Moc01g21840 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc01g21840
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	DNA topoisomerase 6 subunit A
Location	chr1: 15168918 .. 15170180 (+)
RNA-Seq Expression	Moc01g21840
Synteny	Moc01g21840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGACAAGAGGAAGCGCCGGCGATCTGAACTCAATCCCGACGATGAAGCTCAACTTCCCTTCAAGAATCGCCTCAAACCTGACTCCGCCATTCTTCAAATTATCAAAGAGTTCGGCGACTGCTCCACCGCTCCTTCTTCCTCTTCATCTAAAACCCTCGAAGACCTCGGCCTCTCCTCCACCTGCCGCGAGGTCACCGATCTCTCTCTTTCGTCCGTGCAGTCCACAATTGAATCCCTGATCCTCAAAATTGCTCGCTCCATTCTTTCCGGCAATGGTTTTGCCTTCGACGTTCCTTCTCGATCGGCGGCCAACCAGTTATACGTTCCGGAGCTTGATCGGATCGTGCTGAAGGATAAGACTGCCCTGCGCCCCTACGCCAATATATCCACCGTCCGGAAATCCACCATTACTACTCGCATTCTTCAGCTTGTCCACCAACTCTGCATGAAAAACATCCATGTAACCAAGCGAGATCTGTTCTACACAGATGTGAAGCTCTTCCAGGATCAGACTCAGTCGGATTCGGTGCTTGATGATGTTTCTTGCATTCTCGGCTGTACTCGGTCAAGTCTCAATGTGATTGCTGCGGAGAAAGGTGTGGTAGTGGGAAGACTCATTTTCAGTGACAATGGGGATATGATCGATTGCACTAAAATGGGAATGGGCGGAAAAGCCATTCCACCAAATATTGATAGAGTTGGAGACATGCAGAGCGATGCTTTGTTTATACTCTTAGTTGAGAAAGATGCCGCGTATATTAGGTTAGCCGAGGATAGGTTTTATAATCGATTTCCTTGTATAATTGTGACTGCTAAGGGACAGCCAGATGTGGCCACGAGACTGTTCTTGAGGAAGATGAAGATGGAGCTGAAGCTTCCAGTGCTTGCGCTTGTGGACAGTGATCCATATGGGTTGAAAATTCTCTCTGTCTATGGCTGTGGATCGAAGAATATGTCGTATGATAGTGCTAATTTGACTACTCCAGATATCAAGTGGCTGGGAATAAGGCCCAGTGATTTGGACAAATATAAGATACCGGAGCAGTGCAGGTTACCCATGACAGAGCAGGATATTAAGACTGGGAAAGATCTGTTAGAGGAGGATTTTGTCAAAAAGAATCCTGGTTGGGTTGAAGAGCTCACTTTAATGGTGAAGACAAAGCAGAAGGCTGAAATTCAGGCATTGAGCTCGTTTGGGTTTCAGTATCTGTCAGAGGTTTATTTGCCATTGAAGCTGCAGCAGAAGGATTGGCTGTGA

mRNA sequence

ATGGCTGACAAGAGGAAGCGCCGGCGATCTGAACTCAATCCCGACGATGAAGCTCAACTTCCCTTCAAGAATCGCCTCAAACCTGACTCCGCCATTCTTCAAATTATCAAAGAGTTCGGCGACTGCTCCACCGCTCCTTCTTCCTCTTCATCTAAAACCCTCGAAGACCTCGGCCTCTCCTCCACCTGCCGCGAGGTCACCGATCTCTCTCTTTCGTCCGTGCAGTCCACAATTGAATCCCTGATCCTCAAAATTGCTCGCTCCATTCTTTCCGGCAATGGTTTTGCCTTCGACGTTCCTTCTCGATCGGCGGCCAACCAGTTATACGTTCCGGAGCTTGATCGGATCGTGCTGAAGGATAAGACTGCCCTGCGCCCCTACGCCAATATATCCACCGTCCGGAAATCCACCATTACTACTCGCATTCTTCAGCTTGTCCACCAACTCTGCATGAAAAACATCCATGTAACCAAGCGAGATCTGTTCTACACAGATGTGAAGCTCTTCCAGGATCAGACTCAGTCGGATTCGGTGCTTGATGATGTTTCTTGCATTCTCGGCTGTACTCGGTCAAGTCTCAATGTGATTGCTGCGGAGAAAGGTGTGGTAGTGGGAAGACTCATTTTCAGTGACAATGGGGATATGATCGATTGCACTAAAATGGGAATGGGCGGAAAAGCCATTCCACCAAATATTGATAGAGTTGGAGACATGCAGAGCGATGCTTTGTTTATACTCTTAGTTGAGAAAGATGCCGCGTATATTAGGTTAGCCGAGGATAGGTTTTATAATCGATTTCCTTGTATAATTGTGACTGCTAAGGGACAGCCAGATGTGGCCACGAGACTGTTCTTGAGGAAGATGAAGATGGAGCTGAAGCTTCCAGTGCTTGCGCTTGTGGACAGTGATCCATATGGGTTGAAAATTCTCTCTGTCTATGGCTGTGGATCGAAGAATATGTCGTATGATAGTGCTAATTTGACTACTCCAGATATCAAGTGGCTGGGAATAAGGCCCAGTGATTTGGACAAATATAAGATACCGGAGCAGTGCAGGTTACCCATGACAGAGCAGGATATTAAGACTGGGAAAGATCTGTTAGAGGAGGATTTTGTCAAAAAGAATCCTGGTTGGGTTGAAGAGCTCACTTTAATGGTGAAGACAAAGCAGAAGGCTGAAATTCAGGCATTGAGCTCGTTTGGGTTTCAGTATCTGTCAGAGGTTTATTTGCCATTGAAGCTGCAGCAGAAGGATTGGCTGTGA

Coding sequence (CDS)

ATGGCTGACAAGAGGAAGCGCCGGCGATCTGAACTCAATCCCGACGATGAAGCTCAACTTCCCTTCAAGAATCGCCTCAAACCTGACTCCGCCATTCTTCAAATTATCAAAGAGTTCGGCGACTGCTCCACCGCTCCTTCTTCCTCTTCATCTAAAACCCTCGAAGACCTCGGCCTCTCCTCCACCTGCCGCGAGGTCACCGATCTCTCTCTTTCGTCCGTGCAGTCCACAATTGAATCCCTGATCCTCAAAATTGCTCGCTCCATTCTTTCCGGCAATGGTTTTGCCTTCGACGTTCCTTCTCGATCGGCGGCCAACCAGTTATACGTTCCGGAGCTTGATCGGATCGTGCTGAAGGATAAGACTGCCCTGCGCCCCTACGCCAATATATCCACCGTCCGGAAATCCACCATTACTACTCGCATTCTTCAGCTTGTCCACCAACTCTGCATGAAAAACATCCATGTAACCAAGCGAGATCTGTTCTACACAGATGTGAAGCTCTTCCAGGATCAGACTCAGTCGGATTCGGTGCTTGATGATGTTTCTTGCATTCTCGGCTGTACTCGGTCAAGTCTCAATGTGATTGCTGCGGAGAAAGGTGTGGTAGTGGGAAGACTCATTTTCAGTGACAATGGGGATATGATCGATTGCACTAAAATGGGAATGGGCGGAAAAGCCATTCCACCAAATATTGATAGAGTTGGAGACATGCAGAGCGATGCTTTGTTTATACTCTTAGTTGAGAAAGATGCCGCGTATATTAGGTTAGCCGAGGATAGGTTTTATAATCGATTTCCTTGTATAATTGTGACTGCTAAGGGACAGCCAGATGTGGCCACGAGACTGTTCTTGAGGAAGATGAAGATGGAGCTGAAGCTTCCAGTGCTTGCGCTTGTGGACAGTGATCCATATGGGTTGAAAATTCTCTCTGTCTATGGCTGTGGATCGAAGAATATGTCGTATGATAGTGCTAATTTGACTACTCCAGATATCAAGTGGCTGGGAATAAGGCCCAGTGATTTGGACAAATATAAGATACCGGAGCAGTGCAGGTTACCCATGACAGAGCAGGATATTAAGACTGGGAAAGATCTGTTAGAGGAGGATTTTGTCAAAAAGAATCCTGGTTGGGTTGAAGAGCTCACTTTAATGGTGAAGACAAAGCAGAAGGCTGAAATTCAGGCATTGAGCTCGTTTGGGTTTCAGTATCTGTCAGAGGTTTATTTGCCATTGAAGCTGCAGCAGAAGGATTGGCTGTGA

Protein sequence

MADKRKRRRSELNPDDEAQLPFKNRLKPDSAILQIIKEFGDCSTAPSSSSSKTLEDLGLSSTCREVTDLSLSSVQSTIESLILKIARSILSGNGFAFDVPSRSAANQLYVPELDRIVLKDKTALRPYANISTVRKSTITTRILQLVHQLCMKNIHVTKRDLFYTDVKLFQDQTQSDSVLDDVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELTLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL

Homology

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BLAST of Moc01g21840 vs. NCBI nr
Match: XP_022143741.1 (DNA topoisomerase 6 subunit A [Momordica charantia])

HSP 1 Score: 820.5 bits (2118), Expect = 6.8e-234
Identity = 420/420 (100.00%), Postives = 420/420 (100.00%), Query Frame = 0


Query: 1   MADKRKRRRSELNPDDEAQLPFKNRLKPDSAILQIIKEFGDCSTAPSSSSSKTLEDLGLS 60
           MADKRKRRRSELNPDDEAQLPFKNRLKPDSAILQIIKEFGDCSTAPSSSSSKTLEDLGLS
Sbjct: 1   MADKRKRRRSELNPDDEAQLPFKNRLKPDSAILQIIKEFGDCSTAPSSSSSKTLEDLGLS 60

Query: 61  STCREVTDLSLSSVQSTIESLILKIARSILSGNGFAFDVPSRSAANQLYVPELDRIVLKD 120
           STCREVTDLSLSSVQSTIESLILKIARSILSGNGFAFDVPSRSAANQLYVPELDRIVLKD
Sbjct: 61  STCREVTDLSLSSVQSTIESLILKIARSILSGNGFAFDVPSRSAANQLYVPELDRIVLKD 120

Query: 121 KTALRPYANISTVRKSTITTRILQLVHQLCMKNIHVTKRDLFYTDVKLFQDQTQSDSVLD 180
           KTALRPYANISTVRKSTITTRILQLVHQLCMKNIHVTKRDLFYTDVKLFQDQTQSDSVLD
Sbjct: 121 KTALRPYANISTVRKSTITTRILQLVHQLCMKNIHVTKRDLFYTDVKLFQDQTQSDSVLD 180

Query: 181 DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 240
           DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS
Sbjct: 181 DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 240

Query: 241 DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 300
           DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV
Sbjct: 241 DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 300

Query: 301 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI 360
           DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI
Sbjct: 301 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI 360

Query: 361 KTGKDLLEEDFVKKNPGWVEELTLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 420
           KTGKDLLEEDFVKKNPGWVEELTLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL
Sbjct: 361 KTGKDLLEEDFVKKNPGWVEELTLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 420

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BLAST of Moc01g21840 vs. NCBI nr
Match: XP_022977345.1 (DNA topoisomerase 6 subunit A [Cucurbita maxima])

HSP 1 Score: 798.1 bits (2060), Expect = 3.6e-227
Identity = 408/420 (97.14%), Postives = 413/420 (98.33%), Query Frame = 0


Query: 1   MADKRKRRRSELNPDDEAQLPFKNRLKPDSAILQIIKEFGDCSTAPSSSSSKTLEDLGLS 60
           MADKRKRRRSELNPD EAQLPFKN LK DS ILQI+KEF DCSTAPSSSSSKTL+DLGLS
Sbjct: 1   MADKRKRRRSELNPDVEAQLPFKNSLKSDSIILQILKEFSDCSTAPSSSSSKTLDDLGLS 60

Query: 61  STCREVTDLSLSSVQSTIESLILKIARSILSGNGFAFDVPSRSAANQLYVPELDRIVLKD 120
           S+CREVTDLSLSSVQSTIE LILKIARSILSGNGFAFDVPSRSAANQLYVPELDRIVLKD
Sbjct: 61  SSCREVTDLSLSSVQSTIEDLILKIARSILSGNGFAFDVPSRSAANQLYVPELDRIVLKD 120

Query: 121 KTALRPYANISTVRKSTITTRILQLVHQLCMKNIHVTKRDLFYTDVKLFQDQTQSDSVLD 180
           KTA+RPYANISTVRKSTITTRILQLVHQLC+KNIHVTKRDLFYTDVKLFQDQTQSDSVLD
Sbjct: 121 KTAIRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLD 180

Query: 181 DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 240
           DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS
Sbjct: 181 DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 240

Query: 241 DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 300
           DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV
Sbjct: 241 DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 300

Query: 301 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI 360
           DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKY IPEQCRLPMTEQDI
Sbjct: 301 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYNIPEQCRLPMTEQDI 360

Query: 361 KTGKDLLEEDFVKKNPGWVEELTLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 420
           KTGKDLLEEDFVKKNPGWVEELTLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL
Sbjct: 361 KTGKDLLEEDFVKKNPGWVEELTLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 420

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BLAST of Moc01g21840 vs. NCBI nr
Match: XP_023544835.1 (DNA topoisomerase 6 subunit A [Cucurbita pepo subsp. pepo] >XP_023544836.1 DNA topoisomerase 6 subunit A [Cucurbita pepo subsp. pepo] >XP_023544837.1 DNA topoisomerase 6 subunit A [Cucurbita pepo subsp. pepo] >XP_023544838.1 DNA topoisomerase 6 subunit A [Cucurbita pepo subsp. pepo])

HSP 1 Score: 797.3 bits (2058), Expect = 6.2e-227
Identity = 407/420 (96.90%), Postives = 412/420 (98.10%), Query Frame = 0


Query: 1   MADKRKRRRSELNPDDEAQLPFKNRLKPDSAILQIIKEFGDCSTAPSSSSSKTLEDLGLS 60
           MADKRKRRRSELNPD E QLPFKN LK DS ILQI+KEF DCSTAPSSSSSKTL+DLGLS
Sbjct: 1   MADKRKRRRSELNPDGEVQLPFKNSLKSDSIILQILKEFSDCSTAPSSSSSKTLDDLGLS 60

Query: 61  STCREVTDLSLSSVQSTIESLILKIARSILSGNGFAFDVPSRSAANQLYVPELDRIVLKD 120
           S+CREVTDLSLSSVQSTIE LILKIARSILSGNGFAFDVPSRSAANQLYVPELDRIVLKD
Sbjct: 61  SSCREVTDLSLSSVQSTIEDLILKIARSILSGNGFAFDVPSRSAANQLYVPELDRIVLKD 120

Query: 121 KTALRPYANISTVRKSTITTRILQLVHQLCMKNIHVTKRDLFYTDVKLFQDQTQSDSVLD 180
           KTA+RPYANISTVRKSTITTRILQLVHQLC+KNIHVTKRDLFYTDVKLFQDQTQSDSVLD
Sbjct: 121 KTAIRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLD 180

Query: 181 DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 240
           DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS
Sbjct: 181 DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 240

Query: 241 DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 300
           DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV
Sbjct: 241 DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 300

Query: 301 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI 360
           DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKY IPEQCRLPMTEQDI
Sbjct: 301 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYNIPEQCRLPMTEQDI 360

Query: 361 KTGKDLLEEDFVKKNPGWVEELTLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 420
           KTGKDLLEEDFVKKNPGWVEELTLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL
Sbjct: 361 KTGKDLLEEDFVKKNPGWVEELTLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 420

[Close]

BLAST of Moc01g21840 vs. NCBI nr
Match: XP_022950775.1 (DNA topoisomerase 6 subunit A [Cucurbita moschata] >KAG6603699.1 DNA topoisomerase 6 subunit A, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033876.1 DNA topoisomerase 6 subunit A, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 797.3 bits (2058), Expect = 6.2e-227
Identity = 407/420 (96.90%), Postives = 413/420 (98.33%), Query Frame = 0


Query: 1   MADKRKRRRSELNPDDEAQLPFKNRLKPDSAILQIIKEFGDCSTAPSSSSSKTLEDLGLS 60
           MADKRKRRRSELNPD EAQLPFKN LK DS ILQI+KEF DCSTAPSSSSSKTL+DLGLS
Sbjct: 1   MADKRKRRRSELNPDGEAQLPFKNSLKSDSIILQILKEFSDCSTAPSSSSSKTLDDLGLS 60

Query: 61  STCREVTDLSLSSVQSTIESLILKIARSILSGNGFAFDVPSRSAANQLYVPELDRIVLKD 120
           S+CREVTDLSLSSVQSTIE LILKIARSILSGNGFAFDVPSRSAANQLYVPELDRIVLKD
Sbjct: 61  SSCREVTDLSLSSVQSTIEDLILKIARSILSGNGFAFDVPSRSAANQLYVPELDRIVLKD 120

Query: 121 KTALRPYANISTVRKSTITTRILQLVHQLCMKNIHVTKRDLFYTDVKLFQDQTQSDSVLD 180
           KTA+RPYANISTVRKSTITTRILQLVHQLC+KNIHVTKRDLFYTDVKLFQDQTQSDSVLD
Sbjct: 121 KTAIRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLD 180

Query: 181 DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 240
           DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS
Sbjct: 181 DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 240

Query: 241 DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 300
           DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV
Sbjct: 241 DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 300

Query: 301 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI 360
           DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKY IPEQCRLPMTEQDI
Sbjct: 301 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYNIPEQCRLPMTEQDI 360

Query: 361 KTGKDLLEEDFVKKNPGWVEELTLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 420
           KTGKDLLEEDFVKKNPGWVEEL+LMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL
Sbjct: 361 KTGKDLLEEDFVKKNPGWVEELSLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 420

[Close]

BLAST of Moc01g21840 vs. NCBI nr
Match: XP_038881252.1 (DNA topoisomerase 6 subunit A [Benincasa hispida])

HSP 1 Score: 792.7 bits (2046), Expect = 1.5e-225
Identity = 407/420 (96.90%), Postives = 412/420 (98.10%), Query Frame = 0


Query: 1   MADKRKRRRSELNPDDEAQLPFKNRLKPDSAILQIIKEFGDCSTAPSSSSSKTLEDLGLS 60
           MADKRKRRRSE NPD EAQLPFK  LKPDS ILQI+KEF D STA SSSSSKTL+DLGLS
Sbjct: 1   MADKRKRRRSEPNPDGEAQLPFKKSLKPDSFILQILKEFSDSSTASSSSSSKTLDDLGLS 60

Query: 61  STCREVTDLSLSSVQSTIESLILKIARSILSGNGFAFDVPSRSAANQLYVPELDRIVLKD 120
           S+CREVTDLSLSSVQSTIES+ILKIARSILSGNGFAFDVPSRSAANQLYVPELDRIVLKD
Sbjct: 61  SSCREVTDLSLSSVQSTIESVILKIARSILSGNGFAFDVPSRSAANQLYVPELDRIVLKD 120

Query: 121 KTALRPYANISTVRKSTITTRILQLVHQLCMKNIHVTKRDLFYTDVKLFQDQTQSDSVLD 180
           KTALRPYANISTVRKSTITTRILQLVHQLC+KNIHVTKRDLFYTDVKLFQDQTQSDSVLD
Sbjct: 121 KTALRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLD 180

Query: 181 DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 240
           DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS
Sbjct: 181 DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 240

Query: 241 DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 300
           DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV
Sbjct: 241 DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 300

Query: 301 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI 360
           DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI
Sbjct: 301 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI 360

Query: 361 KTGKDLLEEDFVKKNPGWVEELTLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 420
           KTGKDLLEEDFVKKNPGWVEELTLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL
Sbjct: 361 KTGKDLLEEDFVKKNPGWVEELTLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 420

[Close]

BLAST of Moc01g21840 vs. ExPASy Swiss-Prot
Match: Q9LZ03 (DNA topoisomerase 6 subunit A OS=Arabidopsis thaliana OX=3702 GN=TOP6A PE=1 SV=1)

HSP 1 Score: 701.0 bits (1808), Expect = 7.9e-201
Identity = 361/430 (83.95%), Postives = 397/430 (92.33%), Query Frame = 0


Query: 1   MADKRKRRRSELNPDDEA-QLPFKNRLKPDSAILQIIKEFGDCST-------APSSSSSK 60
           MADK+KR+RS+   DDEA +LPFK+ L+ D  I +++K +   S          SSSSSK
Sbjct: 1   MADKKKRKRSK---DDEAEELPFKSILESDDVITELLKSYISSSIKAAAGAGGASSSSSK 60

Query: 61  --TLEDLGLSSTCREVTDLSLSSVQSTIESLILKIARSILSGNGFAFDVPSRSAANQLYV 120
             TL DL LSS+CREV DLSLSSVQ+ IE++I++IARSIL+G+GF+F VPSR+A+NQLYV
Sbjct: 61  PLTLADLSLSSSCREVADLSLSSVQTEIETVIVQIARSILAGDGFSFSVPSRAASNQLYV 120

Query: 121 PELDRIVLKDKTALRPYANISTVRKSTITTRILQLVHQLCMKNIHVTKRDLFYTDVKLFQ 180
           PELDRIVLKDK+ LRP+A++S+VRK+TITTRIL L+HQLC++NIHVTKRDLFYTDVKLFQ
Sbjct: 121 PELDRIVLKDKSTLRPFASVSSVRKTTITTRILALIHQLCLRNIHVTKRDLFYTDVKLFQ 180

Query: 181 DQTQSDSVLDDVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPP 240
           DQTQSD+VLDDVSC+LGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPP
Sbjct: 181 DQTQSDAVLDDVSCMLGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPP 240

Query: 241 NIDRVGDMQSDALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKM 300
           NIDRVGDMQSDA+FILLVEKDAAY+RLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKM
Sbjct: 241 NIDRVGDMQSDAMFILLVEKDAAYMRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKM 300

Query: 301 ELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQ 360
           ELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQ
Sbjct: 301 ELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQ 360

Query: 361 CRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELTLMVKTKQKAEIQALSSFGFQYLSEVYL 420
           CRLPMTEQDIKTGKD+LEEDFVKKNPGWVEEL LMVKTKQKAEIQALSSFGFQYLSEVYL
Sbjct: 361 CRLPMTEQDIKTGKDMLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYL 420

[Close]

BLAST of Moc01g21840 vs. ExPASy Swiss-Prot
Match: A2XFC1 (DNA topoisomerase 6 subunit A3 OS=Oryza sativa subsp. indica OX=39946 GN=TOP6A3 PE=1 SV=2)

HSP 1 Score: 571.6 bits (1472), Expect = 7.2e-162
Identity = 288/408 (70.59%), Postives = 347/408 (85.05%), Query Frame = 0


Query: 23  KNRLKPDSAILQIIKEFGDC--------STAPSSSSSKTL--EDLGLSSTCREVTDLSLS 82
           +++L+PD++IL  ++             S++ SSS+SK L  ED   +S    V D   +
Sbjct: 36  RSKLRPDASILATLRSLASACSKSKPAGSSSSSSSASKALAAEDDPAASYI-VVADQDSA 95

Query: 83  SVQSTIESLILKIARSILSGNGFAFDVPSRSAANQLYVPELDRIVLKDKTALRPYANIST 142
           SV S I  L+L  ARSILSG GF+F VPSR+A+NQ+Y+P+LDRIVL  + + RP+AN++T
Sbjct: 96  SVTSRINRLVLAAARSILSGRGFSFAVPSRAASNQVYLPDLDRIVLVRRESARPFANVAT 155

Query: 143 VRKSTITTRILQLVHQLCMKNIHVTKRDLFYTDVKLFQDQTQSDSVLDDVSCILGCTRSS 202
            RK+TIT R+L LVH +  + IHVTKRDLFYTDVKLF DQ QSD+VLDDVSC+LGCTRSS
Sbjct: 156 ARKATITARVLSLVHAVLRRGIHVTKRDLFYTDVKLFGDQAQSDAVLDDVSCMLGCTRSS 215

Query: 203 LNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDALFILLVEKDA 262
           L+V+A+EKGVVVGRL F+D+GD IDCT+MG+GGKAIPPNIDRV  ++SDALFILLVEKDA
Sbjct: 216 LHVVASEKGVVVGRLTFADDGDRIDCTRMGVGGKAIPPNIDRVSGIESDALFILLVEKDA 275

Query: 263 AYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSV 322
           A++RLAEDRFYNRFPCII+TAKGQPDVATRLFLR++K+ELKLPVLALVDSDPYGLKILSV
Sbjct: 276 AFMRLAEDRFYNRFPCIILTAKGQPDVATRLFLRRLKVELKLPVLALVDSDPYGLKILSV 335

Query: 323 YGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFV 382
           Y CGSKNMSYDSANLTTPDIKWLG+RPSDLDKY++PEQCRLPMT+ DIK GK+LLEEDFV
Sbjct: 336 YMCGSKNMSYDSANLTTPDIKWLGVRPSDLDKYRVPEQCRLPMTDHDIKVGKELLEEDFV 395

Query: 383 KKNPGWVEELTLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 421
           K+N GWV+EL  M++T+QKAEIQALSSFGFQYL+EVYLPLKLQQ+DW+
Sbjct: 396 KQNEGWVKELETMLRTRQKAEIQALSSFGFQYLTEVYLPLKLQQQDWI 442

[Close]

BLAST of Moc01g21840 vs. ExPASy Swiss-Prot
Match: Q0DSV9 (Topoisomerase 6 subunit A3 OS=Oryza sativa subsp. japonica OX=39947 GN=SPO11-3 PE=2 SV=2)

HSP 1 Score: 571.6 bits (1472), Expect = 7.2e-162
Identity = 288/408 (70.59%), Postives = 347/408 (85.05%), Query Frame = 0


Query: 23  KNRLKPDSAILQIIKEFGDC--------STAPSSSSSKTL--EDLGLSSTCREVTDLSLS 82
           +++L+PD++IL  ++             S++ SSS+SK L  ED   +S    V D   +
Sbjct: 36  RSKLRPDASILATLRSLASACSKSKPAGSSSSSSSASKALAAEDDPAASYI-VVADQDSA 95

Query: 83  SVQSTIESLILKIARSILSGNGFAFDVPSRSAANQLYVPELDRIVLKDKTALRPYANIST 142
           SV S I  L+L  ARSILSG GF+F VPSR+A+NQ+Y+P+LDRIVL  + + RP+AN++T
Sbjct: 96  SVTSRINRLVLAAARSILSGRGFSFAVPSRAASNQVYLPDLDRIVLVRRESARPFANVAT 155

Query: 143 VRKSTITTRILQLVHQLCMKNIHVTKRDLFYTDVKLFQDQTQSDSVLDDVSCILGCTRSS 202
            RK+TIT R+L LVH +  + IHVTKRDLFYTDVKLF DQ QSD+VLDDVSC+LGCTRSS
Sbjct: 156 ARKATITARVLSLVHAVLRRGIHVTKRDLFYTDVKLFGDQAQSDAVLDDVSCMLGCTRSS 215

Query: 203 LNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDALFILLVEKDA 262
           L+V+A+EKGVVVGRL F+D+GD IDCT+MG+GGKAIPPNIDRV  ++SDALFILLVEKDA
Sbjct: 216 LHVVASEKGVVVGRLTFADDGDRIDCTRMGVGGKAIPPNIDRVSGIESDALFILLVEKDA 275

Query: 263 AYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSV 322
           A++RLAEDRFYNRFPCII+TAKGQPDVATRLFLR++K+ELKLPVLALVDSDPYGLKILSV
Sbjct: 276 AFMRLAEDRFYNRFPCIILTAKGQPDVATRLFLRRLKVELKLPVLALVDSDPYGLKILSV 335

Query: 323 YGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFV 382
           Y CGSKNMSYDSANLTTPDIKWLG+RPSDLDKY++PEQCRLPMT+ DIK GK+LLEEDFV
Sbjct: 336 YMCGSKNMSYDSANLTTPDIKWLGVRPSDLDKYRVPEQCRLPMTDHDIKVGKELLEEDFV 395

Query: 383 KKNPGWVEELTLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 421
           K+N GWV+EL  M++T+QKAEIQALSSFGFQYL+EVYLPLKLQQ+DW+
Sbjct: 396 KQNEGWVKELETMLRTRQKAEIQALSSFGFQYLTEVYLPLKLQQQDWI 442

[Close]

BLAST of Moc01g21840 vs. ExPASy Swiss-Prot
Match: Q9Y5K1 (Meiotic recombination protein SPO11 OS=Homo sapiens OX=9606 GN=SPO11 PE=1 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 4.8e-65
Identity = 129/355 (36.34%), Postives = 220/355 (61.97%), Query Frame = 0


Query: 70  SLSSVQSTIESLILKIARSILSGNGFAFDVPSRSAANQLYVPELDRIVLKDKTALRPYAN 129
           S S V ++IE++I  I  S+      AF + +RS+   +   +   + +      R   +
Sbjct: 43  SSSEVLASIENIIQDIITSLARNEAPAFTIDNRSSWENIKFEDSVGLQMVSHCTTRKIKS 102

Query: 130 IS--TVRKSTITTRILQLVHQLCMKNIHVTKRDLFYTDVKLFQDQTQSDSVLDDVSCILG 189
            S  + +K ++  +IL ++++L   N + TKRD++YTD +LF +QT  D++++D+SC+L 
Sbjct: 103 DSPKSAQKFSLILKILSMIYKLVQSNTYATKRDIYYTDSQLFGNQTVVDNIINDISCMLK 162

Query: 190 CTRSSLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDALFIL 249
            +R SL++++  KG++ G L +  ++G  ++CT  G    A+P NI  + ++ +DA F+L
Sbjct: 163 VSRRSLHILSTSKGLIAGNLRYIEEDGTKVNCT-CGATAVAVPSNIQGIRNLVTDAKFVL 222

Query: 250 LVEKDAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPY 309
           +VEKDA + RL +D F N+  PCI++T KG PD+ TRL ++K+     +PV  LVD+DP+
Sbjct: 223 IVEKDATFQRLLDDNFCNKLSPCIMITGKGVPDLNTRLLVKKLWDTFHVPVFTLVDADPH 282

Query: 310 GLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKD 369
           G++I+ +Y  GS +MS+++ +LT P I+WLG+ PSDL +  +P+   +P+T++D      
Sbjct: 283 GIEIMCIYKYGSMSMSFEAHHLTVPAIRWLGLLPSDLKRLNVPKDSLIPLTKRDQMKLDS 342

Query: 370 LLEEDFVKKNPGWVEELTLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 421
           +L   +V   P W +E+ +M  +K KAEIQAL+     YLS VYLP KL+   W+
Sbjct: 343 ILRRPYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLKFGGWI 396

[Close]

BLAST of Moc01g21840 vs. ExPASy Swiss-Prot
Match: Q9WTK8 (Meiotic recombination protein SPO11 OS=Mus musculus OX=10090 GN=Spo11 PE=1 SV=2)

HSP 1 Score: 248.8 bits (634), Expect = 1.1e-64
Identity = 135/363 (37.19%), Postives = 214/363 (58.95%), Query Frame = 0


Query: 70  SLSSVQSTIESLILKIARSILSGNGFAFDVPSRSAANQLYVPELDRIVLKDKTALRPYAN 129
           S S V + IE++I  I +S+      AF + +RS+         + I+  D   LR    
Sbjct: 43  SSSEVLTAIENIIQDIIKSLARNEVPAFTIDNRSS--------WENIMFDDSVGLRMIPQ 102

Query: 130 IST----------VRKSTITTRILQLVHQLCMKNIHVTKRDLFYTDVKLFQDQTQSDSVL 189
            +T          V+K  +  ++L ++++L   + + TKRD++YTD +LF +Q   DS +
Sbjct: 103 CTTRKIRSDSPKSVKKFALILKVLSMIYKLIQSDTYATKRDIYYTDSQLFGNQAAVDSAI 162

Query: 190 DDVSCILGCTRSSLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDM 249
           DD+SC+L   R SL+V++  KG++ G L +  ++G  + CT       A+P NI  +  +
Sbjct: 163 DDISCMLKVPRRSLHVLSTSKGLIAGNLRYMEEDGTRVQCT-CSATATAVPTNIQGMQHL 222

Query: 250 QSDALFILLVEKDAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVL 309
            +DA F+L+VEKDA + RL +D F +R  PCI+VT KG PD+ TRL ++K+     +PV 
Sbjct: 223 ITDAKFLLIVEKDATFQRLLDDNFCSRMSPCIMVTGKGVPDLNTRLLVKKLWDTFHIPVF 282

Query: 310 ALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTE 369
            LVD+DPYG++I+ +Y  GS +MS+++ NLT P I+WLG+ PSD+ +  IP+   +P+T+
Sbjct: 283 TLVDADPYGIEIMCIYKYGSMSMSFEAHNLTIPTIRWLGLLPSDIQRLNIPKDSLIPLTK 342

Query: 370 QDIKTGKDLLEEDFVKKNPGWVEELTLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQK 421
            D      +L+  ++   P W +EL +M  +K KAEIQAL+     YLS VYLP KL+  
Sbjct: 343 HDQMKLDSILKRPYITYQPLWKKELEMMADSKMKAEIQALTLLSSDYLSRVYLPNKLRFG 396

[Close]

BLAST of Moc01g21840 vs. ExPASy TrEMBL
Match: A0A6J1CR74 (DNA topoisomerase 6 subunit A OS=Momordica charantia OX=3673 GN=LOC111013584 PE=3 SV=1)

HSP 1 Score: 820.5 bits (2118), Expect = 3.3e-234
Identity = 420/420 (100.00%), Postives = 420/420 (100.00%), Query Frame = 0


Query: 1   MADKRKRRRSELNPDDEAQLPFKNRLKPDSAILQIIKEFGDCSTAPSSSSSKTLEDLGLS 60
           MADKRKRRRSELNPDDEAQLPFKNRLKPDSAILQIIKEFGDCSTAPSSSSSKTLEDLGLS
Sbjct: 1   MADKRKRRRSELNPDDEAQLPFKNRLKPDSAILQIIKEFGDCSTAPSSSSSKTLEDLGLS 60

Query: 61  STCREVTDLSLSSVQSTIESLILKIARSILSGNGFAFDVPSRSAANQLYVPELDRIVLKD 120
           STCREVTDLSLSSVQSTIESLILKIARSILSGNGFAFDVPSRSAANQLYVPELDRIVLKD
Sbjct: 61  STCREVTDLSLSSVQSTIESLILKIARSILSGNGFAFDVPSRSAANQLYVPELDRIVLKD 120

Query: 121 KTALRPYANISTVRKSTITTRILQLVHQLCMKNIHVTKRDLFYTDVKLFQDQTQSDSVLD 180
           KTALRPYANISTVRKSTITTRILQLVHQLCMKNIHVTKRDLFYTDVKLFQDQTQSDSVLD
Sbjct: 121 KTALRPYANISTVRKSTITTRILQLVHQLCMKNIHVTKRDLFYTDVKLFQDQTQSDSVLD 180

Query: 181 DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 240
           DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS
Sbjct: 181 DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 240

Query: 241 DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 300
           DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV
Sbjct: 241 DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 300

Query: 301 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI 360
           DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI
Sbjct: 301 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI 360

Query: 361 KTGKDLLEEDFVKKNPGWVEELTLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 420
           KTGKDLLEEDFVKKNPGWVEELTLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL
Sbjct: 361 KTGKDLLEEDFVKKNPGWVEELTLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 420

[Close]

BLAST of Moc01g21840 vs. ExPASy TrEMBL
Match: A0A6J1IM23 (DNA topoisomerase 6 subunit A OS=Cucurbita maxima OX=3661 GN=LOC111477696 PE=3 SV=1)

HSP 1 Score: 798.1 bits (2060), Expect = 1.7e-227
Identity = 408/420 (97.14%), Postives = 413/420 (98.33%), Query Frame = 0


Query: 1   MADKRKRRRSELNPDDEAQLPFKNRLKPDSAILQIIKEFGDCSTAPSSSSSKTLEDLGLS 60
           MADKRKRRRSELNPD EAQLPFKN LK DS ILQI+KEF DCSTAPSSSSSKTL+DLGLS
Sbjct: 1   MADKRKRRRSELNPDVEAQLPFKNSLKSDSIILQILKEFSDCSTAPSSSSSKTLDDLGLS 60

Query: 61  STCREVTDLSLSSVQSTIESLILKIARSILSGNGFAFDVPSRSAANQLYVPELDRIVLKD 120
           S+CREVTDLSLSSVQSTIE LILKIARSILSGNGFAFDVPSRSAANQLYVPELDRIVLKD
Sbjct: 61  SSCREVTDLSLSSVQSTIEDLILKIARSILSGNGFAFDVPSRSAANQLYVPELDRIVLKD 120

Query: 121 KTALRPYANISTVRKSTITTRILQLVHQLCMKNIHVTKRDLFYTDVKLFQDQTQSDSVLD 180
           KTA+RPYANISTVRKSTITTRILQLVHQLC+KNIHVTKRDLFYTDVKLFQDQTQSDSVLD
Sbjct: 121 KTAIRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLD 180

Query: 181 DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 240
           DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS
Sbjct: 181 DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 240

Query: 241 DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 300
           DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV
Sbjct: 241 DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 300

Query: 301 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI 360
           DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKY IPEQCRLPMTEQDI
Sbjct: 301 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYNIPEQCRLPMTEQDI 360

Query: 361 KTGKDLLEEDFVKKNPGWVEELTLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 420
           KTGKDLLEEDFVKKNPGWVEELTLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL
Sbjct: 361 KTGKDLLEEDFVKKNPGWVEELTLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 420

[Close]

BLAST of Moc01g21840 vs. ExPASy TrEMBL
Match: A0A6J1GGP2 (DNA topoisomerase 6 subunit A OS=Cucurbita moschata OX=3662 GN=LOC111453780 PE=3 SV=1)

HSP 1 Score: 797.3 bits (2058), Expect = 3.0e-227
Identity = 407/420 (96.90%), Postives = 413/420 (98.33%), Query Frame = 0


Query: 1   MADKRKRRRSELNPDDEAQLPFKNRLKPDSAILQIIKEFGDCSTAPSSSSSKTLEDLGLS 60
           MADKRKRRRSELNPD EAQLPFKN LK DS ILQI+KEF DCSTAPSSSSSKTL+DLGLS
Sbjct: 1   MADKRKRRRSELNPDGEAQLPFKNSLKSDSIILQILKEFSDCSTAPSSSSSKTLDDLGLS 60

Query: 61  STCREVTDLSLSSVQSTIESLILKIARSILSGNGFAFDVPSRSAANQLYVPELDRIVLKD 120
           S+CREVTDLSLSSVQSTIE LILKIARSILSGNGFAFDVPSRSAANQLYVPELDRIVLKD
Sbjct: 61  SSCREVTDLSLSSVQSTIEDLILKIARSILSGNGFAFDVPSRSAANQLYVPELDRIVLKD 120

Query: 121 KTALRPYANISTVRKSTITTRILQLVHQLCMKNIHVTKRDLFYTDVKLFQDQTQSDSVLD 180
           KTA+RPYANISTVRKSTITTRILQLVHQLC+KNIHVTKRDLFYTDVKLFQDQTQSDSVLD
Sbjct: 121 KTAIRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLD 180

Query: 181 DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 240
           DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS
Sbjct: 181 DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 240

Query: 241 DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 300
           DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV
Sbjct: 241 DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 300

Query: 301 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI 360
           DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKY IPEQCRLPMTEQDI
Sbjct: 301 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYNIPEQCRLPMTEQDI 360

Query: 361 KTGKDLLEEDFVKKNPGWVEELTLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 420
           KTGKDLLEEDFVKKNPGWVEEL+LMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL
Sbjct: 361 KTGKDLLEEDFVKKNPGWVEELSLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 420

[Close]

BLAST of Moc01g21840 vs. ExPASy TrEMBL
Match: A0A0A0L216 (DNA topoisomerase 6 subunit A OS=Cucumis sativus OX=3659 GN=TOP6A PE=3 SV=1)

HSP 1 Score: 790.8 bits (2041), Expect = 2.8e-225
Identity = 404/420 (96.19%), Postives = 413/420 (98.33%), Query Frame = 0


Query: 1   MADKRKRRRSELNPDDEAQLPFKNRLKPDSAILQIIKEFGDCSTAPSSSSSKTLEDLGLS 60
           MADKRKRRRSELN +DEAQLPFKN+LKPDS ILQI+KE  D STA SSSSSKTL+DLGLS
Sbjct: 1   MADKRKRRRSELNSEDEAQLPFKNKLKPDSFILQILKELSDASTASSSSSSKTLDDLGLS 60

Query: 61  STCREVTDLSLSSVQSTIESLILKIARSILSGNGFAFDVPSRSAANQLYVPELDRIVLKD 120
           S+CREVTDLSLSSVQ+TIES+ILKIARSILSGNGFAFDVPSRS ANQLYVPELDRIVLKD
Sbjct: 61  SSCREVTDLSLSSVQATIESVILKIARSILSGNGFAFDVPSRSGANQLYVPELDRIVLKD 120

Query: 121 KTALRPYANISTVRKSTITTRILQLVHQLCMKNIHVTKRDLFYTDVKLFQDQTQSDSVLD 180
           KTALRPYANISTVRKSTITTRILQLVHQLC+KNIHVTKRDLFYTDVKLFQDQTQSDSVLD
Sbjct: 121 KTALRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLD 180

Query: 181 DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 240
           DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS
Sbjct: 181 DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 240

Query: 241 DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 300
           DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV
Sbjct: 241 DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 300

Query: 301 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI 360
           DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI
Sbjct: 301 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI 360

Query: 361 KTGKDLLEEDFVKKNPGWVEELTLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 420
           KTGKDLLEEDFVKKNPGWVEEL+LMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL
Sbjct: 361 KTGKDLLEEDFVKKNPGWVEELSLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 420

[Close]

BLAST of Moc01g21840 vs. ExPASy TrEMBL
Match: A0A5A7TWM5 (DNA topoisomerase 6 subunit A OS=Cucumis melo var. makuwa OX=1194695 GN=TOP6A PE=3 SV=1)

HSP 1 Score: 790.0 bits (2039), Expect = 4.8e-225
Identity = 404/420 (96.19%), Postives = 412/420 (98.10%), Query Frame = 0


Query: 1   MADKRKRRRSELNPDDEAQLPFKNRLKPDSAILQIIKEFGDCSTAPSSSSSKTLEDLGLS 60
           MADKRKRRRSELNP+DEAQLPFKN+LK DS ILQI+KE  D S   SSSSSKTL+DLGLS
Sbjct: 1   MADKRKRRRSELNPEDEAQLPFKNKLKADSFILQILKELSDSSAVSSSSSSKTLDDLGLS 60

Query: 61  STCREVTDLSLSSVQSTIESLILKIARSILSGNGFAFDVPSRSAANQLYVPELDRIVLKD 120
           S+CREVTDLSLSSVQ+TIES+ILKIARSILSGNGFAFDVPSRSAANQLYVPELDRIVLKD
Sbjct: 61  SSCREVTDLSLSSVQATIESVILKIARSILSGNGFAFDVPSRSAANQLYVPELDRIVLKD 120

Query: 121 KTALRPYANISTVRKSTITTRILQLVHQLCMKNIHVTKRDLFYTDVKLFQDQTQSDSVLD 180
           KTALRPYANISTVRKSTITTRILQLVHQLC+KNIHVTKRDLFYTDVKLFQDQTQSDSVLD
Sbjct: 121 KTALRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLD 180

Query: 181 DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 240
           DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS
Sbjct: 181 DVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 240

Query: 241 DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 300
           DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV
Sbjct: 241 DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 300

Query: 301 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI 360
           DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI
Sbjct: 301 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI 360

Query: 361 KTGKDLLEEDFVKKNPGWVEELTLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 420
           KTGKDLLEEDFVKKNPGWVEELTLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL
Sbjct: 361 KTGKDLLEEDFVKKNPGWVEELTLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 420

[Close]

BLAST of Moc01g21840 vs. TAIR 10
Match: AT5G02820.1 (Spo11/DNA topoisomerase VI, subunit A protein )

HSP 1 Score: 701.0 bits (1808), Expect = 5.6e-202
Identity = 361/430 (83.95%), Postives = 397/430 (92.33%), Query Frame = 0


Query: 1   MADKRKRRRSELNPDDEA-QLPFKNRLKPDSAILQIIKEFGDCST-------APSSSSSK 60
           MADK+KR+RS+   DDEA +LPFK+ L+ D  I +++K +   S          SSSSSK
Sbjct: 1   MADKKKRKRSK---DDEAEELPFKSILESDDVITELLKSYISSSIKAAAGAGGASSSSSK 60

Query: 61  --TLEDLGLSSTCREVTDLSLSSVQSTIESLILKIARSILSGNGFAFDVPSRSAANQLYV 120
             TL DL LSS+CREV DLSLSSVQ+ IE++I++IARSIL+G+GF+F VPSR+A+NQLYV
Sbjct: 61  PLTLADLSLSSSCREVADLSLSSVQTEIETVIVQIARSILAGDGFSFSVPSRAASNQLYV 120

Query: 121 PELDRIVLKDKTALRPYANISTVRKSTITTRILQLVHQLCMKNIHVTKRDLFYTDVKLFQ 180
           PELDRIVLKDK+ LRP+A++S+VRK+TITTRIL L+HQLC++NIHVTKRDLFYTDVKLFQ
Sbjct: 121 PELDRIVLKDKSTLRPFASVSSVRKTTITTRILALIHQLCLRNIHVTKRDLFYTDVKLFQ 180

Query: 181 DQTQSDSVLDDVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPP 240
           DQTQSD+VLDDVSC+LGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPP
Sbjct: 181 DQTQSDAVLDDVSCMLGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPP 240

Query: 241 NIDRVGDMQSDALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKM 300
           NIDRVGDMQSDA+FILLVEKDAAY+RLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKM
Sbjct: 241 NIDRVGDMQSDAMFILLVEKDAAYMRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKM 300

Query: 301 ELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQ 360
           ELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQ
Sbjct: 301 ELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQ 360

Query: 361 CRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELTLMVKTKQKAEIQALSSFGFQYLSEVYL 420
           CRLPMTEQDIKTGKD+LEEDFVKKNPGWVEEL LMVKTKQKAEIQALSSFGFQYLSEVYL
Sbjct: 361 CRLPMTEQDIKTGKDMLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYL 420

[Close]

BLAST of Moc01g21840 vs. TAIR 10
Match: AT3G13170.1 (Spo11/DNA topoisomerase VI, subunit A protein )

HSP 1 Score: 221.9 bits (564), Expect = 9.9e-58
Identity = 124/314 (39.49%), Postives = 183/314 (58.28%), Query Frame = 0


Query: 111 PELDRIVLKDKTALRPYANISTVRKSTIT------TRILQLVHQLCMKNIHVTKRDLFYT 170
           PE D +   DK   +    I T++K   T       R+L +V QL  +N H +KRD++Y 
Sbjct: 48  PEADCLCSSDKPKGQ---EIFTLKKEPQTYRIDMLLRVLLIVQQLLQENRHASKRDIYYM 107

Query: 171 DVKLFQDQTQSDSVLDDVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMG 230
               F+ Q+  D  + D+  +  C+R +LNV++   G+V+G L F + G   DC      
Sbjct: 108 HPSAFKAQSIVDRAIGDICILFQCSRYNLNVVSVGNGLVMGWLKFREAGRKFDCLNSLNT 167

Query: 231 GKAIPPNIDRVGDMQSDALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLF 290
              +P  ++ V D+ S A +IL+VEK+  + RLA D F     CI++T +G PDV+TR F
Sbjct: 168 AYPVPVLVEEVEDIVSLAEYILVVEKETVFQRLANDMFCKTNRCIVITGRGYPDVSTRRF 227

Query: 291 LRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDK 350
           LR +  +L LPV  LVD DPYG +IL+ Y  GS  M+YD  +L  PD+KWLG  PSD + 
Sbjct: 228 LRLLMEKLHLPVHCLVDCDPYGFEILATYRFGSMQMAYDIESLRAPDMKWLGAFPSDSEV 287

Query: 351 YKIPEQCRLPMTEQDIKTGKDLLEEDFVKKN-PGWVEELTLMVKTKQKAEIQALSSFGFQ 410
           Y +P+QC LP+TE+D K  + +L   ++K+  P W  EL  M+K   K EI+ALS     
Sbjct: 288 YSVPKQCLLPLTEEDKKRTEAMLLRCYLKREMPQWRLELETMLKRGVKFEIEALSVHSLS 347

Query: 411 YLSEVYLPLKLQQK 418
           +LSEVY+P K++++
Sbjct: 348 FLSEVYIPSKIRRE 358

[Close]

BLAST of Moc01g21840 vs. TAIR 10
Match: AT1G63990.1 (sporulation 11-2 )

HSP 1 Score: 189.9 bits (481), Expect = 4.2e-48
Identity = 117/360 (32.50%), Postives = 200/360 (55.56%), Query Frame = 0


Query: 75  QSTIESLILKIARSILSGNGFAFDVP------SRSAANQLYVPELDRIVLKDKTALRPYA 134
           ++ IE  +L + R + S +    D+       S S  N+  + ++  I L          
Sbjct: 30  RARIEVSVLNLLRILNSPDPAISDLSLINRKRSNSCINKGILTDVSYIFLSTSFTKSSLT 89

Query: 135 NISTVRKSTITTRILQLVHQLCMKNIHVTKRDLFY----TDVKLFQDQTQSDSVLDDVSC 194
           N  T +      +++++  Q+ ++   VT+R+LFY         F  Q + +  + DV  
Sbjct: 90  NAKTAKAFVRVWKVMEICFQILLQEKRVTQRELFYKLLCDSPDYFSSQIEVNRSVQDVVA 149

Query: 195 ILGCTRSSLNVIAAEKGVVVGRLIFSDNG-DMIDCTKMGMGGKAIPPNIDRVGD--MQSD 254
           +L C+R SL ++A+ +G+V GRL   + G + +DC+  G  G AI  +++ + +  M++D
Sbjct: 150 LLRCSRYSLGIMASSRGLVAGRLFLQEPGKEAVDCSACGSSGFAITGDLNLLDNTIMRTD 209

Query: 255 ALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMEL-KLPVLALV 314
           A +I++VEK A + RL EDR +N  PC+ +TAKG PD+ATR FL +M      LP+L LV
Sbjct: 210 ARYIIIVEKHAIFHRLVEDRVFNHIPCVFITAKGYPDIATRFFLHRMSTTFPDLPILVLV 269

Query: 315 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI 374
           D +P GL IL  +  GS  M  ++      ++KW+G+R  DL+   IPE+  +P+  +D 
Sbjct: 270 DWNPAGLAILCTFKFGSIGMGLEAYRYAC-NVKWIGLRGDDLN--LIPEESLVPLKPKDS 329

Query: 375 KTGKDLLEEDFVKKNPGWVEELTLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 421
           +  K LL    +++N  ++EEL+LMV+T ++AEI+AL   G+ YL + Y+  K+ Q  ++
Sbjct: 330 QIAKSLLSSKILQEN--YIEELSLMVQTGKRAEIEALYCHGYNYLGK-YIATKIVQGKYI 383

The following BLAST results are available for this feature:

BLAST of Moc01g21840 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143741.1	6.8e-234	100.00	DNA topoisomerase 6 subunit A [Momordica charantia]	[more]
XP_022977345.1	3.6e-227	97.14	DNA topoisomerase 6 subunit A [Cucurbita maxima]	[more]
XP_023544835.1	6.2e-227	96.90	DNA topoisomerase 6 subunit A [Cucurbita pepo subsp. pepo] >XP_023544836.1 DNA t...	[more]
XP_022950775.1	6.2e-227	96.90	DNA topoisomerase 6 subunit A [Cucurbita moschata] >KAG6603699.1 DNA topoisomera...	[more]
XP_038881252.1	1.5e-225	96.90	DNA topoisomerase 6 subunit A [Benincasa hispida]	[more]

BLAST of Moc01g21840 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LZ03	7.9e-201	83.95	DNA topoisomerase 6 subunit A OS=Arabidopsis thaliana OX=3702 GN=TOP6A PE=1 SV=1	[more]
A2XFC1	7.2e-162	70.59	DNA topoisomerase 6 subunit A3 OS=Oryza sativa subsp. indica OX=39946 GN=TOP6A3 ...	[more]
Q0DSV9	7.2e-162	70.59	Topoisomerase 6 subunit A3 OS=Oryza sativa subsp. japonica OX=39947 GN=SPO11-3 P...	[more]
Q9Y5K1	4.8e-65	36.34	Meiotic recombination protein SPO11 OS=Homo sapiens OX=9606 GN=SPO11 PE=1 SV=1	[more]
Q9WTK8	1.1e-64	37.19	Meiotic recombination protein SPO11 OS=Mus musculus OX=10090 GN=Spo11 PE=1 SV=2	[more]

BLAST of Moc01g21840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CR74	3.3e-234	100.00	DNA topoisomerase 6 subunit A OS=Momordica charantia OX=3673 GN=LOC111013584 PE=...	[more]
A0A6J1IM23	1.7e-227	97.14	DNA topoisomerase 6 subunit A OS=Cucurbita maxima OX=3661 GN=LOC111477696 PE=3 S...	[more]
A0A6J1GGP2	3.0e-227	96.90	DNA topoisomerase 6 subunit A OS=Cucurbita moschata OX=3662 GN=LOC111453780 PE=3...	[more]
A0A0A0L216	2.8e-225	96.19	DNA topoisomerase 6 subunit A OS=Cucumis sativus OX=3659 GN=TOP6A PE=3 SV=1	[more]
A0A5A7TWM5	4.8e-225	96.19	DNA topoisomerase 6 subunit A OS=Cucumis melo var. makuwa OX=1194695 GN=TOP6A PE...	[more]

BLAST of Moc01g21840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G02820.1	5.6e-202	83.95	Spo11/DNA topoisomerase VI, subunit A protein	[more]
AT3G13170.1	9.9e-58	39.49	Spo11/DNA topoisomerase VI, subunit A protein	[more]
AT1G63990.1	4.2e-48	32.50	sporulation 11-2	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002815	Spo11/DNA topoisomerase VI subunit A	PRINTS	PR01550	TOP6AFAMILY	coord: 269..290 score: 49.43 coord: 158..169 score: 53.65 coord: 172..189 score: 39.24 coord: 301..317 score: 55.15 coord: 190..205 score: 44.92 coord: 245..262 score: 51.04
IPR002815	Spo11/DNA topoisomerase VI subunit A	PANTHER	PTHR10848	MEIOTIC RECOMBINATION PROTEIN SPO11	coord: 46..420
IPR004085	DNA topoisomerase VI, subunit A	PRINTS	PR01552	TPISMRASE6A	coord: 391..414 score: 42.19 coord: 166..183 score: 32.64 coord: 275..295 score: 47.62 coord: 100..120 score: 30.95 coord: 219..237 score: 34.87
IPR004085	DNA topoisomerase VI, subunit A	HAMAP	MF_00132	Top6A	coord: 68..420 score: 36.490993
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 60..198 e-value: 4.2E-39 score: 135.7
None	No IPR available	GENE3D	3.40.1360.10		coord: 199..420 e-value: 3.5E-78 score: 264.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	PANTHER	PTHR10848:SF4	DNA TOPOISOMERASE 6 SUBUNIT A	coord: 46..420
IPR013049	Spo11/DNA topoisomerase VI, subunit A, N-terminal	PFAM	PF04406	TP6A_N	coord: 134..195 e-value: 1.6E-20 score: 72.8
IPR034136	Topoisomerase 6 subunit A/Spo11, TOPRIM domain	CDD	cd00223	TOPRIM_TopoIIB_SPO	coord: 244..404 e-value: 1.05868E-72 score: 223.286
IPR036078	Spo11/DNA topoisomerase VI subunit A superfamily	SUPERFAMILY	56726	DNA topoisomerase IV, alpha subunit	coord: 134..420

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc01g21840.1	Moc01g21840.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006265	DNA topological change
biological_process	GO:0042138	meiotic DNA double-strand break formation
biological_process	GO:0000706	meiotic DNA double-strand break processing
biological_process	GO:0007131	reciprocal meiotic recombination
biological_process	GO:0006259	DNA metabolic process
cellular_component	GO:0009330	DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex
cellular_component	GO:0000228	nuclear chromosome
cellular_component	GO:0005694	chromosome
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003918	DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
molecular_function	GO:0000287	magnesium ion binding
molecular_function	GO:0003824	catalytic activity