Moc01g33590 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc01g33590
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	F-box protein SKIP19-like
Location	chr1: 23671296 .. 23671694 (+)
RNA-Seq Expression	Moc01g33590
Synteny	Moc01g33590

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCAGGTGATGAGGAAGCCCTTGCTATTGCTGAAAATATGCCTAATTTGCATCACCTCCAGATATTTGACAACAGCCTAACTAACAGGGGCTTGCAGGCCATTCTTGATGGTTGTCCTGATCTGGAATCTCTTGATTTACGTCACTGTTTCAACTTGAATTTGGTGGGACCATTGGGAACTAAATGTGCTGAAAGGATCAAAAGTTTGCGCCTGCCTCATGATCCCACTGATGATATTCGTTATGATTCTCATTCTCATGGTGAAGATTACCCTTTAACTTTCTACGACTCCGATGATGACTACGATAACTACAACAACTACGACAACTACTGCTATGAATCCTTTTGGGACTCTGATTTCTCTGACTGTGACTATGCAGATTTCTTCTATCCTTGA

mRNA sequence

ATGCCAGGTGATGAGGAAGCCCTTGCTATTGCTGAAAATATGCCTAATTTGCATCACCTCCAGATATTTGACAACAGCCTAACTAACAGGGGCTTGCAGGCCATTCTTGATGGTTGTCCTGATCTGGAATCTCTTGATTTACGTCACTGTTTCAACTTGAATTTGGTGGGACCATTGGGAACTAAATGTGCTGAAAGGATCAAAAGTTTGCGCCTGCCTCATGATCCCACTGATGATATTCGTTATGATTCTCATTCTCATGGTGAAGATTACCCTTTAACTTTCTACGACTCCGATGATGACTACGATAACTACAACAACTACGACAACTACTGCTATGAATCCTTTTGGGACTCTGATTTCTCTGACTGTGACTATGCAGATTTCTTCTATCCTTGA

Coding sequence (CDS)

ATGCCAGGTGATGAGGAAGCCCTTGCTATTGCTGAAAATATGCCTAATTTGCATCACCTCCAGATATTTGACAACAGCCTAACTAACAGGGGCTTGCAGGCCATTCTTGATGGTTGTCCTGATCTGGAATCTCTTGATTTACGTCACTGTTTCAACTTGAATTTGGTGGGACCATTGGGAACTAAATGTGCTGAAAGGATCAAAAGTTTGCGCCTGCCTCATGATCCCACTGATGATATTCGTTATGATTCTCATTCTCATGGTGAAGATTACCCTTTAACTTTCTACGACTCCGATGATGACTACGATAACTACAACAACTACGACAACTACTGCTATGAATCCTTTTGGGACTCTGATTTCTCTGACTGTGACTATGCAGATTTCTTCTATCCTTGA

Protein sequence

MPGDEEALAIAENMPNLHHLQIFDNSLTNRGLQAILDGCPDLESLDLRHCFNLNLVGPLGTKCAERIKSLRLPHDPTDDIRYDSHSHGEDYPLTFYDSDDDYDNYNNYDNYCYESFWDSDFSDCDYADFFYP

Homology

[Close]

BLAST of Moc01g33590 vs. NCBI nr
Match: KAG6581459.1 (F-box protein SKIP19, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 144.4 bits (363), Expect = 6.8e-31
Identity = 83/134 (61.94%), Postives = 94/134 (70.15%), Query Frame = 0


Query: 4   DEEALAIAENMPNLHHLQIFDNSLTNRGLQAILDGCPDLESLDLRHCFNLNLVGPLGTKC 63
           D+ ALAIAENMPNL HLQIF NSLTNRGL+AILDGCPDLESLDLR CFNLNL G LG KC
Sbjct: 184 DKGALAIAENMPNLRHLQIFGNSLTNRGLEAILDGCPDLESLDLRQCFNLNLAGQLGAKC 243

Query: 64  AERIKSLRLPHDPTDDIRYDSH------SHGEDYPLTFYDSDDDYDNYNNYDNYCYESFW 123
           +E+IK+LRLPHDPTDD  Y +        + EDY   F  SD D     + D+Y YE   
Sbjct: 244 SEKIKNLRLPHDPTDDYEYSTEIVEYGDDYEEDYGYPFGLSDTDL--LTDDDDY-YEFSG 303

Query: 124 DSDFSDCDYADFFY 132
            SDFS  DY D ++
Sbjct: 304 GSDFS--DYTDLYF 312

[Close]

BLAST of Moc01g33590 vs. NCBI nr
Match: XP_022146630.1 (F-box protein SKIP19-like [Momordica charantia])

HSP 1 Score: 144.1 bits (362), Expect = 8.9e-31
Identity = 82/136 (60.29%), Postives = 95/136 (69.85%), Query Frame = 0


Query: 4   DEEALAIAENMPNLHHLQIFDNSLTNRGLQAILDGCPDLESLDLRHCFNLNLVGPLGTKC 63
           D +A+AIAENMPNL +LQIF +SLT+RGLQAILDGCPDLESLDLR CFNL+LVG LG +C
Sbjct: 180 DRDAIAIAENMPNLRYLQIFGSSLTDRGLQAILDGCPDLESLDLRQCFNLDLVGQLGVEC 239

Query: 64  AERIKSLRLPHDPTDDIRY--------DSHSHGEDYPLTFYDSDDDYDNYNNYDNYCYES 123
           AERIK LRLPHDPTDD  +        D  S  EDYP  F D D     +   D+  YE 
Sbjct: 240 AERIKHLRLPHDPTDDYEFIVETDGFGDDDSLDEDYPSGFSDID-----FLTEDDDYYEW 299

Query: 124 FWDSDFSDCDYADFFY 132
              S+FS  DYADF++
Sbjct: 300 SGGSNFS--DYADFYF 308

[Close]

BLAST of Moc01g33590 vs. NCBI nr
Match: KAG7034751.1 (Protein BREAST CANCER SUSCEPTIBILITY 1-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 143.7 bits (361), Expect = 1.2e-30
Identity = 83/132 (62.88%), Postives = 93/132 (70.45%), Query Frame = 0


Query: 4   DEEALAIAENMPNLHHLQIFDNSLTNRGLQAILDGCPDLESLDLRHCFNLNLVGPLGTKC 63
           D+ ALAIAENMPNL HLQIF NSLTNRGL+AILDGCPDLESLDLR CFNLNL G LG KC
Sbjct: 184 DKGALAIAENMPNLRHLQIFGNSLTNRGLEAILDGCPDLESLDLRQCFNLNLAGQLGAKC 243

Query: 64  AERIKSLRLPHDPTDDIRYDSH------SHGEDYPLTFYDSDDDYDNYNNYDNYCYESFW 123
           +E+IK+LRLPHDPTDD  + +        + EDY   F  SD D     + D+Y YE   
Sbjct: 244 SEKIKNLRLPHDPTDDYEFSTEIVEYGDDYEEDYGYPFGLSDTDL--LTDDDDY-YEFSG 303

Query: 124 DSDFSDCDYADF 130
            SDFS  DY DF
Sbjct: 304 GSDFS--DYTDF 310

[Close]

BLAST of Moc01g33590 vs. NCBI nr
Match: XP_022925897.1 (F-box protein SKIP19-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 142.9 bits (359), Expect = 2.0e-30
Identity = 82/134 (61.19%), Postives = 94/134 (70.15%), Query Frame = 0


Query: 4   DEEALAIAENMPNLHHLQIFDNSLTNRGLQAILDGCPDLESLDLRHCFNLNLVGPLGTKC 63
           D+ ALAIAENMPNL HLQIF NSLTNRGL+AILDGCPDLESLDLR CFNLNL G LG KC
Sbjct: 184 DKGALAIAENMPNLRHLQIFGNSLTNRGLEAILDGCPDLESLDLRQCFNLNLAGQLGAKC 243

Query: 64  AERIKSLRLPHDPTDDIRYDSH------SHGEDYPLTFYDSDDDYDNYNNYDNYCYESFW 123
           +E+IK+LRLPHDPTDD  + +        + EDY   F  SD D     + D+Y YE   
Sbjct: 244 SEKIKNLRLPHDPTDDYEFSTEIVEYGDDYEEDYGYPFGLSDTDL--LTDDDDY-YEFSG 303

Query: 124 DSDFSDCDYADFFY 132
            SDFS  DY D ++
Sbjct: 304 GSDFS--DYTDLYF 312

[Close]

BLAST of Moc01g33590 vs. NCBI nr
Match: XP_023543623.1 (F-box protein SKIP19-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 142.9 bits (359), Expect = 2.0e-30
Identity = 82/134 (61.19%), Postives = 94/134 (70.15%), Query Frame = 0


Query: 4   DEEALAIAENMPNLHHLQIFDNSLTNRGLQAILDGCPDLESLDLRHCFNLNLVGPLGTKC 63
           D+ ALAIAENMPNL HLQIF NSLTNRGL+AILDGCPDLESLDLR CFNLNL G LG KC
Sbjct: 184 DKGALAIAENMPNLRHLQIFGNSLTNRGLEAILDGCPDLESLDLRQCFNLNLAGQLGAKC 243

Query: 64  AERIKSLRLPHDPTDDIRYDSH------SHGEDYPLTFYDSDDDYDNYNNYDNYCYESFW 123
           +E+IK+LRLPHDPTDD  + +        + EDY   F  SD D     + D+Y YE   
Sbjct: 244 SEKIKNLRLPHDPTDDYEFSTEIVEYGDDYEEDYGYPFGLSDTDL--LTDDDDY-YEFSG 303

Query: 124 DSDFSDCDYADFFY 132
            SDFS  DY D ++
Sbjct: 304 GSDFS--DYTDLYF 312

[Close]

BLAST of Moc01g33590 vs. ExPASy Swiss-Prot
Match: Q9M0U7 (Putative F-box protein At4g05475 OS=Arabidopsis thaliana OX=3702 GN=At4g05475 PE=4 SV=2)

HSP 1 Score: 107.1 bits (266), Expect = 1.6e-22
Identity = 51/80 (63.75%), Postives = 59/80 (73.75%), Query Frame = 0


Query: 4   DEEALAIAENMPNLHHLQIFDNSLTNRGLQAILDGCPDLES-LDLRHCFNLNLVGPLGTK 63
           D++ALAIAE+MP L HLQ+  N LTN GL AILDGCP LE  LD+R CFN+NLVG L  +
Sbjct: 213 DDDALAIAESMPKLRHLQLMGNGLTNTGLNAILDGCPHLEEHLDVRKCFNINLVGNLEKR 272

Query: 64  CAERIKSLRLPHDPTDDIRY 83
           C +RIK LR PHD T D  Y
Sbjct: 273 CMKRIKELRRPHDSTADYPY 292

[Close]

BLAST of Moc01g33590 vs. ExPASy Swiss-Prot
Match: Q9M0U8 (Putative F-box/LRR-repeat protein 21 OS=Arabidopsis thaliana OX=3702 GN=FBL21 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 7.8e-22
Identity = 49/80 (61.25%), Postives = 58/80 (72.50%), Query Frame = 0


Query: 4   DEEALAIAENMPNLHHLQIFDNSLTNRGLQAILDGCPDLESLDLRHCFNLNLVGPLGTKC 63
           D++ALAIAE+MP LHHLQ+  N LTN GL AILDGCP LE LD+R CF ++LVG L  +C
Sbjct: 223 DDDALAIAESMPKLHHLQLMANRLTNTGLNAILDGCPHLEHLDVRKCFRISLVGNLEKRC 282

Query: 64  AERIKSLRLPHDPTDDIRYD 84
            E IK LR P D T D  Y+
Sbjct: 283 LEMIKELRRPGDSTADYPYN 302

[Close]

BLAST of Moc01g33590 vs. ExPASy Swiss-Prot
Match: Q9S9V9 (Putative F-box/LRR-repeat protein 23 OS=Arabidopsis thaliana OX=3702 GN=FBL23 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.3e-21
Identity = 55/105 (52.38%), Postives = 69/105 (65.71%), Query Frame = 0


Query: 4   DEEALAIAENMPNLHHLQIFDNSLTNRGLQAILDGCPDLESLDLRHCFNLNLVGPLGTKC 63
           D+ A AIAE+MP L HLQ+  N LTN+GL AILDGCP LE LDLR CFN+NLVG L  +C
Sbjct: 349 DDNAKAIAESMPELRHLQLLGNGLTNKGLNAILDGCPHLEHLDLRQCFNINLVGDLKKRC 408

Query: 64  AERIKSLRLPHDPTDDIRYDSHSHGEDYPLTFYDSDDDYDNYNNY 109
            ERIK LR P+D  D    DS    ++  +T + S  +  +Y+ Y
Sbjct: 409 FERIKDLRCPNDSDD----DSDDGSDNGAVTTFGSQFNETDYHWY 449

[Close]

BLAST of Moc01g33590 vs. ExPASy Swiss-Prot
Match: Q9M0U9 (F-box protein SKIP19 OS=Arabidopsis thaliana OX=3702 GN=SKIP19 PE=1 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 3.0e-21
Identity = 60/129 (46.51%), Postives = 76/129 (58.91%), Query Frame = 0


Query: 4   DEEALAIAENMPNLHHLQIFDNSLTNRGLQAILDGCPDLESLDLRHCFNLNLVGPLGTKC 63
           D++ALAIAE MP L HLQ+  N L++ GL AILD C +LE LDLR CFN+NLVG L  +C
Sbjct: 181 DDDALAIAETMPKLRHLQLCGNGLSDTGLNAILDNCSNLEHLDLRRCFNVNLVGDLQKRC 240

Query: 64  AERIKSLRLPHDPTDDIRYDSHSHGEDYPLTFYD---SDDDYDNYNNYDNYCYESFWDSD 123
            E +K +R P+D   DI   S    + Y  +  D    DDD++ Y       Y+    SD
Sbjct: 241 FESVKVVRHPNDSIHDIDIGSSEDEDPYDFSDIDLMSGDDDFEGY-------YDFSGASD 300

Query: 124 FSDCDYADF 130
           FSD D  DF
Sbjct: 301 FSDYDQFDF 302

[Close]

BLAST of Moc01g33590 vs. ExPASy Swiss-Prot
Match: Q9M0U6 (Putative F-box/LRR-repeat protein 22 OS=Arabidopsis thaliana OX=3702 GN=FBL22 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 5.1e-21
Identity = 58/110 (52.73%), Postives = 66/110 (60.00%), Query Frame = 0


Query: 4   DEEALAIAENMPNLHHLQIFDNSLTNRGLQAILDGCPDLESLDLRHCFNLNLVGPLGTKC 63
           D +ALAIA+ MP L HLQ+  N LTN GL AILDGCP LE LDLR CFN+NL G L  +C
Sbjct: 192 DNDALAIADTMPGLLHLQLISNGLTNIGLNAILDGCPHLECLDLRQCFNINLFGDLERQC 251

Query: 64  AERIKSLRLPHDPTDDIRY----DSHS----HGEDYPLTFYDSDDDYDNY 106
            ERIK  R P+D  DD  Y    D+ S     GE+     Y SDD    Y
Sbjct: 252 LERIKDFRCPNDVLDDYNYVIFSDNGSIEDEKGEEEENYSYGSDDTEYGY 301

[Close]

BLAST of Moc01g33590 vs. ExPASy TrEMBL
Match: A0A6J1CXS5 (F-box protein SKIP19-like OS=Momordica charantia OX=3673 GN=LOC111015784 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 4.3e-31
Identity = 82/136 (60.29%), Postives = 95/136 (69.85%), Query Frame = 0


Query: 4   DEEALAIAENMPNLHHLQIFDNSLTNRGLQAILDGCPDLESLDLRHCFNLNLVGPLGTKC 63
           D +A+AIAENMPNL +LQIF +SLT+RGLQAILDGCPDLESLDLR CFNL+LVG LG +C
Sbjct: 180 DRDAIAIAENMPNLRYLQIFGSSLTDRGLQAILDGCPDLESLDLRQCFNLDLVGQLGVEC 239

Query: 64  AERIKSLRLPHDPTDDIRY--------DSHSHGEDYPLTFYDSDDDYDNYNNYDNYCYES 123
           AERIK LRLPHDPTDD  +        D  S  EDYP  F D D     +   D+  YE 
Sbjct: 240 AERIKHLRLPHDPTDDYEFIVETDGFGDDDSLDEDYPSGFSDID-----FLTEDDDYYEW 299

Query: 124 FWDSDFSDCDYADFFY 132
              S+FS  DYADF++
Sbjct: 300 SGGSNFS--DYADFYF 308

[Close]

BLAST of Moc01g33590 vs. ExPASy TrEMBL
Match: A0A6J1ECV6 (F-box protein SKIP19-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111433172 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 9.6e-31
Identity = 82/134 (61.19%), Postives = 94/134 (70.15%), Query Frame = 0


Query: 4   DEEALAIAENMPNLHHLQIFDNSLTNRGLQAILDGCPDLESLDLRHCFNLNLVGPLGTKC 63
           D+ ALAIAENMPNL HLQIF NSLTNRGL+AILDGCPDLESLDLR CFNLNL G LG KC
Sbjct: 184 DKGALAIAENMPNLRHLQIFGNSLTNRGLEAILDGCPDLESLDLRQCFNLNLAGQLGAKC 243

Query: 64  AERIKSLRLPHDPTDDIRYDSH------SHGEDYPLTFYDSDDDYDNYNNYDNYCYESFW 123
           +E+IK+LRLPHDPTDD  + +        + EDY   F  SD D     + D+Y YE   
Sbjct: 244 SEKIKNLRLPHDPTDDYEFSTEIVEYGDDYEEDYGYPFGLSDTDL--LTDDDDY-YEFSG 303

Query: 124 DSDFSDCDYADFFY 132
            SDFS  DY D ++
Sbjct: 304 GSDFS--DYTDLYF 312

[Close]

BLAST of Moc01g33590 vs. ExPASy TrEMBL
Match: A0A6J1ILH5 (F-box protein SKIP19-like OS=Cucurbita maxima OX=3661 GN=LOC111478528 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 1.6e-30
Identity = 80/126 (63.49%), Postives = 90/126 (71.43%), Query Frame = 0


Query: 4   DEEALAIAENMPNLHHLQIFDNSLTNRGLQAILDGCPDLESLDLRHCFNLNLVGPLGTKC 63
           D+ ALAIAENMPNL HLQIF NSLTNRGL+AILDGCPDLESLDLR CFNLNL G LG KC
Sbjct: 184 DKGALAIAENMPNLRHLQIFGNSLTNRGLEAILDGCPDLESLDLRQCFNLNLAGQLGAKC 243

Query: 64  AERIKSLRLPHDPTDDIRYDSH------SHGEDYPLTFYDSDDDYDNYNNYDNYCYESFW 123
           +E+IK+LRLPHDPTDD  + +        + EDY   F  SD D     + D+Y YE   
Sbjct: 244 SEKIKNLRLPHDPTDDYEFSTEIVEYGDDYEEDYGYPFGLSDTDL--LTDDDDY-YEFSG 303

[Close]

BLAST of Moc01g33590 vs. ExPASy TrEMBL
Match: A0A6J1EGI8 (F-box protein SKIP19-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111433172 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 1.6e-30
Identity = 80/126 (63.49%), Postives = 90/126 (71.43%), Query Frame = 0


Query: 4   DEEALAIAENMPNLHHLQIFDNSLTNRGLQAILDGCPDLESLDLRHCFNLNLVGPLGTKC 63
           D+ ALAIAENMPNL HLQIF NSLTNRGL+AILDGCPDLESLDLR CFNLNL G LG KC
Sbjct: 184 DKGALAIAENMPNLRHLQIFGNSLTNRGLEAILDGCPDLESLDLRQCFNLNLAGQLGAKC 243

Query: 64  AERIKSLRLPHDPTDDIRYDSH------SHGEDYPLTFYDSDDDYDNYNNYDNYCYESFW 123
           +E+IK+LRLPHDPTDD  + +        + EDY   F  SD D     + D+Y YE   
Sbjct: 244 SEKIKNLRLPHDPTDDYEFSTEIVEYGDDYEEDYGYPFGLSDTDL--LTDDDDY-YEFSG 303

[Close]

BLAST of Moc01g33590 vs. ExPASy TrEMBL
Match: A0A0A0KIS9 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G525300 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 6.9e-29
Identity = 78/134 (58.21%), Postives = 92/134 (68.66%), Query Frame = 0


Query: 4   DEEALAIAENMPNLHHLQIFDNSLTNRGLQAILDGCPDLESLDLRHCFNLNLVGPLGTKC 63
           D+ ALAIAENMPNL HL IF N+LTN+GL+AILDGC  LESLDLRHCFNLNL G LG KC
Sbjct: 182 DKGALAIAENMPNLRHLHIFGNNLTNKGLEAILDGCSALESLDLRHCFNLNLAGQLGAKC 241

Query: 64  AERIKSLRLPHDPTDDIRY------DSHSHGEDYPLTFYDSDDDYDNYNNYDNYCYESFW 123
           +E+IK LRLPHDPTDD  +      D  ++ +DY   F  SD D     + D+Y YE   
Sbjct: 242 SEKIKDLRLPHDPTDDCEFTTEIVDDDDTYDDDYDYPFGLSDTDL--LTDDDDY-YEFSG 301

Query: 124 DSDFSDCDYADFFY 132
            SDFS  DY D ++
Sbjct: 302 GSDFS--DYTDLYF 310

[Close]

BLAST of Moc01g33590 vs. TAIR 10
Match: AT4G05475.1 (RNI-like superfamily protein )

HSP 1 Score: 107.1 bits (266), Expect = 1.1e-23
Identity = 51/80 (63.75%), Postives = 59/80 (73.75%), Query Frame = 0


Query: 4   DEEALAIAENMPNLHHLQIFDNSLTNRGLQAILDGCPDLES-LDLRHCFNLNLVGPLGTK 63
           D++ALAIAE+MP L HLQ+  N LTN GL AILDGCP LE  LD+R CFN+NLVG L  +
Sbjct: 213 DDDALAIAESMPKLRHLQLMGNGLTNTGLNAILDGCPHLEEHLDVRKCFNINLVGNLEKR 272

Query: 64  CAERIKSLRLPHDPTDDIRY 83
           C +RIK LR PHD T D  Y
Sbjct: 273 CMKRIKELRRPHDSTADYPY 292

[Close]

BLAST of Moc01g33590 vs. TAIR 10
Match: AT4G05470.1 (RNI-like superfamily protein )

HSP 1 Score: 104.8 bits (260), Expect = 5.6e-23
Identity = 49/80 (61.25%), Postives = 58/80 (72.50%), Query Frame = 0


Query: 4   DEEALAIAENMPNLHHLQIFDNSLTNRGLQAILDGCPDLESLDLRHCFNLNLVGPLGTKC 63
           D++ALAIAE+MP LHHLQ+  N LTN GL AILDGCP LE LD+R CF ++LVG L  +C
Sbjct: 223 DDDALAIAESMPKLHHLQLMANRLTNTGLNAILDGCPHLEHLDVRKCFRISLVGNLEKRC 282

Query: 64  AERIKSLRLPHDPTDDIRYD 84
            E IK LR P D T D  Y+
Sbjct: 283 LEMIKELRRPGDSTADYPYN 302

[Close]

BLAST of Moc01g33590 vs. TAIR 10
Match: AT4G05460.1 (RNI-like superfamily protein )

HSP 1 Score: 102.8 bits (255), Expect = 2.1e-22
Identity = 60/129 (46.51%), Postives = 76/129 (58.91%), Query Frame = 0


Query: 4   DEEALAIAENMPNLHHLQIFDNSLTNRGLQAILDGCPDLESLDLRHCFNLNLVGPLGTKC 63
           D++ALAIAE MP L HLQ+  N L++ GL AILD C +LE LDLR CFN+NLVG L  +C
Sbjct: 181 DDDALAIAETMPKLRHLQLCGNGLSDTGLNAILDNCSNLEHLDLRRCFNVNLVGDLQKRC 240

Query: 64  AERIKSLRLPHDPTDDIRYDSHSHGEDYPLTFYD---SDDDYDNYNNYDNYCYESFWDSD 123
            E +K +R P+D   DI   S    + Y  +  D    DDD++ Y       Y+    SD
Sbjct: 241 FESVKVVRHPNDSIHDIDIGSSEDEDPYDFSDIDLMSGDDDFEGY-------YDFSGASD 300

Query: 124 FSDCDYADF 130
           FSD D  DF
Sbjct: 301 FSDYDQFDF 302

[Close]

BLAST of Moc01g33590 vs. TAIR 10
Match: AT4G05490.1 (RNI-like superfamily protein )

HSP 1 Score: 102.1 bits (253), Expect = 3.6e-22
Identity = 58/110 (52.73%), Postives = 66/110 (60.00%), Query Frame = 0


Query: 4   DEEALAIAENMPNLHHLQIFDNSLTNRGLQAILDGCPDLESLDLRHCFNLNLVGPLGTKC 63
           D +ALAIA+ MP L HLQ+  N LTN GL AILDGCP LE LDLR CFN+NL G L  +C
Sbjct: 192 DNDALAIADTMPGLLHLQLISNGLTNIGLNAILDGCPHLECLDLRQCFNINLFGDLERQC 251

Query: 64  AERIKSLRLPHDPTDDIRY----DSHS----HGEDYPLTFYDSDDDYDNY 106
            ERIK  R P+D  DD  Y    D+ S     GE+     Y SDD    Y
Sbjct: 252 LERIKDFRCPNDVLDDYNYVIFSDNGSIEDEKGEEEENYSYGSDDTEYGY 301

[Close]

BLAST of Moc01g33590 vs. TAIR 10
Match: AT4G03630.1 (RNI-like superfamily protein )

HSP 1 Score: 100.9 bits (250), Expect = 8.0e-22
Identity = 47/81 (58.02%), Postives = 57/81 (70.37%), Query Frame = 0


Query: 4   DEEALAIAENMPNLHHLQIFDNSLTNRGLQAILDGCPDLESLDLRHCFNLNLVGPLGTKC 63
           D +AL IA+ MP L  LQ+F N +++ GL AI DGCP LE LDLR CFN+NLVG L  +C
Sbjct: 133 DHDALGIAKRMPELRCLQLFGNRVSDVGLNAIFDGCPHLEHLDLRQCFNINLVGDLEKRC 192

Query: 64  AERIKSLRLPHDPTDDIRYDS 85
            ERIK LR P+D T D  YD+
Sbjct: 193 MERIKDLRRPNDSTADYPYDT 213

The following BLAST results are available for this feature:

BLAST of Moc01g33590 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6581459.1	6.8e-31	61.94	F-box protein SKIP19, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022146630.1	8.9e-31	60.29	F-box protein SKIP19-like [Momordica charantia]	[more]
KAG7034751.1	1.2e-30	62.88	Protein BREAST CANCER SUSCEPTIBILITY 1-like protein [Cucurbita argyrosperma subs...	[more]
XP_022925897.1	2.0e-30	61.19	F-box protein SKIP19-like isoform X1 [Cucurbita moschata]	[more]
XP_023543623.1	2.0e-30	61.19	F-box protein SKIP19-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Moc01g33590 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M0U7	1.6e-22	63.75	Putative F-box protein At4g05475 OS=Arabidopsis thaliana OX=3702 GN=At4g05475 PE...	[more]
Q9M0U8	7.8e-22	61.25	Putative F-box/LRR-repeat protein 21 OS=Arabidopsis thaliana OX=3702 GN=FBL21 PE...	[more]
Q9S9V9	1.3e-21	52.38	Putative F-box/LRR-repeat protein 23 OS=Arabidopsis thaliana OX=3702 GN=FBL23 PE...	[more]
Q9M0U9	3.0e-21	46.51	F-box protein SKIP19 OS=Arabidopsis thaliana OX=3702 GN=SKIP19 PE=1 SV=1	[more]
Q9M0U6	5.1e-21	52.73	Putative F-box/LRR-repeat protein 22 OS=Arabidopsis thaliana OX=3702 GN=FBL22 PE...	[more]

BLAST of Moc01g33590 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CXS5	4.3e-31	60.29	F-box protein SKIP19-like OS=Momordica charantia OX=3673 GN=LOC111015784 PE=4 SV...	[more]
A0A6J1ECV6	9.6e-31	61.19	F-box protein SKIP19-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1114331...	[more]
A0A6J1ILH5	1.6e-30	63.49	F-box protein SKIP19-like OS=Cucurbita maxima OX=3661 GN=LOC111478528 PE=4 SV=1	[more]
A0A6J1EGI8	1.6e-30	63.49	F-box protein SKIP19-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC1114331...	[more]
A0A0A0KIS9	6.9e-29	58.21	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G525300 PE=4 ...	[more]

BLAST of Moc01g33590 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G05475.1	1.1e-23	63.75	RNI-like superfamily protein	[more]
AT4G05470.1	5.6e-23	61.25	RNI-like superfamily protein	[more]
AT4G05460.1	2.1e-22	46.51	RNI-like superfamily protein	[more]
AT4G05490.1	3.6e-22	52.73	RNI-like superfamily protein	[more]
AT4G03630.1	8.0e-22	58.02	RNI-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 2..82 e-value: 1.9E-11 score: 44.9
None	No IPR available	PANTHER	PTHR38926:SF29	BNAA03G57200D PROTEIN	coord: 3..106
None	No IPR available	PANTHER	PTHR38926	F-BOX DOMAIN CONTAINING PROTEIN, EXPRESSED	coord: 3..106
None	No IPR available	SUPERFAMILY	52047	RNI-like	coord: 7..72

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc01g33590.1	Moc01g33590.1	mRNA