Moc02g13020 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc02g13020
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	protein SHORT-ROOT
Location	chr2: 9499980 .. 9502953 (+)
RNA-Seq Expression	Moc02g13020
Synteny	Moc02g13020

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGCCTTATTCTTCAGGCAGCAGCAGCTGGTTTCTGATGTTCAATCTTACAGCAACTCCACCCGAAACGATGTCGTCGTCAACTCGTCGAGTAGCTTCGAAAATTCTGCTACTGATCGTGATCGTAATCAAAATCCTTACTTCCTTGACCAGCCAACACAAGAATGCTTCTCCAGCTTGTCGGTCACGGAGGATGAAGATCATGACCATTTCTCTGCAGCCTCTTCTTCCAACCACTACCGCCATCCTCCACATCCCCATACCGCTACCGTCAGTACTACTTCTATCGGTACGGTTGAACTATCACTTAACTCAAAAAAATTTTTTAATCGTAAGTTGAATTTGATGGGAAATGTTTTAGTTTGAGCGGATGGATAATGATAGAATTTTTTTTTTATAAAACATCGAAATTAAGATCTTCAATTGATGGGTTATGATAATTTATTTTGGAAAATACTTAATATGAGGATCAAATCTTGTCCTTCACCATCATTAAATATTTGACAACTATTTTTACATTTCTCTCTCAGTTATTAGCAGTGATGAAATATTGGTTTATAAAAAATGAGCAAAATTTTTTTCAATTTTTTTTTAAAATAACGGGTGTAAAAAATCTTGAATTGATGGGTCATGGTATAAAGATTTCATTTTTAGAGACTATTGGACCCAAAAGCTTAATTAAACTAGTGAGTTAAAAGTTTACACAAATATAATTTTTAACCTTAGGCTTGAATAAGGTTAAAAAAAAATAAAAAATAATAATAATAACTTTTGCTTGAATGAGTAGTGTAATTAATTCTTTTTAAGAGTTCATATCAATATACGAGACTACTTTTACAGGACATTTTATGGTTAATTTTGAGCTTTTTTTTTTGTTTTTATTTGATTCATTTTGTGGCTAGATATACGAGTATTTTGGTGATTAAATTTGGGCAATTTGGGGTAAAAATGAATTTTCCCTTTTTTTTCTCTTTTAATCCTTAACGGTTATCTCTGCGTGTGGTTAAGGAAATGACCTAATAAAAGATTGTTAATACTAATTAGGGTAGAAATGACAATATTGGAGTTTGAAGACCTCATGTTCTATATCACATTAAACTAACATCAAATCCAAAAAGTTTAATATAGTTCTTATGGATTATAAATATATTAACAGGTACGGCTACTCCAACAGATCAAAGATTCTCCCATTTCATCAAAGACTTGAACTTCAAATTCTCCGACAATTGGGCCTCTGAGTTACTCCTCCAAACAGCCATCGCTATTACCGACAATAACACTTCTCGCATCCAACAATTCATGTGGATGCTCAATGAACTTGGCTCCCCGTACGGCGACACTAACCAAAAGCTGGCTTTCTACTTCCTTCAAGCCATGTTTAGTCGCGTCATTGACTCCGGTGACCGATGCTATCGAAGCTTGGTGGCAGTGTCGGAGAAACGATCTTGTTTCGAGTTAACGAGAAGGATAGAGCTGAAGTTTCAAGAGATGAGTCCATGGATGACTTTTGGTCATGTAGCTTCCAATGGTGCCATAATGGAGGCTTTTGAAGGAGAACGAAAGTTGCACATAATTGATATTAGCAACTCCTTTTGTACCCAATGGCCGACCTTACTCGAAGCTCTTGCGACACGATCAAACGCCGAAATTCCTCACTTGAAGCTAACAATGCTAATTACCGCCAAATCTAATACCACCCTCGAATCTCAGAAGGTGAGAAATTTTACTAGGTCACATAAATTTAGTAATAAAAATCTCTTATCGCAATTCTACTATGTTTTTTACCGGCAAGAGATCAAGGAAATAAAAAAAAGGATAGAAGAGAGATTTTTTTTTAGTGTTACAAATATGTCTATGTTTAATAAGTTTCAATTTAATTTCATATAGTTCATATATTTTAATATTTTAAAATTATATATTATTGTTAATATTTCAACAGTGCTCAGAAAACAATTTAGAGAAAGAAATATCTTATCTAAACGGAAACTTTTAATTCCTCCTCCTAACTTCTAAGAATGGGTAGAAATTTAAGGTTTTTTTTTCCAACATCTACTAACAAAAATGAAAATTTTAAAAATATAACTAACTAATTAAATTGAAAATTTCAAACAATAATAGAAACTCCAATGAGGAAAAAAAACACATGTTTCGTTATATAAAAAAAAAAAAAAAAAAAAAAAACATGTTTCAACTAGATTTTAACATGTCTAATTTTTTCAGAATGTCATAAATTTCACCGATGAATTTCAATTGTGAATTATTTCAGAAGATAATGAAGGAGATAAGTAAAAGAATGGAGAAATTCGGCAGACTTATGGGCGTTCCGTTCAAATTCAAGCCCATATTCCACTCCGGCGACGTTTCCGATATCAATTTCGCCCAATTAGGCGTCAAGACTGGCGAAGCAGTCGCCGTCAACTGCGTCGGCGCGTTGCGCTCCGTCGCGCCGGTTGGTAACCGGCGAGATTTTCTGATATCGCTGTTCCGAGGTTTGCGGCCGAGGATAATCACGGTGGTGGAGGAGGAGGCGGATCTCGCCGGCGGCGGCGTTGACTTAGTCAAAGACGTTCAAGAGTGCTTACGGTGGTTTTCGGTTTACTTCGATTCGTTGGCCGGAAGCTTCCCGACTGCCAGCAATGAGCAGTTGGCGATTGAACGCGCCGCCGGACTTGCCGTCGTGGACTTGCTGGCGCGCGAGCCGGCGGAGTCGGTGGAGAGGCGCGAGACTGCGGCGCGTTGGGCGCGTCGTTTGCATGGGGGTGGTTTTAATGCAGTGTCATTTAGCGAAGATGTAAACGAGGACGTACGGGCGCTTTTGAGGAGGTATAAGGAGGGGTGGACGGTGACGGAGGACGGCGACGGCGCCGGAATATTCTTGGCCTGGAAGGAGCAGCCGGTGGTGTGGGCCGCCGCATGGGCTTCCGGACCGCCGGACGGAGAGAAGAGTCGCCGGAGCAGTTCAAGCGTGTGA

mRNA sequence

ATGGATGCCTTATTCTTCAGGCAGCAGCAGCTGGTTTCTGATGTTCAATCTTACAGCAACTCCACCCGAAACGATGTCGTCGTCAACTCGTCGAGTAGCTTCGAAAATTCTGCTACTGATCGTGATCGTAATCAAAATCCTTACTTCCTTGACCAGCCAACACAAGAATGCTTCTCCAGCTTGTCGGTCACGGAGGATGAAGATCATGACCATTTCTCTGCAGCCTCTTCTTCCAACCACTACCGCCATCCTCCACATCCCCATACCGCTACCGTCAGTACTACTTCTATCGGTACGGCTACTCCAACAGATCAAAGATTCTCCCATTTCATCAAAGACTTGAACTTCAAATTCTCCGACAATTGGGCCTCTGAGTTACTCCTCCAAACAGCCATCGCTATTACCGACAATAACACTTCTCGCATCCAACAATTCATGTGGATGCTCAATGAACTTGGCTCCCCGTACGGCGACACTAACCAAAAGCTGGCTTTCTACTTCCTTCAAGCCATGTTTAGTCGCGTCATTGACTCCGGTGACCGATGCTATCGAAGCTTGGTGGCAGTGTCGGAGAAACGATCTTGTTTCGAGTTAACGAGAAGGATAGAGCTGAAGTTTCAAGAGATGAGTCCATGGATGACTTTTGGTCATGTAGCTTCCAATGGTGCCATAATGGAGGCTTTTGAAGGAGAACGAAAGTTGCACATAATTGATATTAGCAACTCCTTTTGTACCCAATGGCCGACCTTACTCGAAGCTCTTGCGACACGATCAAACGCCGAAATTCCTCACTTGAAGCTAACAATGCTAATTACCGCCAAATCTAATACCACCCTCGAATCTCAGAAGAAGATAATGAAGGAGATAAGTAAAAGAATGGAGAAATTCGGCAGACTTATGGGCGTTCCGTTCAAATTCAAGCCCATATTCCACTCCGGCGACGTTTCCGATATCAATTTCGCCCAATTAGGCGTCAAGACTGGCGAAGCAGTCGCCGTCAACTGCGTCGGCGCGTTGCGCTCCGTCGCGCCGGTTGGTAACCGGCGAGATTTTCTGATATCGCTGTTCCGAGGTTTGCGGCCGAGGATAATCACGGTGGTGGAGGAGGAGGCGGATCTCGCCGGCGGCGGCGTTGACTTAGTCAAAGACGTTCAAGAGTGCTTACGGTGGTTTTCGGTTTACTTCGATTCGTTGGCCGGAAGCTTCCCGACTGCCAGCAATGAGCAGTTGGCGATTGAACGCGCCGCCGGACTTGCCGTCGTGGACTTGCTGGCGCGCGAGCCGGCGGAGTCGGTGGAGAGGCGCGAGACTGCGGCGCGTTGGGCGCGTCGTTTGCATGGGGGTGGTTTTAATGCAGTGTCATTTAGCGAAGATGTAAACGAGGACGTACGGGCGCTTTTGAGGAGGTATAAGGAGGGGTGGACGGTGACGGAGGACGGCGACGGCGCCGGAATATTCTTGGCCTGGAAGGAGCAGCCGGTGGTGTGGGCCGCCGCATGGGCTTCCGGACCGCCGGACGGAGAGAAGAGTCGCCGGAGCAGTTCAAGCGTGTGA

Coding sequence (CDS)

ATGGATGCCTTATTCTTCAGGCAGCAGCAGCTGGTTTCTGATGTTCAATCTTACAGCAACTCCACCCGAAACGATGTCGTCGTCAACTCGTCGAGTAGCTTCGAAAATTCTGCTACTGATCGTGATCGTAATCAAAATCCTTACTTCCTTGACCAGCCAACACAAGAATGCTTCTCCAGCTTGTCGGTCACGGAGGATGAAGATCATGACCATTTCTCTGCAGCCTCTTCTTCCAACCACTACCGCCATCCTCCACATCCCCATACCGCTACCGTCAGTACTACTTCTATCGGTACGGCTACTCCAACAGATCAAAGATTCTCCCATTTCATCAAAGACTTGAACTTCAAATTCTCCGACAATTGGGCCTCTGAGTTACTCCTCCAAACAGCCATCGCTATTACCGACAATAACACTTCTCGCATCCAACAATTCATGTGGATGCTCAATGAACTTGGCTCCCCGTACGGCGACACTAACCAAAAGCTGGCTTTCTACTTCCTTCAAGCCATGTTTAGTCGCGTCATTGACTCCGGTGACCGATGCTATCGAAGCTTGGTGGCAGTGTCGGAGAAACGATCTTGTTTCGAGTTAACGAGAAGGATAGAGCTGAAGTTTCAAGAGATGAGTCCATGGATGACTTTTGGTCATGTAGCTTCCAATGGTGCCATAATGGAGGCTTTTGAAGGAGAACGAAAGTTGCACATAATTGATATTAGCAACTCCTTTTGTACCCAATGGCCGACCTTACTCGAAGCTCTTGCGACACGATCAAACGCCGAAATTCCTCACTTGAAGCTAACAATGCTAATTACCGCCAAATCTAATACCACCCTCGAATCTCAGAAGAAGATAATGAAGGAGATAAGTAAAAGAATGGAGAAATTCGGCAGACTTATGGGCGTTCCGTTCAAATTCAAGCCCATATTCCACTCCGGCGACGTTTCCGATATCAATTTCGCCCAATTAGGCGTCAAGACTGGCGAAGCAGTCGCCGTCAACTGCGTCGGCGCGTTGCGCTCCGTCGCGCCGGTTGGTAACCGGCGAGATTTTCTGATATCGCTGTTCCGAGGTTTGCGGCCGAGGATAATCACGGTGGTGGAGGAGGAGGCGGATCTCGCCGGCGGCGGCGTTGACTTAGTCAAAGACGTTCAAGAGTGCTTACGGTGGTTTTCGGTTTACTTCGATTCGTTGGCCGGAAGCTTCCCGACTGCCAGCAATGAGCAGTTGGCGATTGAACGCGCCGCCGGACTTGCCGTCGTGGACTTGCTGGCGCGCGAGCCGGCGGAGTCGGTGGAGAGGCGCGAGACTGCGGCGCGTTGGGCGCGTCGTTTGCATGGGGGTGGTTTTAATGCAGTGTCATTTAGCGAAGATGTAAACGAGGACGTACGGGCGCTTTTGAGGAGGTATAAGGAGGGGTGGACGGTGACGGAGGACGGCGACGGCGCCGGAATATTCTTGGCCTGGAAGGAGCAGCCGGTGGTGTGGGCCGCCGCATGGGCTTCCGGACCGCCGGACGGAGAGAAGAGTCGCCGGAGCAGTTCAAGCGTGTGA

Protein sequence

MDALFFRQQQLVSDVQSYSNSTRNDVVVNSSSSFENSATDRDRNQNPYFLDQPTQECFSSLSVTEDEDHDHFSAASSSNHYRHPPHPHTATVSTTSIGTATPTDQRFSHFIKDLNFKFSDNWASELLLQTAIAITDNNTSRIQQFMWMLNELGSPYGDTNQKLAFYFLQAMFSRVIDSGDRCYRSLVAVSEKRSCFELTRRIELKFQEMSPWMTFGHVASNGAIMEAFEGERKLHIIDISNSFCTQWPTLLEALATRSNAEIPHLKLTMLITAKSNTTLESQKKIMKEISKRMEKFGRLMGVPFKFKPIFHSGDVSDINFAQLGVKTGEAVAVNCVGALRSVAPVGNRRDFLISLFRGLRPRIITVVEEEADLAGGGVDLVKDVQECLRWFSVYFDSLAGSFPTASNEQLAIERAAGLAVVDLLAREPAESVERRETAARWARRLHGGGFNAVSFSEDVNEDVRALLRRYKEGWTVTEDGDGAGIFLAWKEQPVVWAAAWASGPPDGEKSRRSSSSV

Homology

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BLAST of Moc02g13020 vs. NCBI nr
Match: XP_022947719.1 (protein SHORT-ROOT-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 629.4 bits (1622), Expect = 2.7e-176
Identity = 337/518 (65.06%), Postives = 394/518 (76.06%), Query Frame = 0


Query: 1   MDALFFRQQQLVSDVQSYSNSTRNDVVVNSSSSFENSATDRDRNQNPYFLDQPTQECFSS 60
           MD LF    +LVS++   S     D   NSS+S +NS    D   + + +  P ++CF+S
Sbjct: 1   MDTLF----RLVSNLHQPS-----DQSYNSSTSSKNSV---DLQNHCFLIPSPPEQCFTS 60

Query: 61  LSVTEDEDHDHFSAASSSNHYRHPPHPHTATVSTTSIGTATPTDQRFSHFIKDLNFKFSD 120
             +    D  HFSA+SSSNH     H H        I T   TD+ F+    D+N +FS+
Sbjct: 61  SFMV---DQQHFSASSSSNHRPDNDHVHQ---DHEYISTINSTDRWFAPL--DVNLEFSN 120

Query: 121 NWASELLLQTAIAITDNNTSRIQQFMWMLNELGSPYGDTNQKLAFYFLQAMFSRVIDSGD 180
            WAS L++QTAIAI DNN SRIQQ MWMLNELGSPYGD +QKLAFYFL+AMFS V +SG+
Sbjct: 121 GWASTLIVQTAIAIVDNNASRIQQLMWMLNELGSPYGDIDQKLAFYFLRAMFSHVTNSGE 180

Query: 181 RCYRSLVAVSEKRSCFELTRRIELKFQEMSPWMTFGHVASNGAIMEAFEGERKLHIIDIS 240
           RCYR+L  VSEKRSCF   RR+ LKFQE+SPWMTFGHVASNG IMEAFEGE+KLHIIDIS
Sbjct: 181 RCYRTLAMVSEKRSCFASMRRMVLKFQEVSPWMTFGHVASNGVIMEAFEGEKKLHIIDIS 240

Query: 241 NSFCTQWPTLLEALATRSNAEIPHLKLTMLITAKSNTTLESQKKIMKEISKRMEKFGRLM 300
           NSFCTQWPT LEALA+RS+ E PHL+LT L+ A+S+      KK+M+EIS+R+EKF RLM
Sbjct: 241 NSFCTQWPTFLEALASRSD-ETPHLRLTTLVAARSD------KKVMREISRRIEKFARLM 300

Query: 301 GVPFKFKPIFHSGDVSDINFAQLGVKTGEAVAVNCVGALRSVAPVGNRRDFLISLFRGLR 360
           GVPFKFK I++SGD+S +NF +LGV   EA+A+NCVGA RSV PV NRRDFLIS F  LR
Sbjct: 301 GVPFKFKAIYYSGDISQLNFTELGVNDDEALAINCVGAFRSVTPVENRRDFLISRFGALR 360

Query: 361 PRIITVVEEEADLAGGGVDLVKDVQECLRWFSVYFDSLAGSFPTASNEQLAIERAAGLAV 420
           PRIITVVEE+ADL   GVD VKDVQECLRWF VYFDSL GSFP+ S+E+L +ERAAG A+
Sbjct: 361 PRIITVVEEQADLDSDGVDFVKDVQECLRWFRVYFDSLDGSFPSTSDEKLMLERAAGRAI 420

Query: 421 VDLLAREPAESVERRETAARWARRLHGGGFNAVSFSEDVNEDVRALLRRYKEGWTVTEDG 480
           VDLLAR PAE VERRETAARWARRLH GGF  VSFSEDVN+DVRALLRRY++GWTV +DG
Sbjct: 421 VDLLARAPAECVERRETAARWARRLHEGGFKPVSFSEDVNDDVRALLRRYRDGWTVLDDG 480

Query: 481 D--GAGIFLAWKEQPVVWAAAWASGPPDGEKSRRSSSS 517
           +   AGIFLAWK Q VVWAAAW   P DGEKSR+SSSS
Sbjct: 481 EDADAGIFLAWKGQAVVWAAAWTPEPLDGEKSRQSSSS 491

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BLAST of Moc02g13020 vs. NCBI nr
Match: XP_023006995.1 (protein SHORT-ROOT-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 629.0 bits (1621), Expect = 3.6e-176
Identity = 337/518 (65.06%), Postives = 395/518 (76.25%), Query Frame = 0


Query: 1   MDALFFRQQQLVSDVQSYSNSTRNDVVVNSSSSFENSATDRDRNQNPYFLDQPTQECFSS 60
           MD LF    +LVS++Q       +D   NSS+S +NS    D   + +    P ++CF+S
Sbjct: 23  MDTLF----RLVSNLQP------SDQSYNSSTSSKNSV---DLQNHCFLNPPPPEQCFTS 82

Query: 61  LSVTEDEDHDHFSAASSSNHYRHPPHPHTATVSTTSIGTATPTDQRFSHFIKDLNFKFSD 120
             +    D  HFSA+SSSNH     H H        I T   TD+ F+    D+N +FS+
Sbjct: 83  SFMV---DQPHFSASSSSNHRPDKDHVHQ---DHEYISTINSTDRWFAPL--DVNLEFSN 142

Query: 121 NWASELLLQTAIAITDNNTSRIQQFMWMLNELGSPYGDTNQKLAFYFLQAMFSRVIDSGD 180
            WAS L++QTAIAI DNN S+IQQ MWMLNELGSPYGD +QKLAFYFL+AMFS V +SG+
Sbjct: 143 GWASTLIVQTAIAIVDNNASQIQQLMWMLNELGSPYGDIDQKLAFYFLRAMFSHVTNSGE 202

Query: 181 RCYRSLVAVSEKRSCFELTRRIELKFQEMSPWMTFGHVASNGAIMEAFEGERKLHIIDIS 240
           RCY++L  VSEKRSCF   RR+ LKFQE+SPWMTFGHVASNG IMEAFEGE+KLHIIDIS
Sbjct: 203 RCYQTLAMVSEKRSCFASMRRMVLKFQEVSPWMTFGHVASNGVIMEAFEGEKKLHIIDIS 262

Query: 241 NSFCTQWPTLLEALATRSNAEIPHLKLTMLITAKSNTTLESQKKIMKEISKRMEKFGRLM 300
           NSFCTQWPT LEALA+RS+ E PHL+LT L+ A+S+      KK+M+EIS+RMEKF RLM
Sbjct: 263 NSFCTQWPTFLEALASRSD-ETPHLRLTTLVVARSD------KKMMREISRRMEKFARLM 322

Query: 301 GVPFKFKPIFHSGDVSDINFAQLGVKTGEAVAVNCVGALRSVAPVGNRRDFLISLFRGLR 360
           GVPFKFK I++SGD+S +NF +LGV   EA+A+NCVGA RSV PV NRRDFLISLF  LR
Sbjct: 323 GVPFKFKAIYYSGDISQLNFTELGVNDDEALAINCVGAFRSVTPVDNRRDFLISLFGALR 382

Query: 361 PRIITVVEEEADLAGGGVDLVKDVQECLRWFSVYFDSLAGSFPTASNEQLAIERAAGLAV 420
           PRIITVVEE+ADL   GVD VKDVQECLRWF VYFDSL GSFP+ S+E+L +ERAAG A+
Sbjct: 383 PRIITVVEEQADLDSDGVDFVKDVQECLRWFRVYFDSLDGSFPSTSDEKLMLERAAGRAI 442

Query: 421 VDLLAREPAESVERRETAARWARRLHGGGFNAVSFSEDVNEDVRALLRRYKEGWTVTEDG 480
           VDLLAR PAE VERRETAARWARRLH GGF  VSFSEDVN+DVRALLR+YK+GWTV +DG
Sbjct: 443 VDLLARAPAECVERRETAARWARRLHEGGFKPVSFSEDVNDDVRALLRKYKDGWTVLDDG 502

Query: 481 DG--AGIFLAWKEQPVVWAAAWASGPPDGEKSRRSSSS 517
           +G  AGIFLAWK Q VVWAAAW   P DGEKSR+SS S
Sbjct: 503 EGADAGIFLAWKGQAVVWAAAWTPEPLDGEKSRQSSCS 512

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BLAST of Moc02g13020 vs. NCBI nr
Match: XP_038902075.1 (protein SHORT-ROOT-like [Benincasa hispida])

HSP 1 Score: 628.2 bits (1619), Expect = 6.1e-176
Identity = 339/516 (65.70%), Postives = 397/516 (76.94%), Query Frame = 0


Query: 1   MDALFFRQQQLVSDVQSYSNSTRNDVVVNSSSSFENSATDRDRNQNPYFLDQPTQECFSS 60
           MD LF    +LV+D++S    + N    N SSS  NS    D+N   Y  +  +QECF++
Sbjct: 1   MDTLF----RLVNDLESSDQYSYN----NYSSS--NSKNSSDQNHYYYLQNPQSQECFNN 60

Query: 61  LSVTEDEDHDHFSAASSSNHYRHP--PHPHTATVSTTSIGTA-TPTDQRFSHFIKDLNFK 120
           L +   E+ DHFSA+SSSNH+ H         T +TTS GTA TPT+        DLNF+
Sbjct: 61  LFM---EEEDHFSASSSSNHHHHHRLRQFQCLTTTTTSTGTANTPTE--------DLNFE 120

Query: 121 FSDNWASELLLQTAIAITDNNTSRIQQFMWMLNELGSPYGDTNQKLAFYFLQAMFSRVID 180
           FS+ W S +LLQTA AI DNNT RIQQ MWMLNELGSPYGD +QKLA+YFLQ MFSR+ D
Sbjct: 121 FSEEWGSTILLQTASAIVDNNTCRIQQLMWMLNELGSPYGDIDQKLAYYFLQGMFSRITD 180

Query: 181 SGDRCYRSLVAVSEKRSCFELTRRIELKFQEMSPWMTFGHVASNGAIMEAFEGERKLHII 240
           SG +CYR+L A SEKRSCFE  R++ LKF+E+SPWMTFGHVASNG+IMEA +GE+KLHII
Sbjct: 181 SGAKCYRTLAAASEKRSCFESMRKMVLKFEEVSPWMTFGHVASNGSIMEALQGEKKLHII 240

Query: 241 DI--SNSFCTQWPTLLEALATRSNAEIPHLKLTMLITAKSNTTLESQKKIMKEISKRMEK 300
           DI  ++SFCTQWPT +EALAT+S+ + PHL LT+L+ AKS+ TL + KK+M+EIS+R+EK
Sbjct: 241 DIAGNSSFCTQWPTFIEALATQSD-QTPHLTLTILVAAKSDETLRAHKKLMREISRRLEK 300

Query: 301 FGRLMGVPFKFKPIFHSGDVSDINFAQLGVKTGEAVAVNCVGALRSVAPVGNRRDFLISL 360
           F RLMGVPFKFKPI H GDVS  +F  L +K  EAVAVNC GALRSVAPV NRRDFLISL
Sbjct: 301 FARLMGVPFKFKPISHYGDVSHFDFTNLALKHDEAVAVNCAGALRSVAPVHNRRDFLISL 360

Query: 361 FRGLRPRIITVVEEEADL-AGGGVDLVKDVQECLRWFSVYFDSLAGSFPTASNEQLAIER 420
           FR LRPRIIT+VEEEADL A GGVD VK +QECLRWF +YFDSL GSFPTA++EQ  +ER
Sbjct: 361 FRALRPRIITIVEEEADLDAHGGVDFVKHLQECLRWFRLYFDSLDGSFPTATDEQFMLER 420

Query: 421 AAGLAVVDLLAREPAESVERRETAARWARRLHGGGFNAVSFSEDVNEDVRALLRRYKEGW 480
           AAG AVVDLLAR PAES ERRE A RWARR + GGF  VSFSEDV +DVRALLRRYK+GW
Sbjct: 421 AAGRAVVDLLARVPAESEERREIATRWARRFYNGGFKPVSFSEDVIDDVRALLRRYKDGW 480

Query: 481 TVTEDGDGAGIFLAWKEQPVVWAAAWASGPPDGEKS 511
           TVT DG GAG+FLAWK QPVVW AAWA G  DGEK+
Sbjct: 481 TVT-DGAGAGMFLAWKGQPVVWTAAWAPGQVDGEKT 493

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BLAST of Moc02g13020 vs. NCBI nr
Match: KAG7035198.1 (Protein SHORT-ROOT [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 627.9 bits (1618), Expect = 7.9e-176
Identity = 337/518 (65.06%), Postives = 393/518 (75.87%), Query Frame = 0


Query: 1   MDALFFRQQQLVSDVQSYSNSTRNDVVVNSSSSFENSATDRDRNQNPYFLDQPTQECFSS 60
           MD LF    +LVS++   S     D   NSS+S +NS    D   + +    P ++CF+S
Sbjct: 1   MDTLF----RLVSNLHQPS-----DQSYNSSTSSKNSV---DLQNHCFLNPSPPEQCFTS 60

Query: 61  LSVTEDEDHDHFSAASSSNHYRHPPHPHTATVSTTSIGTATPTDQRFSHFIKDLNFKFSD 120
             +    D  HFSA+SSSNH     H H        I T   TD+ F+    D+N +FS+
Sbjct: 61  SIMV---DQQHFSASSSSNHRPDNDHVHQ---HHEYISTVNSTDRWFAPL--DVNLEFSN 120

Query: 121 NWASELLLQTAIAITDNNTSRIQQFMWMLNELGSPYGDTNQKLAFYFLQAMFSRVIDSGD 180
            WAS L++QTAIAI DNN SRIQQ MWMLNELGSPYGD +QKLAFYFL+AMFS V +SG+
Sbjct: 121 GWASTLIVQTAIAIVDNNASRIQQLMWMLNELGSPYGDIDQKLAFYFLRAMFSHVTNSGE 180

Query: 181 RCYRSLVAVSEKRSCFELTRRIELKFQEMSPWMTFGHVASNGAIMEAFEGERKLHIIDIS 240
           RCYR+L  VSEKRSCF   RR+ LKFQE+SPWMTFGHVASNG IMEAFEGE+KLHIIDIS
Sbjct: 181 RCYRTLAMVSEKRSCFASMRRMVLKFQEVSPWMTFGHVASNGVIMEAFEGEKKLHIIDIS 240

Query: 241 NSFCTQWPTLLEALATRSNAEIPHLKLTMLITAKSNTTLESQKKIMKEISKRMEKFGRLM 300
           NSFCTQWPT LEALA+RS+ E PHL+LT L+ A+S+      KK+M+EIS+RMEKF RLM
Sbjct: 241 NSFCTQWPTFLEALASRSD-ETPHLRLTTLVAARSD------KKVMREISRRMEKFARLM 300

Query: 301 GVPFKFKPIFHSGDVSDINFAQLGVKTGEAVAVNCVGALRSVAPVGNRRDFLISLFRGLR 360
           GVPFKFK I++SG++S +NF +LGV   EA+A+NCVGA RSV PV NRRDFLISLF  LR
Sbjct: 301 GVPFKFKAIYYSGEISQLNFTELGVNDDEALAINCVGAFRSVTPVENRRDFLISLFGALR 360

Query: 361 PRIITVVEEEADLAGGGVDLVKDVQECLRWFSVYFDSLAGSFPTASNEQLAIERAAGLAV 420
           PRIITVVEE+ADL   GVD VKDVQECLRWF VYFDSL GSFP+ S+E+L +ERAAG A+
Sbjct: 361 PRIITVVEEQADLDSDGVDFVKDVQECLRWFRVYFDSLDGSFPSTSDEKLMLERAAGRAI 420

Query: 421 VDLLAREPAESVERRETAARWARRLHGGGFNAVSFSEDVNEDVRALLRRYKEGWTVTEDG 480
           VDLLAR PAE VERRETAARWARRLH GGF  VSFSEDVN+DVRALLRRY++GWTV +DG
Sbjct: 421 VDLLARAPAECVERRETAARWARRLHEGGFKPVSFSEDVNDDVRALLRRYRDGWTVLDDG 480

Query: 481 D--GAGIFLAWKEQPVVWAAAWASGPPDGEKSRRSSSS 517
           +   AGIFLAWK Q VVWAAAW   P DGEKSR+SS S
Sbjct: 481 EDADAGIFLAWKGQAVVWAAAWTPEPLDGEKSRQSSCS 491

[Close]

BLAST of Moc02g13020 vs. NCBI nr
Match: XP_023533110.1 (protein SHORT-ROOT-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 627.1 bits (1616), Expect = 1.4e-175
Identity = 337/519 (64.93%), Postives = 393/519 (75.72%), Query Frame = 0


Query: 1   MDALFFRQQQLVSDVQSYSNSTRNDVVVNSSSSFENSATDRDRNQNPYFLDQPTQECFSS 60
           MD LF    +LVS++Q       +D   NSS+S +NS    D   + +    P ++CF+S
Sbjct: 1   MDTLF----RLVSNLQP------SDQSYNSSTSSKNSV---DLQNHCFLNPPPPEQCFTS 60

Query: 61  LSVTEDEDHDHFSAASSSNHYRHPPHPHTATVSTTSIGTATPTDQRFSHFIKDLNFKFSD 120
             +    D  HFSA+SSSNH     H H        I T   TD+ F+    D+N +FS+
Sbjct: 61  SFMV---DQQHFSASSSSNHRLDNDHVHR---DHEYISTVNSTDRWFAPL--DVNLEFSN 120

Query: 121 NWASELLLQTAIAITDNNTSRIQQFMWMLNELGSPYGDTNQKLAFYFLQAMFSRVIDSGD 180
            WAS L++Q AIAI DNN SRIQQ MWMLNELGSPYGD +QKLAFYFL+AMFS V +SG+
Sbjct: 121 GWASTLIVQIAIAIVDNNASRIQQLMWMLNELGSPYGDIDQKLAFYFLRAMFSHVTNSGE 180

Query: 181 RCYRSLVAVSEKRSCFELTRRIELKFQEMSPWMTFGHVASNGAIMEAFEGERKLHIIDIS 240
           RCYR+L  VSEKRSCF   RR+ LKFQE+SPWMTFGHVASNG IMEAFEGE+KLHIIDIS
Sbjct: 181 RCYRTLAMVSEKRSCFASMRRMVLKFQEVSPWMTFGHVASNGVIMEAFEGEKKLHIIDIS 240

Query: 241 NSFCTQWPTLLEALATRSNAEIPHLKLTMLITAKSNTTLESQKKIMKEISKRMEKFGRLM 300
           NSFCTQWPT LEALA+RS+ E PHL+LT L+ A+S+      KK+M+EIS+RMEKF RLM
Sbjct: 241 NSFCTQWPTFLEALASRSD-ETPHLRLTTLVAARSD------KKVMREISRRMEKFARLM 300

Query: 301 GVPFKFKPIFHSGDVSDINFAQLGVKTGEAVAVNCVGALRSVAPVGNRRDFLISLFRGLR 360
           GVPFKFK I++SGD+S +NF +LGV   EA+A+NC GA RSV PV NRRDFLISLF  LR
Sbjct: 301 GVPFKFKAIYYSGDISQLNFTELGVNDDEALAINCAGAFRSVTPVDNRRDFLISLFGALR 360

Query: 361 PRIITVVEEEADLAGGGVDLVKDVQECLRWFSVYFDSLAGSFPTASNEQLAIERAAGLAV 420
           PRIITVVEE ADL   GVD VKDVQECLRWF VYFDSL GSFP+ S+E+L +ERAAG A+
Sbjct: 361 PRIITVVEEPADLDSDGVDFVKDVQECLRWFRVYFDSLDGSFPSTSDEKLMLERAAGRAI 420

Query: 421 VDLLAREPAESVERRETAARWARRLHGGGFNAVSFSEDVNEDVRALLRRYKEGWTVTEDG 480
           VDLLAR PAE VERRETAARWARRLH GGF  VSFSEDVN+DVRALLRRY++GWTV +DG
Sbjct: 421 VDLLARAPAECVERRETAARWARRLHEGGFKPVSFSEDVNDDVRALLRRYRDGWTVLDDG 480

Query: 481 D--GAGIFLAWKEQPVVWAAAWASGPPDGEKSRRSSSSV 518
           +   AGIFLAWK Q VVWAAAWA    DGEKSR+SSSS+
Sbjct: 481 EDADAGIFLAWKGQAVVWAAAWAPESVDGEKSRQSSSSL 491

[Close]

BLAST of Moc02g13020 vs. ExPASy Swiss-Prot
Match: Q9SZF7 (Protein SHORT-ROOT OS=Arabidopsis thaliana OX=3702 GN=SHR PE=1 SV=1)

HSP 1 Score: 464.9 bits (1195), Expect = 1.2e-129
Identity = 268/540 (49.63%), Postives = 345/540 (63.89%), Query Frame = 0


Query: 1   MDALFFRQQQLVSDVQSYSNSTRNDVVVNSSSSFENSATDRDRNQNPYFLDQP----TQE 60
           MD LF    +LVS  Q   +   + ++ N SS    S T     Q  Y  + P     +E
Sbjct: 1   MDTLF----RLVSLQQQQQS---DSIITNQSSLSRTSTTTTGSPQTAYHYNFPQNDVVEE 60

Query: 61  CFSSLSVTEDEDHDHFSAASSSNHYRH------------PPHPHTATVSTTSIGTATPT- 120
           CF+       ++ D  S++S  NH+ H            P   H AT ST S   A    
Sbjct: 61  CFNFFM----DEEDLSSSSSHHNHHNHNNPNTYYSPFTTPTQYHPATSSTPSSTAAAAAL 120

Query: 121 ------------DQRFSHFIKDLNFKFSDN--WASELLLQTAIAITDNNTSRIQQFMWML 180
                          FS      +F FS N  WA  +LL+ A A +D +T+R QQ +W L
Sbjct: 121 ASPYSSSGHHNDPSAFSIPQTPPSFDFSANAKWADSVLLEAARAFSDKDTARAQQILWTL 180

Query: 181 NELGSPYGDTNQKLAFYFLQAMFSRVIDSGDRCYRSLV--AVSEKRSCFELTRRIELKFQ 240
           NEL SPYGDT QKLA YFLQA+F+R+  SG+RCYR++V  A +EK   FE TR+  LKFQ
Sbjct: 181 NELSSPYGDTEQKLASYFLQALFNRMTGSGERCYRTMVTAAATEKTCSFESTRKTVLKFQ 240

Query: 241 EMSPWMTFGHVASNGAIMEAFEGERKLHIIDISNSFCTQWPTLLEALATRSNAEIPHLKL 300
           E+SPW TFGHVA+NGAI+EA +GE K+HI+DIS++FCTQWPTLLEALATRS+ + PHL+L
Sbjct: 241 EVSPWATFGHVAANGAILEAVDGEAKIHIVDISSTFCTQWPTLLEALATRSD-DTPHLRL 300

Query: 301 TMLITA-KSNTTLESQKKIMKEISKRMEKFGRLMGVPFKFKPIFHSGDVSDINFAQLGVK 360
           T ++ A K      +  ++MKEI  RMEKF RLMGVPFKF  I H GD+S+ +  +L VK
Sbjct: 301 TTVVVANKFVNDQTASHRMMKEIGNRMEKFARLMGVPFKFNIIHHVGDLSEFDLNELDVK 360

Query: 361 TGEAVAVNCVGALRSVAPVGNRRDFLISLFRGLRPRIITVVEEEADLAG---GGVD--LV 420
             E +A+NCVGA+  +A  G+ RD +IS FR LRPRI+TVVEEEADL G   GG D   +
Sbjct: 361 PDEVLAINCVGAMHGIASRGSPRDAVISSFRRLRPRIVTVVEEEADLVGEEEGGFDDEFL 420

Query: 421 KDVQECLRWFSVYFDSLAGSFPTASNEQLAIERAAGLAVVDLLAREPAESVERRETAARW 480
           +   ECLRWF V F+S   SFP  SNE+L +ERAAG A+VDL+A EP++S ERRETA +W
Sbjct: 421 RGFGECLRWFRVCFESWEESFPRTSNERLMLERAAGRAIVDLVACEPSDSTERRETARKW 480

Query: 481 ARRLHGGGFNAVSFSEDVNEDVRALLRRYKEG-WTVTEDGDGAGIFLAWKEQPVVWAAAW 501
           +RR+   GF AV +S++V +DVRALLRRYKEG W++ +  D AGIFL W++QPVVWA+AW
Sbjct: 481 SRRMRNSGFGAVGYSDEVADDVRALLRRYKEGVWSMVQCPDAAGIFLCWRDQPVVWASAW 528

[Close]

BLAST of Moc02g13020 vs. ExPASy Swiss-Prot
Match: A2YN56 (Protein SHORT-ROOT 1 OS=Oryza sativa subsp. indica OX=39946 GN=SHR1 PE=3 SV=1)

HSP 1 Score: 426.8 bits (1096), Expect = 3.5e-118
Identity = 241/523 (46.08%), Postives = 322/523 (61.57%), Query Frame = 0


Query: 48  YFLDQPTQECFSSLSVTEDEDHDHFSAASSSNHYRH--PPHPHTATVSTTSIGTA-TPTD 107
           Y+L+   +EC ++       D D FS++SSS H+ H  P        S+T  GTA TP  
Sbjct: 79  YYLEPYQEECGNAPHHQLYMDED-FSSSSSSRHFHHGAPVQQQQPPASSTPTGTAPTPPL 138

Query: 108 QRFS---------------HFIKDLNFKFSD---------------------NWASELLL 167
              S                F  DLN  FS                       WAS+LLL
Sbjct: 139 STSSTAAGAGHGLFEAADLSFPPDLNLDFSSPASSSGGGTASSGAVGGGGGGRWASQLLL 198

Query: 168 QTAIAITDNNTSRIQQFMWMLNELGSPYGDTNQKLAFYFLQAMFSRVIDSGDRCYRSLVA 227
           + A ++   ++ R+QQ MWMLNEL SPYGD  QKLA YFLQ +F+R+  SG R  R+L A
Sbjct: 199 ECARSVAARDSQRVQQLMWMLNELASPYGDVEQKLASYFLQGLFARLTASGQRTLRTLAA 258

Query: 228 VSEKRSCFELTRRIELKFQEMSPWMTFGHVASNGAIMEAF--------EGERKLHIIDIS 287
            S++ + F+ TRR  L+FQE+SPW +FGHVA+NGAI+E+F           ++ HI+D+S
Sbjct: 259 ASDRNTSFDSTRRTALRFQELSPWSSFGHVAANGAILESFLEVAAAASSETQRFHILDLS 318

Query: 288 NSFCTQWPTLLEALATRSNAEIPHLKLTMLITAKSNTTLESQKKIMKEISKRMEKFGRLM 347
           N+FCTQWPTLLEALATRS  E PHL +T +++A  +    + +++M+EI +RMEKF RLM
Sbjct: 319 NTFCTQWPTLLEALATRSADETPHLSITTVVSAAPSAPTAAVQRVMREIGQRMEKFARLM 378

Query: 348 GVPFKFKPIFHSGDVSDINFAQLGVKTG---EAVAVNCVGALRSVAP-VGNRRDFLISLF 407
           GVPF+F+ + HSGD+++++   L ++ G    A+AVNCV +LR V P    RRD   +  
Sbjct: 379 GVPFRFRAVHHSGDLAELDLDALDLREGGATTALAVNCVNSLRGVVPGRARRRDAFAASL 438

Query: 408 RGLRPRIITVVEEEADLAGGGVD--------------LVKDVQECLRWFSVYFDSLAGSF 467
           R L PR++TVVEEEADL     D               +K   E LR+FS Y DSL  SF
Sbjct: 439 RRLDPRVVTVVEEEADLVASDPDASSATEEGGDTEAAFLKVFGEGLRFFSAYMDSLEESF 498

Query: 468 PTASNEQLAIERAAGLAVVDLLAREPAESVERRETAARWARRLHGGGFNAVSFSEDVNED 501
           P  SNE+LA+ER AG A+VDL++   +ES+ERRETAA WARR+   GF+ V+FSEDV +D
Sbjct: 499 PKTSNERLALERGAGRAIVDLVSCPASESMERRETAASWARRMRSAGFSPVAFSEDVADD 558

[Close]

BLAST of Moc02g13020 vs. ExPASy Swiss-Prot
Match: Q8H2X8 (Protein SHORT-ROOT 1 OS=Oryza sativa subsp. japonica OX=39947 GN=SHR1 PE=1 SV=2)

HSP 1 Score: 424.1 bits (1089), Expect = 2.3e-117
Identity = 239/523 (45.70%), Postives = 322/523 (61.57%), Query Frame = 0


Query: 48  YFLDQPTQECFSSLSVTEDEDHDHFSAASSSNHYRH--------PPHPHTAT-------- 107
           Y+L+   +EC ++       D D FS++SSS H+ H        PP   T T        
Sbjct: 79  YYLEPYQEECGNAPHHQLYMDED-FSSSSSSRHFHHGARVQQQQPPASSTPTGTAPTPPL 138

Query: 108 -VSTTSIGTATPTDQRFS-HFIKDLNFKFSD---------------------NWASELLL 167
             S+T+ G      +     F  DLN  FS                       WAS+LLL
Sbjct: 139 STSSTAAGAGHGLFEAADLSFPPDLNLDFSSPASSSGGGTASSGAVGGGGGGRWASQLLL 198

Query: 168 QTAIAITDNNTSRIQQFMWMLNELGSPYGDTNQKLAFYFLQAMFSRVIDSGDRCYRSLVA 227
           + A ++   ++ R+QQ MWMLNEL SPYGD  QKLA YFLQ +F+R+  SG R  R+L A
Sbjct: 199 ECARSVAARDSQRVQQLMWMLNELASPYGDVEQKLASYFLQGLFARLTASGPRTLRTLAA 258

Query: 228 VSEKRSCFELTRRIELKFQEMSPWMTFGHVASNGAIMEAF--------EGERKLHIIDIS 287
            S++ + F+ TRR  L+FQE+SPW +FGHVA+NGAI+E+F           ++ HI+D+S
Sbjct: 259 ASDRNTSFDSTRRTALRFQELSPWSSFGHVAANGAILESFLEVAAAASSETQRFHILDLS 318

Query: 288 NSFCTQWPTLLEALATRSNAEIPHLKLTMLITAKSNTTLESQKKIMKEISKRMEKFGRLM 347
           N+FCTQWPTLLEALATRS  E PHL +T +++A  +    + +++M+EI +RMEKF RLM
Sbjct: 319 NTFCTQWPTLLEALATRSADETPHLSITTVVSAAPSAPTAAVQRVMREIGQRMEKFARLM 378

Query: 348 GVPFKFKPIFHSGDVSDINFAQLGVKTG---EAVAVNCVGALRSVAP-VGNRRDFLISLF 407
           GVPF+F+ + HSGD+++++   L ++ G    A+AVNCV +LR V P    RRD   +  
Sbjct: 379 GVPFRFRAVHHSGDLAELDLDALDLREGGATTALAVNCVNSLRGVVPGRARRRDAFAASL 438

Query: 408 RGLRPRIITVVEEEADLAGGGVD--------------LVKDVQECLRWFSVYFDSLAGSF 467
           R L PR++TVVEEEADL     D               +K   E LR+FS Y DSL  SF
Sbjct: 439 RRLDPRVVTVVEEEADLVASDPDASSATEEGGDTEAAFLKVFGEGLRFFSAYMDSLEESF 498

Query: 468 PTASNEQLAIERAAGLAVVDLLAREPAESVERRETAARWARRLHGGGFNAVSFSEDVNED 501
           P  SNE+LA+ER AG A+VDL++   +ES+ERRETAA WARR+   GF+ V+FSEDV +D
Sbjct: 499 PKTSNERLALERGAGRAIVDLVSCPASESMERRETAASWARRMRSAGFSPVAFSEDVADD 558

[Close]

BLAST of Moc02g13020 vs. ExPASy Swiss-Prot
Match: Q75I13 (Protein SHORT-ROOT 2 OS=Oryza sativa subsp. japonica OX=39947 GN=SHR2 PE=1 SV=1)

HSP 1 Score: 410.2 bits (1053), Expect = 3.4e-113
Identity = 234/517 (45.26%), Postives = 310/517 (59.96%), Query Frame = 0


Query: 55  QECFSSLSVTEDEDHDHFSAASSSNHYRH----------PPHPHTATVSTTSIGTATPTD 114
           +EC +      DED   FS++SSS  +            PP P   T S    G     D
Sbjct: 93  EECGNGHQFYMDED---FSSSSSSRQFHSGTGAPSSAPVPPPPSATTSSAGGHGLFEAAD 152

Query: 115 QRFSHFIKDLNF--------------------KFSDNWASELLLQTAIAITDNNTSRIQQ 174
             F      L+F                      S  WA++LL++ A A+   ++ R+QQ
Sbjct: 153 FSFPQVDISLDFGGSPAVPSSSGAGAGAGAAPSSSGRWAAQLLMECARAVAGRDSQRVQQ 212

Query: 175 FMWMLNELGSPYGDTNQKLAFYFLQAMFSRVIDSGDRCYRSLVAVSEKRSCFELTRRIEL 234
            MWMLNEL SPYGD +QKLA YFLQ +F+R+  SG R  R+L   S++ + F+ TRR  L
Sbjct: 213 LMWMLNELASPYGDVDQKLASYFLQGLFARLTTSGPRTLRTLATASDRNASFDSTRRTAL 272

Query: 235 KFQEMSPWMTFGHVASNGAIMEAF-------------------EGERKLHIIDISNSFCT 294
           KFQE+SPW  FGHVA+NGAI+E+F                       +LHI+D+SN+FCT
Sbjct: 273 KFQELSPWTPFGHVAANGAILESFLEAAAAGAAASSSSSSSSSTPPTRLHILDLSNTFCT 332

Query: 295 QWPTLLEALATRSNAEIPHLKLTMLITAKSNTTLESQKKIMKEISKRMEKFGRLMGVPFK 354
           QWPTLLEALATRS+ + PHL +T ++   + +   + +++M+EI +R+EKF RLMGVPF 
Sbjct: 333 QWPTLLEALATRSSDDTPHLSITTVVPTAAPSA--AAQRVMREIGQRLEKFARLMGVPFS 392

Query: 355 FKPIFHSGDVSDINFAQLGVKTG---EAVAVNCVGALRSVAPVGNRRDFLISLFRGLRPR 414
           F+ + HSGD++D++ A L ++ G    A+AVNCV ALR VA     RD  ++  R L PR
Sbjct: 393 FRAVHHSGDLADLDLAALDLREGGATAALAVNCVNALRGVA---RGRDAFVASLRRLEPR 452

Query: 415 IITVVEEEADLAGGGVD----------LVKDVQECLRWFSVYFDSLAGSFPTASNEQLAI 474
           ++TVVEEEADLA    D           VK   E LR+FS Y DSL  SFP  SNE+L++
Sbjct: 453 VVTVVEEEADLAAPEADASSEADTDAAFVKVFGEGLRFFSAYMDSLEESFPKTSNERLSL 512

Query: 475 ERAAGLAVVDLLAREPAESVERRETAARWARRLHGGGFNAVSFSEDVNEDVRALLRRYKE 501
           ERA G A+VDL++   ++S ERRETAA WARR+   GF+  +FSEDV +DVR+LLRRYKE
Sbjct: 513 ERAVGRAIVDLVSCPASQSAERRETAASWARRMRSAGFSPAAFSEDVADDVRSLLRRYKE 572

[Close]

BLAST of Moc02g13020 vs. ExPASy Swiss-Prot
Match: A2XIA8 (Protein SHORT-ROOT 2 OS=Oryza sativa subsp. indica OX=39946 GN=SHR2 PE=3 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 7.6e-113
Identity = 233/517 (45.07%), Postives = 310/517 (59.96%), Query Frame = 0


Query: 55  QECFSSLSVTEDEDHDHFSAASSSNHYRH----------PPHPHTATVSTTSIGTATPTD 114
           +EC +      DED   FS++SSS  +            PP P   T S    G     D
Sbjct: 93  EECGNGHQFYMDED---FSSSSSSRQFHSGTGAPSSAPVPPPPSATTSSAGGHGLFEAAD 152

Query: 115 QRFSHFIKDLNF--------------------KFSDNWASELLLQTAIAITDNNTSRIQQ 174
             F      L+F                      S  WA++LL++ A A+   ++ R+QQ
Sbjct: 153 FSFPQVDISLDFGGSPAVPSSSGAGAGAGAAPSSSGRWAAQLLMECARAVAGRDSQRVQQ 212

Query: 175 FMWMLNELGSPYGDTNQKLAFYFLQAMFSRVIDSGDRCYRSLVAVSEKRSCFELTRRIEL 234
            MWMLNEL SPYGD +QKLA YFLQ +F+R+  SG R  R+L   S++ + F+ TRR  L
Sbjct: 213 LMWMLNELASPYGDVDQKLASYFLQGLFARLTTSGPRTLRTLATASDRNASFDSTRRTAL 272

Query: 235 KFQEMSPWMTFGHVASNGAIMEAF-------------------EGERKLHIIDISNSFCT 294
           KFQE+SPW  FGHVA+NGAI+E+F                       +LHI+D+SN+FCT
Sbjct: 273 KFQELSPWTPFGHVAANGAILESFLEAAAAGAAAASSSSSSSSTPPTRLHILDLSNTFCT 332

Query: 295 QWPTLLEALATRSNAEIPHLKLTMLITAKSNTTLESQKKIMKEISKRMEKFGRLMGVPFK 354
           QWPTLLEALATRS+ + PHL +T ++   + +   + +++M+EI +R+EKF RLMGVPF 
Sbjct: 333 QWPTLLEALATRSSDDTPHLSITTVVPTAAPSA--AAQRVMREIGQRLEKFARLMGVPFS 392

Query: 355 FKPIFHSGDVSDINFAQLGVKTG---EAVAVNCVGALRSVAPVGNRRDFLISLFRGLRPR 414
           F+ + H+GD++D++ A L ++ G    A+AVNCV ALR VA     RD  ++  R L PR
Sbjct: 393 FRAVHHAGDLADLDLAALDLREGGATAALAVNCVNALRGVA---RGRDAFVASLRRLEPR 452

Query: 415 IITVVEEEADLAGGGVD----------LVKDVQECLRWFSVYFDSLAGSFPTASNEQLAI 474
           ++TVVEEEADLA    D           VK   E LR+FS Y DSL  SFP  SNE+L++
Sbjct: 453 VVTVVEEEADLAAPEADASSEADTDAAFVKVFGEGLRFFSAYMDSLEESFPKTSNERLSL 512

Query: 475 ERAAGLAVVDLLAREPAESVERRETAARWARRLHGGGFNAVSFSEDVNEDVRALLRRYKE 501
           ERA G A+VDL++   ++S ERRETAA WARR+   GF+  +FSEDV +DVR+LLRRYKE
Sbjct: 513 ERAVGRAIVDLVSCPASQSAERRETAASWARRMRSAGFSPAAFSEDVADDVRSLLRRYKE 572

[Close]

BLAST of Moc02g13020 vs. ExPASy TrEMBL
Match: A0A6J1G7N4 (protein SHORT-ROOT-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451501 PE=3 SV=1)

HSP 1 Score: 629.4 bits (1622), Expect = 1.3e-176
Identity = 337/518 (65.06%), Postives = 394/518 (76.06%), Query Frame = 0


Query: 1   MDALFFRQQQLVSDVQSYSNSTRNDVVVNSSSSFENSATDRDRNQNPYFLDQPTQECFSS 60
           MD LF    +LVS++   S     D   NSS+S +NS    D   + + +  P ++CF+S
Sbjct: 1   MDTLF----RLVSNLHQPS-----DQSYNSSTSSKNSV---DLQNHCFLIPSPPEQCFTS 60

Query: 61  LSVTEDEDHDHFSAASSSNHYRHPPHPHTATVSTTSIGTATPTDQRFSHFIKDLNFKFSD 120
             +    D  HFSA+SSSNH     H H        I T   TD+ F+    D+N +FS+
Sbjct: 61  SFMV---DQQHFSASSSSNHRPDNDHVHQ---DHEYISTINSTDRWFAPL--DVNLEFSN 120

Query: 121 NWASELLLQTAIAITDNNTSRIQQFMWMLNELGSPYGDTNQKLAFYFLQAMFSRVIDSGD 180
            WAS L++QTAIAI DNN SRIQQ MWMLNELGSPYGD +QKLAFYFL+AMFS V +SG+
Sbjct: 121 GWASTLIVQTAIAIVDNNASRIQQLMWMLNELGSPYGDIDQKLAFYFLRAMFSHVTNSGE 180

Query: 181 RCYRSLVAVSEKRSCFELTRRIELKFQEMSPWMTFGHVASNGAIMEAFEGERKLHIIDIS 240
           RCYR+L  VSEKRSCF   RR+ LKFQE+SPWMTFGHVASNG IMEAFEGE+KLHIIDIS
Sbjct: 181 RCYRTLAMVSEKRSCFASMRRMVLKFQEVSPWMTFGHVASNGVIMEAFEGEKKLHIIDIS 240

Query: 241 NSFCTQWPTLLEALATRSNAEIPHLKLTMLITAKSNTTLESQKKIMKEISKRMEKFGRLM 300
           NSFCTQWPT LEALA+RS+ E PHL+LT L+ A+S+      KK+M+EIS+R+EKF RLM
Sbjct: 241 NSFCTQWPTFLEALASRSD-ETPHLRLTTLVAARSD------KKVMREISRRIEKFARLM 300

Query: 301 GVPFKFKPIFHSGDVSDINFAQLGVKTGEAVAVNCVGALRSVAPVGNRRDFLISLFRGLR 360
           GVPFKFK I++SGD+S +NF +LGV   EA+A+NCVGA RSV PV NRRDFLIS F  LR
Sbjct: 301 GVPFKFKAIYYSGDISQLNFTELGVNDDEALAINCVGAFRSVTPVENRRDFLISRFGALR 360

Query: 361 PRIITVVEEEADLAGGGVDLVKDVQECLRWFSVYFDSLAGSFPTASNEQLAIERAAGLAV 420
           PRIITVVEE+ADL   GVD VKDVQECLRWF VYFDSL GSFP+ S+E+L +ERAAG A+
Sbjct: 361 PRIITVVEEQADLDSDGVDFVKDVQECLRWFRVYFDSLDGSFPSTSDEKLMLERAAGRAI 420

Query: 421 VDLLAREPAESVERRETAARWARRLHGGGFNAVSFSEDVNEDVRALLRRYKEGWTVTEDG 480
           VDLLAR PAE VERRETAARWARRLH GGF  VSFSEDVN+DVRALLRRY++GWTV +DG
Sbjct: 421 VDLLARAPAECVERRETAARWARRLHEGGFKPVSFSEDVNDDVRALLRRYRDGWTVLDDG 480

Query: 481 D--GAGIFLAWKEQPVVWAAAWASGPPDGEKSRRSSSS 517
           +   AGIFLAWK Q VVWAAAW   P DGEKSR+SSSS
Sbjct: 481 EDADAGIFLAWKGQAVVWAAAWTPEPLDGEKSRQSSSS 491

[Close]

BLAST of Moc02g13020 vs. ExPASy TrEMBL
Match: A0A6J1L1R5 (protein SHORT-ROOT-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499621 PE=3 SV=1)

HSP 1 Score: 629.0 bits (1621), Expect = 1.7e-176
Identity = 337/518 (65.06%), Postives = 395/518 (76.25%), Query Frame = 0


Query: 1   MDALFFRQQQLVSDVQSYSNSTRNDVVVNSSSSFENSATDRDRNQNPYFLDQPTQECFSS 60
           MD LF    +LVS++Q       +D   NSS+S +NS    D   + +    P ++CF+S
Sbjct: 23  MDTLF----RLVSNLQP------SDQSYNSSTSSKNSV---DLQNHCFLNPPPPEQCFTS 82

Query: 61  LSVTEDEDHDHFSAASSSNHYRHPPHPHTATVSTTSIGTATPTDQRFSHFIKDLNFKFSD 120
             +    D  HFSA+SSSNH     H H        I T   TD+ F+    D+N +FS+
Sbjct: 83  SFMV---DQPHFSASSSSNHRPDKDHVHQ---DHEYISTINSTDRWFAPL--DVNLEFSN 142

Query: 121 NWASELLLQTAIAITDNNTSRIQQFMWMLNELGSPYGDTNQKLAFYFLQAMFSRVIDSGD 180
            WAS L++QTAIAI DNN S+IQQ MWMLNELGSPYGD +QKLAFYFL+AMFS V +SG+
Sbjct: 143 GWASTLIVQTAIAIVDNNASQIQQLMWMLNELGSPYGDIDQKLAFYFLRAMFSHVTNSGE 202

Query: 181 RCYRSLVAVSEKRSCFELTRRIELKFQEMSPWMTFGHVASNGAIMEAFEGERKLHIIDIS 240
           RCY++L  VSEKRSCF   RR+ LKFQE+SPWMTFGHVASNG IMEAFEGE+KLHIIDIS
Sbjct: 203 RCYQTLAMVSEKRSCFASMRRMVLKFQEVSPWMTFGHVASNGVIMEAFEGEKKLHIIDIS 262

Query: 241 NSFCTQWPTLLEALATRSNAEIPHLKLTMLITAKSNTTLESQKKIMKEISKRMEKFGRLM 300
           NSFCTQWPT LEALA+RS+ E PHL+LT L+ A+S+      KK+M+EIS+RMEKF RLM
Sbjct: 263 NSFCTQWPTFLEALASRSD-ETPHLRLTTLVVARSD------KKMMREISRRMEKFARLM 322

Query: 301 GVPFKFKPIFHSGDVSDINFAQLGVKTGEAVAVNCVGALRSVAPVGNRRDFLISLFRGLR 360
           GVPFKFK I++SGD+S +NF +LGV   EA+A+NCVGA RSV PV NRRDFLISLF  LR
Sbjct: 323 GVPFKFKAIYYSGDISQLNFTELGVNDDEALAINCVGAFRSVTPVDNRRDFLISLFGALR 382

Query: 361 PRIITVVEEEADLAGGGVDLVKDVQECLRWFSVYFDSLAGSFPTASNEQLAIERAAGLAV 420
           PRIITVVEE+ADL   GVD VKDVQECLRWF VYFDSL GSFP+ S+E+L +ERAAG A+
Sbjct: 383 PRIITVVEEQADLDSDGVDFVKDVQECLRWFRVYFDSLDGSFPSTSDEKLMLERAAGRAI 442

Query: 421 VDLLAREPAESVERRETAARWARRLHGGGFNAVSFSEDVNEDVRALLRRYKEGWTVTEDG 480
           VDLLAR PAE VERRETAARWARRLH GGF  VSFSEDVN+DVRALLR+YK+GWTV +DG
Sbjct: 443 VDLLARAPAECVERRETAARWARRLHEGGFKPVSFSEDVNDDVRALLRKYKDGWTVLDDG 502

Query: 481 DG--AGIFLAWKEQPVVWAAAWASGPPDGEKSRRSSSS 517
           +G  AGIFLAWK Q VVWAAAW   P DGEKSR+SS S
Sbjct: 503 EGADAGIFLAWKGQAVVWAAAWTPEPLDGEKSRQSSCS 512

[Close]

BLAST of Moc02g13020 vs. ExPASy TrEMBL
Match: A0A6J1KZB8 (protein SHORT-ROOT-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111499621 PE=3 SV=1)

HSP 1 Score: 621.7 bits (1602), Expect = 2.8e-174
Identity = 332/518 (64.09%), Postives = 389/518 (75.10%), Query Frame = 0


Query: 1   MDALFFRQQQLVSDVQSYSNSTRNDVVVNSSSSFENSATDRDRNQNPYFLDQPTQECFSS 60
           MD LF    +LVS++Q       +D   NSS+S +NS    D   + +    P ++CF+S
Sbjct: 23  MDTLF----RLVSNLQP------SDQSYNSSTSSKNSV---DLQNHCFLNPPPPEQCFTS 82

Query: 61  LSVTEDEDHDHFSAASSSNHYRHPPHPHTATVSTTSIGTATPTDQRFSHFIKDLNFKFSD 120
             +    D  HFSA+SSSNH     H H                    H   ++N +FS+
Sbjct: 83  SFMV---DQPHFSASSSSNHRPDKDHVHQ------------------DHEYINVNLEFSN 142

Query: 121 NWASELLLQTAIAITDNNTSRIQQFMWMLNELGSPYGDTNQKLAFYFLQAMFSRVIDSGD 180
            WAS L++QTAIAI DNN S+IQQ MWMLNELGSPYGD +QKLAFYFL+AMFS V +SG+
Sbjct: 143 GWASTLIVQTAIAIVDNNASQIQQLMWMLNELGSPYGDIDQKLAFYFLRAMFSHVTNSGE 202

Query: 181 RCYRSLVAVSEKRSCFELTRRIELKFQEMSPWMTFGHVASNGAIMEAFEGERKLHIIDIS 240
           RCY++L  VSEKRSCF   RR+ LKFQE+SPWMTFGHVASNG IMEAFEGE+KLHIIDIS
Sbjct: 203 RCYQTLAMVSEKRSCFASMRRMVLKFQEVSPWMTFGHVASNGVIMEAFEGEKKLHIIDIS 262

Query: 241 NSFCTQWPTLLEALATRSNAEIPHLKLTMLITAKSNTTLESQKKIMKEISKRMEKFGRLM 300
           NSFCTQWPT LEALA+RS+ E PHL+LT L+ A+S+      KK+M+EIS+RMEKF RLM
Sbjct: 263 NSFCTQWPTFLEALASRSD-ETPHLRLTTLVVARSD------KKMMREISRRMEKFARLM 322

Query: 301 GVPFKFKPIFHSGDVSDINFAQLGVKTGEAVAVNCVGALRSVAPVGNRRDFLISLFRGLR 360
           GVPFKFK I++SGD+S +NF +LGV   EA+A+NCVGA RSV PV NRRDFLISLF  LR
Sbjct: 323 GVPFKFKAIYYSGDISQLNFTELGVNDDEALAINCVGAFRSVTPVDNRRDFLISLFGALR 382

Query: 361 PRIITVVEEEADLAGGGVDLVKDVQECLRWFSVYFDSLAGSFPTASNEQLAIERAAGLAV 420
           PRIITVVEE+ADL   GVD VKDVQECLRWF VYFDSL GSFP+ S+E+L +ERAAG A+
Sbjct: 383 PRIITVVEEQADLDSDGVDFVKDVQECLRWFRVYFDSLDGSFPSTSDEKLMLERAAGRAI 442

Query: 421 VDLLAREPAESVERRETAARWARRLHGGGFNAVSFSEDVNEDVRALLRRYKEGWTVTEDG 480
           VDLLAR PAE VERRETAARWARRLH GGF  VSFSEDVN+DVRALLR+YK+GWTV +DG
Sbjct: 443 VDLLARAPAECVERRETAARWARRLHEGGFKPVSFSEDVNDDVRALLRKYKDGWTVLDDG 499

Query: 481 DG--AGIFLAWKEQPVVWAAAWASGPPDGEKSRRSSSS 517
           +G  AGIFLAWK Q VVWAAAW   P DGEKSR+SS S
Sbjct: 503 EGADAGIFLAWKGQAVVWAAAWTPEPLDGEKSRQSSCS 499

[Close]

BLAST of Moc02g13020 vs. ExPASy TrEMBL
Match: A0A6J1G7P9 (protein SHORT-ROOT-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111451501 PE=3 SV=1)

HSP 1 Score: 621.7 bits (1602), Expect = 2.8e-174
Identity = 332/518 (64.09%), Postives = 388/518 (74.90%), Query Frame = 0


Query: 1   MDALFFRQQQLVSDVQSYSNSTRNDVVVNSSSSFENSATDRDRNQNPYFLDQPTQECFSS 60
           MD LF    +LVS++   S     D   NSS+S +NS    D   + + +  P ++CF+S
Sbjct: 1   MDTLF----RLVSNLHQPS-----DQSYNSSTSSKNSV---DLQNHCFLIPSPPEQCFTS 60

Query: 61  LSVTEDEDHDHFSAASSSNHYRHPPHPHTATVSTTSIGTATPTDQRFSHFIKDLNFKFSD 120
             +    D  HFSA+SSSNH     H H                    H   ++N +FS+
Sbjct: 61  SFMV---DQQHFSASSSSNHRPDNDHVHQ------------------DHEYINVNLEFSN 120

Query: 121 NWASELLLQTAIAITDNNTSRIQQFMWMLNELGSPYGDTNQKLAFYFLQAMFSRVIDSGD 180
            WAS L++QTAIAI DNN SRIQQ MWMLNELGSPYGD +QKLAFYFL+AMFS V +SG+
Sbjct: 121 GWASTLIVQTAIAIVDNNASRIQQLMWMLNELGSPYGDIDQKLAFYFLRAMFSHVTNSGE 180

Query: 181 RCYRSLVAVSEKRSCFELTRRIELKFQEMSPWMTFGHVASNGAIMEAFEGERKLHIIDIS 240
           RCYR+L  VSEKRSCF   RR+ LKFQE+SPWMTFGHVASNG IMEAFEGE+KLHIIDIS
Sbjct: 181 RCYRTLAMVSEKRSCFASMRRMVLKFQEVSPWMTFGHVASNGVIMEAFEGEKKLHIIDIS 240

Query: 241 NSFCTQWPTLLEALATRSNAEIPHLKLTMLITAKSNTTLESQKKIMKEISKRMEKFGRLM 300
           NSFCTQWPT LEALA+RS+ E PHL+LT L+ A+S+      KK+M+EIS+R+EKF RLM
Sbjct: 241 NSFCTQWPTFLEALASRSD-ETPHLRLTTLVAARSD------KKVMREISRRIEKFARLM 300

Query: 301 GVPFKFKPIFHSGDVSDINFAQLGVKTGEAVAVNCVGALRSVAPVGNRRDFLISLFRGLR 360
           GVPFKFK I++SGD+S +NF +LGV   EA+A+NCVGA RSV PV NRRDFLIS F  LR
Sbjct: 301 GVPFKFKAIYYSGDISQLNFTELGVNDDEALAINCVGAFRSVTPVENRRDFLISRFGALR 360

Query: 361 PRIITVVEEEADLAGGGVDLVKDVQECLRWFSVYFDSLAGSFPTASNEQLAIERAAGLAV 420
           PRIITVVEE+ADL   GVD VKDVQECLRWF VYFDSL GSFP+ S+E+L +ERAAG A+
Sbjct: 361 PRIITVVEEQADLDSDGVDFVKDVQECLRWFRVYFDSLDGSFPSTSDEKLMLERAAGRAI 420

Query: 421 VDLLAREPAESVERRETAARWARRLHGGGFNAVSFSEDVNEDVRALLRRYKEGWTVTEDG 480
           VDLLAR PAE VERRETAARWARRLH GGF  VSFSEDVN+DVRALLRRY++GWTV +DG
Sbjct: 421 VDLLARAPAECVERRETAARWARRLHEGGFKPVSFSEDVNDDVRALLRRYRDGWTVLDDG 478

Query: 481 D--GAGIFLAWKEQPVVWAAAWASGPPDGEKSRRSSSS 517
           +   AGIFLAWK Q VVWAAAW   P DGEKSR+SSSS
Sbjct: 481 EDADAGIFLAWKGQAVVWAAAWTPEPLDGEKSRQSSSS 478

[Close]

BLAST of Moc02g13020 vs. ExPASy TrEMBL
Match: A0A0A0LLY3 (GRAS domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G285340 PE=3 SV=1)

HSP 1 Score: 612.8 bits (1579), Expect = 1.3e-171
Identity = 329/509 (64.64%), Postives = 386/509 (75.83%), Query Frame = 0


Query: 13  SDVQSYSNSTRNDVVVNSSSSFENSATDRDRNQNPYFLDQP-TQECFSSLSVTEDEDHDH 72
           SD  SY+N        NSSSS +NS+   D+N   ++L  P +QECF++L +   ED DH
Sbjct: 15  SDQYSYNN--------NSSSSSKNSS---DQNHYNFYLQNPQSQECFNNLFM---EDEDH 74

Query: 73  FSAASSSNHYRHPP----HPHTATVSTTSIGTATPTDQRFSHFIKDLNFKFSDNWASELL 132
           FSA+SSS+H+ H         T T STTS G   P DQ       D NF  S+ WAS +L
Sbjct: 75  FSASSSSSHHHHHQLRQLQCSTTTTSTTSTGVVAPVDQ-------DPNFDLSEEWASTIL 134

Query: 133 LQTAIAITDNNTSRIQQFMWMLNELGSPYGDTNQKLAFYFLQAMFSRVIDSGDRCYRSLV 192
           LQTAIAI +NNT RIQ  MW+LNELGSPYGD +QKLAFYFLQ MFSRV DSG +CY +L 
Sbjct: 135 LQTAIAIVNNNTPRIQHLMWVLNELGSPYGDIDQKLAFYFLQGMFSRVTDSGAKCYGTLA 194

Query: 193 AVSEKRSCFELTRRIELKFQEMSPWMTFGHVASNGAIMEAFEGERKLHIIDIS---NSFC 252
           A  EK+SCFE  RR+ LKF+E+SPWM FG+VASNG++MEA +GE+KLHIIDI+   +SFC
Sbjct: 195 AALEKQSCFESMRRMVLKFEEVSPWMRFGYVASNGSLMEALQGEKKLHIIDIAGSYSSFC 254

Query: 253 TQWPTLLEALATRSNAEIPHLKLTMLITAKSNTTLESQKKIMKEISKRMEKFGRLMGVPF 312
           TQWPT +EALAT+S+ + PHL LT L+ AKS  TL + KK+MKEIS+R+EKF RLMG+PF
Sbjct: 255 TQWPTFIEALATQSD-QTPHLTLTTLVAAKSEGTLRAHKKLMKEISRRLEKFARLMGIPF 314

Query: 313 KFKPIFHSGDVSDINFAQLGVKTGEAVAVNCVGALRSVAPVGNRRDFLISLFRGLRPRII 372
           KFKPIFH GDVS  +F  L +K  EAVAVNC GALRSVAP+ NRRDFLISLFR LRP+II
Sbjct: 315 KFKPIFHYGDVSHFDFTNLPLKHDEAVAVNCSGALRSVAPLQNRRDFLISLFRSLRPKII 374

Query: 373 TVVEEEADL--AGGGVDLVKDVQECLRWFSVYFDSLAGSFPTASNEQLAIERAAGLAVVD 432
           TVVEEEADL   GG  D VK +QECLRWF +YFDSL GSFP  ++E+L +ERAAG AVVD
Sbjct: 375 TVVEEEADLNAHGGADDFVKHLQECLRWFRLYFDSLDGSFPVVTDERLMLERAAGRAVVD 434

Query: 433 LLAREPAESVERRETAARWARRLHGGGFNAVSFSEDVNEDVRALLRRYKEGWTVTE-DGD 492
           LLAR  AESVERRETAARW RR+H GGF  VSFSEDVN+DVRALLRRYK+GWTV + DG 
Sbjct: 435 LLARGLAESVERRETAARWVRRMHDGGFKPVSFSEDVNDDVRALLRRYKDGWTVMDGDGA 494

Query: 493 GAGIFLAWKEQPVVWAAAWASGPPDGEKS 511
           GAG+FLAWK QPVVWAAAW  G  DGEK+
Sbjct: 495 GAGMFLAWKGQPVVWAAAWVPGQVDGEKT 501

[Close]

BLAST of Moc02g13020 vs. TAIR 10
Match: AT4G37650.1 (GRAS family transcription factor )

HSP 1 Score: 464.9 bits (1195), Expect = 8.3e-131
Identity = 268/540 (49.63%), Postives = 345/540 (63.89%), Query Frame = 0


Query: 1   MDALFFRQQQLVSDVQSYSNSTRNDVVVNSSSSFENSATDRDRNQNPYFLDQP----TQE 60
           MD LF    +LVS  Q   +   + ++ N SS    S T     Q  Y  + P     +E
Sbjct: 1   MDTLF----RLVSLQQQQQS---DSIITNQSSLSRTSTTTTGSPQTAYHYNFPQNDVVEE 60

Query: 61  CFSSLSVTEDEDHDHFSAASSSNHYRH------------PPHPHTATVSTTSIGTATPT- 120
           CF+       ++ D  S++S  NH+ H            P   H AT ST S   A    
Sbjct: 61  CFNFFM----DEEDLSSSSSHHNHHNHNNPNTYYSPFTTPTQYHPATSSTPSSTAAAAAL 120

Query: 121 ------------DQRFSHFIKDLNFKFSDN--WASELLLQTAIAITDNNTSRIQQFMWML 180
                          FS      +F FS N  WA  +LL+ A A +D +T+R QQ +W L
Sbjct: 121 ASPYSSSGHHNDPSAFSIPQTPPSFDFSANAKWADSVLLEAARAFSDKDTARAQQILWTL 180

Query: 181 NELGSPYGDTNQKLAFYFLQAMFSRVIDSGDRCYRSLV--AVSEKRSCFELTRRIELKFQ 240
           NEL SPYGDT QKLA YFLQA+F+R+  SG+RCYR++V  A +EK   FE TR+  LKFQ
Sbjct: 181 NELSSPYGDTEQKLASYFLQALFNRMTGSGERCYRTMVTAAATEKTCSFESTRKTVLKFQ 240

Query: 241 EMSPWMTFGHVASNGAIMEAFEGERKLHIIDISNSFCTQWPTLLEALATRSNAEIPHLKL 300
           E+SPW TFGHVA+NGAI+EA +GE K+HI+DIS++FCTQWPTLLEALATRS+ + PHL+L
Sbjct: 241 EVSPWATFGHVAANGAILEAVDGEAKIHIVDISSTFCTQWPTLLEALATRSD-DTPHLRL 300

Query: 301 TMLITA-KSNTTLESQKKIMKEISKRMEKFGRLMGVPFKFKPIFHSGDVSDINFAQLGVK 360
           T ++ A K      +  ++MKEI  RMEKF RLMGVPFKF  I H GD+S+ +  +L VK
Sbjct: 301 TTVVVANKFVNDQTASHRMMKEIGNRMEKFARLMGVPFKFNIIHHVGDLSEFDLNELDVK 360

Query: 361 TGEAVAVNCVGALRSVAPVGNRRDFLISLFRGLRPRIITVVEEEADLAG---GGVD--LV 420
             E +A+NCVGA+  +A  G+ RD +IS FR LRPRI+TVVEEEADL G   GG D   +
Sbjct: 361 PDEVLAINCVGAMHGIASRGSPRDAVISSFRRLRPRIVTVVEEEADLVGEEEGGFDDEFL 420

Query: 421 KDVQECLRWFSVYFDSLAGSFPTASNEQLAIERAAGLAVVDLLAREPAESVERRETAARW 480
           +   ECLRWF V F+S   SFP  SNE+L +ERAAG A+VDL+A EP++S ERRETA +W
Sbjct: 421 RGFGECLRWFRVCFESWEESFPRTSNERLMLERAAGRAIVDLVACEPSDSTERRETARKW 480

Query: 481 ARRLHGGGFNAVSFSEDVNEDVRALLRRYKEG-WTVTEDGDGAGIFLAWKEQPVVWAAAW 501
           +RR+   GF AV +S++V +DVRALLRRYKEG W++ +  D AGIFL W++QPVVWA+AW
Sbjct: 481 SRRMRNSGFGAVGYSDEVADDVRALLRRYKEGVWSMVQCPDAAGIFLCWRDQPVVWASAW 528

[Close]

BLAST of Moc02g13020 vs. TAIR 10
Match: AT3G49950.1 (GRAS family transcription factor )

HSP 1 Score: 183.3 bits (464), Expect = 4.8e-46
Identity = 116/391 (29.67%), Postives = 191/391 (48.85%), Query Frame = 0


Query: 121 NWASELLLQTAIAITDNNTSRIQQFMWMLNELGSPYGDTNQKLAFYFLQAMFSRVIDSGD 180
           N+  +LLL  A AI  N+ +   Q +W+LN +  P GD+ Q+L   FL+A+ SR +    
Sbjct: 25  NFMEQLLLHCATAIDSNDAALTHQILWVLNNIAPPDGDSTQRLTSAFLRALLSRAVSKTP 84

Query: 181 RCYRSLVAVSEKRSCFELTRRIELKFQEMSPWMTFGHVASNGAIMEAFEGERKLHIIDIS 240
               ++  + +       +      F +++PW  FG +A+N AI+ A EG   +HI+D+S
Sbjct: 85  TLSSTISFLPQADELHRFSVVELAAFVDLTPWHRFGFIAANAAILTAVEGYSTVHIVDLS 144

Query: 241 NSFCTQWPTLLEALATRSNAEIPHLKLTMLITAKSNTTLESQKKIMKEISKRMEKFGRLM 300
            + C Q PTL++A+A+R N   P LKLT  + + S+          +E+  ++  F    
Sbjct: 145 LTHCMQIPTLIDAMASRLNKPPPLLKLT--VVSSSDHFPPFINISYEELGSKLVNFATTR 204

Query: 301 GVPFKFK--PIFHSGDVSDINFAQLGV---KTGEAVAVNCVGALRSV------APVGNRR 360
            +  +F   P  +S   S +   QL +      EA+ VNC   LR +      +   + R
Sbjct: 205 NITMEFTIVPSTYSDGFSSL-LQQLRIYPSSFNEALVVNCHMMLRYIPEEPLTSSSSSLR 264

Query: 361 DFLISLFRGLRPRIITVVEEEADLAGGGVDLVKDVQECLRWFSVYFDSLAGSFPTASNEQ 420
              +   R L PRI+T++EE+ DL     +LV  ++    +F + FD+   +    S ++
Sbjct: 265 TVFLKQLRSLNPRIVTLIEEDVDLT--SENLVNRLKSAFNYFWIPFDT---TDTFMSEQR 324

Query: 421 LAIERAAGLAVVDLLAREPAESVERRETAARWARRLHGGGFNAVSFSEDVNEDVRALLRR 480
              E      + +++A+E AE VER ET  RW  R+    F  V   ED   DV+A+L  
Sbjct: 325 RWYEAEISWKIENVVAKEGAERVERTETKRRWIERMREAEFGGVRVKEDAVADVKAMLEE 384

Query: 481 YKEGWTVTEDGDGAGIFLAWKEQPVVWAAAW 501
           +  GW + ++ D   + L WK   VV+A  W
Sbjct: 385 HAVGWGMKKEDDDESLVLTWKGHSVVFATVW 407

[Close]

BLAST of Moc02g13020 vs. TAIR 10
Match: AT2G04890.1 (SCARECROW-like 21 )

HSP 1 Score: 166.0 bits (419), Expect = 8.0e-41
Identity = 109/380 (28.68%), Postives = 192/380 (50.53%), Query Frame = 0


Query: 126 LLLQTAIAITDNNTSRIQQFMWMLNELGSPYGDTNQKLAFYFLQAMFSRVIDSGDRCYRS 185
           +L+  A A+++NN    +  M  L  + S  G+  Q+L  Y L+ + +R+  SG   Y+S
Sbjct: 53  VLVACAKAVSENNLLMARWCMGELRGMVSISGEPIQRLGAYMLEGLVARLAASGSSIYKS 112

Query: 186 LVAVSEKRSCFELTRRIELKFQEMSPWMTFGHVASNGAIMEAFEGERKLHIIDISNSFCT 245
           L   S +   +E    + +   E+ P+  FG++++NGAI EA + E ++HIID      +
Sbjct: 113 L--QSREPESYEFLSYVYV-LHEVCPYFKFGYMSANGAIAEAMKDEERIHIIDFQIGQGS 172

Query: 246 QWPTLLEALATRSNAEIPHLKLTMLITAKSNTTLESQKKIMKEISKRMEKFGRLMGVPFK 305
           QW  L++A A R     P++++T +              ++  + KR+EK  +   VPF+
Sbjct: 173 QWIALIQAFAARPGG-APNIRITGV----------GDGSVLVTVKKRLEKLAKKFDVPFR 232

Query: 306 FKPIFHSGDVSDINFAQLGVKTGEAVAVNCVGALRSV----APVGNRRDFLISLFRGLRP 365
           F  +  S    ++    L V+ GEA+ VN    L  +      + N RD L+ + + L P
Sbjct: 233 FNAV--SRPSCEVEVENLDVRDGEALGVNFAYMLHHLPDESVSMENHRDRLLRMVKSLSP 292

Query: 366 RIITVVEEEADLAGGGVDLVKDVQECLRWFSVYFDSLAGSFPTASNEQLAIER-AAGLAV 425
           +++T+VE+E +        +    E L +++  F+S+    P    E++ IE+      V
Sbjct: 293 KVVTLVEQECNT--NTSPFLPRFLETLSYYTAMFESIDVMLPRNHKERINIEQHCMARDV 352

Query: 426 VDLLAREPAESVERRETAARWARRLHGGGFNAVSFSEDVNEDVRALLRRYKEGWTVTEDG 485
           V+++A E AE +ER E   +W  R    GF     S  ++  +RALLR Y  G+ + E+ 
Sbjct: 353 VNIIACEGAERIERHELLGKWKSRFSMAGFEPYPLSSIISATIRALLRDYSNGYAI-EER 412

Query: 486 DGAGIFLAWKEQPVVWAAAW 501
           DGA ++L W ++ +V + AW
Sbjct: 413 DGA-LYLGWMDRILVSSCAW 412

[Close]

BLAST of Moc02g13020 vs. TAIR 10
Match: AT5G48150.1 (GRAS family transcription factor )

HSP 1 Score: 166.0 bits (419), Expect = 8.0e-41
Identity = 108/379 (28.50%), Postives = 196/379 (51.72%), Query Frame = 0


Query: 127 LLQTAIAITDNNTSRIQQFMWMLNELGSPYGDTNQKLAFYFLQAMFSRVIDSGDRCYRSL 186
           L+  A A+++N+       M  L ++ S  G+  Q+L  Y L+ + +++  SG   Y++L
Sbjct: 123 LVSCAKAMSENDLMMAHSMMEKLRQMVSVSGEPIQRLGAYLLEGLVAQLASSGSSIYKAL 182

Query: 187 VAVSEKRSCFELTRRIELKFQEMSPWMTFGHVASNGAIMEAFEGERKLHIIDISNSFCTQ 246
               E  S  EL   + + + E+ P+  FG++++NGAI EA + E ++HIID      +Q
Sbjct: 183 NRCPEPAST-ELLSYMHILY-EVCPYFKFGYMSANGAIAEAMKEENRVHIIDFQIGQGSQ 242

Query: 247 WPTLLEALATRSNAEIPHLKLTMLITAKSNTTLESQKKIMKEISKRMEKFGRLMGVPFKF 306
           W TL++A A R     P +++T +      T+  ++   +  +  R+ K  +   VPF+F
Sbjct: 243 WVTLIQAFAARPGGP-PRIRITGI---DDMTSAYARGGGLSIVGNRLAKLAKQFNVPFEF 302

Query: 307 KPIFHSGDVSDINFAQLGVKTGEAVAVNCVGALRSV----APVGNRRDFLISLFRGLRPR 366
             +  S  VS++    LGV+ GEA+AVN    L  +        N RD L+ + + L P+
Sbjct: 303 NSV--SVSVSEVKPKNLGVRPGEALAVNFAFVLHHMPDESVSTENHRDRLLRMVKSLSPK 362

Query: 367 IITVVEEEADLAGGGVDLVKDVQECLRWFSVYFDSLAGSFPTASNEQLAIER-AAGLAVV 426
           ++T+VE+E++             E + +++  F+S+  + P    +++ +E+      VV
Sbjct: 363 VVTLVEQESNT--NTAAFFPRFMETMNYYAAMFESIDVTLPRDHKQRINVEQHCLARDVV 422

Query: 427 DLLAREPAESVERRETAARWARRLHGGGFNAVSFSEDVNEDVRALLRRYKEGWTVTEDGD 486
           +++A E A+ VER E   +W  R    GF     S  VN  +++LLR Y + + + E+ D
Sbjct: 423 NIIACEGADRVERHELLGKWRSRFGMAGFTPYPLSPLVNSTIKSLLRNYSDKYRL-EERD 482

Query: 487 GAGIFLAWKEQPVVWAAAW 501
           GA ++L W  + +V + AW
Sbjct: 483 GA-LYLGWMHRDLVASCAW 489

[Close]

BLAST of Moc02g13020 vs. TAIR 10
Match: AT5G48150.2 (GRAS family transcription factor )

HSP 1 Score: 166.0 bits (419), Expect = 8.0e-41
Identity = 108/379 (28.50%), Postives = 196/379 (51.72%), Query Frame = 0


Query: 127 LLQTAIAITDNNTSRIQQFMWMLNELGSPYGDTNQKLAFYFLQAMFSRVIDSGDRCYRSL 186
           L+  A A+++N+       M  L ++ S  G+  Q+L  Y L+ + +++  SG   Y++L
Sbjct: 123 LVSCAKAMSENDLMMAHSMMEKLRQMVSVSGEPIQRLGAYLLEGLVAQLASSGSSIYKAL 182

Query: 187 VAVSEKRSCFELTRRIELKFQEMSPWMTFGHVASNGAIMEAFEGERKLHIIDISNSFCTQ 246
               E  S  EL   + + + E+ P+  FG++++NGAI EA + E ++HIID      +Q
Sbjct: 183 NRCPEPAST-ELLSYMHILY-EVCPYFKFGYMSANGAIAEAMKEENRVHIIDFQIGQGSQ 242

Query: 247 WPTLLEALATRSNAEIPHLKLTMLITAKSNTTLESQKKIMKEISKRMEKFGRLMGVPFKF 306
           W TL++A A R     P +++T +      T+  ++   +  +  R+ K  +   VPF+F
Sbjct: 243 WVTLIQAFAARPGGP-PRIRITGI---DDMTSAYARGGGLSIVGNRLAKLAKQFNVPFEF 302

Query: 307 KPIFHSGDVSDINFAQLGVKTGEAVAVNCVGALRSV----APVGNRRDFLISLFRGLRPR 366
             +  S  VS++    LGV+ GEA+AVN    L  +        N RD L+ + + L P+
Sbjct: 303 NSV--SVSVSEVKPKNLGVRPGEALAVNFAFVLHHMPDESVSTENHRDRLLRMVKSLSPK 362

Query: 367 IITVVEEEADLAGGGVDLVKDVQECLRWFSVYFDSLAGSFPTASNEQLAIER-AAGLAVV 426
           ++T+VE+E++             E + +++  F+S+  + P    +++ +E+      VV
Sbjct: 363 VVTLVEQESNT--NTAAFFPRFMETMNYYAAMFESIDVTLPRDHKQRINVEQHCLARDVV 422

Query: 427 DLLAREPAESVERRETAARWARRLHGGGFNAVSFSEDVNEDVRALLRRYKEGWTVTEDGD 486
           +++A E A+ VER E   +W  R    GF     S  VN  +++LLR Y + + + E+ D
Sbjct: 423 NIIACEGADRVERHELLGKWRSRFGMAGFTPYPLSPLVNSTIKSLLRNYSDKYRL-EERD 482

Query: 487 GAGIFLAWKEQPVVWAAAW 501
           GA ++L W  + +V + AW
Sbjct: 483 GA-LYLGWMHRDLVASCAW 489

The following BLAST results are available for this feature:

BLAST of Moc02g13020 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022947719.1	2.7e-176	65.06	protein SHORT-ROOT-like isoform X1 [Cucurbita moschata]	[more]
XP_023006995.1	3.6e-176	65.06	protein SHORT-ROOT-like isoform X1 [Cucurbita maxima]	[more]
XP_038902075.1	6.1e-176	65.70	protein SHORT-ROOT-like [Benincasa hispida]	[more]
KAG7035198.1	7.9e-176	65.06	Protein SHORT-ROOT [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023533110.1	1.4e-175	64.93	protein SHORT-ROOT-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Moc02g13020 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZF7	1.2e-129	49.63	Protein SHORT-ROOT OS=Arabidopsis thaliana OX=3702 GN=SHR PE=1 SV=1	[more]
A2YN56	3.5e-118	46.08	Protein SHORT-ROOT 1 OS=Oryza sativa subsp. indica OX=39946 GN=SHR1 PE=3 SV=1	[more]
Q8H2X8	2.3e-117	45.70	Protein SHORT-ROOT 1 OS=Oryza sativa subsp. japonica OX=39947 GN=SHR1 PE=1 SV=2	[more]
Q75I13	3.4e-113	45.26	Protein SHORT-ROOT 2 OS=Oryza sativa subsp. japonica OX=39947 GN=SHR2 PE=1 SV=1	[more]
A2XIA8	7.6e-113	45.07	Protein SHORT-ROOT 2 OS=Oryza sativa subsp. indica OX=39946 GN=SHR2 PE=3 SV=1	[more]

BLAST of Moc02g13020 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G7N4	1.3e-176	65.06	protein SHORT-ROOT-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451501...	[more]
A0A6J1L1R5	1.7e-176	65.06	protein SHORT-ROOT-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499621 P...	[more]
A0A6J1KZB8	2.8e-174	64.09	protein SHORT-ROOT-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111499621 P...	[more]
A0A6J1G7P9	2.8e-174	64.09	protein SHORT-ROOT-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111451501...	[more]
A0A0A0LLY3	1.3e-171	64.64	GRAS domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G285340 PE=3 S...	[more]

BLAST of Moc02g13020 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G37650.1	8.3e-131	49.63	GRAS family transcription factor	[more]
AT3G49950.1	4.8e-46	29.67	GRAS family transcription factor	[more]
AT2G04890.1	8.0e-41	28.68	SCARECROW-like 21	[more]
AT5G48150.1	8.0e-41	28.50	GRAS family transcription factor	[more]
AT5G48150.2	8.0e-41	28.50	GRAS family transcription factor	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005202	Transcription factor GRAS	PFAM	PF03514	GRAS	coord: 125..500 e-value: 2.7E-97 score: 326.1
IPR005202	Transcription factor GRAS	PANTHER	PTHR31636	OSJNBA0084A10.13 PROTEIN-RELATED	coord: 2..501
IPR005202	Transcription factor GRAS	PROSITE	PS50985	GRAS	coord: 114..501 score: 62.36327
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 69..98
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..98
IPR030019	Protein short-root	PANTHER	PTHR31636:SF9	PROTEIN SHORT-ROOT	coord: 2..501

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc02g13020.1	Moc02g13020.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008356	asymmetric cell division
biological_process	GO:0055072	iron ion homeostasis
biological_process	GO:0048366	leaf development
biological_process	GO:0045930	negative regulation of mitotic cell cycle
biological_process	GO:0009956	radial pattern formation
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding