Moc02g08410 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc02g08410
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptioncircumsporozoite protein-like
Locationchr2: 5969415 .. 5969738 (+)
RNA-Seq ExpressionMoc02g08410
SyntenyMoc02g08410
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTCCACAAAGATCTGTTTCTGTATTCCTCGCCATAAAAATGGCCACAAAGCTAATGGCGGATCAGAGAAATCTTCCAAATCAAAGCCTTCCCGCCGCAAATCTCGTCGAGGTGAAAAAGGAGGTAAGCATTCCTCTAGTAGTGATAGTAGTGGAGATGGCAACACAAACACAGGTGCTGCTGCAGGTGGAGGCAGTGATGCCGCCGTGGCTGCTGTCGTTGTGATGGGTACGACAGCGGCAACCATGGATGCCGTTGAGGATGACGGTGGCAGTGCCCATGGCCACGGCGGTGGTGGTGAGGGAGGTGGCGGAGATTGA

mRNA sequence

ATGGAGTCCACAAAGATCTGTTTCTGTATTCCTCGCCATAAAAATGGCCACAAAGCTAATGGCGGATCAGAGAAATCTTCCAAATCAAAGCCTTCCCGCCGCAAATCTCGTCGAGGTGAAAAAGGAGGTAAGCATTCCTCTAGTAGTGATAGTAGTGGAGATGGCAACACAAACACAGGTGCTGCTGCAGGTGGAGGCAGTGATGCCGCCGTGGCTGCTGTCGTTGTGATGGGTACGACAGCGGCAACCATGGATGCCGTTGAGGATGACGGTGGCAGTGCCCATGGCCACGGCGGTGGTGGTGAGGGAGGTGGCGGAGATTGA

Coding sequence (CDS)

ATGGAGTCCACAAAGATCTGTTTCTGTATTCCTCGCCATAAAAATGGCCACAAAGCTAATGGCGGATCAGAGAAATCTTCCAAATCAAAGCCTTCCCGCCGCAAATCTCGTCGAGGTGAAAAAGGAGGTAAGCATTCCTCTAGTAGTGATAGTAGTGGAGATGGCAACACAAACACAGGTGCTGCTGCAGGTGGAGGCAGTGATGCCGCCGTGGCTGCTGTCGTTGTGATGGGTACGACAGCGGCAACCATGGATGCCGTTGAGGATGACGGTGGCAGTGCCCATGGCCACGGCGGTGGTGGTGAGGGAGGTGGCGGAGATTGA

Protein sequence

MESTKICFCIPRHKNGHKANGGSEKSSKSKPSRRKSRRGEKGGKHSSSSDSSGDGNTNTGAAAGGGSDAAVAAVVVMGTTAATMDAVEDDGGSAHGHGGGGEGGGGD
Homology
BLAST of Moc02g08410 vs. NCBI nr
Match: XP_022148326.1 (circumsporozoite protein-like [Momordica charantia])

HSP 1 Score: 188.3 bits (477), Expect = 3.3e-44
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0

Query: 1   MESTKICFCIPRHKNGHKANGGSEKSSKSKPSRRKSRRGEKGGKHSSSSDSSGDGNTNTG 60
           MESTKICFCIPRHKNGHKANGGSEKSSKSKPSRRKSRRGEKGGKHSSSSDSSGDGNTNTG
Sbjct: 1   MESTKICFCIPRHKNGHKANGGSEKSSKSKPSRRKSRRGEKGGKHSSSSDSSGDGNTNTG 60

Query: 61  AAAGGGSDAAVAAVVVMGTTAATMDAVEDDGGSAHGHGGGGEGGGGD 108
           AAAGGGSDAAVAAVVVMGTTAATMDAVEDDGGSAHGHGGGGEGGGGD
Sbjct: 61  AAAGGGSDAAVAAVVVMGTTAATMDAVEDDGGSAHGHGGGGEGGGGD 107

BLAST of Moc02g08410 vs. NCBI nr
Match: KAG6605437.1 (hypothetical protein SDJN03_02754, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 120.2 bits (300), Expect = 1.1e-23
Identity = 81/109 (74.31%), Postives = 87/109 (79.82%), Query Frame = 0

Query: 1   MESTKICFCIPRHKNGHKANGGSEKSSKSKPSRRKSRRGEKGGKHSSSSDSSGDGNTNTG 60
           MES+KICFCIPRHKNG KA+GGSEKSSKSKPSRRKSRR  KGGKHS SSDSSGDG  NTG
Sbjct: 460 MESSKICFCIPRHKNGLKADGGSEKSSKSKPSRRKSRRAAKGGKHSPSSDSSGDG--NTG 519

Query: 61  AAAGGGSDAAVAAV-VVMGTTAATMDAVEDDGGSAHGHGG-GGEGGGGD 108
            A    + AAVAAV V    T   +DA+EDDGGS+HGHGG GG GGGGD
Sbjct: 520 DANESSASAAVAAVAVAAAATVVAVDALEDDGGSSHGHGGEGGGGGGGD 566

BLAST of Moc02g08410 vs. NCBI nr
Match: KAG7035385.1 (hypothetical protein SDJN02_02181 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 120.2 bits (300), Expect = 1.1e-23
Identity = 81/109 (74.31%), Postives = 87/109 (79.82%), Query Frame = 0

Query: 1   MESTKICFCIPRHKNGHKANGGSEKSSKSKPSRRKSRRGEKGGKHSSSSDSSGDGNTNTG 60
           MES+KICFCIPRHKNG KA+GGSEKSSKSKPSRRKSRR  KGGKHS SSDSSGDG  NTG
Sbjct: 478 MESSKICFCIPRHKNGLKADGGSEKSSKSKPSRRKSRRAAKGGKHSPSSDSSGDG--NTG 537

Query: 61  AAAGGGSDAAVAAV-VVMGTTAATMDAVEDDGGSAHGHGG-GGEGGGGD 108
            A    + AAVAAV V    T   +DA+EDDGGS+HGHGG GG GGGGD
Sbjct: 538 DANESSASAAVAAVAVAAAATVVAVDALEDDGGSSHGHGGEGGGGGGGD 584

BLAST of Moc02g08410 vs. NCBI nr
Match: KAG6570682.1 (hypothetical protein SDJN03_29597, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 115.9 bits (289), Expect = 2.1e-22
Identity = 83/109 (76.15%), Postives = 88/109 (80.73%), Query Frame = 0

Query: 1   MESTKICFCIPRHKNGHKANGGSEKSSKSKPSRRKSRRGEKGGKHSSSSDSSGDGNTNTG 60
           MES+KICFCIPRHKN HK +GGSEKSSKSKPSRRKS  G K GKHSSSSDSSG+G  NTG
Sbjct: 125 MESSKICFCIPRHKNSHKVDGGSEKSSKSKPSRRKS--GAKEGKHSSSSDSSGNG--NTG 184

Query: 61  AAAGGGSDAAVAAVVVMGTTAATMDAV-EDDGGSAHGHGG-GGEGGGGD 108
           AA+  GS AAVAA+ V   TA TMDAV EDDGGS H HGG GG GGGGD
Sbjct: 185 AASAAGSAAAVAAIAV---TAVTMDAVDEDDGGSTHVHGGEGGGGGGGD 226

BLAST of Moc02g08410 vs. NCBI nr
Match: TYK15390.1 (tropomyosin [Cucumis melo var. makuwa])

HSP 1 Score: 115.2 bits (287), Expect = 3.6e-22
Identity = 77/105 (73.33%), Postives = 83/105 (79.05%), Query Frame = 0

Query: 3   STKICFCIPRHKNGHKANGGSEKSSKSKPSRRKSRRGEKGGKHSSSSDSSGDGNTNTGAA 62
           S+KICFCIPRHKNGHKA+GGSEKSSKSKPSRRKSRRG K GKHSS SDSSG+GN+     
Sbjct: 433 SSKICFCIPRHKNGHKADGGSEKSSKSKPSRRKSRRGSKEGKHSSGSDSSGNGNSGD--- 492

Query: 63  AGGGSDAAVAAVVVMGTTAATMDAVEDDGGSAHGHGG-GGEGGGG 107
           AG  S  AVAAV V   TA TMDA++DDGGS H HGG GG GG G
Sbjct: 493 AGAASATAVAAVAV---TAVTMDALDDDGGSTHVHGGEGGSGGAG 531

BLAST of Moc02g08410 vs. ExPASy TrEMBL
Match: A0A6J1D515 (circumsporozoite protein-like OS=Momordica charantia OX=3673 GN=LOC111017006 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.6e-44
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0

Query: 1   MESTKICFCIPRHKNGHKANGGSEKSSKSKPSRRKSRRGEKGGKHSSSSDSSGDGNTNTG 60
           MESTKICFCIPRHKNGHKANGGSEKSSKSKPSRRKSRRGEKGGKHSSSSDSSGDGNTNTG
Sbjct: 1   MESTKICFCIPRHKNGHKANGGSEKSSKSKPSRRKSRRGEKGGKHSSSSDSSGDGNTNTG 60

Query: 61  AAAGGGSDAAVAAVVVMGTTAATMDAVEDDGGSAHGHGGGGEGGGGD 108
           AAAGGGSDAAVAAVVVMGTTAATMDAVEDDGGSAHGHGGGGEGGGGD
Sbjct: 61  AAAGGGSDAAVAAVVVMGTTAATMDAVEDDGGSAHGHGGGGEGGGGD 107

BLAST of Moc02g08410 vs. ExPASy TrEMBL
Match: A0A5D3CVK1 (Tropomyosin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold571G00300 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.7e-22
Identity = 77/105 (73.33%), Postives = 83/105 (79.05%), Query Frame = 0

Query: 3   STKICFCIPRHKNGHKANGGSEKSSKSKPSRRKSRRGEKGGKHSSSSDSSGDGNTNTGAA 62
           S+KICFCIPRHKNGHKA+GGSEKSSKSKPSRRKSRRG K GKHSS SDSSG+GN+     
Sbjct: 433 SSKICFCIPRHKNGHKADGGSEKSSKSKPSRRKSRRGSKEGKHSSGSDSSGNGNSGD--- 492

Query: 63  AGGGSDAAVAAVVVMGTTAATMDAVEDDGGSAHGHGG-GGEGGGG 107
           AG  S  AVAAV V   TA TMDA++DDGGS H HGG GG GG G
Sbjct: 493 AGAASATAVAAVAV---TAVTMDALDDDGGSTHVHGGEGGSGGAG 531

BLAST of Moc02g08410 vs. ExPASy TrEMBL
Match: A0A5A7V5U9 (Tropomyosin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G001080 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.7e-22
Identity = 77/105 (73.33%), Postives = 83/105 (79.05%), Query Frame = 0

Query: 3   STKICFCIPRHKNGHKANGGSEKSSKSKPSRRKSRRGEKGGKHSSSSDSSGDGNTNTGAA 62
           S+KICFCIPRHKNGHKA+GGSEKSSKSKPSRRKSRRG K GKHSS SDSSG+GN+     
Sbjct: 463 SSKICFCIPRHKNGHKADGGSEKSSKSKPSRRKSRRGSKEGKHSSGSDSSGNGNSGD--- 522

Query: 63  AGGGSDAAVAAVVVMGTTAATMDAVEDDGGSAHGHGG-GGEGGGG 107
           AG  S  AVAAV V   TA TMDA++DDGGS H HGG GG GG G
Sbjct: 523 AGAASATAVAAVAV---TAVTMDALDDDGGSTHVHGGEGGSGGAG 561

BLAST of Moc02g08410 vs. ExPASy TrEMBL
Match: A0A0A0KFD0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G188150 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 1.1e-21
Identity = 77/106 (72.64%), Postives = 82/106 (77.36%), Query Frame = 0

Query: 3   STKICFCIPRHKNGHKANGGSEKSSKSKPSRRKSRRGEKGGKHSSSSDSSGDGNTNTGAA 62
           S+KICFCIPRHKNGHKA+GGSEKSSKSKPSRRKS R  K GKHSSSSDSSG+GN     A
Sbjct: 4   SSKICFCIPRHKNGHKADGGSEKSSKSKPSRRKSHRDSKEGKHSSSSDSSGNGNAGEECA 63

Query: 63  AGGGSDAAVAAVVVMGTTAATMDAVEDDGGSAHGHGG-GGEGGGGD 108
           A   S  AVAAV V   TA TMDA++DDGGS H HGG GG G GGD
Sbjct: 64  A---SATAVAAVAV---TAVTMDALDDDGGSTHVHGGEGGSGAGGD 103

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022148326.13.3e-44100.00circumsporozoite protein-like [Momordica charantia][more]
KAG6605437.11.1e-2374.31hypothetical protein SDJN03_02754, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7035385.11.1e-2374.31hypothetical protein SDJN02_02181 [Cucurbita argyrosperma subsp. argyrosperma][more]
KAG6570682.12.1e-2276.15hypothetical protein SDJN03_29597, partial [Cucurbita argyrosperma subsp. sorori... [more]
TYK15390.13.6e-2273.33tropomyosin [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1D5151.6e-44100.00circumsporozoite protein-like OS=Momordica charantia OX=3673 GN=LOC111017006 PE=... [more]
A0A5D3CVK11.7e-2273.33Tropomyosin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold571G00300 PE... [more]
A0A5A7V5U91.7e-2273.33Tropomyosin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G001080 PE... [more]
A0A0A0KFD01.1e-2172.64Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G188150 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..107
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 48..63
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..66

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc02g08410.1Moc02g08410.1mRNA