Moc02g05110 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc02g05110
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	cellulose synthase-like protein H1
Location	chr2: 3739121 .. 3743585 (-)
RNA-Seq Expression	Moc02g05110
Synteny	Moc02g05110

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCTTCTGGCTCCAAGCAATGGCCTTCCTCTGTGAGTCCTGGTTTGCTTTCGTCTGGCTCCTCCTCCTCGCCACGCGATGGAACTTCTTCCACTATACAAAACCTACCCCCACCGCCTCCTCAAACGGTAAACATTTTATTTTACTTCTGCAACTTTTCATGCCATCAATTTTGTCAGTTGTCACTGTTTTGATCAAGTTATGGTTAAAATTAACTCGCACTCAACCAAAAGCTCCCCTTATTTGTGGAGTTGGAAAAGTAGGAATCATATTAAAAATGGAGGAAATACTTTCAAAACTAGTATTATTTTTTTTTTCAGTTTAAAACGAATTTTTATAAAATTTGTATAGGATTTTAGCCTACTGAACCAAAATAGATAAAAATCTATGTCCAGAGCTAGAATAAGATTTAAACCAGGCCTTATAACTTTTTTTTTAATATAATTTAGATTAAAAAATATTATTTTCATTGGTGCAGTTTCAAAAGATTTTATTTTTAATCTCATTTTCTATTATAATTTCAACACAATATTATCCTTAATATATATTTTTGAAATTTAATAATTTTTTTATTAAATGATTTTTGTTACCCGTAAAATTTATGTTAAAATTTTTATGAATAAAAATTGAGAGTATAATAATCCAAATTAATCCTTAACAACTAAAATGAACTACATCATTTTTACCTATAATTTGAAATCAAACTAGGTTGATCTCTTCACAGAATCATTTTGTTTCATGATCCTAAATTAATGCAGGGTGGAGAAGCTCCCTCCGGTGGACATATTCGTGACAACGGCGGATCCGGAGCTGGAGCCGCCGATAATCACCATAAACACGGTGCTGTCTTTGCTAGCAGTGGATTATCCGGCCGACAAATTGGCCTGTTATGTCTCCGACGACGGCGGTTCTCCGGTCACCGTTTTTTCCCTCTCCGAAGCTCTGAAGTTCGCGAAGATTTGGGTTCCATTTTGCAAAAAGTACAAGGTTCAAGTGAGAGCTCCGTTTAGATTCTTCTCCAATGGCGATTTAGGCTCCGGCGGGTCGCCGGAGTTCCGGAATGAGTGGAGAACAATGAAGTTAGAAAATTTTAATGGTTAAATATTGTTTAGAAAAATTATGAAAAATCAGAAGTTTATTTTGTGTCTTAATTTGTATGAGAAGGAGGAGTTACGAAAAGCTATGCCACACAATTGAGAAATCGGCCCTACGTGACTTCACCGGGGACCTGCCGGACTTTTCCAATATAAAATCAAATAATCATCCTCCAATTATCGAGGTACCTTTTTATAAATTGTGAGTTCTCATATATGTTAGTAGAAAAAAAAAAAAAGTTACCATGTAATATATTTTGGTAATTAAATAGAGAGAGAATGAATAAATTAATATGAAATATGTACTAATTAATAAAAATATATATATAATGATTGCAGTTGATATGGGAGAACAAGGAGGCGCATTTTGATGGATTGCCTCATCTAATTTATGTATCTAGAGGAAAAAGACCGAAAAATCCACATCATTACAAGGCCGGGACCATGAACGTTTTGGTAATTTAACTTTCACTTTCTTCTTAATCATTATTTATTTTCAACCGTGTGTTATAATTTTGATTCTCTATATTTTCAATAAAAATATTTGTCGCTTTGCTGCTGGGACATGTCATATATGACACGATTATATTGTAACATATAGGGGAAGAAAAAGTATTGTGGCCCACTAATAATACATAATGTGGGGATGCTTCACAGCCAGCATAGGATAAACAATTCCTTTGTTTTAAACGTCGATCGAAATGTCTGAACTCTCAATTTTATGGAAATATCAATGAAAATATCGATAAAATAACACTGGTGTCGATGAAAATTTTTATAAAAGTTAGAAAAATTTAAAAATCGTAAAAAATATTTAAATTAACAAATAAACATTTTTCTATTTCTAAATTAGTTTAAAATAATTAATATTAGGTATATATTAGTGACATTTTGTTGATATTTTTCATATTTTGTCGATTTTCTTGTACTATAATGATGGAAATGTCGATTTATCTTTCATGTCAATATCGAATCTAGGAAAACATGAATATGTCGATGGAAAGGTCGACGTGTCGACGAATATTTAAAAACATGCTTCTACTTAGAATTTAAAATACTATGAAGTGATATATTGTATTATTTCGTCTAGTCTACATTCTTATTGGATGTGGTTGATAATATGACATATGGGAGTAGAATAGAAAATTTCTGATACATATTGGTACTAGAAATTTTCCTTGCAAGATTACATTATTGTCAAATTTTTCTTTTCTAATCTCTAATCTTTTATACCTATCAATCCAATGTTTTTTTTTCTTTATACGTATAATTAATATGCAAGACAATATGTTAATTAGAATCTTATGTATCTTGTGTATTTGACGTGCAGACTAGAGTGTCTGGATTGATGACAAACGTCCCTTATATATTAAATGTAGATTGTGATATGTTTCTGAATAATCCTAATATTCTCCTACATGTGTCTCCTTCAAGACCCGTCCATTGATAAAGAAGATGCATTTGTTCAATTTCCTCAAAGCTTTTACAATGGACTCAAAAGACCCTTATGGAAACCAATTTCATGTCCTGATGGAGGTAATTTTATTCACATTTATGTTATCTGTTTGAAAAAAAAAAGATCAATCGATCATTAAATTCTGCAAAACAGCTGGACCTATTTGATTTTTAATAAAATAAATAAGACATAGAGATAGAAAAACACCGATGATTTATGCTGATACAGCTTAGTTTTGGGACTATATCACAAAAGTAGTTTCTTTTCCACTATATTTTGGAAGATTACAATGAAAAGTTTTCTTTCTCACATATGCTATCTTGTTTCGAAGTGTCCAACTATAATTACTTAAAAATTACACAATTAAAAATACTCTCACTGAATATACGAAACATCATACTTCTTTTATTTGAACATGCGGTCTACAACTACTCTATTCTCTTTTAAATTCCATACACCTCTACTTTACATGTTTTTAAAAACAATGTTTTATTAATTAAATGATGATATTTAATCACCACTCTTATCTTTTCTTTTCTTTTTTGGTAGTTTGTTGTTGGTGGAACAAATGGGCTTCAAGGGCCATGCTACATGGGAACGGATGTATTCATAGACGAAAAGTATTGTATGGTCAATCTCCGGATGGTACAAATATTTTTGGTAATTAACTTCATTTTATATTGCTTTTAGTAAAAAATAAATAAAATTTTTAACTATTTAAGTTCAATAATAATTTAATATATTATACACAAAGGAACATATTTAATAGTCGAACTTAGCTCAACTATATTTCAGGAAATTCATACTCTACTTGATGGTGTTGTATTTACAAATATATATGTATATATTTATTAATAGTTCACCTGCTTGAAACTTGTAAATATATGAAAAATATTTACCTCCACTAGTGAGGATCAAATCTTGTCATTACCATGGTTGAAAAATTAACAACTTGTTTTTTTAGAACAAAGTCTTTATTCTTACATTTTTATCTCTTTAAAATATTCAATGGTGGTGGAGATAAGATTGATCGTCATCGGTTAATAAGTCAAATATATTGTAAAAAGGATTGTGCTTTTGCGATGACAGCTTTTTAAACTACTTTATTTAATTTATAGGAAGAAATAATAATTCCGATGATGAATTACACGAGACATTTGGAAAATCGAAGAATTTGAAGAACTCGGTGATTCATGCTTTAAGAGGAACTGCAGATCATCCAAATTGTGTATTGGACTCCCACTCCTTAGAAGCATTAAAGGAAGTTGCTAGTTGTGATTATGAATACCATTCTTATTGGGGTGCCAAGGCATGTTTCCATATAATAATACTTAATACTTTTTTCTTAATTAATCCGGTTGTCCTAGCATTATATTATCATGTACAAAGTTTAATCGATACTTAATAATTTTTTCTTAATTAATCCAAAGGGCAATCGGTTAATGCTTGGTCGAACAATCAAAGAAGGGGAAGAGTAAACAAAATGTGCGCGTATTTATTTGGAGTTGTGGGGGCATTGTGCTTAAACTTTTAGGGTTATCAGAAACGATGTTTGAGGTAACGAAGAAGGAGTCGTCTTCATCTTCGTCTTCGAGTGATGATGGCGAGCCTGAAGAGGCTTTGGGTCGATTCACATTTGACGAGTCCCCGTTGTTCGTGCCAGCCACAACCATTTTGATGCTACAATTGGTGGCTCTTTCAATTGGTTTGTTGAGGATGGAGGCAAGCCGTGTTGAAGAGTTTGGGGTGGGGGAGATGGTATGTAGTGTGTGGTTGATTTTGTGCTTTTGGCCATTTTTGAAGGGCATGTTTGCAAAAGGAAGATATGGGATTCCATGGCCAATCTTATGGAAGTCTACTGCCTTCACATTATTGTTCATGTTCTTGGTGTTAAAGAACACTACCAAGTAA

mRNA sequence

ATGGCTTCTTCTGGCTCCAAGCAATGGCCTTCCTCTGTGAGTCCTGGTTTGCTTTCGTCTGGCTCCTCCTCCTCGCCACGCGATGGAACTTCTTCCACTATACAAAACCTACCCCCACCGCCTCCTCAAACGGGTGGAGAAGCTCCCTCCGGTGGACATATTCGTGACAACGGCGGATCCGGAGCTGGAGCCGCCGATAATCACCATAAACACGGTGCTGTCTTTGCTAGCAGTGGATTATCCGGCCGACAAATTGGCCTGTTATGTCTCCGACGACGGCGGTTCTCCGGTCACCGTTTTTTCCCTCTCCGAAGCTCTGAAGTTCGCGAAGATTTGGGTTCCATTTTGCAAAAAGTACAAGGAAGAAATAATAATTCCGATGATGAATTACACGAGACATTTGGAAAATCGAAGAATTTGAAGAACTCGGTGATTCATGCTTTAAGAGGAACTGCAGATCATCCAAATTGTGTATTGGACTCCCACTCCTTAGAAGCATTAAAGGAAGTTGCTAGTTGTGATTATGAATACCATTCTTATTGGGGTGCCAAGGCATGGTTATCAGAAACGATGTTTGAGGTAACGAAGAAGGAGTCGTCTTCATCTTCGTCTTCGAGTGATGATGGCGAGCCTGAAGAGGCTTTGGGTCGATTCACATTTGACGAGTCCCCGTTGTTCGTGCCAGCCACAACCATTTTGATGCTACAATTGGTGGCTCTTTCAATTGGTTTGTTGAGGATGGAGGCAAGCCGTGTTGAAGAGTTTGGGGTGGGGGAGATGGTATGTAGTGTGTGGTTGATTTTGTGCTTTTGGCCATTTTTGAAGGGCATGTTTGCAAAAGGAAGATATGGGATTCCATGGCCAATCTTATGGAAGTCTACTGCCTTCACATTATTGTTCATGTTCTTGGTGTTAAAGAACACTACCAAGTAA

Coding sequence (CDS)

ATGGCTTCTTCTGGCTCCAAGCAATGGCCTTCCTCTGTGAGTCCTGGTTTGCTTTCGTCTGGCTCCTCCTCCTCGCCACGCGATGGAACTTCTTCCACTATACAAAACCTACCCCCACCGCCTCCTCAAACGGGTGGAGAAGCTCCCTCCGGTGGACATATTCGTGACAACGGCGGATCCGGAGCTGGAGCCGCCGATAATCACCATAAACACGGTGCTGTCTTTGCTAGCAGTGGATTATCCGGCCGACAAATTGGCCTGTTATGTCTCCGACGACGGCGGTTCTCCGGTCACCGTTTTTTCCCTCTCCGAAGCTCTGAAGTTCGCGAAGATTTGGGTTCCATTTTGCAAAAAGTACAAGGAAGAAATAATAATTCCGATGATGAATTACACGAGACATTTGGAAAATCGAAGAATTTGAAGAACTCGGTGATTCATGCTTTAAGAGGAACTGCAGATCATCCAAATTGTGTATTGGACTCCCACTCCTTAGAAGCATTAAAGGAAGTTGCTAGTTGTGATTATGAATACCATTCTTATTGGGGTGCCAAGGCATGGTTATCAGAAACGATGTTTGAGGTAACGAAGAAGGAGTCGTCTTCATCTTCGTCTTCGAGTGATGATGGCGAGCCTGAAGAGGCTTTGGGTCGATTCACATTTGACGAGTCCCCGTTGTTCGTGCCAGCCACAACCATTTTGATGCTACAATTGGTGGCTCTTTCAATTGGTTTGTTGAGGATGGAGGCAAGCCGTGTTGAAGAGTTTGGGGTGGGGGAGATGGTATGTAGTGTGTGGTTGATTTTGTGCTTTTGGCCATTTTTGAAGGGCATGTTTGCAAAAGGAAGATATGGGATTCCATGGCCAATCTTATGGAAGTCTACTGCCTTCACATTATTGTTCATGTTCTTGGTGTTAAAGAACACTACCAAGTAA

Protein sequence

MASSGSKQWPSSVSPGLLSSGSSSSPRDGTSSTIQNLPPPPPQTGGEAPSGGHIRDNGGSGAGAADNHHKHGAVFASSGLSGRQIGLLCLRRRRFSGHRFFPLRSSEVREDLGSILQKVQGRNNNSDDELHETFGKSKNLKNSVIHALRGTADHPNCVLDSHSLEALKEVASCDYEYHSYWGAKAWLSETMFEVTKKESSSSSSSSDDGEPEEALGRFTFDESPLFVPATTILMLQLVALSIGLLRMEASRVEEFGVGEMVCSVWLILCFWPFLKGMFAKGRYGIPWPILWKSTAFTLLFMFLVLKNTTK

Homology

[Close]

BLAST of Moc02g05110 vs. NCBI nr
Match: XP_008455915.1 (PREDICTED: cellulose synthase-like protein H1 isoform X3 [Cucumis melo])

HSP 1 Score: 191.4 bits (485), Expect = 1.1e-44
Identity = 117/238 (49.16%), Postives = 138/238 (57.98%), Query Frame = 0


Query: 127 DDELHETFGKSKNLKNSVIHALRGTADHPNCVLDSHSLEALKEVASCDYEYHSYWG---- 186
           DDELH+TFG SK+  NS  HALR   D+PN +  S+S+ +LKEVA+ DYE +S WG    
Sbjct: 388 DDELHKTFGNSKDFVNSAAHALRSLTDYPNSL--SNSIISLKEVATSDYEINSCWGTKVQ 447

Query: 187 ----------------------------AKAW---------------------------- 246
                                       A+AW                            
Sbjct: 448 EPVGCIPLLLFVFYNLQQLLQYWETGQSARAWWNNERMARINTICASLLGAVAVVLKLLG 507

Query: 247 LSETMFEVTKKESSSSS---SSSDDGEPEEALGRFTFDESPLFVPATTILMLQLVALSIG 302
           LSET+FEVTKKESSSSS    SS DG+    LGRFTFDESPLFVP TTIL++QL+ALSI 
Sbjct: 508 LSETVFEVTKKESSSSSDDKESSSDGD----LGRFTFDESPLFVPGTTILIIQLLALSIA 567

[Close]

BLAST of Moc02g05110 vs. NCBI nr
Match: XP_038902592.1 (cellulose synthase-like protein H1 isoform X2 [Benincasa hispida])

HSP 1 Score: 167.5 bits (423), Expect = 1.8e-37
Identity = 135/368 (36.68%), Postives = 155/368 (42.12%), Query Frame = 0


Query: 121 GRNNNSDDELHETFGKSKNLKNSVIHALRGTADHPNC-VLDSH-SLEALKEVASCDYEYH 180
           G + N+D+ L +TFGKS+NLK SVIH LRGT  +P    LDSH SL ALKEVASCDYEY+
Sbjct: 409 GSDVNNDELLQKTFGKSENLKKSVIHTLRGTTHYPTTRPLDSHYSLGALKEVASCDYEYN 468

Query: 181 SYWGA------------------------------------------------------- 240
           S WGA                                                       
Sbjct: 469 SSWGAEVGWVYGSATEDLLTGMTIHKKGWKSVLVSPNPKAFLGFAPSGGPTSLRQQKRWV 528

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 529 TGQLEVLFSTKSPIFGLIFDKLQLRQCMFYLWISLWGIRSIPELLYSLLPPYSLIANSPF 588

Query: 301 ----------------------------------KAW----------------------- 308
                                             +AW                       
Sbjct: 589 FPNVQQPAACIPLLLFAIYNLQQLLQYLEVGQSIRAWWNNQKMGRVNTMSAYLFGFIGIL 648

[Close]

BLAST of Moc02g05110 vs. NCBI nr
Match: XP_038902591.1 (cellulose synthase-like protein H1 isoform X1 [Benincasa hispida])

HSP 1 Score: 167.5 bits (423), Expect = 1.8e-37
Identity = 135/368 (36.68%), Postives = 155/368 (42.12%), Query Frame = 0


Query: 121 GRNNNSDDELHETFGKSKNLKNSVIHALRGTADHPNC-VLDSH-SLEALKEVASCDYEYH 180
           G + N+D+ L +TFGKS+NLK SVIH LRGT  +P    LDSH SL ALKEVASCDYEY+
Sbjct: 414 GSDVNNDELLQKTFGKSENLKKSVIHTLRGTTHYPTTRPLDSHYSLGALKEVASCDYEYN 473

Query: 181 SYWGA------------------------------------------------------- 240
           S WGA                                                       
Sbjct: 474 SSWGAEVGWVYGSATEDLLTGMTIHKKGWKSVLVSPNPKAFLGFAPSGGPTSLRQQKRWV 533

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 534 TGQLEVLFSTKSPIFGLIFDKLQLRQCMFYLWISLWGIRSIPELLYSLLPPYSLIANSPF 593

Query: 301 ----------------------------------KAW----------------------- 308
                                             +AW                       
Sbjct: 594 FPNVQQPAACIPLLLFAIYNLQQLLQYLEVGQSIRAWWNNQKMGRVNTMSAYLFGFIGIL 653

[Close]

BLAST of Moc02g05110 vs. NCBI nr
Match: XP_038902679.1 (cellulose synthase-like protein H1 [Benincasa hispida])

HSP 1 Score: 160.2 bits (404), Expect = 2.8e-35
Identity = 81/122 (66.39%), Postives = 99/122 (81.15%), Query Frame = 0


Query: 187 LSETMFEVTKKESSSSSSSSDDGEPEEALGRFTFDESPLFVPATTILMLQLVALSIGLLR 246
           LSET+FE+TKKESSSSS  S+ G+ +  LGR TFDESP FVP TTILM+QL ALSIG L+
Sbjct: 640 LSETVFEITKKESSSSSDDSESGDGD--LGRLTFDESPFFVPVTTILMIQLAALSIGFLQ 699

Query: 247 MEASRVEEFGVGEMVCSVWLILCFWPFLKGMFAKGRYGIPWPILWKSTAFTLLFMFLVLK 306
            + S ++EFGV E++CSVWLILCFWPFLKGMFAKG YG+PWP L+KS+A   LF++L  +
Sbjct: 700 TQPS-IQEFGVAEVMCSVWLILCFWPFLKGMFAKGPYGLPWPTLFKSSALAFLFVYLCQE 758

Query: 307 NT 309
            T
Sbjct: 760 TT 758

[Close]

BLAST of Moc02g05110 vs. NCBI nr
Match: XP_023512253.1 (cellulose synthase-like protein H1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 159.8 bits (403), Expect = 3.7e-35
Identity = 84/124 (67.74%), Postives = 100/124 (80.65%), Query Frame = 0


Query: 187 LSETMFEVTKKESSSSSSSSDDGEPEEALGRFTFDESPLFVPATTILMLQLVALSIGLLR 246
           LSET FEVTKK    SS+S+D+ E +E LGRFTF+ESPLF+PATTI+M+QL+ALSIGL R
Sbjct: 619 LSETTFEVTKK---GSSTSNDEDEVKEDLGRFTFNESPLFIPATTIMMIQLIALSIGLSR 678

Query: 247 -MEASR--VEEFGVGEMVCSVWLILCFWPFLKGMFAKGRYGIPWPILWKSTAFTLLFMFL 306
            M+A    + E  +GEM+CS WLILCFWPFLKGMFAKGR+GIPWP L KS+A TLLF+F 
Sbjct: 679 SMKAGSHVITELPIGEMICSAWLILCFWPFLKGMFAKGRFGIPWPTLCKSSALTLLFVFF 738

Query: 307 VLKN 308
            L N
Sbjct: 739 ALTN 739

[Close]

BLAST of Moc02g05110 vs. ExPASy Swiss-Prot
Match: Q339N5 (Cellulose synthase-like protein H1 OS=Oryza sativa subsp. japonica OX=39947 GN=CSLH1 PE=2 SV=2)

HSP 1 Score: 101.7 bits (252), Expect = 1.6e-20
Identity = 52/124 (41.94%), Postives = 75/124 (60.48%), Query Frame = 0


Query: 188 SETMFEVTKKESSSSSSSSDDGEPEEALGRFTFDESPLFVPATTILMLQLVALSIGLLRM 247
           SET+FEVT+K+ S+S   S+  EPE   GRFTFDES +F+P T + ML ++A+++G  R+
Sbjct: 629 SETVFEVTRKDKSTSDGDSNTDEPEP--GRFTFDESTVFIPVTALAMLSVIAIAVGAWRV 688

Query: 248 EASRVEEF----GVGEMVCSVWLILCFWPFLKGMFAKGRYGIPWPILWKSTAFTLLFMFL 307
                E      G+ E +   WL+LCF P L+G+   GRYGIPW I  K+     +F+  
Sbjct: 689 VLVTTEGLPGGPGISEFISCGWLVLCFMPLLRGLVGSGRYGIPWSIKMKACLLVAIFLLF 748

HSP 2 Score: 42.7 bits (99), Expect = 8.6e-03
Identity = 24/70 (34.29%), Postives = 36/70 (51.43%), Query Frame = 0


Query: 125 NSDDELHETFGKSKNLKNSVIHALRGTADHPNCVLDSHSLEALKEVASCDYEYHSYWGAK 184
           +S+ ELH  FG S N K S    + G       V  S  ++  KEVA+C+YE  + WG +
Sbjct: 389 SSNKELHSKFGSSNNFKESARDVIYGNLSTEPIVDISSCVDVAKEVAACNYEIGTCWGQE 448

Query: 185 -AWLSETMFE 194
             W+  ++ E
Sbjct: 449 VGWVYGSLTE 458

[Close]

BLAST of Moc02g05110 vs. ExPASy Swiss-Prot
Match: Q7XUU0 (Putative cellulose synthase-like protein H3 OS=Oryza sativa subsp. japonica OX=39947 GN=CSLH3 PE=3 SV=3)

HSP 1 Score: 99.0 bits (245), Expect = 1.0e-19
Identity = 54/127 (42.52%), Postives = 79/127 (62.20%), Query Frame = 0


Query: 187 LSETMFEVTKKESSSS--SSSSDDGEPEEALGRFTFDESPLFVPATTILMLQLVALSIGL 246
           LSET+FEVT+KE S+S  +  +D+ +PE    RFTFD SP+F+P T + ML +VA++IG 
Sbjct: 670 LSETVFEVTRKEKSTSDGNGQNDEVDPE----RFTFDASPVFIPVTALTMLNIVAITIGT 729

Query: 247 LRMEASRVEEF----GVGEMVCSVWLILCFWPFLKGMFAKGRYGIPWPILWKSTAFTLLF 306
            R      E+     G+ E +   WL+LC  PF++G+  KG YGIPW +  K++    LF
Sbjct: 730 WRAVFGTTEDVPGGPGISEFMSCGWLLLCLLPFVRGLVGKGSYGIPWSVKLKASLLVALF 789

Query: 307 MFLVLKN 308
           +F   +N
Sbjct: 790 LFCSNRN 792

[Close]

BLAST of Moc02g05110 vs. ExPASy Swiss-Prot
Match: Q7PC71 (Cellulose synthase-like protein H2 OS=Oryza sativa subsp. indica OX=39946 GN=CSLH2 PE=3 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 3.8e-19
Identity = 54/153 (35.29%), Postives = 87/153 (56.86%), Query Frame = 0


Query: 160 DSHSLEALKEVASCDYEYHSYWGAKAWLSETMFEVTKKESSSSSSSSDDGEPEEALGRFT 219
           ++H ++ +  V++    + +       LSET+FEVT K+   S S  DD       GRFT
Sbjct: 612 NNHRMQRIISVSAWTLAFLTVLLKSLGLSETVFEVTGKD--KSMSDDDDNTDGADPGRFT 671

Query: 220 FDESPLFVPATTILMLQLVALSIGLLRMEASRVEEF----GVGEMVCSVWLILCFWPFLK 279
           FD  P+F+P T + ML +VA+++G  R+     E      G+GE +C  WL+LCF+PF++
Sbjct: 672 FDSLPVFIPVTALAMLNIVAVTVGACRVAFGTAEGVPCAPGIGEFMCCGWLVLCFFPFVR 731

Query: 280 G-MFAKGRYGIPWPILWKSTAFTLLFMFLVLKN 308
           G ++ KG YGIPW +  K++    +F+    +N
Sbjct: 732 GIVWGKGSYGIPWSVKLKASLLVAMFVTFCKRN 762

[Close]

BLAST of Moc02g05110 vs. ExPASy Swiss-Prot
Match: Q7XUT9 (Cellulose synthase-like protein H2 OS=Oryza sativa subsp. japonica OX=39947 GN=CSLH2 PE=3 SV=3)

HSP 1 Score: 97.1 bits (240), Expect = 3.8e-19
Identity = 54/153 (35.29%), Postives = 87/153 (56.86%), Query Frame = 0


Query: 160 DSHSLEALKEVASCDYEYHSYWGAKAWLSETMFEVTKKESSSSSSSSDDGEPEEALGRFT 219
           ++H ++ +  V++    + +       LSET+FEVT K+   S S  DD       GRFT
Sbjct: 612 NNHRMQRIISVSAWTLAFLTVLLKSLGLSETVFEVTGKD--KSMSDDDDNTDGADPGRFT 671

Query: 220 FDESPLFVPATTILMLQLVALSIGLLRMEASRVEEF----GVGEMVCSVWLILCFWPFLK 279
           FD  P+F+P T + ML +VA+++G  R+     E      G+GE +C  WL+LCF+PF++
Sbjct: 672 FDSLPVFIPVTALAMLNIVAVTVGACRVAFGTAEGVPCAPGIGEFMCCGWLVLCFFPFVR 731

Query: 280 G-MFAKGRYGIPWPILWKSTAFTLLFMFLVLKN 308
           G ++ KG YGIPW +  K++    +F+    +N
Sbjct: 732 GIVWGKGSYGIPWSVKLKASLLVAMFVTFCKRN 762

[Close]

BLAST of Moc02g05110 vs. ExPASy Swiss-Prot
Match: Q8RX83 (Cellulose synthase-like protein B3 OS=Arabidopsis thaliana OX=3702 GN=CSLB3 PE=2 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 3.5e-12
Identity = 47/128 (36.72%), Postives = 70/128 (54.69%), Query Frame = 0


Query: 187 LSETMFEVTKKE-------SSSSSSSSDDGEPEEALGRFTFDESPLFVPATTILMLQLVA 246
           +S+T+F VTKK        S S  S  +   P +  G+F FD S  F+P T IL++ L A
Sbjct: 628 ISKTVFIVTKKTMPKTMSGSGSEKSQREVDCPNQDSGKFEFDGSLYFLPGTFILLVNLAA 687

Query: 247 LSIGLLRMEASRVEEFGVGEMVCSVWLILCFWPFLKGMFAKGRYGIPWPILWKSTAFTLL 306
           L+   + ++  R    G+ E    + +++ F PFLKGMF KG+YGIPW  L K+    +L
Sbjct: 688 LAGCSVGLQRHRGGGSGLAEACGCILVVILFLPFLKGMFEKGKYGIPWSTLSKAAFLAVL 747

Query: 307 FMFLVLKN 308
           F+   + N
Sbjct: 748 FVVFSVGN 755

[Close]

BLAST of Moc02g05110 vs. ExPASy TrEMBL
Match: A0A1S3C249 (cellulose synthase-like protein H1 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103495986 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 5.5e-45
Identity = 117/238 (49.16%), Postives = 138/238 (57.98%), Query Frame = 0


Query: 127 DDELHETFGKSKNLKNSVIHALRGTADHPNCVLDSHSLEALKEVASCDYEYHSYWG---- 186
           DDELH+TFG SK+  NS  HALR   D+PN +  S+S+ +LKEVA+ DYE +S WG    
Sbjct: 388 DDELHKTFGNSKDFVNSAAHALRSLTDYPNSL--SNSIISLKEVATSDYEINSCWGTKVQ 447

Query: 187 ----------------------------AKAW---------------------------- 246
                                       A+AW                            
Sbjct: 448 EPVGCIPLLLFVFYNLQQLLQYWETGQSARAWWNNERMARINTICASLLGAVAVVLKLLG 507

Query: 247 LSETMFEVTKKESSSSS---SSSDDGEPEEALGRFTFDESPLFVPATTILMLQLVALSIG 302
           LSET+FEVTKKESSSSS    SS DG+    LGRFTFDESPLFVP TTIL++QL+ALSI 
Sbjct: 508 LSETVFEVTKKESSSSSDDKESSSDGD----LGRFTFDESPLFVPGTTILIIQLLALSIA 567

[Close]

BLAST of Moc02g05110 vs. ExPASy TrEMBL
Match: A0A6J1FVZ4 (cellulose synthase-like protein H1 OS=Cucurbita moschata OX=3662 GN=LOC111448620 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 2.3e-35
Identity = 85/125 (68.00%), Postives = 101/125 (80.80%), Query Frame = 0


Query: 187 LSETMFEVTKKESSSSSSSSDDGEPEEALGRFTFDESPLFVPATTILMLQLVALSIGLLR 246
           LSET FEVTKK     S+S+D+ E +E LGRFTFDESPLFVPATTI+M+QL+ALSIGL R
Sbjct: 623 LSETTFEVTKK---GLSTSNDEDEVKEDLGRFTFDESPLFVPATTIMMIQLMALSIGLSR 682

Query: 247 MEASR---VEEFGVGEMVCSVWLILCFWPFLKGMFAKGRYGIPWPILWKSTAFTLLF-MF 306
              +R   + E  +GEM+CSVWL+LCFWPFLKGMFAKGR+GIPWP L KS+AFTLLF +F
Sbjct: 683 SMEARSYVITELPMGEMICSVWLVLCFWPFLKGMFAKGRFGIPWPTLCKSSAFTLLFVLF 742

Query: 307 LVLKN 308
            + KN
Sbjct: 743 ALTKN 744

[Close]

BLAST of Moc02g05110 vs. ExPASy TrEMBL
Match: A0A6J1FY73 (cellulose synthase-like protein H1 OS=Cucurbita moschata OX=3662 GN=LOC111448396 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 1.2e-34
Identity = 80/122 (65.57%), Postives = 97/122 (79.51%), Query Frame = 0


Query: 187 LSETMFEVTKKESSSSSSSSDDGEPEEALGRFTFDESPLFVPATTILMLQLVALSIGLLR 246
           LSET+FEVTKKESSSSS  +D     + LGRFTFDESP+FVP TTIL++QL ALS+ LLR
Sbjct: 623 LSETVFEVTKKESSSSSDDTDSCSYGD-LGRFTFDESPVFVPGTTILIIQLAALSVALLR 682

Query: 247 MEASRVEEFGVGEMVCSVWLILCFWPFLKGMFAKGRYGIPWPILWKSTAFTLLFMFLVLK 306
           +    V+EFGVGE++C VWLILCFW FLKGMFAKG+YG+PWP L KS+AF  LF+   + 
Sbjct: 683 IRQPVVQEFGVGEVMCCVWLILCFWSFLKGMFAKGKYGLPWPTLRKSSAFAFLFVSFCIM 742

Query: 307 NT 309
           +T
Sbjct: 743 ST 743

[Close]

BLAST of Moc02g05110 vs. ExPASy TrEMBL
Match: A0A6J1JAM8 (cellulose synthase-like protein H1 OS=Cucurbita maxima OX=3661 GN=LOC111484067 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 2.0e-34
Identity = 78/122 (63.93%), Postives = 96/122 (78.69%), Query Frame = 0


Query: 187 LSETMFEVTKKESSSSSSSSDDGEPEEALGRFTFDESPLFVPATTILMLQLVALSIGLLR 246
           LSET+FEVTKKESSSSS  +D     + LGRFTFDESP+FVP TTIL++QL ALS+ LLR
Sbjct: 623 LSETVFEVTKKESSSSSDDTDSSSDGD-LGRFTFDESPVFVPGTTILIIQLAALSVALLR 682

Query: 247 MEASRVEEFGVGEMVCSVWLILCFWPFLKGMFAKGRYGIPWPILWKSTAFTLLFMFLVLK 306
           +    V+EFGVGE++C VWLILCFW FLKGMFAKG+YG+PWP L  S+A   LF++  + 
Sbjct: 683 IRQPVVQEFGVGEVMCCVWLILCFWSFLKGMFAKGKYGLPWPTLRTSSALAFLFVYFCIM 742

Query: 307 NT 309
           +T
Sbjct: 743 ST 743

[Close]

BLAST of Moc02g05110 vs. ExPASy TrEMBL
Match: A0A5D3CGV3 (Cellulose synthase-like protein H1 isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold458G00260 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 5.7e-34
Identity = 82/118 (69.49%), Postives = 93/118 (78.81%), Query Frame = 0


Query: 187 LSETMFEVTKKESSSSS---SSSDDGEPEEALGRFTFDESPLFVPATTILMLQLVALSIG 246
           LSET+FEVTKKESSSSS    SS DG+    LGRFTFDESPLFVP TTIL++QL+ALSI 
Sbjct: 44  LSETVFEVTKKESSSSSDDKESSSDGD----LGRFTFDESPLFVPGTTILIIQLLALSIA 103

Query: 247 LLRMEASRVEEFGVGEMVCSVWLILCFWPFLKGMFAKGRYGIPWPILWKSTAFTLLFM 302
            LR+    V EFGVGE+ CSVWLILCFW FLKGMFAKG+YG+PW  L KS+A   LF+
Sbjct: 104 FLRIRQPNVVEFGVGEVTCSVWLILCFWSFLKGMFAKGKYGLPWSTLCKSSALAFLFV 157

[Close]

BLAST of Moc02g05110 vs. TAIR 10
Match: AT2G32530.1 (cellulose synthase-like B3 )

HSP 1 Score: 73.9 bits (180), Expect = 2.5e-13
Identity = 47/128 (36.72%), Postives = 70/128 (54.69%), Query Frame = 0


Query: 187 LSETMFEVTKKE-------SSSSSSSSDDGEPEEALGRFTFDESPLFVPATTILMLQLVA 246
           +S+T+F VTKK        S S  S  +   P +  G+F FD S  F+P T IL++ L A
Sbjct: 628 ISKTVFIVTKKTMPKTMSGSGSEKSQREVDCPNQDSGKFEFDGSLYFLPGTFILLVNLAA 687

Query: 247 LSIGLLRMEASRVEEFGVGEMVCSVWLILCFWPFLKGMFAKGRYGIPWPILWKSTAFTLL 306
           L+   + ++  R    G+ E    + +++ F PFLKGMF KG+YGIPW  L K+    +L
Sbjct: 688 LAGCSVGLQRHRGGGSGLAEACGCILVVILFLPFLKGMFEKGKYGIPWSTLSKAAFLAVL 747

Query: 307 FMFLVLKN 308
           F+   + N
Sbjct: 748 FVVFSVGN 755

[Close]

BLAST of Moc02g05110 vs. TAIR 10
Match: AT4G15290.1 (Cellulose synthase family protein )

HSP 1 Score: 70.9 bits (172), Expect = 2.1e-12
Identity = 43/112 (38.39%), Postives = 63/112 (56.25%), Query Frame = 0


Query: 195 TKKESSSSSSSSDDGEPEEALGRFTFDESPLFVPATTILMLQLVALSIGLLRMEASRVEE 254
           TK    S  S  +D  P+  LG+F FD S LF+P T I+++ L AL+  L+R++ S    
Sbjct: 641 TKSVYESKPSQGEDDVPKLNLGKFEFDSSGLFIPGTFIMLVNLAALAGYLVRLQRSSCSH 700

Query: 255 FGVG----EMVCSVWLILCFWPFLKGMFAKGRYGIPWPILWKSTAFTLLFMF 303
            G G    E    + +++ F PFLKG+F  G+Y IP   L K+   T+LF+F
Sbjct: 701 GGGGSGLAEACGCILVVMLFLPFLKGLFEHGKYSIPLSTLSKAAFLTVLFVF 752

[Close]

BLAST of Moc02g05110 vs. TAIR 10
Match: AT2G32540.1 (cellulose synthase-like B4 )

HSP 1 Score: 70.1 bits (170), Expect = 3.6e-12
Identity = 46/128 (35.94%), Postives = 71/128 (55.47%), Query Frame = 0


Query: 187 LSETMFEVTKKE-------SSSSSSSSDDGEPEEALGRFTFDESPLFVPATTILMLQLVA 246
           +S+T+F VTKK        S S  S  +   P +  G+F FD S  F+P T I+++ L A
Sbjct: 628 ISKTVFIVTKKTMPETKSGSGSKKSQREVDCPNQDSGKFEFDGSLYFLPGTFIVLVNLAA 687

Query: 247 LSIGLLRMEASRVEEFGVGEMVCSVWLILCFWPFLKGMFAKGRYGIPWPILWKSTAFTLL 306
           L+  L+ +++      G+ E    + +++ F PFLKGMF KG+YGIP+  L K+     L
Sbjct: 688 LAGCLVGLQSRGGGGSGLAEACGCILVVILFLPFLKGMFEKGKYGIPFSTLSKAAFLAAL 747

Query: 307 FMFLVLKN 308
           F+ L + N
Sbjct: 748 FVVLSVGN 755

[Close]

BLAST of Moc02g05110 vs. TAIR 10
Match: AT2G32620.1 (cellulose synthase-like B )

HSP 1 Score: 58.5 bits (140), Expect = 1.1e-08
Identity = 48/133 (36.09%), Postives = 71/133 (53.38%), Query Frame = 0


Query: 187 LSETMFEVTKK----ESSSSS----SSSDDGEPEEALGRFTFDESPLFVPATTILMLQLV 246
           LS+ +F V+KK    E+ S S    S  +D  P    G+  FD S  F+P T I+++ L 
Sbjct: 627 LSKNVFLVSKKTMPVETMSGSGIGPSQREDDGPNS--GKTEFDGSLYFLPGTFIVLVNLA 686

Query: 247 AL---SIGLLRMEASR-VEEFGVGEMVCSVWLILCFWPFLKGMFAKGRYGIPWPILWKST 306
           AL    +GL R   S      G+GE    + +++ F+PFLKG+FAKG+YGIP   L K+ 
Sbjct: 687 ALVGVFVGLQRSSYSHGGGGSGLGEACACILVVMLFFPFLKGLFAKGKYGIPLSTLSKAG 746

Query: 307 AFTLLFMFLVLKN 308
              + F+   + N
Sbjct: 747 FLAVSFVVFSVGN 757

[Close]

BLAST of Moc02g05110 vs. TAIR 10
Match: AT2G32610.1 (cellulose synthase-like B1 )

HSP 1 Score: 57.0 bits (136), Expect = 3.1e-08
Identity = 47/129 (36.43%), Postives = 67/129 (51.94%), Query Frame = 0


Query: 187 LSETMFEVTKKESS-------SSSSSSDDGEPEEALGRFTFDESPLFVPATTILMLQLVA 246
           +SET+F +TKK  +       S  S  +D  P   L +F FD S  F+P T I+++ + A
Sbjct: 628 ISETVFIITKKTVAGTKSALGSGPSQGEDVGPNSDLFKFEFDGSLCFLPGTFIVLVNIAA 687

Query: 247 L---SIGLLRMEASRV-EEFGVGEMVCSVWLILCFWPFLKGMFAKGRYGIPWPILWKSTA 305
           L   S+GL R   S      G+ E    V +++ F PFL G+F KG+YG P   L  S A
Sbjct: 688 LAVFSVGLQRSSYSHEGGGSGLAEACGCVLVMMLFLPFLMGLFKKGKYGTPLSTL--SIA 747

The following BLAST results are available for this feature:

BLAST of Moc02g05110 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008455915.1	1.1e-44	49.16	PREDICTED: cellulose synthase-like protein H1 isoform X3 [Cucumis melo]	[more]
XP_038902592.1	1.8e-37	36.68	cellulose synthase-like protein H1 isoform X2 [Benincasa hispida]	[more]
XP_038902591.1	1.8e-37	36.68	cellulose synthase-like protein H1 isoform X1 [Benincasa hispida]	[more]
XP_038902679.1	2.8e-35	66.39	cellulose synthase-like protein H1 [Benincasa hispida]	[more]
XP_023512253.1	3.7e-35	67.74	cellulose synthase-like protein H1 [Cucurbita pepo subsp. pepo]	[more]

Pages

BLAST of Moc02g05110 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q339N5	1.6e-20	41.94	Cellulose synthase-like protein H1 OS=Oryza sativa subsp. japonica OX=39947 GN=C...	[more]
Q7XUU0	1.0e-19	42.52	Putative cellulose synthase-like protein H3 OS=Oryza sativa subsp. japonica OX=3...	[more]
Q7PC71	3.8e-19	35.29	Cellulose synthase-like protein H2 OS=Oryza sativa subsp. indica OX=39946 GN=CSL...	[more]
Q7XUT9	3.8e-19	35.29	Cellulose synthase-like protein H2 OS=Oryza sativa subsp. japonica OX=39947 GN=C...	[more]
Q8RX83	3.5e-12	36.72	Cellulose synthase-like protein B3 OS=Arabidopsis thaliana OX=3702 GN=CSLB3 PE=2...	[more]

BLAST of Moc02g05110 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C249	5.5e-45	49.16	cellulose synthase-like protein H1 isoform X3 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A6J1FVZ4	2.3e-35	68.00	cellulose synthase-like protein H1 OS=Cucurbita moschata OX=3662 GN=LOC111448620...	[more]
A0A6J1FY73	1.2e-34	65.57	cellulose synthase-like protein H1 OS=Cucurbita moschata OX=3662 GN=LOC111448396...	[more]
A0A6J1JAM8	2.0e-34	63.93	cellulose synthase-like protein H1 OS=Cucurbita maxima OX=3661 GN=LOC111484067 P...	[more]
A0A5D3CGV3	5.7e-34	69.49	Cellulose synthase-like protein H1 isoform X3 OS=Cucumis melo var. makuwa OX=119...	[more]

BLAST of Moc02g05110 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G32530.1	2.5e-13	36.72	cellulose synthase-like B3	[more]
AT4G15290.1	2.1e-12	38.39	Cellulose synthase family protein	[more]
AT2G32540.1	3.6e-12	35.94	cellulose synthase-like B4	[more]
AT2G32620.1	1.1e-08	36.09	cellulose synthase-like B	[more]
AT2G32610.1	3.1e-08	36.43	cellulose synthase-like B1	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005150	Cellulose synthase	PFAM	PF03552	Cellulose_synt	coord: 203..283 e-value: 1.4E-7 score: 30.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..68
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..34
None	No IPR available	PANTHER	PTHR13301:SF53	CELLULOSE SYNTHASE-LIKE PROTEIN B1-RELATED	coord: 186..303
None	No IPR available	PANTHER	PTHR13301:SF53	CELLULOSE SYNTHASE-LIKE PROTEIN B1-RELATED	coord: 121..184
None	No IPR available	PANTHER	PTHR13301	X-BOX TRANSCRIPTION FACTOR-RELATED	coord: 121..184 coord: 186..303

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc02g05110.1	Moc02g05110.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030244	cellulose biosynthetic process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0016760	cellulose synthase (UDP-forming) activity