Moc01g26230 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc01g26230
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	60S ribosomal protein L26
Location	chr1: 18649872 .. 18650312 (+)
RNA-Seq Expression	Moc01g26230
Synteny	Moc01g26230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGTACAATCCTAGGGTTTCCAGTTCCCGCCGCAAGAACCGCAAGGCGCATTTTTCTGCGCCGTCTAGCGTCCGTCGGGTTATTATGAGTTCTCCTCTCTCCACTGATCTCCGTTCTAAGTACAATGTCCGATCCATGCCGATTCGAAAGGATGATGAGGTCCAAGTCGTCCGTGGAACTTACAAGGGCCGGGAGGGCAAGGTAGTGCAGGTCTATCGTAGAAAATGGGTCATCCACATCGAACGCATCACTCGTGAAAAGGTTAATGGATCCACTGTCAACGTTGGCATCAACCCCTCAAAGGTCGTGATAACGAAACTCAGGTTGGACAAGGACCGCAAGTCACTTCTGGATCGGAAAGCCAAGGGCCGCGCCGCCGCTGACAAGGACAAGGGTACCAAGTTCACCGCCGAGGATATCATGCAGAGCGTCGATTAA

mRNA sequence

ATGAAGTACAATCCTAGGGTTTCCAGTTCCCGCCGCAAGAACCGCAAGGCGCATTTTTCTGCGCCGTCTAGCGTCCGTCGGGTTATTATGAGTTCTCCTCTCTCCACTGATCTCCGTTCTAAGTACAATGTCCGATCCATGCCGATTCGAAAGGATGATGAGGTCCAAGTCGTCCGTGGAACTTACAAGGGCCGGGAGGGCAAGGTAGTGCAGGTCTATCGTAGAAAATGGGTCATCCACATCGAACGCATCACTCGTGAAAAGGTTAATGGATCCACTGTCAACGTTGGCATCAACCCCTCAAAGGTCGTGATAACGAAACTCAGGTTGGACAAGGACCGCAAGTCACTTCTGGATCGGAAAGCCAAGGGCCGCGCCGCCGCTGACAAGGACAAGGGTACCAAGTTCACCGCCGAGGATATCATGCAGAGCGTCGATTAA

Coding sequence (CDS)

ATGAAGTACAATCCTAGGGTTTCCAGTTCCCGCCGCAAGAACCGCAAGGCGCATTTTTCTGCGCCGTCTAGCGTCCGTCGGGTTATTATGAGTTCTCCTCTCTCCACTGATCTCCGTTCTAAGTACAATGTCCGATCCATGCCGATTCGAAAGGATGATGAGGTCCAAGTCGTCCGTGGAACTTACAAGGGCCGGGAGGGCAAGGTAGTGCAGGTCTATCGTAGAAAATGGGTCATCCACATCGAACGCATCACTCGTGAAAAGGTTAATGGATCCACTGTCAACGTTGGCATCAACCCCTCAAAGGTCGTGATAACGAAACTCAGGTTGGACAAGGACCGCAAGTCACTTCTGGATCGGAAAGCCAAGGGCCGCGCCGCCGCTGACAAGGACAAGGGTACCAAGTTCACCGCCGAGGATATCATGCAGAGCGTCGATTAA

Protein sequence

MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD

Homology

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BLAST of Moc01g26230 vs. NCBI nr
Match: XP_022132426.1 (60S ribosomal protein L26-1 [Momordica charantia])

HSP 1 Score: 278.1 bits (710), Expect = 4.4e-71
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 1   MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRG 60
           MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRG
Sbjct: 1   MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRG 60

Query: 61  TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDR 120
           TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDR
Sbjct: 61  TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDR 120

Query: 121 KAKGRAAADKDKGTKFTAEDIMQSVD 147
           KAKGRAAADKDKGTKFTAEDIMQSVD
Sbjct: 121 KAKGRAAADKDKGTKFTAEDIMQSVD 146

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BLAST of Moc01g26230 vs. NCBI nr
Match: OMO50531.1 (Ribosomal protein L26/L24P, eukaryotic/archaeal [Corchorus olitorius] >OMO77971.1 Ribosomal protein L26/L24P, eukaryotic/archaeal [Corchorus capsularis])

HSP 1 Score: 273.9 bits (699), Expect = 8.2e-70
Identity = 141/146 (96.58%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 1   MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRG 60
           MKYNPRVSSSRRKNRKAHFSAPSSVRR++MS+PLS+DLRSKYNVRSMP+RKDDEVQVVRG
Sbjct: 1   MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSSDLRSKYNVRSMPVRKDDEVQVVRG 60

Query: 61  TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDR 120
           TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDR
Sbjct: 61  TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDR 120

Query: 121 KAKGRAAADKDKGTKFTAEDIMQSVD 147
           KAKGRAAADKDKGTKFTAEDIMQSVD
Sbjct: 121 KAKGRAAADKDKGTKFTAEDIMQSVD 146

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BLAST of Moc01g26230 vs. NCBI nr
Match: XP_022751207.1 (60S ribosomal protein L26-1 [Durio zibethinus])

HSP 1 Score: 272.7 bits (696), Expect = 1.8e-69
Identity = 141/146 (96.58%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 1   MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRG 60
           MKYNPRVSSSRRKNRKAHFSAPSSVRRV+MS+PLS+DLRSKYNVRSMP+RKDDEVQVVRG
Sbjct: 1   MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSSDLRSKYNVRSMPVRKDDEVQVVRG 60

Query: 61  TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDR 120
           TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDR
Sbjct: 61  TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDR 120

Query: 121 KAKGRAAADKDKGTKFTAEDIMQSVD 147
           KAKGRAAADKDKGTKF+AEDIMQSVD
Sbjct: 121 KAKGRAAADKDKGTKFSAEDIMQSVD 146

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BLAST of Moc01g26230 vs. NCBI nr
Match: XP_007029307.1 (PREDICTED: 60S ribosomal protein L26-1 [Theobroma cacao] >EOY09809.1 Translation protein SH3-like family protein [Theobroma cacao])

HSP 1 Score: 272.7 bits (696), Expect = 1.8e-69
Identity = 140/146 (95.89%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 1   MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRG 60
           MKYNPRVSSSRRKNRKAHF+APSSVRR++MS+PLS+DLRSKYNVRSMP+RKDDEVQVVRG
Sbjct: 1   MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSAPLSSDLRSKYNVRSMPVRKDDEVQVVRG 60

Query: 61  TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDR 120
           TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDR
Sbjct: 61  TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDR 120

Query: 121 KAKGRAAADKDKGTKFTAEDIMQSVD 147
           KAKGRAAADKDKGTKFTAEDIMQSVD
Sbjct: 121 KAKGRAAADKDKGTKFTAEDIMQSVD 146

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BLAST of Moc01g26230 vs. NCBI nr
Match: XP_012079404.1 (60S ribosomal protein L26-1 [Jatropha curcas] >XP_021629444.1 60S ribosomal protein L26-1 [Manihot esculenta] >KDP32073.1 hypothetical protein JCGZ_12534 [Jatropha curcas] >OAY35577.1 hypothetical protein MANES_12G113600v8 [Manihot esculenta])

HSP 1 Score: 272.7 bits (696), Expect = 1.8e-69
Identity = 140/146 (95.89%), Postives = 145/146 (99.32%), Query Frame = 0


Query: 1   MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRG 60
           MKYNPRVSSSRRKNRKAHF+APSSVRR++MS+PLSTDLR KYNVRSMP+RKDDEVQVVRG
Sbjct: 1   MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRG 60

Query: 61  TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDR 120
           TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDR
Sbjct: 61  TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDR 120

Query: 121 KAKGRAAADKDKGTKFTAEDIMQSVD 147
           KAKGRAAADKDKGTKFTAEDIMQSVD
Sbjct: 121 KAKGRAAADKDKGTKFTAEDIMQSVD 146

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BLAST of Moc01g26230 vs. ExPASy Swiss-Prot
Match: P51414 (60S ribosomal protein L26-1 OS=Arabidopsis thaliana OX=3702 GN=RPL26A PE=2 SV=2)

HSP 1 Score: 259.2 bits (661), Expect = 2.7e-68
Identity = 133/146 (91.10%), Postives = 142/146 (97.26%), Query Frame = 0


Query: 1   MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRG 60
           MKYNPRV+SSRRKNRKAHF+A SS RRVIMSSPLSTDLR KYNVRSMPIRKDDEVQ+VRG
Sbjct: 1   MKYNPRVTSSRRKNRKAHFTASSSERRVIMSSPLSTDLRQKYNVRSMPIRKDDEVQIVRG 60

Query: 61  TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDR 120
           TYKGREGKVVQVYRRKWVIHIERITREKVNG+TVNVGI PSKVVITKLRLDKDRKSLL+R
Sbjct: 61  TYKGREGKVVQVYRRKWVIHIERITREKVNGTTVNVGIQPSKVVITKLRLDKDRKSLLER 120

Query: 121 KAKGRAAADKDKGTKFTAEDIMQSVD 147
           KAKGRAAADK+KGTKFT+ED+MQ+VD
Sbjct: 121 KAKGRAAADKEKGTKFTSEDVMQNVD 146

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BLAST of Moc01g26230 vs. ExPASy Swiss-Prot
Match: Q9FJX2 (60S ribosomal protein L26-2 OS=Arabidopsis thaliana OX=3702 GN=RPL26B PE=2 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 9.8e-66
Identity = 127/146 (86.99%), Postives = 142/146 (97.26%), Query Frame = 0


Query: 1   MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRG 60
           MK+NPRVSSSRRKNRKAHF+APSSVRRV+MSSPLS DLR+K+NVRSMPIRKDDEVQVVRG
Sbjct: 1   MKFNPRVSSSRRKNRKAHFTAPSSVRRVLMSSPLSKDLRNKHNVRSMPIRKDDEVQVVRG 60

Query: 61  TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDR 120
           T+KGREGKV+QVYRRKWVIHIERITREKVNGSTVNVG+N S V+ITKLRLDKDRKSLL+R
Sbjct: 61  TFKGREGKVMQVYRRKWVIHIERITREKVNGSTVNVGVNASNVMITKLRLDKDRKSLLER 120

Query: 121 KAKGRAAADKDKGTKFTAEDIMQSVD 147
           KA GRAAADK+KGTKF+AED+M++VD
Sbjct: 121 KANGRAAADKEKGTKFSAEDVMENVD 146

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BLAST of Moc01g26230 vs. ExPASy Swiss-Prot
Match: Q39411 (60S ribosomal protein L26 OS=Brassica campestris OX=3711 GN=RPL26 PE=2 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 1.3e-62
Identity = 123/145 (84.83%), Postives = 135/145 (93.10%), Query Frame = 0


Query: 1   MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRG 60
           MKYNPRV+SSRR+NRK HF+A SS RRV MSSPLSTDLR KYNVRSMPIRKDDE Q+VRG
Sbjct: 1   MKYNPRVTSSRRRNRKPHFTASSSERRVXMSSPLSTDLRQKYNVRSMPIRKDDEXQIVRG 60

Query: 61  TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDR 120
           TYKGREGK+ QVYRRK VIHIER+TREKVNG+TVNVG+ P+KVVITKLRLDKDRKSLL+R
Sbjct: 61  TYKGREGKLXQVYRRKXVIHIERLTREKVNGTTVNVGVQPTKVVITKLRLDKDRKSLLER 120

Query: 121 KAKGRAAADKDKGTKFTAEDIMQSV 146
           KAKGRAAADKDKGTKFTA D+MQ+V
Sbjct: 121 KAKGRAAADKDKGTKFTAVDVMQNV 145

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BLAST of Moc01g26230 vs. ExPASy Swiss-Prot
Match: P61257 (60S ribosomal protein L26 OS=Bos taurus OX=9913 GN=RPL26 PE=2 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 1.5e-45
Identity = 100/142 (70.42%), Postives = 120/142 (84.51%), Query Frame = 0


Query: 1   MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRG 60
           MK+NP V+S R KNRK HF+APS +RR IMSSPLS +LR KYNVRSMPIRKDDEVQVVRG
Sbjct: 1   MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60

Query: 61  TYKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLD 120
            YKG++ GKVVQVYR+K+VI+IER+ REK NG+TV+VGI+PSKVVIT+L+LDKDRK +L+
Sbjct: 61  HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILE 120

Query: 121 RKAKGRAAADKDKGTKFTAEDI 142
           RKAK R    K+KG K+  E I
Sbjct: 121 RKAKSRQVG-KEKG-KYKEETI 140

[Close]

BLAST of Moc01g26230 vs. ExPASy Swiss-Prot
Match: P61254 (60S ribosomal protein L26 OS=Homo sapiens OX=9606 GN=RPL26 PE=1 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 1.5e-45
Identity = 100/142 (70.42%), Postives = 120/142 (84.51%), Query Frame = 0


Query: 1   MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRG 60
           MK+NP V+S R KNRK HF+APS +RR IMSSPLS +LR KYNVRSMPIRKDDEVQVVRG
Sbjct: 1   MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60

Query: 61  TYKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLD 120
            YKG++ GKVVQVYR+K+VI+IER+ REK NG+TV+VGI+PSKVVIT+L+LDKDRK +L+
Sbjct: 61  HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILE 120

Query: 121 RKAKGRAAADKDKGTKFTAEDI 142
           RKAK R    K+KG K+  E I
Sbjct: 121 RKAKSRQVG-KEKG-KYKEETI 140

[Close]

BLAST of Moc01g26230 vs. ExPASy TrEMBL
Match: A0A6J1BS88 (60S ribosomal protein L26-1 OS=Momordica charantia OX=3673 GN=LOC111005284 PE=3 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 2.1e-71
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 1   MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRG 60
           MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRG
Sbjct: 1   MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRG 60

Query: 61  TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDR 120
           TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDR
Sbjct: 61  TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDR 120

Query: 121 KAKGRAAADKDKGTKFTAEDIMQSVD 147
           KAKGRAAADKDKGTKFTAEDIMQSVD
Sbjct: 121 KAKGRAAADKDKGTKFTAEDIMQSVD 146

[Close]

BLAST of Moc01g26230 vs. ExPASy TrEMBL
Match: A0A1R3I630 (Ribosomal protein L26/L24P, eukaryotic/archaeal OS=Corchorus capsularis OX=210143 GN=CCACVL1_14727 PE=3 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 4.0e-70
Identity = 141/146 (96.58%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 1   MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRG 60
           MKYNPRVSSSRRKNRKAHFSAPSSVRR++MS+PLS+DLRSKYNVRSMP+RKDDEVQVVRG
Sbjct: 1   MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSSDLRSKYNVRSMPVRKDDEVQVVRG 60

Query: 61  TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDR 120
           TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDR
Sbjct: 61  TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDR 120

Query: 121 KAKGRAAADKDKGTKFTAEDIMQSVD 147
           KAKGRAAADKDKGTKFTAEDIMQSVD
Sbjct: 121 KAKGRAAADKDKGTKFTAEDIMQSVD 146

[Close]

BLAST of Moc01g26230 vs. ExPASy TrEMBL
Match: A0A1R3FXG3 (Ribosomal protein L26/L24P, eukaryotic/archaeal OS=Corchorus olitorius OX=93759 GN=COLO4_38036 PE=3 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 4.0e-70
Identity = 141/146 (96.58%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 1   MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRG 60
           MKYNPRVSSSRRKNRKAHFSAPSSVRR++MS+PLS+DLRSKYNVRSMP+RKDDEVQVVRG
Sbjct: 1   MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSSDLRSKYNVRSMPVRKDDEVQVVRG 60

Query: 61  TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDR 120
           TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDR
Sbjct: 61  TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDR 120

Query: 121 KAKGRAAADKDKGTKFTAEDIMQSVD 147
           KAKGRAAADKDKGTKFTAEDIMQSVD
Sbjct: 121 KAKGRAAADKDKGTKFTAEDIMQSVD 146

[Close]

BLAST of Moc01g26230 vs. ExPASy TrEMBL
Match: A0A061F5L5 (Translation protein SH3-like family protein OS=Theobroma cacao OX=3641 GN=TCM_025183 PE=3 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 8.9e-70
Identity = 140/146 (95.89%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 1   MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRG 60
           MKYNPRVSSSRRKNRKAHF+APSSVRR++MS+PLS+DLRSKYNVRSMP+RKDDEVQVVRG
Sbjct: 1   MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSAPLSSDLRSKYNVRSMPVRKDDEVQVVRG 60

Query: 61  TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDR 120
           TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDR
Sbjct: 61  TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDR 120

Query: 121 KAKGRAAADKDKGTKFTAEDIMQSVD 147
           KAKGRAAADKDKGTKFTAEDIMQSVD
Sbjct: 121 KAKGRAAADKDKGTKFTAEDIMQSVD 146

[Close]

BLAST of Moc01g26230 vs. ExPASy TrEMBL
Match: A0A067KAN0 (KOW domain-containing protein OS=Jatropha curcas OX=180498 GN=JCGZ_12534 PE=3 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 8.9e-70
Identity = 140/146 (95.89%), Postives = 145/146 (99.32%), Query Frame = 0


Query: 1   MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRG 60
           MKYNPRVSSSRRKNRKAHF+APSSVRR++MS+PLSTDLR KYNVRSMP+RKDDEVQVVRG
Sbjct: 1   MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRG 60

Query: 61  TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDR 120
           TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDR
Sbjct: 61  TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDR 120

Query: 121 KAKGRAAADKDKGTKFTAEDIMQSVD 147
           KAKGRAAADKDKGTKFTAEDIMQSVD
Sbjct: 121 KAKGRAAADKDKGTKFTAEDIMQSVD 146

[Close]

BLAST of Moc01g26230 vs. TAIR 10
Match: AT3G49910.1 (Translation protein SH3-like family protein )

HSP 1 Score: 259.2 bits (661), Expect = 2.0e-69
Identity = 133/146 (91.10%), Postives = 142/146 (97.26%), Query Frame = 0


Query: 1   MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRG 60
           MKYNPRV+SSRRKNRKAHF+A SS RRVIMSSPLSTDLR KYNVRSMPIRKDDEVQ+VRG
Sbjct: 1   MKYNPRVTSSRRKNRKAHFTASSSERRVIMSSPLSTDLRQKYNVRSMPIRKDDEVQIVRG 60

Query: 61  TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDR 120
           TYKGREGKVVQVYRRKWVIHIERITREKVNG+TVNVGI PSKVVITKLRLDKDRKSLL+R
Sbjct: 61  TYKGREGKVVQVYRRKWVIHIERITREKVNGTTVNVGIQPSKVVITKLRLDKDRKSLLER 120

Query: 121 KAKGRAAADKDKGTKFTAEDIMQSVD 147
           KAKGRAAADK+KGTKFT+ED+MQ+VD
Sbjct: 121 KAKGRAAADKEKGTKFTSEDVMQNVD 146

[Close]

BLAST of Moc01g26230 vs. TAIR 10
Match: AT5G67510.1 (Translation protein SH3-like family protein )

HSP 1 Score: 250.8 bits (639), Expect = 6.9e-67
Identity = 127/146 (86.99%), Postives = 142/146 (97.26%), Query Frame = 0


Query: 1   MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRG 60
           MK+NPRVSSSRRKNRKAHF+APSSVRRV+MSSPLS DLR+K+NVRSMPIRKDDEVQVVRG
Sbjct: 1   MKFNPRVSSSRRKNRKAHFTAPSSVRRVLMSSPLSKDLRNKHNVRSMPIRKDDEVQVVRG 60

Query: 61  TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDR 120
           T+KGREGKV+QVYRRKWVIHIERITREKVNGSTVNVG+N S V+ITKLRLDKDRKSLL+R
Sbjct: 61  TFKGREGKVMQVYRRKWVIHIERITREKVNGSTVNVGVNASNVMITKLRLDKDRKSLLER 120

Query: 121 KAKGRAAADKDKGTKFTAEDIMQSVD 147
           KA GRAAADK+KGTKF+AED+M++VD
Sbjct: 121 KANGRAAADKEKGTKFSAEDVMENVD 146

The following BLAST results are available for this feature:

BLAST of Moc01g26230 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022132426.1	4.4e-71	100.00	60S ribosomal protein L26-1 [Momordica charantia]	[more]
OMO50531.1	8.2e-70	96.58	Ribosomal protein L26/L24P, eukaryotic/archaeal [Corchorus olitorius] >OMO77971....	[more]
XP_022751207.1	1.8e-69	96.58	60S ribosomal protein L26-1 [Durio zibethinus]	[more]
XP_007029307.1	1.8e-69	95.89	PREDICTED: 60S ribosomal protein L26-1 [Theobroma cacao] >EOY09809.1 Translation...	[more]
XP_012079404.1	1.8e-69	95.89	60S ribosomal protein L26-1 [Jatropha curcas] >XP_021629444.1 60S ribosomal prot...	[more]

BLAST of Moc01g26230 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P51414	2.7e-68	91.10	60S ribosomal protein L26-1 OS=Arabidopsis thaliana OX=3702 GN=RPL26A PE=2 SV=2	[more]
Q9FJX2	9.8e-66	86.99	60S ribosomal protein L26-2 OS=Arabidopsis thaliana OX=3702 GN=RPL26B PE=2 SV=1	[more]
Q39411	1.3e-62	84.83	60S ribosomal protein L26 OS=Brassica campestris OX=3711 GN=RPL26 PE=2 SV=1	[more]
P61257	1.5e-45	70.42	60S ribosomal protein L26 OS=Bos taurus OX=9913 GN=RPL26 PE=2 SV=1	[more]
P61254	1.5e-45	70.42	60S ribosomal protein L26 OS=Homo sapiens OX=9606 GN=RPL26 PE=1 SV=1	[more]

BLAST of Moc01g26230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BS88	2.1e-71	100.00	60S ribosomal protein L26-1 OS=Momordica charantia OX=3673 GN=LOC111005284 PE=3 ...	[more]
A0A1R3I630	4.0e-70	96.58	Ribosomal protein L26/L24P, eukaryotic/archaeal OS=Corchorus capsularis OX=21014...	[more]
A0A1R3FXG3	4.0e-70	96.58	Ribosomal protein L26/L24P, eukaryotic/archaeal OS=Corchorus olitorius OX=93759 ...	[more]
A0A061F5L5	8.9e-70	95.89	Translation protein SH3-like family protein OS=Theobroma cacao OX=3641 GN=TCM_02...	[more]
A0A067KAN0	8.9e-70	95.89	KOW domain-containing protein OS=Jatropha curcas OX=180498 GN=JCGZ_12534 PE=3 SV...	[more]

BLAST of Moc01g26230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G49910.1	2.0e-69	91.10	Translation protein SH3-like family protein	[more]
AT5G67510.1	6.9e-67	86.99	Translation protein SH3-like family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005824	KOW	SMART	SM00739	kow_9	coord: 48..75 e-value: 7.4E-6 score: 35.5
IPR005824	KOW	PFAM	PF00467	KOW	coord: 51..82 e-value: 2.9E-9 score: 36.6
IPR005756	Ribosomal protein L26/L24, eukaryotic/archaeal	PFAM	PF16906	Ribosomal_L26	coord: 8..121 e-value: 4.1E-38 score: 130.2
IPR005756	Ribosomal protein L26/L24, eukaryotic/archaeal	TIGRFAM	TIGR01080	TIGR01080	coord: 8..122 e-value: 3.5E-51 score: 170.4
IPR005756	Ribosomal protein L26/L24, eukaryotic/archaeal	PANTHER	PTHR11143	60S RIBOSOMAL PROTEIN L26 FAMILY MEMBER	coord: 1..146
IPR014722	Ribosomal protein L2, domain 2	GENE3D	2.30.30.30		coord: 1..144 e-value: 5.3E-57 score: 193.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR11143:SF16	60S RIBOSOMAL PROTEIN L26-1	coord: 1..146
IPR005825	Ribosomal protein L24/L26, conserved site	PROSITE	PS01108	RIBOSOMAL_L24	coord: 52..69
IPR041988	Ribosomal protein L26/L24, KOW domain	CDD	cd06089	KOW_RPL26	coord: 52..105 e-value: 6.25088E-15 score: 62.9174
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 8..125

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc01g26230.1	Moc01g26230.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002181	cytoplasmic translation
biological_process	GO:0042273	ribosomal large subunit biogenesis
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0015934	large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome