identity = 126/128 (98.44%), Postives = 126/128 (98.44%), Query Frame = 0


Query: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60
           MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT
Sbjct: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60

Query: 61  QDQQGLIPWNGKQDVMIDRFDGRALLDFIREP--RHIRTQEKSEEEEELEEFVNFQRYRD 120
           QDQQGLIPWNGKQDVMIDRFDGRALLDFIREP  RHIRTQEKSEEEEELEEFVNFQRYRD
Sbjct: 61  QDQQGLIPWNGKQDVMIDRFDGRALLDFIREPGSRHIRTQEKSEEEEELEEFVNFQRYRD 120

Query: 121 LIKHRRRG 127
           LIKHRRRG
Sbjct: 121 LIKHRRRG 128

[Close]

BLAST of Moc02g13080 vs. NCBI nr
Match: XP_023521265.1 (CLK4-associating serine/arginine rich protein-like [Cucurbita pepo subsp. pepo] >XP_023533452.1 CLK4-associating serine/arginine rich protein-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 248.4 bits (633), Expect = 3.2e-62
Identity = 126/128 (98.44%), Postives = 126/128 (98.44%), Query Frame = 0


Query: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60
           MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT
Sbjct: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60

Query: 61  QDQQGLIPWNGKQDVMIDRFDGRALLDFIREP--RHIRTQEKSEEEEELEEFVNFQRYRD 120
           QDQQGLIPWNGKQDVMIDRFDGRALLDFIREP  RHIRTQEKSEEEEELEEFVNFQRYRD
Sbjct: 61  QDQQGLIPWNGKQDVMIDRFDGRALLDFIREPGSRHIRTQEKSEEEEELEEFVNFQRYRD 120

Query: 121 LIKHRRRG 127
           LIKHRRRG
Sbjct: 121 LIKHRRRG 128

[Close]

BLAST of Moc02g13080 vs. ExPASy Swiss-Prot
Match: A0JNI5 (CLK4-associating serine/arginine rich protein OS=Bos taurus OX=9913 GN=CLASRP PE=2 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 4.3e-17
Identity = 50/122 (40.98%), Postives = 71/122 (58.20%), Query Frame = 0


Query: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60
           MWHEAR+ ERK+  MM   +KRA+RR  +  K + DP Q +QV G  C+V+ D  +  A 
Sbjct: 1   MWHEARKHERKLRGMMVDYKKRAERRREYYEKIKKDPAQFLQVHGRACKVHLDSAVALAA 60

Query: 61  QDQQGLIPWNGKQDVMIDRFDGRALLDFIREPRHIRTQEKSEEEEELEEFVNFQRYRDLI 120
           +    ++PW G  + MIDRFD RA LD I +         S E+E  E   N++RYR L+
Sbjct: 61  ESPVNMMPWQGDTNNMIDRFDVRAHLDHIPDYTPPLLTTISPEQESDERKCNYERYRGLV 120

Query: 121 KH 123
           ++
Sbjct: 121 QN 122

[Close]

BLAST of Moc02g13080 vs. ExPASy Swiss-Prot
Match: Q8N2M8 (CLK4-associating serine/arginine rich protein OS=Homo sapiens OX=9606 GN=CLASRP PE=1 SV=4)

HSP 1 Score: 89.0 bits (219), Expect = 4.3e-17
Identity = 50/122 (40.98%), Postives = 71/122 (58.20%), Query Frame = 0


Query: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60
           MWHEAR+ ERK+  MM   +KRA+RR  +  K + DP Q +QV G  C+V+ D  +  A 
Sbjct: 1   MWHEARKHERKLRGMMVDYKKRAERRREYYEKIKKDPAQFLQVHGRACKVHLDSAVALAA 60

Query: 61  QDQQGLIPWNGKQDVMIDRFDGRALLDFIREPRHIRTQEKSEEEEELEEFVNFQRYRDLI 120
           +    ++PW G  + MIDRFD RA LD I +         S E+E  E   N++RYR L+
Sbjct: 61  ESPVNMMPWQGDTNNMIDRFDVRAHLDHIPDYTPPLLTTISPEQESDERKCNYERYRGLV 120

Query: 121 KH 123
           ++
Sbjct: 121 QN 122

[Close]

BLAST of Moc02g13080 vs. ExPASy Swiss-Prot
Match: Q8CFC7 (CLK4-associating serine/arginine rich protein OS=Mus musculus OX=10090 GN=Clasrp PE=1 SV=3)

HSP 1 Score: 89.0 bits (219), Expect = 4.3e-17
Identity = 50/122 (40.98%), Postives = 71/122 (58.20%), Query Frame = 0


Query: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60
           MWHEAR+ ERK+  MM   +KRA+RR  +  K + DP Q +QV G  C+V+ D  +  A 
Sbjct: 1   MWHEARKHERKLRGMMVDYKKRAERRREYYEKIKKDPAQFLQVHGRACKVHLDSAVALAA 60

Query: 61  QDQQGLIPWNGKQDVMIDRFDGRALLDFIREPRHIRTQEKSEEEEELEEFVNFQRYRDLI 120
           +    ++PW G  + MIDRFD RA LD I +         S E+E  E   N++RYR L+
Sbjct: 61  ESPVNMMPWQGDTNNMIDRFDVRAHLDHIPDYTPPLLTTISPEQESDERKCNYERYRGLV 120

Query: 121 KH 123
           ++
Sbjct: 121 QN 122

[Close]

BLAST of Moc02g13080 vs. ExPASy Swiss-Prot
Match: Q5HZB6 (CLK4-associating serine/arginine rich protein OS=Rattus norvegicus OX=10116 GN=Clasrp PE=1 SV=2)

HSP 1 Score: 89.0 bits (219), Expect = 4.3e-17
Identity = 50/122 (40.98%), Postives = 71/122 (58.20%), Query Frame = 0


Query: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60
           MWHEAR+ ERK+  MM   +KRA+RR  +  K + DP Q +QV G  C+V+ D  +  A 
Sbjct: 1   MWHEARKHERKLRGMMVDYKKRAERRREYYEKIKKDPAQFLQVHGRACKVHLDSAVALAA 60

Query: 61  QDQQGLIPWNGKQDVMIDRFDGRALLDFIREPRHIRTQEKSEEEEELEEFVNFQRYRDLI 120
           +    ++PW G  + MIDRFD RA LD I +         S E+E  E   N++RYR L+
Sbjct: 61  ESPVNMMPWQGDTNNMIDRFDVRAHLDHIPDYTPPLLTTISPEQESDERKCNYERYRGLV 120

Query: 121 KH 123
           ++
Sbjct: 121 QN 122

[Close]

BLAST of Moc02g13080 vs. ExPASy Swiss-Prot
Match: Q12872 (Splicing factor, suppressor of white-apricot homolog OS=Homo sapiens OX=9606 GN=SFSWAP PE=1 SV=3)

HSP 1 Score: 50.8 bits (120), Expect = 1.3e-05
Identity = 33/100 (33.00%), Postives = 49/100 (49.00%), Query Frame = 0


Query: 35  GDPQQSIQVVGTRCRVYRDDGLYQATQDQQGLIPWNGKQDVMIDRFDGRALLDFIRE--- 94
           G  +  + V G  C+++RDD    A +  Q LIPW G   ++IDR+DGR  L  + E   
Sbjct: 29  GGSRVELLVFGYACKLFRDDERALAQEQGQHLIPWMGDHKILIDRYDGRGHLHDLSEYDA 88

Query: 95  --PRHIRTQEKSEEEEELEEFVNFQRY----RDLIKHRRR 126
                 R  + SEEE  +E   + +RY     DL++   R
Sbjct: 89  EYSTWNRDYQLSEEEARIEALCDEERYLALHTDLLEEEAR 128

[Close]

BLAST of Moc02g13080 vs. ExPASy TrEMBL
Match: A0A6J1D5W2 (CLK4-associating serine/arginine rich protein OS=Momordica charantia OX=3673 GN=LOC111017913 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 4.9e-64
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60
           MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT
Sbjct: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60

Query: 61  QDQQGLIPWNGKQDVMIDRFDGRALLDFIREPRHIRTQEKSEEEEELEEFVNFQRYRDLI 120
           QDQQGLIPWNGKQDVMIDRFDGRALLDFIREPRHIRTQEKSEEEEELEEFVNFQRYRDLI
Sbjct: 61  QDQQGLIPWNGKQDVMIDRFDGRALLDFIREPRHIRTQEKSEEEEELEEFVNFQRYRDLI 120

Query: 121 KHRRRG 127
           KHRRRG
Sbjct: 121 KHRRRG 126

[Close]

BLAST of Moc02g13080 vs. ExPASy TrEMBL
Match: A0A6J1L1K6 (CLK4-associating serine/arginine rich protein isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499577 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.6e-62
Identity = 126/128 (98.44%), Postives = 126/128 (98.44%), Query Frame = 0


Query: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60
           MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT
Sbjct: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60

Query: 61  QDQQGLIPWNGKQDVMIDRFDGRALLDFIREP--RHIRTQEKSEEEEELEEFVNFQRYRD 120
           QDQQGLIPWNGKQDVMIDRFDGRALLDFIREP  RHIRTQEKSEEEEELEEFVNFQRYRD
Sbjct: 61  QDQQGLIPWNGKQDVMIDRFDGRALLDFIREPGSRHIRTQEKSEEEEELEEFVNFQRYRD 120

Query: 121 LIKHRRRG 127
           LIKHRRRG
Sbjct: 121 LIKHRRRG 128

[Close]

BLAST of Moc02g13080 vs. ExPASy TrEMBL
Match: A0A6J1KZ57 (CLK4-associating serine/arginine rich protein isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111499577 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.6e-62
Identity = 126/128 (98.44%), Postives = 126/128 (98.44%), Query Frame = 0


Query: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60
           MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT
Sbjct: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60

Query: 61  QDQQGLIPWNGKQDVMIDRFDGRALLDFIREP--RHIRTQEKSEEEEELEEFVNFQRYRD 120
           QDQQGLIPWNGKQDVMIDRFDGRALLDFIREP  RHIRTQEKSEEEEELEEFVNFQRYRD
Sbjct: 61  QDQQGLIPWNGKQDVMIDRFDGRALLDFIREPGSRHIRTQEKSEEEEELEEFVNFQRYRD 120

Query: 121 LIKHRRRG 127
           LIKHRRRG
Sbjct: 121 LIKHRRRG 128

[Close]

BLAST of Moc02g13080 vs. ExPASy TrEMBL
Match: A0A6J1G6C5 (CLK4-associating serine/arginine rich protein isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451173 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.6e-62
Identity = 126/128 (98.44%), Postives = 126/128 (98.44%), Query Frame = 0


Query: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60
           MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT
Sbjct: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60

Query: 61  QDQQGLIPWNGKQDVMIDRFDGRALLDFIREP--RHIRTQEKSEEEEELEEFVNFQRYRD 120
           QDQQGLIPWNGKQDVMIDRFDGRALLDFIREP  RHIRTQEKSEEEEELEEFVNFQRYRD
Sbjct: 61  QDQQGLIPWNGKQDVMIDRFDGRALLDFIREPGSRHIRTQEKSEEEEELEEFVNFQRYRD 120

Query: 121 LIKHRRRG 127
           LIKHRRRG
Sbjct: 121 LIKHRRRG 128

[Close]

BLAST of Moc02g13080 vs. ExPASy TrEMBL
Match: A0A6J1G5W5 (CLK4-associating serine/arginine rich protein isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111451173 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.6e-62
Identity = 126/128 (98.44%), Postives = 126/128 (98.44%), Query Frame = 0


Query: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60
           MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT
Sbjct: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60

Query: 61  QDQQGLIPWNGKQDVMIDRFDGRALLDFIREP--RHIRTQEKSEEEEELEEFVNFQRYRD 120
           QDQQGLIPWNGKQDVMIDRFDGRALLDFIREP  RHIRTQEKSEEEEELEEFVNFQRYRD
Sbjct: 61  QDQQGLIPWNGKQDVMIDRFDGRALLDFIREPGSRHIRTQEKSEEEEELEEFVNFQRYRD 120

Query: 121 LIKHRRRG 127
           LIKHRRRG
Sbjct: 121 LIKHRRRG 128

[Close]

BLAST of Moc02g13080 vs. TAIR 10
Match: AT4G36980.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Splicing factor, suppressor of white apricot (InterPro:IPR019147); Has 7672 Blast hits to 5479 proteins in 321 species: Archae - 0; Bacteria - 89; Metazoa - 5155; Fungi - 712; Plants - 341; Viruses - 39; Other Eukaryotes - 1336 (source: NCBI BLink). )

HSP 1 Score: 217.2 bits (552), Expect = 7.5e-57
Identity = 108/128 (84.38%), Postives = 119/128 (92.97%), Query Frame = 0


Query: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60
           MWHEARRSE+KVHDMMDAARKRAQRRA++LAKRRGDP QSIQ VG+R RV+RDDGLYQAT
Sbjct: 1   MWHEARRSEKKVHDMMDAARKRAQRRAIYLAKRRGDPIQSIQAVGSRYRVFRDDGLYQAT 60

Query: 61  QDQQGLIPWNGKQDVMIDRFDGRALLDFIRE--PRHIRTQEKSEEEEELEEFVNFQRYRD 120
           +DQQGLIPWNGKQDVMIDRFDGRALLDF+RE   R +R  +K+EEEEELEEFVNF+RYRD
Sbjct: 61  EDQQGLIPWNGKQDVMIDRFDGRALLDFVREAGSRSVRPHKKTEEEEELEEFVNFERYRD 120

Query: 121 LIKHRRRG 127
           LIKHRRRG
Sbjct: 121 LIKHRRRG 128

[Close]

BLAST of Moc02g13080 vs. TAIR 10
Match: AT4G36980.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Splicing factor, suppressor of white apricot (InterPro:IPR019147); Has 5391 Blast hits to 4388 proteins in 280 species: Archae - 1; Bacteria - 114; Metazoa - 3014; Fungi - 666; Plants - 308; Viruses - 14; Other Eukaryotes - 1274 (source: NCBI BLink). )

HSP 1 Score: 217.2 bits (552), Expect = 7.5e-57
Identity = 108/128 (84.38%), Postives = 119/128 (92.97%), Query Frame = 0


Query: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60
           MWHEARRSE+KVHDMMDAARKRAQRRA++LAKRRGDP QSIQ VG+R RV+RDDGLYQAT
Sbjct: 1   MWHEARRSEKKVHDMMDAARKRAQRRAIYLAKRRGDPIQSIQAVGSRYRVFRDDGLYQAT 60

Query: 61  QDQQGLIPWNGKQDVMIDRFDGRALLDFIRE--PRHIRTQEKSEEEEELEEFVNFQRYRD 120
           +DQQGLIPWNGKQDVMIDRFDGRALLDF+RE   R +R  +K+EEEEELEEFVNF+RYRD
Sbjct: 61  EDQQGLIPWNGKQDVMIDRFDGRALLDFVREAGSRSVRPHKKTEEEEELEEFVNFERYRD 120

Query: 121 LIKHRRRG 127
           LIKHRRRG
Sbjct: 121 LIKHRRRG 128

[Close]

BLAST of Moc02g13080 vs. TAIR 10
Match: AT4G36980.4 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Splicing factor, suppressor of white apricot (InterPro:IPR019147). )

HSP 1 Score: 217.2 bits (552), Expect = 7.5e-57
Identity = 108/128 (84.38%), Postives = 119/128 (92.97%), Query Frame = 0


Query: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60
           MWHEARRSE+KVHDMMDAARKRAQRRA++LAKRRGDP QSIQ VG+R RV+RDDGLYQAT
Sbjct: 1   MWHEARRSEKKVHDMMDAARKRAQRRAIYLAKRRGDPIQSIQAVGSRYRVFRDDGLYQAT 60

Query: 61  QDQQGLIPWNGKQDVMIDRFDGRALLDFIRE--PRHIRTQEKSEEEEELEEFVNFQRYRD 120
           +DQQGLIPWNGKQDVMIDRFDGRALLDF+RE   R +R  +K+EEEEELEEFVNF+RYRD
Sbjct: 61  EDQQGLIPWNGKQDVMIDRFDGRALLDFVREAGSRSVRPHKKTEEEEELEEFVNFERYRD 120

Query: 121 LIKHRRRG 127
           LIKHRRRG
Sbjct: 121 LIKHRRRG 128

[Close]

BLAST of Moc02g13080 vs. TAIR 10
Match: AT4G36980.3 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Splicing factor, suppressor of white apricot (InterPro:IPR019147). )

HSP 1 Score: 217.2 bits (552), Expect = 7.5e-57
Identity = 108/128 (84.38%), Postives = 119/128 (92.97%), Query Frame = 0


Query: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60
           MWHEARRSE+KVHDMMDAARKRAQRRA++LAKRRGDP QSIQ VG+R RV+RDDGLYQAT
Sbjct: 1   MWHEARRSEKKVHDMMDAARKRAQRRAIYLAKRRGDPIQSIQAVGSRYRVFRDDGLYQAT 60

Query: 61  QDQQGLIPWNGKQDVMIDRFDGRALLDFIRE--PRHIRTQEKSEEEEELEEFVNFQRYRD 120
           +DQQGLIPWNGKQDVMIDRFDGRALLDF+RE   R +R  +K+EEEEELEEFVNF+RYRD
Sbjct: 61  EDQQGLIPWNGKQDVMIDRFDGRALLDFVREAGSRSVRPHKKTEEEEELEEFVNFERYRD 120

Query: 121 LIKHRRRG 127
           LIKHRRRG
Sbjct: 121 LIKHRRRG 128

The following BLAST results are available for this feature:

BLAST of Moc02g13080 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022149495.1	1.0e-63	100.00	CLK4-associating serine/arginine rich protein [Momordica charantia]	[more]
XP_022947250.1	3.2e-62	98.44	CLK4-associating serine/arginine rich protein isoform X1 [Cucurbita moschata]	[more]
XP_023006935.1	3.2e-62	98.44	CLK4-associating serine/arginine rich protein isoform X1 [Cucurbita maxima]	[more]
KAG7035202.1	3.2e-62	98.44	CLK4-associating serine/arginine rich protein [Cucurbita argyrosperma subsp. arg...	[more]
XP_023521265.1	3.2e-62	98.44	CLK4-associating serine/arginine rich protein-like [Cucurbita pepo subsp. pepo] ...	[more]

BLAST of Moc02g13080 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A0JNI5	4.3e-17	40.98	CLK4-associating serine/arginine rich protein OS=Bos taurus OX=9913 GN=CLASRP PE...	[more]
Q8N2M8	4.3e-17	40.98	CLK4-associating serine/arginine rich protein OS=Homo sapiens OX=9606 GN=CLASRP ...	[more]
Q8CFC7	4.3e-17	40.98	CLK4-associating serine/arginine rich protein OS=Mus musculus OX=10090 GN=Clasrp...	[more]
Q5HZB6	4.3e-17	40.98	CLK4-associating serine/arginine rich protein OS=Rattus norvegicus OX=10116 GN=C...	[more]
Q12872	1.3e-05	33.00	Splicing factor, suppressor of white-apricot homolog OS=Homo sapiens OX=9606 GN=...	[more]

BLAST of Moc02g13080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D5W2	4.9e-64	100.00	CLK4-associating serine/arginine rich protein OS=Momordica charantia OX=3673 GN=...	[more]
A0A6J1L1K6	1.6e-62	98.44	CLK4-associating serine/arginine rich protein isoform X1 OS=Cucurbita maxima OX=...	[more]
A0A6J1KZ57	1.6e-62	98.44	CLK4-associating serine/arginine rich protein isoform X2 OS=Cucurbita maxima OX=...	[more]
A0A6J1G6C5	1.6e-62	98.44	CLK4-associating serine/arginine rich protein isoform X1 OS=Cucurbita moschata O...	[more]
A0A6J1G5W5	1.6e-62	98.44	CLK4-associating serine/arginine rich protein isoform X2 OS=Cucurbita moschata O...	[more]

BLAST of Moc02g13080 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G36980.1	7.5e-57	84.38	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT4G36980.2	7.5e-57	84.38	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT4G36980.4	7.5e-57	84.38	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT4G36980.3	7.5e-57	84.38	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019147	Suppressor of white apricot, N-terminal domain	SMART	SM01141	DRY_EERY_2	coord: 39..128 e-value: 1.9E-28 score: 110.5
IPR019147	Suppressor of white apricot, N-terminal domain	PFAM	PF09750	DRY_EERY	coord: 41..126 e-value: 4.7E-30 score: 104.7
IPR040397	Suppressor of white apricot	PANTHER	PTHR13161	SPLICING FACTOR SUPPRESSOR OF WHITE APRICOT	coord: 1..127
None	No IPR available	PANTHER	PTHR13161:SF4	CLK4-ASSOCIATING SERINE/ARGININE RICH PROTEIN	coord: 1..127

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc02g13080.1	Moc02g13080.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane