Moc01g20840 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc01g20840
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Unknown protein
Location	chr1: 14553468 .. 14554107 (+)
RNA-Seq Expression	Moc01g20840
Synteny	Moc01g20840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTGCCACCAACTGCTATCGACATCCACCGACAGACCGTTTCAGATATGGAGTTTGCTCCAGATCTGAAAGCTTCGAAGTCAAATATGGAACGAACGTTTAGCTGGTGACGTGGTAAACGACAAGTTGGCCGTCGGTGTAATTGGTGTTGGCGACGACGGCGTCGACGACGCTGGTGGTAAAATTGACCTGAGACCCAGAAGTGGTGACATTCAGGGGAAACTGGCGGGCGTTGCTGTTTCCGGCCTGGGTACGAAGAGGGTTGCTGACGGAATGAAATTGGGACATGGAAACGAAATTTGGGAGGACATGGAACTGAACCAGCTCAACTTTCTACTGGTCGGAGAGGGAATTGAGAGTTCCAGGTTTCAGATTGGCGAAGGCGTTGTCTGGAGGAGTAAACAGAGTGAGGCCCTGCCCTTGGTTGGAATTGTTGAGCTGATTATTGATTTGGTCGCTCTGTTGTACGCTTTTGAGGAGTTTATTGAAGGTTGTGAACTGGTCGGCCTTTACGAGGATGACCGTGATGTTGGTCGGACCGGCGGGGCCCGGCGGTTGAGTCGACAGAGCAGAAACAAAGGAACAGAGGAAGGCCAGAAAGGAGGGAATGGGGAGGAGCTTCTTCATGATTGGTTTTGA

mRNA sequence

ATGCTGCCACCAACTGCTATCGACATCCACCGACAGACCTTGGCCGTCGGTGTAATTGGTGTTGGCGACGACGGCGTCGACGACGCTGGTGGTAAAATTGACCTGAGACCCAGAAGTGGTGACATTCAGGGGAAACTGGCGGGCGTTGCTGTTTCCGGCCTGGGTACGAAGAGGGTTGCTGACGGAATGAAATTGGGACATGGAAACGAAATTTGGGAGGACATGGAACTGAACCAGCTCAACTTTCTACTGGTCGGAGAGGGAATTGAGAGTTCCAGGTTTCAGATTGGCGAAGGCGTTGTCTGGAGGAGTAAACAGAGTGAGGCCCTGCCCTTGGTTGGAATTGTTGAGCTGATTATTGATTTGGTCGCTCTGTTGTACGCTTTTGAGGAGTTTATTGAAGGTTGTGAACTGGTCGGCCTTTACGAGGATGACCGTGATGTTGGTCGGACCGGCGGGGCCCGGCGGTTGAGTCGACAGAGCAGAAACAAAGGAACAGAGGAAGGCCAGAAAGGAGGGAATGGGGAGGAGCTTCTTCATGATTGGTTTTGA

Coding sequence (CDS)

ATGCTGCCACCAACTGCTATCGACATCCACCGACAGACCTTGGCCGTCGGTGTAATTGGTGTTGGCGACGACGGCGTCGACGACGCTGGTGGTAAAATTGACCTGAGACCCAGAAGTGGTGACATTCAGGGGAAACTGGCGGGCGTTGCTGTTTCCGGCCTGGGTACGAAGAGGGTTGCTGACGGAATGAAATTGGGACATGGAAACGAAATTTGGGAGGACATGGAACTGAACCAGCTCAACTTTCTACTGGTCGGAGAGGGAATTGAGAGTTCCAGGTTTCAGATTGGCGAAGGCGTTGTCTGGAGGAGTAAACAGAGTGAGGCCCTGCCCTTGGTTGGAATTGTTGAGCTGATTATTGATTTGGTCGCTCTGTTGTACGCTTTTGAGGAGTTTATTGAAGGTTGTGAACTGGTCGGCCTTTACGAGGATGACCGTGATGTTGGTCGGACCGGCGGGGCCCGGCGGTTGAGTCGACAGAGCAGAAACAAAGGAACAGAGGAAGGCCAGAAAGGAGGGAATGGGGAGGAGCTTCTTCATGATTGGTTTTGA

Protein sequence

MLPPTAIDIHRQTLAVGVIGVGDDGVDDAGGKIDLRPRSGDIQGKLAGVAVSGLGTKRVADGMKLGHGNEIWEDMELNQLNFLLVGEGIESSRFQIGEGVVWRSKQSEALPLVGIVELIIDLVALLYAFEEFIEGCELVGLYEDDRDVGRTGGARRLSRQSRNKGTEEGQKGGNGEELLHDWF

Homology

[Close]

BLAST of Moc01g20840 vs. NCBI nr
Match: KAG6595261.1 (DnaJ protein P58IPK-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 94.4 bits (233), Expect = 1.1e-15
Identity = 54/89 (60.67%), Postives = 64/89 (71.91%), Query Frame = 0


Query: 41  DIQGKLAGVAVSGLGTKRVADGMKLGHGNEIWEDMELNQLNFLLVGEGIESSRFQIGEGV 100
           +IQ KL  VAVSGL TK VADG+KLGHGNE  E MEL QLNFLL+GEGIES   +  + +
Sbjct: 497 NIQRKLTSVAVSGLSTKWVADGLKLGHGNESREGMELKQLNFLLIGEGIESGGLRFEKAL 556

Query: 101 VWRSKQSEALPLVGIVELIIDLVALLYAF 130
              +K  EA  LV +VELI+DL+ LL AF
Sbjct: 557 SGGAKTFEA--LVEVVELIVDLITLLGAF 583

[Close]

BLAST of Moc01g20840 vs. NCBI nr
Match: KAG6493150.1 (hypothetical protein ZIOFF_048127 [Zingiber officinale])

HSP 1 Score: 87.8 bits (216), Expect = 1.0e-13
Identity = 67/166 (40.36%), Postives = 93/166 (56.02%), Query Frame = 0


Query: 16  VGVIGVGDDGVDDAGGKIDL----RPRSGDIQGKLAGVAVSGLGTKRVADGMKLGHGNEI 75
           V V G  D G DDAGG + L        GD++G+ AG+A  GLG + VA G++ G G   
Sbjct: 293 VCVEGGFDGGFDDAGGDVGLVGIGGRGGGDVEGEDAGLA-GGLGGEGVAGGLEGGEGVVA 352

Query: 76  WEDMELNQLNFLLVGEGIESSRFQIGEGVVWRSKQSEALPLVGIVELIIDLVALLYAFEE 135
            ED+E +QL+ LL+G+G+ES+  + GEGVV   +  EA+    +VEL +DL+      EE
Sbjct: 353 GEDVEEHQLDLLLLGQGVESAGGEGGEGVVGGGEDGEAVE--AVVELAVDLLVHAGLLEE 412

Query: 136 FIEGCELVGLYEDDRDV-----GRTGGARRLSRQSRNKGTEEGQKG 173
             EG EL  L +D R+V     GR GG RRL      +  ++  KG
Sbjct: 413 ANEGGELTSLGQDRREVERPGWGRCGGHRRLGTGGWKEQRDQETKG 455

[Close]

BLAST of Moc01g20840 vs. NCBI nr
Match: PON80396.1 (hypothetical protein TorRG33x02_234000, partial [Trema orientale])

HSP 1 Score: 81.3 bits (199), Expect = 9.8e-12
Identity = 56/143 (39.16%), Postives = 80/143 (55.94%), Query Frame = 0


Query: 7   IDIHRQTLAVGVIGVGDDGVDDAGGKIDLRPRSGDIQGKLAGVAVSGLGTKRVADGMKLG 66
           +D+    L V + G  + G+DD+G  +D  P   ++Q  + GVA  GL   RVA  +++ 
Sbjct: 83  VDLVNSKLVVLINGSRNRGIDDSGRDVDPVPFDRNVQRVVKGVA--GLRPYRVAQSLEIL 142

Query: 67  HGNEIWEDMELNQLNFLLVGEGIESSRFQIGEGVVWRSKQSEALPLVGIVELIIDLVALL 126
             NE  ED+ L++L+ LL GEG+E +RF+  E  V   +  +A   VG VEL+ DL A  
Sbjct: 143 ERNERREDVVLDELDLLLGGEGVEGARFESRERAVCWGENGQA---VGDVELVFDLDADG 202

Query: 127 YAFEEFIEGCELVGLYEDDRDVG 150
            A EE  E  E  GL+ED  DVG
Sbjct: 203 GALEEADEDAEAAGLFEDSGDVG 220

[Close]

BLAST of Moc01g20840 vs. NCBI nr
Match: KAF7823417.1 (hypothetical protein G2W53_021561 [Senna tora])

HSP 1 Score: 73.6 bits (179), Expect = 2.0e-09
Identity = 54/132 (40.91%), Postives = 75/132 (56.82%), Query Frame = 0


Query: 9   IHRQTLAVGVIGVGDDGVDDAGGKIDLRPRSGDIQGKLAGVAVSGLGTKRVADGMKLGHG 68
           +HRQ L VG+    D  V      +   P + D+QG+  GV V GL    VA+G++ G G
Sbjct: 80  VHRQ-LLVGIHIPADRRVHHPRRHVHRAPGARDVQGEPIGV-VPGLRPDGVAEGVETGEG 139

Query: 69  NEIWEDMELNQLNFLLVGEGIESSRFQIGEGVVWRSKQSEALPLVGIVELIIDLVALLYA 128
           +E   D+EL++L  LLVGEG+E +  + GEGVV   ++ EA  +VG+ EL +DL   L  
Sbjct: 140 DEGGYDVELDELVLLLVGEGVEEAGLEGGEGVVGGGEEGEA--VVGVGELGVDLGGNLGR 199

Query: 129 FEEFIEGCELVG 141
            EE  EG E  G
Sbjct: 200 LEEADEGGEPAG 207

[Close]

BLAST of Moc01g20840 vs. NCBI nr
Match: PON53960.1 (hypothetical protein PanWU01x14_198380, partial [Parasponia andersonii])

HSP 1 Score: 73.2 bits (178), Expect = 2.7e-09
Identity = 51/143 (35.66%), Postives = 77/143 (53.85%), Query Frame = 0


Query: 7   IDIHRQTLAVGVIGVGDDGVDDAGGKIDLRPRSGDIQGKLAGVAVSGLGTKRVADGMKLG 66
           +D+    L V + G  + G+DD+   +D  P   ++Q  + G  V+ L   RVA  +++ 
Sbjct: 82  VDLVNSKLVVLINGSRNRGIDDSRRDVDPAPFDRNVQRVVKG--VTSLRPYRVAQSLEIL 141

Query: 67  HGNEIWEDMELNQLNFLLVGEGIESSRFQIGEGVVWRSKQSEALPLVGIVELIIDLVALL 126
             NE  ED+ L++L+ L  GEG++ +RF+  E  V   +  +A   VG VEL+ DL A  
Sbjct: 142 ERNERREDVVLDELDLLFGGEGVKGARFESRERAVCWGENGQA---VGDVELVFDLDAHG 201

Query: 127 YAFEEFIEGCELVGLYEDDRDVG 150
            A EE  E  E  GL+ED  DVG
Sbjct: 202 GALEEADEDAEAAGLFEDSGDVG 219

[Close]

BLAST of Moc01g20840 vs. ExPASy TrEMBL
Match: A0A2P5E4B6 (Uncharacterized protein (Fragment) OS=Trema orientale OX=63057 GN=TorRG33x02_234000 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 4.7e-12
Identity = 56/143 (39.16%), Postives = 80/143 (55.94%), Query Frame = 0


Query: 7   IDIHRQTLAVGVIGVGDDGVDDAGGKIDLRPRSGDIQGKLAGVAVSGLGTKRVADGMKLG 66
           +D+    L V + G  + G+DD+G  +D  P   ++Q  + GVA  GL   RVA  +++ 
Sbjct: 83  VDLVNSKLVVLINGSRNRGIDDSGRDVDPVPFDRNVQRVVKGVA--GLRPYRVAQSLEIL 142

Query: 67  HGNEIWEDMELNQLNFLLVGEGIESSRFQIGEGVVWRSKQSEALPLVGIVELIIDLVALL 126
             NE  ED+ L++L+ LL GEG+E +RF+  E  V   +  +A   VG VEL+ DL A  
Sbjct: 143 ERNERREDVVLDELDLLLGGEGVEGARFESRERAVCWGENGQA---VGDVELVFDLDADG 202

Query: 127 YAFEEFIEGCELVGLYEDDRDVG 150
            A EE  E  E  GL+ED  DVG
Sbjct: 203 GALEEADEDAEAAGLFEDSGDVG 220

[Close]

BLAST of Moc01g20840 vs. ExPASy TrEMBL
Match: A0A2P5BYU3 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_198380 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 1.3e-09
Identity = 51/143 (35.66%), Postives = 77/143 (53.85%), Query Frame = 0


Query: 7   IDIHRQTLAVGVIGVGDDGVDDAGGKIDLRPRSGDIQGKLAGVAVSGLGTKRVADGMKLG 66
           +D+    L V + G  + G+DD+   +D  P   ++Q  + G  V+ L   RVA  +++ 
Sbjct: 82  VDLVNSKLVVLINGSRNRGIDDSRRDVDPAPFDRNVQRVVKG--VTSLRPYRVAQSLEIL 141

Query: 67  HGNEIWEDMELNQLNFLLVGEGIESSRFQIGEGVVWRSKQSEALPLVGIVELIIDLVALL 126
             NE  ED+ L++L+ L  GEG++ +RF+  E  V   +  +A   VG VEL+ DL A  
Sbjct: 142 ERNERREDVVLDELDLLFGGEGVKGARFESRERAVCWGENGQA---VGDVELVFDLDAHG 201

Query: 127 YAFEEFIEGCELVGLYEDDRDVG 150
            A EE  E  E  GL+ED  DVG
Sbjct: 202 GALEEADEDAEAAGLFEDSGDVG 219

[Close]

BLAST of Moc01g20840 vs. ExPASy TrEMBL
Match: M0SWZ3 (Uncharacterized protein OS=Musa acuminata subsp. malaccensis OX=214687 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 7.1e-08
Identity = 55/149 (36.91%), Postives = 77/149 (51.68%), Query Frame = 0


Query: 9   IHRQTLAVGVIGVGDDGVDDAGGKIDL-RPRSGDIQGKLAGVAVSGLGTKRVADGMKLGH 68
           +H Q   VGV GV D  +DDA G + L   R G ++   AG+    L   RV  G++ G 
Sbjct: 35  VHHQR-EVGVDGVVDGNLDDARGDVGLVVRRRGHVERPHAGLP-RRLRHHRVGRGLERGQ 94

Query: 69  GNEIWEDMELNQLNFLLVGEGIESSRFQIGEGVVWRSKQSEALPLVGIVELIIDLVALLY 128
                ED+  ++L+ LL+ E +E +  + G+GVV   +Q E  P+V +VEL +DL+  L 
Sbjct: 95  AVVAREDVVEDELDLLLLAEAVECADLEAGKGVVGGGEQGE--PVVAVVELAVDLLVHLG 154

Query: 129 AFEEFIEGCELVGLYEDDRDVGRTGGARR 157
             EE  EG     L ED  DV   GG  R
Sbjct: 155 LAEEADEGGVPPALGEDGSDVELAGGGGR 179

[Close]

BLAST of Moc01g20840 vs. ExPASy TrEMBL
Match: A0A059ADF1 (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_J00937 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 7.8e-07
Identity = 45/128 (35.16%), Postives = 69/128 (53.91%), Query Frame = 0


Query: 26  VDDAGGKIDLRPRSGDIQGKLAGVAVSGLGTKRVADGMKLGHGNEIWEDMELNQLNFLLV 85
           ++DA G ++L    GDIQ +   V   G   +RVA G K G G ++ +DMEL+QL+ LLV
Sbjct: 21  LNDASGHLELIVAGGDIQWERPVVVTIGHRPQRVAHGPKQGLGEKLRDDMELDQLHQLLV 80

Query: 86  GEGIESSRFQIGEGVVWRSKQSEALPLVGIVELIIDLVALLYAFEEFIEGCELVGLYEDD 145
            E ++S   +  EG + R +  EA  +  ++EL  DL   +   E+  E  E+ G+ ED 
Sbjct: 81  AEAVQSPGLEAREGGIGRDQDGEA--VARVLELSGDLAGHVGDLEQPKEVREVTGVLEDL 140

Query: 146 RDVGRTGG 154
            +  R  G
Sbjct: 141 GEAWRACG 146

The following BLAST results are available for this feature:

BLAST of Moc01g20840 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6595261.1	1.1e-15	60.67	DnaJ protein P58IPK-like protein, partial [Cucurbita argyrosperma subsp. sororia...	[more]
KAG6493150.1	1.0e-13	40.36	hypothetical protein ZIOFF_048127 [Zingiber officinale]	[more]
PON80396.1	9.8e-12	39.16	hypothetical protein TorRG33x02_234000, partial [Trema orientale]	[more]
KAF7823417.1	2.0e-09	40.91	hypothetical protein G2W53_021561 [Senna tora]	[more]
PON53960.1	2.7e-09	35.66	hypothetical protein PanWU01x14_198380, partial [Parasponia andersonii]	[more]

BLAST of Moc01g20840 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc01g20840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2P5E4B6	4.7e-12	39.16	Uncharacterized protein (Fragment) OS=Trema orientale OX=63057 GN=TorRG33x02_234...	[more]
A0A2P5BYU3	1.3e-09	35.66	Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1...	[more]
M0SWZ3	7.1e-08	36.91	Uncharacterized protein OS=Musa acuminata subsp. malaccensis OX=214687 PE=4 SV=1	[more]
A0A059ADF1	7.8e-07	35.16	Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_J00937 PE=4 SV...	[more]

BLAST of Moc01g20840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 160..174
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 148..174

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc01g20840.1	Moc01g20840.1	mRNA