Moc02g10660 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc02g10660
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	protein RADIALIS-like 2
Location	chr2: 7566607 .. 7566888 (-)
RNA-Seq Expression	Moc02g10660
Synteny	Moc02g10660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGCCATGTCCTCTCGTGACTCTTCTGGCTCATGGACTCCAAACCAAAACAAGGCCTTCGAAAGGGCCTTGGCTGTCTTTGACAAGGACACCCCTGATCGCTGGCACAATGTCGCCAACGCCGTCGGCGGCAAGACCGCCGACGAAGTCAAGAGGCATTTCGACCTTCTCGTCGAAGATGTCAAGCACATCGAATCCGGCCGCATTCCCTTCCCTAATTACACCGCCACCACCACCGGATCCTCCAATGGCAACGTCAATGACGAGGAAAAAAGGTAG

mRNA sequence

ATGGCTGCCATGTCCTCTCGTGACTCTTCTGGCTCATGGACTCCAAACCAAAACAAGGCCTTCGAAAGGGCCTTGGCTGTCTTTGACAAGGACACCCCTGATCGCTGGCACAATGTCGCCAACGCCGTCGGCGGCAAGACCGCCGACGAAGTCAAGAGGCATTTCGACCTTCTCGTCGAAGATGTCAAGCACATCGAATCCGGCCGCATTCCCTTCCCTAATTACACCGCCACCACCACCGGATCCTCCAATGGCAACGTCAATGACGAGGAAAAAAGGTAG

Coding sequence (CDS)

ATGGCTGCCATGTCCTCTCGTGACTCTTCTGGCTCATGGACTCCAAACCAAAACAAGGCCTTCGAAAGGGCCTTGGCTGTCTTTGACAAGGACACCCCTGATCGCTGGCACAATGTCGCCAACGCCGTCGGCGGCAAGACCGCCGACGAAGTCAAGAGGCATTTCGACCTTCTCGTCGAAGATGTCAAGCACATCGAATCCGGCCGCATTCCCTTCCCTAATTACACCGCCACCACCACCGGATCCTCCAATGGCAACGTCAATGACGAGGAAAAAAGGTAG

Protein sequence

MAAMSSRDSSGSWTPNQNKAFERALAVFDKDTPDRWHNVANAVGGKTADEVKRHFDLLVEDVKHIESGRIPFPNYTATTTGSSNGNVNDEEKR

Homology

[Close]

BLAST of Moc02g10660 vs. NCBI nr
Match: XP_022146256.1 (protein RADIALIS-like 2 [Momordica charantia])

HSP 1 Score: 193.4 bits (490), Expect = 9.0e-46
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0


Query: 1  MAAMSSRDSSGSWTPNQNKAFERALAVFDKDTPDRWHNVANAVGGKTADEVKRHFDLLVE 60
          MAAMSSRDSSGSWTPNQNKAFERALAVFDKDTPDRWHNVANAVGGKTADEVKRHFDLLVE
Sbjct: 1  MAAMSSRDSSGSWTPNQNKAFERALAVFDKDTPDRWHNVANAVGGKTADEVKRHFDLLVE 60

Query: 61 DVKHIESGRIPFPNYTATTTGSSNGNVNDEEKR 94
          DVKHIESGRIPFPNYTATTTGSSNGNVNDEEKR
Sbjct: 61 DVKHIESGRIPFPNYTATTTGSSNGNVNDEEKR 93

[Close]

BLAST of Moc02g10660 vs. NCBI nr
Match: XP_038902123.1 (protein RADIALIS-like 2 [Benincasa hispida])

HSP 1 Score: 158.7 bits (400), Expect = 2.5e-35
Identity = 79/96 (82.29%), Postives = 87/96 (90.62%), Query Frame = 0


Query: 1  MAAMSSRDSSGSWTPNQNKAFERALAVFDKDTPDRWHNVANAV-GGKTADEVKRHFDLLV 60
          MA++SS   SGSWTPNQNKAFERALAVFDKDTPDRW NVANAV GGKTADEVKRHFDLLV
Sbjct: 1  MASISSSHDSGSWTPNQNKAFERALAVFDKDTPDRWLNVANAVGGGKTADEVKRHFDLLV 60

Query: 61 EDVKHIESGRIPFPNYTATTT--GSSNGNVNDEEKR 94
          EDVKHIESGR+PFPNYT+T+T   S NGN+ND+E+R
Sbjct: 61 EDVKHIESGRVPFPNYTSTSTPATSDNGNLNDQEQR 96

[Close]

BLAST of Moc02g10660 vs. NCBI nr
Match: KAA8536101.1 (hypothetical protein F0562_028579 [Nyssa sinensis])

HSP 1 Score: 147.9 bits (372), Expect = 4.3e-32
Identity = 71/93 (76.34%), Postives = 81/93 (87.10%), Query Frame = 0


Query: 1  MAAMSSRDSSGSWTPNQNKAFERALAVFDKDTPDRWHNVANAVGGKTADEVKRHFDLLVE 60
          MA+MSSR  SGSWT  QNKAFE+ALA++DKDTPDRWHNVA AVGGKT +EVKRH+++LVE
Sbjct: 1  MASMSSR-GSGSWTAKQNKAFEKALALYDKDTPDRWHNVAKAVGGKTVEEVKRHYEILVE 60

Query: 61 DVKHIESGRIPFPNYTATTTGSSNGNVNDEEKR 94
          D+KHIE G +PFPNY  TT GSS GNVNDEEKR
Sbjct: 61 DIKHIEEGLVPFPNY-GTTGGSSQGNVNDEEKR 91

[Close]

BLAST of Moc02g10660 vs. NCBI nr
Match: KAG6571113.1 (Transcription factor RADIALIS, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 146.0 bits (367), Expect = 1.6e-31
Identity = 73/96 (76.04%), Postives = 81/96 (84.38%), Query Frame = 0


Query: 1  MAAMSSRDSSGSWTPNQNKAFERALAVFDKDTPDRWHNVANAV-GGKTADEVKRHFDLLV 60
          MA+MSS   S SWTP QNKAFERALAVFDKDTPDRW NVA AV GGKT DEVK HFDLLV
Sbjct: 1  MASMSSSHHSSSWTPKQNKAFERALAVFDKDTPDRWLNVAKAVGGGKTPDEVKTHFDLLV 60

Query: 61 EDVKHIESGRIPFPNY--TATTTGSSNGNVNDEEKR 94
          EDVKHIESG +PFPNY  TA+ +G+SN N+ND+E+R
Sbjct: 61 EDVKHIESGHVPFPNYSSTASDSGTSNANINDQEQR 96

[Close]

BLAST of Moc02g10660 vs. NCBI nr
Match: KAG6571117.1 (Protein RADIALIS-like 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 146.0 bits (367), Expect = 1.6e-31
Identity = 73/96 (76.04%), Postives = 81/96 (84.38%), Query Frame = 0


Query: 1  MAAMSSRDSSGSWTPNQNKAFERALAVFDKDTPDRWHNVANAV-GGKTADEVKRHFDLLV 60
          MA+MSS   S SWTP QNKAFERALAVFDKDTPDRW NVA AV GGKT DEVK HFDLLV
Sbjct: 1  MASMSSSHHSSSWTPKQNKAFERALAVFDKDTPDRWLNVAKAVGGGKTPDEVKTHFDLLV 60

Query: 61 EDVKHIESGRIPFPNY--TATTTGSSNGNVNDEEKR 94
          EDVKHIESG +PFPNY  TA+ +G+SN N+ND+E+R
Sbjct: 61 EDVKHIESGHVPFPNYSSTASDSGTSNANINDQEQR 96

[Close]

BLAST of Moc02g10660 vs. ExPASy Swiss-Prot
Match: Q9SIJ5 (Protein RADIALIS-like 2 OS=Arabidopsis thaliana OX=3702 GN=RL2 PE=2 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 8.0e-29
Identity = 57/84 (67.86%), Postives = 68/84 (80.95%), Query Frame = 0


Query: 10 SGSWTPNQNKAFERALAVFDKDTPDRWHNVANAVGGKTADEVKRHFDLLVEDVKHIESGR 69
          SGSWT  QNKAFERALAV+D+DTPDRWHNVA AVGGKT +E KR +DLLV D++ IE+G 
Sbjct: 11 SGSWTVKQNKAFERALAVYDQDTPDRWHNVARAVGGKTPEEAKRQYDLLVRDIESIENGH 70

Query: 70 IPFPNYTATTTGSSNGNVNDEEKR 94
          +PFP+Y  TT  S+ G + DEEKR
Sbjct: 71 VPFPDYKTTTGNSNRGRLRDEEKR 94

[Close]

BLAST of Moc02g10660 vs. ExPASy Swiss-Prot
Match: F4JVB8 (Protein RADIALIS-like 1 OS=Arabidopsis thaliana OX=3702 GN=RL1 PE=2 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 7.4e-27
Identity = 58/94 (61.70%), Postives = 74/94 (78.72%), Query Frame = 0


Query: 1  MAAMS-SRDSSGSWTPNQNKAFERALAVFDKDTPDRWHNVANAVGGKTADEVKRHFDLLV 60
          MA+ S S  SSGSWT  QNKAFE+ALA +D+DTP+RW NVA  VGGKT +EVKRH++LLV
Sbjct: 1  MASSSMSSQSSGSWTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLV 60

Query: 61 EDVKHIESGRIPFPNYTATTTGSSNGNVNDEEKR 94
          +D+  IE+G +PFPNY  T+ G +NG ++ EEKR
Sbjct: 61 QDINSIENGHVPFPNY-RTSGGCTNGRLSQEEKR 93

[Close]

BLAST of Moc02g10660 vs. ExPASy Swiss-Prot
Match: Q1A173 (Protein RADIALIS-like 6 OS=Arabidopsis thaliana OX=3702 GN=RL6 PE=2 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 3.7e-26
Identity = 57/91 (62.64%), Postives = 72/91 (79.12%), Query Frame = 0


Query: 3  AMSSRDSSGSWTPNQNKAFERALAVFDKDTPDRWHNVANAVGGKTADEVKRHFDLLVEDV 62
          A +SR S   WT +QNK FERALAV+DKDTPDRWHNVA AVGGKT +EVKRH+D+LVED+
Sbjct: 2  ASNSRSSISPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVEDL 61

Query: 63 KHIESGRIPFPNYTATTTGSSNGNVNDEEKR 94
           +IE+GR+P PNY   T  S++ ++ND + R
Sbjct: 62 INIETGRVPLPNY--KTFESNSRSINDFDTR 90

[Close]

BLAST of Moc02g10660 vs. ExPASy Swiss-Prot
Match: Q58FS3 (Transcription factor RADIALIS OS=Antirrhinum majus OX=4151 GN=RAD PE=1 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 3.1e-25
Identity = 53/89 (59.55%), Postives = 69/89 (77.53%), Query Frame = 0


Query: 5  SSRDSSGSWTPNQNKAFERALAVFDKDTPDRWHNVANAVGGKTADEVKRHFDLLVEDVKH 64
          S+R S   W+  +NKAFERALAV+DKDTPDRW NVA AV G+T +EVK+H+++LVED+K+
Sbjct: 3  STRGSGRPWSAKENKAFERALAVYDKDTPDRWANVARAVEGRTPEEVKKHYEILVEDIKY 62

Query: 65 IESGRIPFPNYTATTTGSSNGNVNDEEKR 94
          IESG++PFPNY  T      GN+  +EKR
Sbjct: 63 IESGKVPFPNYRTT-----GGNMKTDEKR 86

[Close]

BLAST of Moc02g10660 vs. ExPASy Swiss-Prot
Match: Q8GW75 (Protein RADIALIS-like 5 OS=Arabidopsis thaliana OX=3702 GN=RL5 PE=3 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 1.6e-24
Identity = 53/91 (58.24%), Postives = 65/91 (71.43%), Query Frame = 0


Query: 3  AMSSRDSSGSWTPNQNKAFERALAVFDKDTPDRWHNVANAVGGKTADEVKRHFDLLVEDV 62
          A SS  SS SWT  QNK FERALAV+DKDTPDRW NVA AVG K+A+EVKRH+D+LVED+
Sbjct: 2  ASSSMSSSSSWTSKQNKMFERALAVYDKDTPDRWQNVAKAVGSKSAEEVKRHYDILVEDL 61

Query: 63 KHIESGRIPFPNYTATTTGSSNGNVNDEEKR 94
           +IE   +P P Y     GS +  ++D + R
Sbjct: 62 MNIEQDLVPLPKYKTVDVGSKSRGIDDFDLR 92

[Close]

BLAST of Moc02g10660 vs. ExPASy TrEMBL
Match: A0A6J1CYR5 (protein RADIALIS-like 2 OS=Momordica charantia OX=3673 GN=LOC111015511 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 4.4e-46
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0


Query: 1  MAAMSSRDSSGSWTPNQNKAFERALAVFDKDTPDRWHNVANAVGGKTADEVKRHFDLLVE 60
          MAAMSSRDSSGSWTPNQNKAFERALAVFDKDTPDRWHNVANAVGGKTADEVKRHFDLLVE
Sbjct: 1  MAAMSSRDSSGSWTPNQNKAFERALAVFDKDTPDRWHNVANAVGGKTADEVKRHFDLLVE 60

Query: 61 DVKHIESGRIPFPNYTATTTGSSNGNVNDEEKR 94
          DVKHIESGRIPFPNYTATTTGSSNGNVNDEEKR
Sbjct: 61 DVKHIESGRIPFPNYTATTTGSSNGNVNDEEKR 93

[Close]

BLAST of Moc02g10660 vs. ExPASy TrEMBL
Match: A0A5J5B4N4 (SANT domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_028579 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 2.1e-32
Identity = 71/93 (76.34%), Postives = 81/93 (87.10%), Query Frame = 0


Query: 1  MAAMSSRDSSGSWTPNQNKAFERALAVFDKDTPDRWHNVANAVGGKTADEVKRHFDLLVE 60
          MA+MSSR  SGSWT  QNKAFE+ALA++DKDTPDRWHNVA AVGGKT +EVKRH+++LVE
Sbjct: 1  MASMSSR-GSGSWTAKQNKAFEKALALYDKDTPDRWHNVAKAVGGKTVEEVKRHYEILVE 60

Query: 61 DVKHIESGRIPFPNYTATTTGSSNGNVNDEEKR 94
          D+KHIE G +PFPNY  TT GSS GNVNDEEKR
Sbjct: 61 DIKHIEEGLVPFPNY-GTTGGSSQGNVNDEEKR 91

[Close]

BLAST of Moc02g10660 vs. ExPASy TrEMBL
Match: A0A5B6ZFE1 (SANT domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_012136 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 3.6e-32
Identity = 70/93 (75.27%), Postives = 79/93 (84.95%), Query Frame = 0


Query: 1  MAAMSSRDSSGSWTPNQNKAFERALAVFDKDTPDRWHNVANAVGGKTADEVKRHFDLLVE 60
          MA+MSSR  SGSWT  QNKAFE+ALAV DKDTPDRWHNVA AVGGKTA+EVKRH+++LVE
Sbjct: 1  MASMSSR-GSGSWTAKQNKAFEKALAVHDKDTPDRWHNVAKAVGGKTAEEVKRHYEILVE 60

Query: 61 DVKHIESGRIPFPNYTATTTGSSNGNVNDEEKR 94
          DVKHIE G++PFPNY  T   S  GN+NDEEKR
Sbjct: 61 DVKHIEEGQVPFPNYRTTGGSSQQGNMNDEEKR 92

[Close]

BLAST of Moc02g10660 vs. ExPASy TrEMBL
Match: A0A2P5EKH9 (Octamer-binding transcription factor OS=Trema orientale OX=63057 GN=TorRG33x02_182340 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 1.0e-31
Identity = 69/92 (75.00%), Postives = 81/92 (88.04%), Query Frame = 0


Query: 2  AAMSSRDSSGSWTPNQNKAFERALAVFDKDTPDRWHNVANAVGGKTADEVKRHFDLLVED 61
          ++MSSR SS SWT  QNKAFE+ALAV+DKDTPDRW+NVA AVGGKT +EVKRH++LLVED
Sbjct: 4  SSMSSRGSSASWTAKQNKAFEKALAVYDKDTPDRWYNVAKAVGGKTPEEVKRHYELLVED 63

Query: 62 VKHIESGRIPFPNYTATTTGSSNGNVNDEEKR 94
          VKHIESG++PFPNY  TT GSS GN +D+EKR
Sbjct: 64 VKHIESGQVPFPNY-RTTGGSSQGNTSDDEKR 94

[Close]

BLAST of Moc02g10660 vs. ExPASy TrEMBL
Match: A0A6J1FXX9 (protein RADIALIS-like 2 OS=Cucurbita moschata OX=3662 GN=LOC111448798 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.4e-31
Identity = 72/96 (75.00%), Postives = 81/96 (84.38%), Query Frame = 0


Query: 1  MAAMSSRDSSGSWTPNQNKAFERALAVFDKDTPDRWHNVANAV-GGKTADEVKRHFDLLV 60
          MA+M+S   S SWTP QNKAFERALAVFDKDTPDRW NVA AV GGKT DEVK HFDLLV
Sbjct: 1  MASMASSHRSSSWTPKQNKAFERALAVFDKDTPDRWLNVAKAVGGGKTPDEVKTHFDLLV 60

Query: 61 EDVKHIESGRIPFPNY--TATTTGSSNGNVNDEEKR 94
          EDVKHIESG +PFPNY  TA+ +G+SN N+ND+E+R
Sbjct: 61 EDVKHIESGHVPFPNYSSTASASGTSNANINDQEQR 96

[Close]

BLAST of Moc02g10660 vs. TAIR 10
Match: AT2G21650.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 127.5 bits (319), Expect = 5.6e-30
Identity = 57/84 (67.86%), Postives = 68/84 (80.95%), Query Frame = 0


Query: 10 SGSWTPNQNKAFERALAVFDKDTPDRWHNVANAVGGKTADEVKRHFDLLVEDVKHIESGR 69
          SGSWT  QNKAFERALAV+D+DTPDRWHNVA AVGGKT +E KR +DLLV D++ IE+G 
Sbjct: 11 SGSWTVKQNKAFERALAVYDQDTPDRWHNVARAVGGKTPEEAKRQYDLLVRDIESIENGH 70

Query: 70 IPFPNYTATTTGSSNGNVNDEEKR 94
          +PFP+Y  TT  S+ G + DEEKR
Sbjct: 71 VPFPDYKTTTGNSNRGRLRDEEKR 94

[Close]

BLAST of Moc02g10660 vs. TAIR 10
Match: AT4G39250.1 (RAD-like 1 )

HSP 1 Score: 120.9 bits (302), Expect = 5.3e-28
Identity = 58/94 (61.70%), Postives = 74/94 (78.72%), Query Frame = 0


Query: 1  MAAMS-SRDSSGSWTPNQNKAFERALAVFDKDTPDRWHNVANAVGGKTADEVKRHFDLLV 60
          MA+ S S  SSGSWT  QNKAFE+ALA +D+DTP+RW NVA  VGGKT +EVKRH++LLV
Sbjct: 1  MASSSMSSQSSGSWTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLV 60

Query: 61 EDVKHIESGRIPFPNYTATTTGSSNGNVNDEEKR 94
          +D+  IE+G +PFPNY  T+ G +NG ++ EEKR
Sbjct: 61 QDINSIENGHVPFPNY-RTSGGCTNGRLSQEEKR 93

[Close]

BLAST of Moc02g10660 vs. TAIR 10
Match: AT1G75250.1 (RAD-like 6 )

HSP 1 Score: 118.6 bits (296), Expect = 2.6e-27
Identity = 57/91 (62.64%), Postives = 72/91 (79.12%), Query Frame = 0


Query: 3  AMSSRDSSGSWTPNQNKAFERALAVFDKDTPDRWHNVANAVGGKTADEVKRHFDLLVEDV 62
          A +SR S   WT +QNK FERALAV+DKDTPDRWHNVA AVGGKT +EVKRH+D+LVED+
Sbjct: 2  ASNSRSSISPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVEDL 61

Query: 63 KHIESGRIPFPNYTATTTGSSNGNVNDEEKR 94
           +IE+GR+P PNY   T  S++ ++ND + R
Sbjct: 62 INIETGRVPLPNY--KTFESNSRSINDFDTR 90

[Close]

BLAST of Moc02g10660 vs. TAIR 10
Match: AT1G75250.2 (RAD-like 6 )

HSP 1 Score: 118.6 bits (296), Expect = 2.6e-27
Identity = 57/91 (62.64%), Postives = 72/91 (79.12%), Query Frame = 0


Query: 3  AMSSRDSSGSWTPNQNKAFERALAVFDKDTPDRWHNVANAVGGKTADEVKRHFDLLVEDV 62
          A +SR S   WT +QNK FERALAV+DKDTPDRWHNVA AVGGKT +EVKRH+D+LVED+
Sbjct: 2  ASNSRSSISPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVEDL 61

Query: 63 KHIESGRIPFPNYTATTTGSSNGNVNDEEKR 94
           +IE+GR+P PNY   T  S++ ++ND + R
Sbjct: 62 INIETGRVPLPNY--KTFESNSRSINDFDTR 90

[Close]

BLAST of Moc02g10660 vs. TAIR 10
Match: AT1G19510.1 (RAD-like 5 )

HSP 1 Score: 113.2 bits (282), Expect = 1.1e-25
Identity = 53/91 (58.24%), Postives = 65/91 (71.43%), Query Frame = 0


Query: 3  AMSSRDSSGSWTPNQNKAFERALAVFDKDTPDRWHNVANAVGGKTADEVKRHFDLLVEDV 62
          A SS  SS SWT  QNK FERALAV+DKDTPDRW NVA AVG K+A+EVKRH+D+LVED+
Sbjct: 2  ASSSMSSSSSWTSKQNKMFERALAVYDKDTPDRWQNVAKAVGSKSAEEVKRHYDILVEDL 61

Query: 63 KHIESGRIPFPNYTATTTGSSNGNVNDEEKR 94
           +IE   +P P Y     GS +  ++D + R
Sbjct: 62 MNIEQDLVPLPKYKTVDVGSKSRGIDDFDLR 92

The following BLAST results are available for this feature:

BLAST of Moc02g10660 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022146256.1	9.0e-46	100.00	protein RADIALIS-like 2 [Momordica charantia]	[more]
XP_038902123.1	2.5e-35	82.29	protein RADIALIS-like 2 [Benincasa hispida]	[more]
KAA8536101.1	4.3e-32	76.34	hypothetical protein F0562_028579 [Nyssa sinensis]	[more]
KAG6571113.1	1.6e-31	76.04	Transcription factor RADIALIS, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG6571117.1	1.6e-31	76.04	Protein RADIALIS-like 2, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Moc02g10660 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SIJ5	8.0e-29	67.86	Protein RADIALIS-like 2 OS=Arabidopsis thaliana OX=3702 GN=RL2 PE=2 SV=1	[more]
F4JVB8	7.4e-27	61.70	Protein RADIALIS-like 1 OS=Arabidopsis thaliana OX=3702 GN=RL1 PE=2 SV=1	[more]
Q1A173	3.7e-26	62.64	Protein RADIALIS-like 6 OS=Arabidopsis thaliana OX=3702 GN=RL6 PE=2 SV=1	[more]
Q58FS3	3.1e-25	59.55	Transcription factor RADIALIS OS=Antirrhinum majus OX=4151 GN=RAD PE=1 SV=1	[more]
Q8GW75	1.6e-24	58.24	Protein RADIALIS-like 5 OS=Arabidopsis thaliana OX=3702 GN=RL5 PE=3 SV=1	[more]

BLAST of Moc02g10660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CYR5	4.4e-46	100.00	protein RADIALIS-like 2 OS=Momordica charantia OX=3673 GN=LOC111015511 PE=4 SV=1	[more]
A0A5J5B4N4	2.1e-32	76.34	SANT domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_028579 PE=4 ...	[more]
A0A5B6ZFE1	3.6e-32	75.27	SANT domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_012136 PE=...	[more]
A0A2P5EKH9	1.0e-31	75.00	Octamer-binding transcription factor OS=Trema orientale OX=63057 GN=TorRG33x02_1...	[more]
A0A6J1FXX9	1.4e-31	75.00	protein RADIALIS-like 2 OS=Cucurbita moschata OX=3662 GN=LOC111448798 PE=4 SV=1	[more]

BLAST of Moc02g10660 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G21650.1	5.6e-30	67.86	Homeodomain-like superfamily protein	[more]
AT4G39250.1	5.3e-28	61.70	RAD-like 1	[more]
AT1G75250.1	2.6e-27	62.64	RAD-like 6	[more]
AT1G75250.2	2.6e-27	62.64	RAD-like 6	[more]
AT1G19510.1	1.1e-25	58.24	RAD-like 5	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 9..61 e-value: 1.4E-5 score: 34.6
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 5..59 score: 6.132755
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 12..55 e-value: 1.87601E-5 score: 36.7846
None	No IPR available	GENE3D	1.10.10.60		coord: 3..72 e-value: 1.5E-24 score: 87.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..93
None	No IPR available	PANTHER	PTHR43952:SF40	OS05G0579600 PROTEIN	coord: 1..85
IPR044636	Transcription factor RADIALIS-like	PANTHER	PTHR43952	MYB FAMILY TRANSCRIPTION FACTOR-RELATED	coord: 1..85
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 11..67

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc02g10660.1	Moc02g10660.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity