MS028364 (gene) Bitter gourd (TR) v1

Overview


Name	MS028364
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Pentatricopeptide repeat-containing protein
Location	scaffold720: 214475 .. 215911 (-)
RNA-Seq Expression	MS028364
Synteny	MS028364

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATAAGGTTCTCCCACTACTCCCCATCGGCCCAGCTTGGCCATCCTACCAAACTTGGTTAGCGCCTGGCGGTTGTCATTTGCCTGTATGGAACAGCACGAACGAGACAGACACAACGCAAGTTATGGTCGTCCATCTTTGTTGCCACTTACTCAAACCTGCGAATCGCCAATTTATCTTGTTCGTCAAAGGCTACAACTCTTGGGCTTTACGTATTCGAAATGCTCCCTCTCTTCGTAAAGCATTAACTATTTACTCCCAGATGCACCGTCAGTCCGTTCCTTATGACAGCTTCTCAATTCTCTTTATGCTCAAAGCCTGCGCTCCTTCCCGCAATCTCTCCATTCTTGAGCACCTCCATGCCCATATTGCCAAACTTGGGTTCACCTCACATCTTTATGTCGCTACATCCCTTCTCTATGCATACGTCCTTAACTCTTTACAACTGGCTTGCTTGTTGTTCGACGAAATGCCCCACAGGAACACTGTTTCCTGGAACACCATGATTTTTGGGTATTCCAAGTCAGGGAACGTAGACAGAGCTCGCCAGCTGTTTGATCTAATGCCCTCAAGAGATTTAGCATCATGGTCTGCTATGATTGCTGCTTACATTAACAATCGCAATTACAAGTGTGGCTTGGTTCTTTTCCAGGATATGATAGCCAGTGGTCTAAATCCTGACCAAATGGCGGCAGGATCAATCCTAAATGGGTGTGCTCATATGGGCTCTTTAGGATTTTTGGCCGGAAAATCAGTTCATGGTTTTGTGGTCAAGAATAGGTGGGAACTGAACTTGGAACTTGGTACAGTTTTGGTTTATATGTATGCCAAATGTGGATCTTTGAAGAATGCTTGCCAGGTATTTCATTTGATGCCTGAAAAGAACGTCAGGAGTTGGACTGCTCTGATTTGTGGGTCGGTCCAGCATGGCTACTCTAAGGAAGCATTAGTTTTATTTGAGATGATGAGGAATGAAGGTGTGGAACCGAATGAATTGACTTTCACTGGAATTTTAAGTGCGTGTGTTCATGCAGGGTTAGTTCAAGAAGGCCGCAAATATTTTAACATGATTGAAGAATTTAACTTGGAAATTAGGATTCAACATTATGGTTGTATGGTTGATCTTCTGGGTAAGTCGGGATTGTTGGAGGAAGCCTATGGCATTATTAAGAATATGAGACTCGAGCCTAATGTCATTGTGTGGAGCTCTATTTTGTCGGCCTGTAAGCAACATAACAGGTTTGACATAGCTGAGAGAGTTATTGAACAGATATTGGAAAGGACAGAACCCGAAAATTATGGTGGAATTTACTCTCTCATATCTGATTTGTATGTTTTGGAGGAAAAGTGGGATGATGCAGAAAAGATAAGGAAATTAATGAACCAAAATGTGAGGAAGGTTAGGGCCTATAGCCTTATTAGAAGTGAACTGTAG

mRNA sequence

ATGAATAAGGTTCTCCCACTACTCCCCATCGGCCCAGCTTGGCCATCCTACCAAACTTGGTTAGCGCCTGGCGGTTGTCATTTGCCTGTATGGAACAGCACGAACGAGACAGACACAACGCAAGTTATGGTCGTCCATCTTTGTTGCCACTTACTCAAACCTGCGAATCGCCAATTTATCTTGTTCGTCAAAGGCTACAACTCTTGGGCTTTACGTATTCGAAATGCTCCCTCTCTTCGTAAAGCATTAACTATTTACTCCCAGATGCACCGTCAGTCCGTTCCTTATGACAGCTTCTCAATTCTCTTTATGCTCAAAGCCTGCGCTCCTTCCCGCAATCTCTCCATTCTTGAGCACCTCCATGCCCATATTGCCAAACTTGGGTTCACCTCACATCTTTATGTCGCTACATCCCTTCTCTATGCATACGTCCTTAACTCTTTACAACTGGCTTGCTTGTTGTTCGACGAAATGCCCCACAGGAACACTGTTTCCTGGAACACCATGATTTTTGGGTATTCCAAGTCAGGGAACGTAGACAGAGCTCGCCAGCTGTTTGATCTAATGCCCTCAAGAGATTTAGCATCATGGTCTGCTATGATTGCTGCTTACATTAACAATCGCAATTACAAGTGTGGCTTGGTTCTTTTCCAGGATATGATAGCCAGTGGTCTAAATCCTGACCAAATGGCGGCAGGATCAATCCTAAATGGGTGTGCTCATATGGGCTCTTTAGGATTTTTGGCCGGAAAATCAGTTCATGGTTTTGTGGTCAAGAATAGGTGGGAACTGAACTTGGAACTTGGTACAGTTTTGGTTTATATGTATGCCAAATGTGGATCTTTGAAGAATGCTTGCCAGGTATTTCATTTGATGCCTGAAAAGAACGTCAGGAGTTGGACTGCTCTGATTTGTGGGTCGGTCCAGCATGGCTACTCTAAGGAAGCATTAGTTTTATTTGAGATGATGAGGAATGAAGGTGTGGAACCGAATGAATTGACTTTCACTGGAATTTTAAGTGCGTGTGTTCATGCAGGGTTAGTTCAAGAAGGCCGCAAATATTTTAACATGATTGAAGAATTTAACTTGGAAATTAGGATTCAACATTATGGTTGTATGGTTGATCTTCTGGGTAAGTCGGGATTGTTGGAGGAAGCCTATGGCATTATTAAGAATATGAGACTCGAGCCTAATGTCATTGTGTGGAGCTCTATTTTGTCGGCCTGTAAGCAACATAACAGGTTTGACATAGCTGAGAGAGTTATTGAACAGATATTGGAAAGGACAGAACCCGAAAATTATGGTGGAATTTACTCTCTCATATCTGATTTGTATGTTTTGGAGGAAAAGTGGGATGATGCAGAAAAGATAAGGAAATTAATGAACCAAAATGTGAGGAAGGTTAGGGCCTATAGCCTTATTAGAAGTGAACTGTAG

Coding sequence (CDS)

ATGAATAAGGTTCTCCCACTACTCCCCATCGGCCCAGCTTGGCCATCCTACCAAACTTGGTTAGCGCCTGGCGGTTGTCATTTGCCTGTATGGAACAGCACGAACGAGACAGACACAACGCAAGTTATGGTCGTCCATCTTTGTTGCCACTTACTCAAACCTGCGAATCGCCAATTTATCTTGTTCGTCAAAGGCTACAACTCTTGGGCTTTACGTATTCGAAATGCTCCCTCTCTTCGTAAAGCATTAACTATTTACTCCCAGATGCACCGTCAGTCCGTTCCTTATGACAGCTTCTCAATTCTCTTTATGCTCAAAGCCTGCGCTCCTTCCCGCAATCTCTCCATTCTTGAGCACCTCCATGCCCATATTGCCAAACTTGGGTTCACCTCACATCTTTATGTCGCTACATCCCTTCTCTATGCATACGTCCTTAACTCTTTACAACTGGCTTGCTTGTTGTTCGACGAAATGCCCCACAGGAACACTGTTTCCTGGAACACCATGATTTTTGGGTATTCCAAGTCAGGGAACGTAGACAGAGCTCGCCAGCTGTTTGATCTAATGCCCTCAAGAGATTTAGCATCATGGTCTGCTATGATTGCTGCTTACATTAACAATCGCAATTACAAGTGTGGCTTGGTTCTTTTCCAGGATATGATAGCCAGTGGTCTAAATCCTGACCAAATGGCGGCAGGATCAATCCTAAATGGGTGTGCTCATATGGGCTCTTTAGGATTTTTGGCCGGAAAATCAGTTCATGGTTTTGTGGTCAAGAATAGGTGGGAACTGAACTTGGAACTTGGTACAGTTTTGGTTTATATGTATGCCAAATGTGGATCTTTGAAGAATGCTTGCCAGGTATTTCATTTGATGCCTGAAAAGAACGTCAGGAGTTGGACTGCTCTGATTTGTGGGTCGGTCCAGCATGGCTACTCTAAGGAAGCATTAGTTTTATTTGAGATGATGAGGAATGAAGGTGTGGAACCGAATGAATTGACTTTCACTGGAATTTTAAGTGCGTGTGTTCATGCAGGGTTAGTTCAAGAAGGCCGCAAATATTTTAACATGATTGAAGAATTTAACTTGGAAATTAGGATTCAACATTATGGTTGTATGGTTGATCTTCTGGGTAAGTCGGGATTGTTGGAGGAAGCCTATGGCATTATTAAGAATATGAGACTCGAGCCTAATGTCATTGTGTGGAGCTCTATTTTGTCGGCCTGTAAGCAACATAACAGGTTTGACATAGCTGAGAGAGTTATTGAACAGATATTGGAAAGGACAGAACCCGAAAATTATGGTGGAATTTACTCTCTCATATCTGATTTGTATGTTTTGGAGGAAAAGTGGGATGATGCAGAAAAGATAAGGAAATTAATGAACCAAAATGTGAGGAAGGTTAGGGCCTATAGCCTTATTAGAAGTGAACTGTAG

Protein sequence

MNKVLPLLPIGPAWPSYQTWLAPGGCHLPVWNSTNETDTTQVMVVHLCCHLLKPANRQFILFVKGYNSWALRIRNAPSLRKALTIYSQMHRQSVPYDSFSILFMLKACAPSRNLSILEHLHAHIAKLGFTSHLYVATSLLYAYVLNSLQLACLLFDEMPHRNTVSWNTMIFGYSKSGNVDRARQLFDLMPSRDLASWSAMIAAYINNRNYKCGLVLFQDMIASGLNPDQMAAGSILNGCAHMGSLGFLAGKSVHGFVVKNRWELNLELGTVLVYMYAKCGSLKNACQVFHLMPEKNVRSWTALICGSVQHGYSKEALVLFEMMRNEGVEPNELTFTGILSACVHAGLVQEGRKYFNMIEEFNLEIRIQHYGCMVDLLGKSGLLEEAYGIIKNMRLEPNVIVWSSILSACKQHNRFDIAERVIEQILERTEPENYGGIYSLISDLYVLEEKWDDAEKIRKLMNQNVRKVRAYSLIRSEL

Homology

[Close]

BLAST of MS028364 vs. NCBI nr
Match: XP_022146506.1 (pentatricopeptide repeat-containing protein At5g66520-like [Momordica charantia])

HSP 1 Score: 885.6 bits (2287), Expect = 2.0e-253
Identity = 436/436 (100.00%), Postives = 436/436 (100.00%), Query Frame = 0


Query: 43  MVVHLCCHLLKPANRQFILFVKGYNSWALRIRNAPSLRKALTIYSQMHRQSVPYDSFSIL 102
           MVVHLCCHLLKPANRQFILFVKGYNSWALRIRNAPSLRKALTIYSQMHRQSVPYDSFSIL
Sbjct: 1   MVVHLCCHLLKPANRQFILFVKGYNSWALRIRNAPSLRKALTIYSQMHRQSVPYDSFSIL 60

Query: 103 FMLKACAPSRNLSILEHLHAHIAKLGFTSHLYVATSLLYAYVLNSLQLACLLFDEMPHRN 162
           FMLKACAPSRNLSILEHLHAHIAKLGFTSHLYVATSLLYAYVLNSLQLACLLFDEMPHRN
Sbjct: 61  FMLKACAPSRNLSILEHLHAHIAKLGFTSHLYVATSLLYAYVLNSLQLACLLFDEMPHRN 120

Query: 163 TVSWNTMIFGYSKSGNVDRARQLFDLMPSRDLASWSAMIAAYINNRNYKCGLVLFQDMIA 222
           TVSWNTMIFGYSKSGNVDRARQLFDLMPSRDLASWSAMIAAYINNRNYKCGLVLFQDMIA
Sbjct: 121 TVSWNTMIFGYSKSGNVDRARQLFDLMPSRDLASWSAMIAAYINNRNYKCGLVLFQDMIA 180

Query: 223 SGLNPDQMAAGSILNGCAHMGSLGFLAGKSVHGFVVKNRWELNLELGTVLVYMYAKCGSL 282
           SGLNPDQMAAGSILNGCAHMGSLGFLAGKSVHGFVVKNRWELNLELGTVLVYMYAKCGSL
Sbjct: 181 SGLNPDQMAAGSILNGCAHMGSLGFLAGKSVHGFVVKNRWELNLELGTVLVYMYAKCGSL 240

Query: 283 KNACQVFHLMPEKNVRSWTALICGSVQHGYSKEALVLFEMMRNEGVEPNELTFTGILSAC 342
           KNACQVFHLMPEKNVRSWTALICGSVQHGYSKEALVLFEMMRNEGVEPNELTFTGILSAC
Sbjct: 241 KNACQVFHLMPEKNVRSWTALICGSVQHGYSKEALVLFEMMRNEGVEPNELTFTGILSAC 300

Query: 343 VHAGLVQEGRKYFNMIEEFNLEIRIQHYGCMVDLLGKSGLLEEAYGIIKNMRLEPNVIVW 402
           VHAGLVQEGRKYFNMIEEFNLEIRIQHYGCMVDLLGKSGLLEEAYGIIKNMRLEPNVIVW
Sbjct: 301 VHAGLVQEGRKYFNMIEEFNLEIRIQHYGCMVDLLGKSGLLEEAYGIIKNMRLEPNVIVW 360

Query: 403 SSILSACKQHNRFDIAERVIEQILERTEPENYGGIYSLISDLYVLEEKWDDAEKIRKLMN 462
           SSILSACKQHNRFDIAERVIEQILERTEPENYGGIYSLISDLYVLEEKWDDAEKIRKLMN
Sbjct: 361 SSILSACKQHNRFDIAERVIEQILERTEPENYGGIYSLISDLYVLEEKWDDAEKIRKLMN 420

Query: 463 QNVRKVRAYSLIRSEL 479
           QNVRKVRAYSLIRSEL
Sbjct: 421 QNVRKVRAYSLIRSEL 436

[Close]

BLAST of MS028364 vs. NCBI nr
Match: XP_038877521.1 (pentatricopeptide repeat-containing protein At5g66520-like [Benincasa hispida])

HSP 1 Score: 752.3 bits (1941), Expect = 2.6e-213
Identity = 359/436 (82.34%), Postives = 401/436 (91.97%), Query Frame = 0


Query: 43  MVVHLCCHLLKPANRQFILFVKGYNSWALRIRNAPSLRKALTIYSQMHRQSVPYDSFSIL 102
           M+V+L CHLLKPA RQF L  KG+NSWALRIRNAPSL KAL IYSQMHRQSVP+DSFSIL
Sbjct: 1   MLVNLSCHLLKPACRQFALSAKGFNSWALRIRNAPSLHKALAIYSQMHRQSVPHDSFSIL 60

Query: 103 FMLKACAPSRNLSILEHLHAHIAKLGFTSHLYVATSLLYAYVLNSLQLACLLFDEMPHRN 162
           FMLKACA S N+S+L HLHAHI KLGFT+H++VATSLLYAYVL+S+QLACL+FDEMPH++
Sbjct: 61  FMLKACARSNNVSVLHHLHAHITKLGFTAHVFVATSLLYAYVLHSIQLACLVFDEMPHKS 120

Query: 163 TVSWNTMIFGYSKSGNVDRARQLFDLMPSRDLASWSAMIAAYINNRNYKCGLVLFQDMIA 222
           TV+WNTMI  YSK+G+VD ARQLFD MPSRDLASWS+MI AY+NNRNY+ GL++FQDMI 
Sbjct: 121 TVTWNTMILRYSKTGDVDAARQLFDQMPSRDLASWSSMITAYVNNRNYRAGLLIFQDMIV 180

Query: 223 SGLNPDQMAAGSILNGCAHMGSLGFLAGKSVHGFVVKNRWELNLELGTVLVYMYAKCGSL 282
           +G++PDQ+A GSILNGCAHMGSLG LAGKSVHGFVVKNRWELNL+LGTVLV MYAKCG L
Sbjct: 181 NGISPDQIAIGSILNGCAHMGSLGLLAGKSVHGFVVKNRWELNLQLGTVLVDMYAKCGFL 240

Query: 283 KNACQVFHLMPEKNVRSWTALICGSVQHGYSKEALVLFEMMRNEGVEPNELTFTGILSAC 342
           K ACQ+FH M EKNVR+WTALICG  QHGY KEAL+LFE MR EGVEPNELTFTG+LSAC
Sbjct: 241 KYACQIFHFMSEKNVRTWTALICGMAQHGYGKEALLLFETMRREGVEPNELTFTGVLSAC 300

Query: 343 VHAGLVQEGRKYFNMIEEFNLEIRIQHYGCMVDLLGKSGLLEEAYGIIKNMRLEPNVIVW 402
           VHAG V+EGRKYFNMIEE+ LEIRIQHYGCMVDLLG+SGLLEEAYG+IK+MRLEPNVIVW
Sbjct: 301 VHAGFVEEGRKYFNMIEEYGLEIRIQHYGCMVDLLGRSGLLEEAYGVIKSMRLEPNVIVW 360

Query: 403 SSILSACKQHNRFDIAERVIEQILERTEPENYGGIYSLISDLYVLEEKWDDAEKIRKLMN 462
           SS+LSACKQH RFD+AERVIEQIL++TEPEN+GGIYSLISDLYVLEEKWDDAEKIR L+N
Sbjct: 361 SSLLSACKQHKRFDMAERVIEQILKKTEPENHGGIYSLISDLYVLEEKWDDAEKIRNLLN 420

Query: 463 QNVRKVRAYSLIRSEL 479
           QNVRKVRAYSLIRS L
Sbjct: 421 QNVRKVRAYSLIRSGL 436

[Close]

BLAST of MS028364 vs. NCBI nr
Match: XP_023544798.1 (pentatricopeptide repeat-containing protein At5g66520-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 751.5 bits (1939), Expect = 4.4e-213
Identity = 365/436 (83.72%), Postives = 395/436 (90.60%), Query Frame = 0


Query: 43  MVVHLCCHLLKPANRQFILFVKGYNSWALRIRNAPSLRKALTIYSQMHRQSVPYDSFSIL 102
           M++    HLL PA RQF LF KG+NSWALRIRNAPSL KAL IYSQMHRQSVP+DSFSIL
Sbjct: 1   MLLSRSSHLLNPARRQFALFAKGFNSWALRIRNAPSLHKALAIYSQMHRQSVPHDSFSIL 60

Query: 103 FMLKACAPSRNLSILEHLHAHIAKLGFTSHLYVATSLLYAYVLNSLQLACLLFDEMPHRN 162
           F+LKACA S NLSIL HLHAHI KLGFT+H++VATSLLYAYVLNS +LACLLFDEMPH+N
Sbjct: 61  FVLKACARSNNLSILHHLHAHITKLGFTTHVFVATSLLYAYVLNSFELACLLFDEMPHKN 120

Query: 163 TVSWNTMIFGYSKSGNVDRARQLFDLMPSRDLASWSAMIAAYINNRNYKCGLVLFQDMIA 222
           TV+WNTMIFGYSK+G+VDRARQLFDLMPS+DLASWSA IAAY+NNRNY+ GL+LFQDMI 
Sbjct: 121 TVTWNTMIFGYSKTGDVDRARQLFDLMPSKDLASWSATIAAYVNNRNYRGGLLLFQDMIV 180

Query: 223 SGLNPDQMAAGSILNGCAHMGSLGFLAGKSVHGFVVKNRWELNLELGTVLVYMYAKCGSL 282
            G+ PDQMA GSIL GCA+MGSLG LAGKSVHGFVVKNRWELNLELGTVLV MYAKCG  
Sbjct: 181 IGITPDQMAVGSILKGCAYMGSLGLLAGKSVHGFVVKNRWELNLELGTVLVDMYAKCGFF 240

Query: 283 KNACQVFHLMPEKNVRSWTALICGSVQHGYSKEALVLFEMMRNEGVEPNELTFTGILSAC 342
           K ACQVFHLM EKNVR+WTALICG  QHGY KEAL LFEMMRNE VEPNELTFTGILSAC
Sbjct: 241 KYACQVFHLMSEKNVRTWTALICGLAQHGYCKEALDLFEMMRNECVEPNELTFTGILSAC 300

Query: 343 VHAGLVQEGRKYFNMIEEFNLEIRIQHYGCMVDLLGKSGLLEEAYGIIKNMRLEPNVIVW 402
           VHAG VQEGRKYFNMIEE+ LE RIQHYGCMVDLLG+SGLLEEAYG+IKNMRLEPN+IVW
Sbjct: 301 VHAGFVQEGRKYFNMIEEYGLETRIQHYGCMVDLLGRSGLLEEAYGVIKNMRLEPNIIVW 360

Query: 403 SSILSACKQHNRFDIAERVIEQILERTEPENYGGIYSLISDLYVLEEKWDDAEKIRKLMN 462
           SS+LSACKQH  FD+AERVIEQIL++ EPEN+GGIYSLISDLYVLEEKWDDAEKIR L+N
Sbjct: 361 SSLLSACKQHKSFDMAERVIEQILDKLEPENHGGIYSLISDLYVLEEKWDDAEKIRNLLN 420

Query: 463 QNVRKVRAYSLIRSEL 479
           QNVRKVRAYSLIRS L
Sbjct: 421 QNVRKVRAYSLIRSGL 436

[Close]

BLAST of MS028364 vs. NCBI nr
Match: XP_022925591.1 (pentatricopeptide repeat-containing protein At5g66520-like [Cucurbita moschata] >KAG6581530.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 750.4 bits (1936), Expect = 9.8e-213
Identity = 364/436 (83.49%), Postives = 396/436 (90.83%), Query Frame = 0


Query: 43  MVVHLCCHLLKPANRQFILFVKGYNSWALRIRNAPSLRKALTIYSQMHRQSVPYDSFSIL 102
           M++    HLL PA RQF LF KG+NSWALRIRNAPSL+KAL IYSQMHRQSVP+DSFSIL
Sbjct: 1   MLLSRSSHLLNPARRQFALFAKGFNSWALRIRNAPSLQKALAIYSQMHRQSVPHDSFSIL 60

Query: 103 FMLKACAPSRNLSILEHLHAHIAKLGFTSHLYVATSLLYAYVLNSLQLACLLFDEMPHRN 162
           F+LKACA S NLSIL HLHAHI KLGFT+H++VATSLLYAYVLNS +LACLLFDEMPH+N
Sbjct: 61  FVLKACARSNNLSILHHLHAHITKLGFTTHVFVATSLLYAYVLNSFELACLLFDEMPHKN 120

Query: 163 TVSWNTMIFGYSKSGNVDRARQLFDLMPSRDLASWSAMIAAYINNRNYKCGLVLFQDMIA 222
           TV+WNTMIFGYSK+G+VDRARQLFDLMPS+DLASWSA IAAY+NNRNY+ GL+LFQDMI 
Sbjct: 121 TVTWNTMIFGYSKTGDVDRARQLFDLMPSKDLASWSATIAAYVNNRNYRGGLLLFQDMIV 180

Query: 223 SGLNPDQMAAGSILNGCAHMGSLGFLAGKSVHGFVVKNRWELNLELGTVLVYMYAKCGSL 282
            G+ PDQMA GSIL GCA+MGSLG LAGKSVHGFVVKNRW+LNLELGTVLV MYAKCG  
Sbjct: 181 IGITPDQMAVGSILKGCAYMGSLGLLAGKSVHGFVVKNRWKLNLELGTVLVDMYAKCGFF 240

Query: 283 KNACQVFHLMPEKNVRSWTALICGSVQHGYSKEALVLFEMMRNEGVEPNELTFTGILSAC 342
           K ACQVFHLM EKNVR+WTALICG  QHGY KEAL LFEMMRNE VEPNELTFTGILSAC
Sbjct: 241 KYACQVFHLMSEKNVRTWTALICGLAQHGYCKEALDLFEMMRNECVEPNELTFTGILSAC 300

Query: 343 VHAGLVQEGRKYFNMIEEFNLEIRIQHYGCMVDLLGKSGLLEEAYGIIKNMRLEPNVIVW 402
           VHAG VQEGRKYFNMIEE+ LE RIQHYGCMVDLLG+SGLLEEAYG+IKNMRLEPN+IVW
Sbjct: 301 VHAGFVQEGRKYFNMIEEYGLETRIQHYGCMVDLLGRSGLLEEAYGVIKNMRLEPNIIVW 360

Query: 403 SSILSACKQHNRFDIAERVIEQILERTEPENYGGIYSLISDLYVLEEKWDDAEKIRKLMN 462
           SS+LSACKQH  FD+AERVIEQIL++ EPEN+GGIYSLISDLYVLEEKWDDAEKIR L+N
Sbjct: 361 SSLLSACKQHKSFDMAERVIEQILDKLEPENHGGIYSLISDLYVLEEKWDDAEKIRNLLN 420

Query: 463 QNVRKVRAYSLIRSEL 479
           QNVRKVRAYSLIRS L
Sbjct: 421 QNVRKVRAYSLIRSGL 436

[Close]

BLAST of MS028364 vs. NCBI nr
Match: XP_022978962.1 (pentatricopeptide repeat-containing protein At5g66520-like [Cucurbita maxima])

HSP 1 Score: 746.5 bits (1926), Expect = 1.4e-211
Identity = 362/436 (83.03%), Postives = 394/436 (90.37%), Query Frame = 0


Query: 43  MVVHLCCHLLKPANRQFILFVKGYNSWALRIRNAPSLRKALTIYSQMHRQSVPYDSFSIL 102
           M++    HLL PA RQF L  KG+NSWALRIRNAPSL KAL IYSQMHRQSVP+DSFSIL
Sbjct: 1   MLLSRSSHLLNPARRQFALSAKGFNSWALRIRNAPSLNKALAIYSQMHRQSVPHDSFSIL 60

Query: 103 FMLKACAPSRNLSILEHLHAHIAKLGFTSHLYVATSLLYAYVLNSLQLACLLFDEMPHRN 162
           F+LKACA S NLSIL HLHAHI KLGFT+H++VATSLLYAYVLNS +LACLLFDEMPH+N
Sbjct: 61  FVLKACARSNNLSILHHLHAHITKLGFTTHVFVATSLLYAYVLNSFELACLLFDEMPHKN 120

Query: 163 TVSWNTMIFGYSKSGNVDRARQLFDLMPSRDLASWSAMIAAYINNRNYKCGLVLFQDMIA 222
           TV+WNTMIFGYSK+G+VDRARQLFDLMPSRDLASWSA IAAY+NNRNY+ GL+LFQDMI 
Sbjct: 121 TVTWNTMIFGYSKTGDVDRARQLFDLMPSRDLASWSATIAAYVNNRNYRGGLLLFQDMIV 180

Query: 223 SGLNPDQMAAGSILNGCAHMGSLGFLAGKSVHGFVVKNRWELNLELGTVLVYMYAKCGSL 282
            G+ PDQMA GSIL GCA+MGSLG LAGKSVHGFVVKNRWELNLELGTVLV MYAKCG  
Sbjct: 181 IGITPDQMAVGSILKGCAYMGSLGLLAGKSVHGFVVKNRWELNLELGTVLVDMYAKCGFF 240

Query: 283 KNACQVFHLMPEKNVRSWTALICGSVQHGYSKEALVLFEMMRNEGVEPNELTFTGILSAC 342
           K ACQVFHLM EKNVR+WTALICG  +HGY KEAL LFEMMRNE VEPNELTFTGILSAC
Sbjct: 241 KYACQVFHLMSEKNVRTWTALICGLAKHGYCKEALDLFEMMRNECVEPNELTFTGILSAC 300

Query: 343 VHAGLVQEGRKYFNMIEEFNLEIRIQHYGCMVDLLGKSGLLEEAYGIIKNMRLEPNVIVW 402
           VHAG VQEGRKYFNMIEE+ LE RIQHYGCMVDLLG+SGLLEEAYG+I NMRLEPN+IVW
Sbjct: 301 VHAGFVQEGRKYFNMIEEYGLETRIQHYGCMVDLLGRSGLLEEAYGVINNMRLEPNIIVW 360

Query: 403 SSILSACKQHNRFDIAERVIEQILERTEPENYGGIYSLISDLYVLEEKWDDAEKIRKLMN 462
           SS+LSACKQH  FD+AERVIEQIL+++EPEN+GG+YSLISDLYVLEEKWDDAEKIR L+N
Sbjct: 361 SSLLSACKQHKSFDMAERVIEQILDKSEPENHGGVYSLISDLYVLEEKWDDAEKIRNLLN 420

Query: 463 QNVRKVRAYSLIRSEL 479
           QNVRKVRAYSLIRS L
Sbjct: 421 QNVRKVRAYSLIRSGL 436

[Close]

BLAST of MS028364 vs. ExPASy Swiss-Prot
Match: Q9FJY7 (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 3.5e-80
Identity = 163/418 (39.00%), Postives = 260/418 (62.20%), Query Frame = 0


Query: 69  WALRIRN---APSLRKALTIYSQMHRQSVPYDSFSILFMLKACAPSRNLSILE---HLHA 128
           W L IR    +    ++L +Y +M   S P+++++   +LKAC+   NLS  E    +HA
Sbjct: 83  WNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACS---NLSAFEETTQIHA 142

Query: 129 HIAKLGFTSHLYVATSLLYAY-VLNSLQLACLLFDEMPHRNTVSWNTMIFGYSKSGNVDR 188
            I KLG+ + +Y   SL+ +Y V  + +LA LLFD +P  + VSWN++I GY K+G +D 
Sbjct: 143 QITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDI 202

Query: 189 ARQLFDLMPSRDLASWSAMIAAYINNRNYKCGLVLFQDMIASGLNPDQMAAGSILNGCAH 248
           A  LF  M  ++  SW+ MI+ Y+     K  L LF +M  S + PD ++  + L+ CA 
Sbjct: 203 ALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQ 262

Query: 249 MGSLGFLAGKSVHGFVVKNRWELNLELGTVLVYMYAKCGSLKNACQVFHLMPEKNVRSWT 308
           +G+L    GK +H ++ K R  ++  LG VL+ MYAKCG ++ A +VF  + +K+V++WT
Sbjct: 263 LGALE--QGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWT 322

Query: 309 ALICGSVQHGYSKEALVLFEMMRNEGVEPNELTFTGILSACVHAGLVQEGRK-YFNMIEE 368
           ALI G   HG+ +EA+  F  M+  G++PN +TFT +L+AC + GLV+EG+  +++M  +
Sbjct: 323 ALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERD 382

Query: 369 FNLEIRIQHYGCMVDLLGKSGLLEEAYGIIKNMRLEPNVIVWSSILSACKQHNRFDIAER 428
           +NL+  I+HYGC+VDLLG++GLL+EA   I+ M L+PN ++W ++L AC+ H   ++ E 
Sbjct: 383 YNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEE 442

Query: 429 VIEQILERTEPENYGGIYSLISDLYVLEEKWDDAEKIRKLM-NQNVRKVRAYSLIRSE 478
            I +IL   +P  +GG Y   ++++ +++KWD A + R+LM  Q V KV   S I  E
Sbjct: 443 -IGEILIAIDP-YHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLE 493

[Close]

BLAST of MS028364 vs. ExPASy Swiss-Prot
Match: Q9FG16 (Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H88 PE=3 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 7.1e-73
Identity = 146/397 (36.78%), Postives = 240/397 (60.45%), Query Frame = 0


Query: 81  KALTIYSQMHRQSVPYDSFSILFMLKACAPSRNLSILEHLHAHIAKLGFTSHLYVATSLL 140
           KA   Y+QM +  +  D+ +  F++KA +    + + E  H+ I + GF + +YV  SL+
Sbjct: 100 KAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLV 159

Query: 141 YAYV-LNSLQLACLLFDEMPHRNTVSWNTMIFGYSKSGNVDRARQLFDLMPSRDLASWSA 200
           + Y     +  A  +F +M  R+ VSW +M+ GY K G V+ AR++FD MP R+L +WS 
Sbjct: 160 HMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSI 219

Query: 201 MIAAYINNRNYKCGLVLFQDMIASGLNPDQMAAGSILNGCAHMGSLGFLAGKSVHGFVVK 260
           MI  Y  N  ++  + LF+ M   G+  ++    S+++ CAH+G+L F  G+  + +VVK
Sbjct: 220 MINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEF--GERAYEYVVK 279

Query: 261 NRWELNLELGTVLVYMYAKCGSLKNACQVFHLMPEKNVRSWTALICGSVQHGYSKEALVL 320
           +   +NL LGT LV M+ +CG ++ A  VF  +PE +  SW+++I G   HG++ +A+  
Sbjct: 280 SHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHY 339

Query: 321 FEMMRNEGVEPNELTFTGILSACVHAGLVQEGRK-YFNMIEEFNLEIRIQHYGCMVDLLG 380
           F  M + G  P ++TFT +LSAC H GLV++G + Y NM ++  +E R++HYGC+VD+LG
Sbjct: 340 FSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLG 399

Query: 381 KSGLLEEAYGIIKNMRLEPNVIVWSSILSACKQHNRFDIAERVIEQILERTEPENYGGIY 440
           ++G L EA   I  M ++PN  +  ++L ACK +   ++AERV   +L + +PE + G Y
Sbjct: 400 RAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERV-GNMLIKVKPE-HSGYY 459

Query: 441 SLISDLYVLEEKWDDAEKIRKLMNQN-VRKVRAYSLI 475
            L+S++Y    +WD  E +R +M +  V+K   +SLI
Sbjct: 460 VLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLI 492

[Close]

BLAST of MS028364 vs. ExPASy Swiss-Prot
Match: Q9LS72 (Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E27 PE=2 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 3.5e-72
Identity = 159/468 (33.97%), Postives = 252/468 (53.85%), Query Frame = 0


Query: 81  KALTIYSQMHRQSVPYDSFSILFMLKACAPSRNLSILEHLHAHIAKLGFTSHLYVATSLL 140
           +A  ++S+M R  +  D+F+  F+LKAC+    L +++ +H HI KLG +S +YV  +L+
Sbjct: 100 QAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALI 159

Query: 141 YAY-------VLNSLQL------------------------------------------- 200
             Y       V ++++L                                           
Sbjct: 160 DCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISW 219

Query: 201 ---------------ACLLFDEMPHRNTVSWNTMIFGYSKSGNVDRARQLFDLM--PSRD 260
                          A  LF++MP RNTVSW+TM+ GYSK+G+++ AR +FD M  P+++
Sbjct: 220 NTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKN 279

Query: 261 LASWSAMIAAYINNRNYKCGLVLFQDMIASGLNPDQMAAGSILNGCAHMGSLGFLAGKSV 320
           + +W+ +IA Y      K    L   M+ASGL  D  A  SIL  C   G L    G  +
Sbjct: 280 VVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSL--GMRI 339

Query: 321 HGFVVKNRWELNLELGTVLVYMYAKCGSLKNACQVFHLMPEKNVRSWTALICGSVQHGYS 380
           H  + ++    N  +   L+ MYAKCG+LK A  VF+ +P+K++ SW  ++ G   HG+ 
Sbjct: 340 HSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHG 399

Query: 381 KEALVLFEMMRNEGVEPNELTFTGILSACVHAGLVQEGRKYFNMIEE-FNLEIRIQHYGC 440
           KEA+ LF  MR EG+ P+++TF  +L +C HAGL+ EG  YF  +E+ ++L  +++HYGC
Sbjct: 400 KEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGC 459

Query: 441 MVDLLGKSGLLEEAYGIIKNMRLEPNVIVWSSILSACKQHNRFDIAERVIEQI--LERTE 478
           +VDLLG+ G L+EA  +++ M +EPNV++W ++L AC+ HN  DIA+ V++ +  L+  +
Sbjct: 460 LVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCD 519

[Close]

BLAST of MS028364 vs. ExPASy Swiss-Prot
Match: Q56X05 (Pentatricopeptide repeat-containing protein At1g06143 OS=Arabidopsis thaliana OX=3702 GN=EMB1444 PE=2 SV=2)

HSP 1 Score: 273.9 bits (699), Expect = 3.5e-72
Identity = 146/416 (35.10%), Postives = 235/416 (56.49%), Query Frame = 0


Query: 81  KALTIYSQMHRQSVPYDSFSILFMLKACAPSRNLSILEHLHAHIAKLGFTSHLYVATSLL 140
           ++L +Y +M R SV   S++   ++KA + +      E L AHI K GF  H+ + T+L+
Sbjct: 109 RSLELYVRMLRDSVSPSSYTYSSLVKASSFASRFG--ESLQAHIWKFGFGFHVKIQTTLI 168

Query: 141 YAY-VLNSLQLACLLFDEMPHRNTVSWNTM------------------------------ 200
             Y     ++ A  +FDEMP R+ ++W TM                              
Sbjct: 169 DFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNC 228

Query: 201 -IFGYSKSGNVDRARQLFDLMPSRDLASWSAMIAAYINNRNYKCGLVLFQDMIASGLNPD 260
            I GY   GN+++A  LF+ MP +D+ SW+ MI  Y  N+ Y+  + +F  M+  G+ PD
Sbjct: 229 LINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPD 288

Query: 261 QMAAGSILNGCAHMGSLGFLAGKSVHGFVVKNRWELNLELGTVLVYMYAKCGSLKNACQV 320
           ++   ++++ CAH+G L    GK VH + ++N + L++ +G+ LV MY+KCGSL+ A  V
Sbjct: 289 EVTMSTVISACAHLGVLEI--GKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLV 348

Query: 321 FHLMPEKNVRSWTALICGSVQHGYSKEALVLFEMMRNEGVEPNELTFTGILSACVHAGLV 380
           F  +P+KN+  W ++I G   HG+++EAL +F  M  E V+PN +TF  + +AC HAGLV
Sbjct: 349 FFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLV 408

Query: 381 QEGRK-YFNMIEEFNLEIRIQHYGCMVDLLGKSGLLEEAYGIIKNMRLEPNVIVWSSILS 440
            EGR+ Y +MI+++++   ++HYG MV L  K+GL+ EA  +I NM  EPN ++W ++L 
Sbjct: 409 DEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLD 468

Query: 441 ACKQHNRFDIAERVIEQILERTEPENYGGIYSLISDLYVLEEKWDDAEKIRKLMNQ 464
            C+ H    IAE    +++   EP N  G Y L+  +Y  + +W D  +IR  M +
Sbjct: 469 GCRIHKNLVIAEIAFNKLMV-LEPMN-SGYYFLLVSMYAEQNRWRDVAEIRGRMRE 518

[Close]

BLAST of MS028364 vs. ExPASy Swiss-Prot
Match: Q9LSB8 (Putative pentatricopeptide repeat-containing protein At3g15930 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E51 PE=3 SV=2)

HSP 1 Score: 271.6 bits (693), Expect = 1.8e-71
Identity = 138/417 (33.09%), Postives = 250/417 (59.95%), Query Frame = 0


Query: 61  LFVKGYNSWALRIRNAPSLRKALTIYSQMHRQSVPYDSFSILFMLKACAPSRNLSILEHL 120
           L + GYN             +++ +  +M R  V   S ++L +L AC+  ++  + + +
Sbjct: 206 LMISGYN-------RMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRV 265

Query: 121 HAHIAKLGFTSHLYVATSLLYAY-VLNSLQLACLLFDEMPHRNTVSWNTMIFGYSKSGNV 180
           H ++++      L +  +L+ AY     + +A  +F  M  R+ +SW +++ GY + GN+
Sbjct: 266 HEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNL 325

Query: 181 DRARQLFDLMPSRDLASWSAMIAAYINNRNYKCGLVLFQDMIASGLNPDQMAAGSILNGC 240
             AR  FD MP RD  SW+ MI  Y+    +   L +F++M ++G+ PD+    S+L  C
Sbjct: 326 KLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTAC 385

Query: 241 AHMGSLGFLAGKSVHGFVVKNRWELNLELGTVLVYMYAKCGSLKNACQVFHLMPEKNVRS 300
           AH+GSL    G+ +  ++ KN+ + ++ +G  L+ MY KCG  + A +VFH M +++  +
Sbjct: 386 AHLGSLEI--GEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFT 445

Query: 301 WTALICGSVQHGYSKEALVLFEMMRNEGVEPNELTFTGILSACVHAGLVQEGRKYF-NMI 360
           WTA++ G   +G  +EA+ +F  M++  ++P+++T+ G+LSAC H+G+V + RK+F  M 
Sbjct: 446 WTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMR 505

Query: 361 EEFNLEIRIQHYGCMVDLLGKSGLLEEAYGIIKNMRLEPNVIVWSSILSACKQHNRFDIA 420
            +  +E  + HYGCMVD+LG++GL++EAY I++ M + PN IVW ++L A + HN   +A
Sbjct: 506 SDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMA 565

Query: 421 ERVIEQILERTEPENYGGIYSLISDLYVLEEKWDDAEKI-RKLMNQNVRKVRAYSLI 475
           E   ++ILE  EP+N G +Y+L+ ++Y   ++W D  ++ RK+++  ++K   +SLI
Sbjct: 566 ELAAKKILE-LEPDN-GAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLI 611

[Close]

BLAST of MS028364 vs. ExPASy TrEMBL
Match: A0A6J1CZK1 (pentatricopeptide repeat-containing protein At5g66520-like OS=Momordica charantia OX=3673 GN=LOC111015709 PE=4 SV=1)

HSP 1 Score: 885.6 bits (2287), Expect = 9.5e-254
Identity = 436/436 (100.00%), Postives = 436/436 (100.00%), Query Frame = 0


Query: 43  MVVHLCCHLLKPANRQFILFVKGYNSWALRIRNAPSLRKALTIYSQMHRQSVPYDSFSIL 102
           MVVHLCCHLLKPANRQFILFVKGYNSWALRIRNAPSLRKALTIYSQMHRQSVPYDSFSIL
Sbjct: 1   MVVHLCCHLLKPANRQFILFVKGYNSWALRIRNAPSLRKALTIYSQMHRQSVPYDSFSIL 60

Query: 103 FMLKACAPSRNLSILEHLHAHIAKLGFTSHLYVATSLLYAYVLNSLQLACLLFDEMPHRN 162
           FMLKACAPSRNLSILEHLHAHIAKLGFTSHLYVATSLLYAYVLNSLQLACLLFDEMPHRN
Sbjct: 61  FMLKACAPSRNLSILEHLHAHIAKLGFTSHLYVATSLLYAYVLNSLQLACLLFDEMPHRN 120

Query: 163 TVSWNTMIFGYSKSGNVDRARQLFDLMPSRDLASWSAMIAAYINNRNYKCGLVLFQDMIA 222
           TVSWNTMIFGYSKSGNVDRARQLFDLMPSRDLASWSAMIAAYINNRNYKCGLVLFQDMIA
Sbjct: 121 TVSWNTMIFGYSKSGNVDRARQLFDLMPSRDLASWSAMIAAYINNRNYKCGLVLFQDMIA 180

Query: 223 SGLNPDQMAAGSILNGCAHMGSLGFLAGKSVHGFVVKNRWELNLELGTVLVYMYAKCGSL 282
           SGLNPDQMAAGSILNGCAHMGSLGFLAGKSVHGFVVKNRWELNLELGTVLVYMYAKCGSL
Sbjct: 181 SGLNPDQMAAGSILNGCAHMGSLGFLAGKSVHGFVVKNRWELNLELGTVLVYMYAKCGSL 240

Query: 283 KNACQVFHLMPEKNVRSWTALICGSVQHGYSKEALVLFEMMRNEGVEPNELTFTGILSAC 342
           KNACQVFHLMPEKNVRSWTALICGSVQHGYSKEALVLFEMMRNEGVEPNELTFTGILSAC
Sbjct: 241 KNACQVFHLMPEKNVRSWTALICGSVQHGYSKEALVLFEMMRNEGVEPNELTFTGILSAC 300

Query: 343 VHAGLVQEGRKYFNMIEEFNLEIRIQHYGCMVDLLGKSGLLEEAYGIIKNMRLEPNVIVW 402
           VHAGLVQEGRKYFNMIEEFNLEIRIQHYGCMVDLLGKSGLLEEAYGIIKNMRLEPNVIVW
Sbjct: 301 VHAGLVQEGRKYFNMIEEFNLEIRIQHYGCMVDLLGKSGLLEEAYGIIKNMRLEPNVIVW 360

Query: 403 SSILSACKQHNRFDIAERVIEQILERTEPENYGGIYSLISDLYVLEEKWDDAEKIRKLMN 462
           SSILSACKQHNRFDIAERVIEQILERTEPENYGGIYSLISDLYVLEEKWDDAEKIRKLMN
Sbjct: 361 SSILSACKQHNRFDIAERVIEQILERTEPENYGGIYSLISDLYVLEEKWDDAEKIRKLMN 420

Query: 463 QNVRKVRAYSLIRSEL 479
           QNVRKVRAYSLIRSEL
Sbjct: 421 QNVRKVRAYSLIRSEL 436

[Close]

BLAST of MS028364 vs. ExPASy TrEMBL
Match: A0A6J1ECM3 (pentatricopeptide repeat-containing protein At5g66520-like OS=Cucurbita moschata OX=3662 GN=LOC111432978 PE=4 SV=1)

HSP 1 Score: 750.4 bits (1936), Expect = 4.8e-213
Identity = 364/436 (83.49%), Postives = 396/436 (90.83%), Query Frame = 0


Query: 43  MVVHLCCHLLKPANRQFILFVKGYNSWALRIRNAPSLRKALTIYSQMHRQSVPYDSFSIL 102
           M++    HLL PA RQF LF KG+NSWALRIRNAPSL+KAL IYSQMHRQSVP+DSFSIL
Sbjct: 1   MLLSRSSHLLNPARRQFALFAKGFNSWALRIRNAPSLQKALAIYSQMHRQSVPHDSFSIL 60

Query: 103 FMLKACAPSRNLSILEHLHAHIAKLGFTSHLYVATSLLYAYVLNSLQLACLLFDEMPHRN 162
           F+LKACA S NLSIL HLHAHI KLGFT+H++VATSLLYAYVLNS +LACLLFDEMPH+N
Sbjct: 61  FVLKACARSNNLSILHHLHAHITKLGFTTHVFVATSLLYAYVLNSFELACLLFDEMPHKN 120

Query: 163 TVSWNTMIFGYSKSGNVDRARQLFDLMPSRDLASWSAMIAAYINNRNYKCGLVLFQDMIA 222
           TV+WNTMIFGYSK+G+VDRARQLFDLMPS+DLASWSA IAAY+NNRNY+ GL+LFQDMI 
Sbjct: 121 TVTWNTMIFGYSKTGDVDRARQLFDLMPSKDLASWSATIAAYVNNRNYRGGLLLFQDMIV 180

Query: 223 SGLNPDQMAAGSILNGCAHMGSLGFLAGKSVHGFVVKNRWELNLELGTVLVYMYAKCGSL 282
            G+ PDQMA GSIL GCA+MGSLG LAGKSVHGFVVKNRW+LNLELGTVLV MYAKCG  
Sbjct: 181 IGITPDQMAVGSILKGCAYMGSLGLLAGKSVHGFVVKNRWKLNLELGTVLVDMYAKCGFF 240

Query: 283 KNACQVFHLMPEKNVRSWTALICGSVQHGYSKEALVLFEMMRNEGVEPNELTFTGILSAC 342
           K ACQVFHLM EKNVR+WTALICG  QHGY KEAL LFEMMRNE VEPNELTFTGILSAC
Sbjct: 241 KYACQVFHLMSEKNVRTWTALICGLAQHGYCKEALDLFEMMRNECVEPNELTFTGILSAC 300

Query: 343 VHAGLVQEGRKYFNMIEEFNLEIRIQHYGCMVDLLGKSGLLEEAYGIIKNMRLEPNVIVW 402
           VHAG VQEGRKYFNMIEE+ LE RIQHYGCMVDLLG+SGLLEEAYG+IKNMRLEPN+IVW
Sbjct: 301 VHAGFVQEGRKYFNMIEEYGLETRIQHYGCMVDLLGRSGLLEEAYGVIKNMRLEPNIIVW 360

Query: 403 SSILSACKQHNRFDIAERVIEQILERTEPENYGGIYSLISDLYVLEEKWDDAEKIRKLMN 462
           SS+LSACKQH  FD+AERVIEQIL++ EPEN+GGIYSLISDLYVLEEKWDDAEKIR L+N
Sbjct: 361 SSLLSACKQHKSFDMAERVIEQILDKLEPENHGGIYSLISDLYVLEEKWDDAEKIRNLLN 420

Query: 463 QNVRKVRAYSLIRSEL 479
           QNVRKVRAYSLIRS L
Sbjct: 421 QNVRKVRAYSLIRSGL 436

[Close]

BLAST of MS028364 vs. ExPASy TrEMBL
Match: A0A6J1IMI1 (pentatricopeptide repeat-containing protein At5g66520-like OS=Cucurbita maxima OX=3661 GN=LOC111478755 PE=4 SV=1)

HSP 1 Score: 746.5 bits (1926), Expect = 6.9e-212
Identity = 362/436 (83.03%), Postives = 394/436 (90.37%), Query Frame = 0


Query: 43  MVVHLCCHLLKPANRQFILFVKGYNSWALRIRNAPSLRKALTIYSQMHRQSVPYDSFSIL 102
           M++    HLL PA RQF L  KG+NSWALRIRNAPSL KAL IYSQMHRQSVP+DSFSIL
Sbjct: 1   MLLSRSSHLLNPARRQFALSAKGFNSWALRIRNAPSLNKALAIYSQMHRQSVPHDSFSIL 60

Query: 103 FMLKACAPSRNLSILEHLHAHIAKLGFTSHLYVATSLLYAYVLNSLQLACLLFDEMPHRN 162
           F+LKACA S NLSIL HLHAHI KLGFT+H++VATSLLYAYVLNS +LACLLFDEMPH+N
Sbjct: 61  FVLKACARSNNLSILHHLHAHITKLGFTTHVFVATSLLYAYVLNSFELACLLFDEMPHKN 120

Query: 163 TVSWNTMIFGYSKSGNVDRARQLFDLMPSRDLASWSAMIAAYINNRNYKCGLVLFQDMIA 222
           TV+WNTMIFGYSK+G+VDRARQLFDLMPSRDLASWSA IAAY+NNRNY+ GL+LFQDMI 
Sbjct: 121 TVTWNTMIFGYSKTGDVDRARQLFDLMPSRDLASWSATIAAYVNNRNYRGGLLLFQDMIV 180

Query: 223 SGLNPDQMAAGSILNGCAHMGSLGFLAGKSVHGFVVKNRWELNLELGTVLVYMYAKCGSL 282
            G+ PDQMA GSIL GCA+MGSLG LAGKSVHGFVVKNRWELNLELGTVLV MYAKCG  
Sbjct: 181 IGITPDQMAVGSILKGCAYMGSLGLLAGKSVHGFVVKNRWELNLELGTVLVDMYAKCGFF 240

Query: 283 KNACQVFHLMPEKNVRSWTALICGSVQHGYSKEALVLFEMMRNEGVEPNELTFTGILSAC 342
           K ACQVFHLM EKNVR+WTALICG  +HGY KEAL LFEMMRNE VEPNELTFTGILSAC
Sbjct: 241 KYACQVFHLMSEKNVRTWTALICGLAKHGYCKEALDLFEMMRNECVEPNELTFTGILSAC 300

Query: 343 VHAGLVQEGRKYFNMIEEFNLEIRIQHYGCMVDLLGKSGLLEEAYGIIKNMRLEPNVIVW 402
           VHAG VQEGRKYFNMIEE+ LE RIQHYGCMVDLLG+SGLLEEAYG+I NMRLEPN+IVW
Sbjct: 301 VHAGFVQEGRKYFNMIEEYGLETRIQHYGCMVDLLGRSGLLEEAYGVINNMRLEPNIIVW 360

Query: 403 SSILSACKQHNRFDIAERVIEQILERTEPENYGGIYSLISDLYVLEEKWDDAEKIRKLMN 462
           SS+LSACKQH  FD+AERVIEQIL+++EPEN+GG+YSLISDLYVLEEKWDDAEKIR L+N
Sbjct: 361 SSLLSACKQHKSFDMAERVIEQILDKSEPENHGGVYSLISDLYVLEEKWDDAEKIRNLLN 420

Query: 463 QNVRKVRAYSLIRSEL 479
           QNVRKVRAYSLIRS L
Sbjct: 421 QNVRKVRAYSLIRSGL 436

[Close]

BLAST of MS028364 vs. ExPASy TrEMBL
Match: A0A5A7UD49 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G00120 PE=4 SV=1)

HSP 1 Score: 719.5 bits (1856), Expect = 9.0e-204
Identity = 350/436 (80.28%), Postives = 391/436 (89.68%), Query Frame = 0


Query: 43  MVVHLCCHLLKPANRQFILFVKGYNSWALRIRNAPSLRKALTIYSQMHRQSVPYDSFSIL 102
           M+V+L   LL P+ RQF    KG+NSWALRIRNAPSL KAL I+SQMHRQSVP+DSFSIL
Sbjct: 1   MLVNL---LLNPSCRQFAFSAKGFNSWALRIRNAPSLHKALAIFSQMHRQSVPHDSFSIL 60

Query: 103 FMLKACAPSRNLSILEHLHAHIAKLGFTSHLYVATSLLYAYVLNSLQLACLLFDEMPHRN 162
           FMLKACA S NLSIL HLHAHI KLGFT+H++VATSLL++YVL+S QLA L+FDEMPH+N
Sbjct: 61  FMLKACASSNNLSILHHLHAHITKLGFTTHVFVATSLLHSYVLHSFQLARLVFDEMPHKN 120

Query: 163 TVSWNTMIFGYSKSGNVDRARQLFDLMPSRDLASWSAMIAAYINNRNYKCGLVLFQDMIA 222
           +V+WNTMI GYSK+G+V  ARQLFD MPSRDLASWSAMIAAYINNRNY+  L+LFQDMI 
Sbjct: 121 SVTWNTMISGYSKTGDVHTARQLFDRMPSRDLASWSAMIAAYINNRNYRGALLLFQDMII 180

Query: 223 SGLNPDQMAAGSILNGCAHMGSLGFLAGKSVHGFVVKNRWELNLELGTVLVYMYAKCGSL 282
           +G+NPDQMAAGSILNGCAHMGSLG LAGKSVHGFVVKNRWELNLELGTVLV+MYA+CG L
Sbjct: 181 NGINPDQMAAGSILNGCAHMGSLGSLAGKSVHGFVVKNRWELNLELGTVLVHMYARCGLL 240

Query: 283 KNACQVFHLMPEKNVRSWTALICGSVQHGYSKEALVLFEMMRNEGVEPNELTFTGILSAC 342
           K ACQ+FHLM E+NVR+WTALICG   HG  KEAL LFE MR+EGVEPNELTFTG+LSAC
Sbjct: 241 KYACQIFHLMSERNVRTWTALICGLAHHGCCKEALALFETMRHEGVEPNELTFTGVLSAC 300

Query: 343 VHAGLVQEGRKYFNMIEEFNLEIRIQHYGCMVDLLGKSGLLEEAYGIIKNMRLEPNVIVW 402
           VHAGLVQEGRKYFNMIEE+ LEIRIQHYGC VDLLG+SGLLEEAYG+IK+MR EPNVIVW
Sbjct: 301 VHAGLVQEGRKYFNMIEEYGLEIRIQHYGCFVDLLGRSGLLEEAYGVIKSMRFEPNVIVW 360

Query: 403 SSILSACKQHNRFDIAERVIEQILERTEPENYGGIYSLISDLYVLEEKWDDAEKIRKLMN 462
           SS+LSACKQH  FD+AERVIEQILE+TEP N+GG+YSL+SDLYVL+EKWDDAE IR L+N
Sbjct: 361 SSLLSACKQHKSFDLAERVIEQILEKTEPNNHGGVYSLVSDLYVLQEKWDDAENIRNLLN 420

Query: 463 QNVRKVRAYSLIRSEL 479
           Q VRKVRAYSLIRS L
Sbjct: 421 QKVRKVRAYSLIRSGL 433

[Close]

BLAST of MS028364 vs. ExPASy TrEMBL
Match: A0A1S3AYC4 (pentatricopeptide repeat-containing protein At5g66520-like OS=Cucumis melo OX=3656 GN=LOC103484239 PE=4 SV=1)

HSP 1 Score: 719.5 bits (1856), Expect = 9.0e-204
Identity = 350/436 (80.28%), Postives = 390/436 (89.45%), Query Frame = 0


Query: 43  MVVHLCCHLLKPANRQFILFVKGYNSWALRIRNAPSLRKALTIYSQMHRQSVPYDSFSIL 102
           M+V+L   LL P+ RQF    KG+NSWALRIRNAPSL KAL I+SQMHRQSVP+DSFSIL
Sbjct: 1   MLVNL---LLNPSCRQFAFSAKGFNSWALRIRNAPSLHKALAIFSQMHRQSVPHDSFSIL 60

Query: 103 FMLKACAPSRNLSILEHLHAHIAKLGFTSHLYVATSLLYAYVLNSLQLACLLFDEMPHRN 162
           FMLKACA S NLSIL HLHAHI KLGFT+H++VATSLL++YVL+S QLA L+FDEMPH+N
Sbjct: 61  FMLKACASSNNLSILHHLHAHITKLGFTTHVFVATSLLHSYVLHSFQLARLVFDEMPHKN 120

Query: 163 TVSWNTMIFGYSKSGNVDRARQLFDLMPSRDLASWSAMIAAYINNRNYKCGLVLFQDMIA 222
           +V+WNTMI GYSK+G+V  ARQLFD MPSRDLASWSAMIAAYINNRNY+  L+LFQDMI 
Sbjct: 121 SVTWNTMISGYSKTGDVHTARQLFDRMPSRDLASWSAMIAAYINNRNYRVALLLFQDMII 180

Query: 223 SGLNPDQMAAGSILNGCAHMGSLGFLAGKSVHGFVVKNRWELNLELGTVLVYMYAKCGSL 282
           +G+NPDQMAAGSILNGCAHMGSLG LAGKSVHGFVVKNRWELNLELGTVLV+MYAKCG L
Sbjct: 181 NGINPDQMAAGSILNGCAHMGSLGSLAGKSVHGFVVKNRWELNLELGTVLVHMYAKCGLL 240

Query: 283 KNACQVFHLMPEKNVRSWTALICGSVQHGYSKEALVLFEMMRNEGVEPNELTFTGILSAC 342
           K ACQ+FHLM E+NVR+WTALICG   HG  KEAL LFE MR+EGVEPNELTFTG+LSAC
Sbjct: 241 KYACQIFHLMSERNVRTWTALICGLAHHGCCKEALALFETMRHEGVEPNELTFTGVLSAC 300

Query: 343 VHAGLVQEGRKYFNMIEEFNLEIRIQHYGCMVDLLGKSGLLEEAYGIIKNMRLEPNVIVW 402
           VHAGLVQEGRKYFNMIEE+ LEIRIQHYGC VDLLG+SGLLEEAYG+IK+MR EPNVIVW
Sbjct: 301 VHAGLVQEGRKYFNMIEEYGLEIRIQHYGCFVDLLGRSGLLEEAYGVIKSMRFEPNVIVW 360

Query: 403 SSILSACKQHNRFDIAERVIEQILERTEPENYGGIYSLISDLYVLEEKWDDAEKIRKLMN 462
           SS+LSACKQH  FD+AERVIE ILE+TEP N+GG+YSL+SDLYVL+EKWDDAE IR L+N
Sbjct: 361 SSLLSACKQHKSFDLAERVIEHILEKTEPNNHGGVYSLVSDLYVLQEKWDDAENIRNLLN 420

Query: 463 QNVRKVRAYSLIRSEL 479
           Q VRKVRAYSLIRS L
Sbjct: 421 QKVRKVRAYSLIRSGL 433

[Close]

BLAST of MS028364 vs. TAIR 10
Match: AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 300.4 bits (768), Expect = 2.5e-81
Identity = 163/418 (39.00%), Postives = 260/418 (62.20%), Query Frame = 0


Query: 69  WALRIRN---APSLRKALTIYSQMHRQSVPYDSFSILFMLKACAPSRNLSILE---HLHA 128
           W L IR    +    ++L +Y +M   S P+++++   +LKAC+   NLS  E    +HA
Sbjct: 83  WNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACS---NLSAFEETTQIHA 142

Query: 129 HIAKLGFTSHLYVATSLLYAY-VLNSLQLACLLFDEMPHRNTVSWNTMIFGYSKSGNVDR 188
            I KLG+ + +Y   SL+ +Y V  + +LA LLFD +P  + VSWN++I GY K+G +D 
Sbjct: 143 QITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDI 202

Query: 189 ARQLFDLMPSRDLASWSAMIAAYINNRNYKCGLVLFQDMIASGLNPDQMAAGSILNGCAH 248
           A  LF  M  ++  SW+ MI+ Y+     K  L LF +M  S + PD ++  + L+ CA 
Sbjct: 203 ALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQ 262

Query: 249 MGSLGFLAGKSVHGFVVKNRWELNLELGTVLVYMYAKCGSLKNACQVFHLMPEKNVRSWT 308
           +G+L    GK +H ++ K R  ++  LG VL+ MYAKCG ++ A +VF  + +K+V++WT
Sbjct: 263 LGALE--QGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWT 322

Query: 309 ALICGSVQHGYSKEALVLFEMMRNEGVEPNELTFTGILSACVHAGLVQEGRK-YFNMIEE 368
           ALI G   HG+ +EA+  F  M+  G++PN +TFT +L+AC + GLV+EG+  +++M  +
Sbjct: 323 ALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERD 382

Query: 369 FNLEIRIQHYGCMVDLLGKSGLLEEAYGIIKNMRLEPNVIVWSSILSACKQHNRFDIAER 428
           +NL+  I+HYGC+VDLLG++GLL+EA   I+ M L+PN ++W ++L AC+ H   ++ E 
Sbjct: 383 YNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEE 442

Query: 429 VIEQILERTEPENYGGIYSLISDLYVLEEKWDDAEKIRKLM-NQNVRKVRAYSLIRSE 478
            I +IL   +P  +GG Y   ++++ +++KWD A + R+LM  Q V KV   S I  E
Sbjct: 443 -IGEILIAIDP-YHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLE 493

[Close]

BLAST of MS028364 vs. TAIR 10
Match: AT5G06540.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 276.2 bits (705), Expect = 5.1e-74
Identity = 146/397 (36.78%), Postives = 240/397 (60.45%), Query Frame = 0


Query: 81  KALTIYSQMHRQSVPYDSFSILFMLKACAPSRNLSILEHLHAHIAKLGFTSHLYVATSLL 140
           KA   Y+QM +  +  D+ +  F++KA +    + + E  H+ I + GF + +YV  SL+
Sbjct: 100 KAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLV 159

Query: 141 YAYV-LNSLQLACLLFDEMPHRNTVSWNTMIFGYSKSGNVDRARQLFDLMPSRDLASWSA 200
           + Y     +  A  +F +M  R+ VSW +M+ GY K G V+ AR++FD MP R+L +WS 
Sbjct: 160 HMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSI 219

Query: 201 MIAAYINNRNYKCGLVLFQDMIASGLNPDQMAAGSILNGCAHMGSLGFLAGKSVHGFVVK 260
           MI  Y  N  ++  + LF+ M   G+  ++    S+++ CAH+G+L F  G+  + +VVK
Sbjct: 220 MINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEF--GERAYEYVVK 279

Query: 261 NRWELNLELGTVLVYMYAKCGSLKNACQVFHLMPEKNVRSWTALICGSVQHGYSKEALVL 320
           +   +NL LGT LV M+ +CG ++ A  VF  +PE +  SW+++I G   HG++ +A+  
Sbjct: 280 SHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHY 339

Query: 321 FEMMRNEGVEPNELTFTGILSACVHAGLVQEGRK-YFNMIEEFNLEIRIQHYGCMVDLLG 380
           F  M + G  P ++TFT +LSAC H GLV++G + Y NM ++  +E R++HYGC+VD+LG
Sbjct: 340 FSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLG 399

Query: 381 KSGLLEEAYGIIKNMRLEPNVIVWSSILSACKQHNRFDIAERVIEQILERTEPENYGGIY 440
           ++G L EA   I  M ++PN  +  ++L ACK +   ++AERV   +L + +PE + G Y
Sbjct: 400 RAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERV-GNMLIKVKPE-HSGYY 459

Query: 441 SLISDLYVLEEKWDDAEKIRKLMNQN-VRKVRAYSLI 475
            L+S++Y    +WD  E +R +M +  V+K   +SLI
Sbjct: 460 VLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLI 492

[Close]

BLAST of MS028364 vs. TAIR 10
Match: AT1G06150.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 273.9 bits (699), Expect = 2.5e-73
Identity = 146/416 (35.10%), Postives = 235/416 (56.49%), Query Frame = 0


Query: 81   KALTIYSQMHRQSVPYDSFSILFMLKACAPSRNLSILEHLHAHIAKLGFTSHLYVATSLL 140
            ++L +Y +M R SV   S++   ++KA + +      E L AHI K GF  H+ + T+L+
Sbjct: 854  RSLELYVRMLRDSVSPSSYTYSSLVKASSFASRFG--ESLQAHIWKFGFGFHVKIQTTLI 913

Query: 141  YAY-VLNSLQLACLLFDEMPHRNTVSWNTM------------------------------ 200
              Y     ++ A  +FDEMP R+ ++W TM                              
Sbjct: 914  DFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNC 973

Query: 201  -IFGYSKSGNVDRARQLFDLMPSRDLASWSAMIAAYINNRNYKCGLVLFQDMIASGLNPD 260
             I GY   GN+++A  LF+ MP +D+ SW+ MI  Y  N+ Y+  + +F  M+  G+ PD
Sbjct: 974  LINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPD 1033

Query: 261  QMAAGSILNGCAHMGSLGFLAGKSVHGFVVKNRWELNLELGTVLVYMYAKCGSLKNACQV 320
            ++   ++++ CAH+G L    GK VH + ++N + L++ +G+ LV MY+KCGSL+ A  V
Sbjct: 1034 EVTMSTVISACAHLGVLEI--GKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLV 1093

Query: 321  FHLMPEKNVRSWTALICGSVQHGYSKEALVLFEMMRNEGVEPNELTFTGILSACVHAGLV 380
            F  +P+KN+  W ++I G   HG+++EAL +F  M  E V+PN +TF  + +AC HAGLV
Sbjct: 1094 FFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLV 1153

Query: 381  QEGRK-YFNMIEEFNLEIRIQHYGCMVDLLGKSGLLEEAYGIIKNMRLEPNVIVWSSILS 440
             EGR+ Y +MI+++++   ++HYG MV L  K+GL+ EA  +I NM  EPN ++W ++L 
Sbjct: 1154 DEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLD 1213

Query: 441  ACKQHNRFDIAERVIEQILERTEPENYGGIYSLISDLYVLEEKWDDAEKIRKLMNQ 464
             C+ H    IAE    +++   EP N  G Y L+  +Y  + +W D  +IR  M +
Sbjct: 1214 GCRIHKNLVIAEIAFNKLMV-LEPMN-SGYYFLLVSMYAEQNRWRDVAEIRGRMRE 1263

[Close]

BLAST of MS028364 vs. TAIR 10
Match: AT3G29230.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 273.9 bits (699), Expect = 2.5e-73
Identity = 159/468 (33.97%), Postives = 252/468 (53.85%), Query Frame = 0


Query: 81  KALTIYSQMHRQSVPYDSFSILFMLKACAPSRNLSILEHLHAHIAKLGFTSHLYVATSLL 140
           +A  ++S+M R  +  D+F+  F+LKAC+    L +++ +H HI KLG +S +YV  +L+
Sbjct: 100 QAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALI 159

Query: 141 YAY-------VLNSLQL------------------------------------------- 200
             Y       V ++++L                                           
Sbjct: 160 DCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISW 219

Query: 201 ---------------ACLLFDEMPHRNTVSWNTMIFGYSKSGNVDRARQLFDLM--PSRD 260
                          A  LF++MP RNTVSW+TM+ GYSK+G+++ AR +FD M  P+++
Sbjct: 220 NTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKN 279

Query: 261 LASWSAMIAAYINNRNYKCGLVLFQDMIASGLNPDQMAAGSILNGCAHMGSLGFLAGKSV 320
           + +W+ +IA Y      K    L   M+ASGL  D  A  SIL  C   G L    G  +
Sbjct: 280 VVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSL--GMRI 339

Query: 321 HGFVVKNRWELNLELGTVLVYMYAKCGSLKNACQVFHLMPEKNVRSWTALICGSVQHGYS 380
           H  + ++    N  +   L+ MYAKCG+LK A  VF+ +P+K++ SW  ++ G   HG+ 
Sbjct: 340 HSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHG 399

Query: 381 KEALVLFEMMRNEGVEPNELTFTGILSACVHAGLVQEGRKYFNMIEE-FNLEIRIQHYGC 440
           KEA+ LF  MR EG+ P+++TF  +L +C HAGL+ EG  YF  +E+ ++L  +++HYGC
Sbjct: 400 KEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGC 459

Query: 441 MVDLLGKSGLLEEAYGIIKNMRLEPNVIVWSSILSACKQHNRFDIAERVIEQI--LERTE 478
           +VDLLG+ G L+EA  +++ M +EPNV++W ++L AC+ HN  DIA+ V++ +  L+  +
Sbjct: 460 LVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCD 519

[Close]

BLAST of MS028364 vs. TAIR 10
Match: AT3G15930.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 271.6 bits (693), Expect = 1.2e-72
Identity = 138/417 (33.09%), Postives = 250/417 (59.95%), Query Frame = 0


Query: 61  LFVKGYNSWALRIRNAPSLRKALTIYSQMHRQSVPYDSFSILFMLKACAPSRNLSILEHL 120
           L + GYN             +++ +  +M R  V   S ++L +L AC+  ++  + + +
Sbjct: 206 LMISGYN-------RMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRV 265

Query: 121 HAHIAKLGFTSHLYVATSLLYAY-VLNSLQLACLLFDEMPHRNTVSWNTMIFGYSKSGNV 180
           H ++++      L +  +L+ AY     + +A  +F  M  R+ +SW +++ GY + GN+
Sbjct: 266 HEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNL 325

Query: 181 DRARQLFDLMPSRDLASWSAMIAAYINNRNYKCGLVLFQDMIASGLNPDQMAAGSILNGC 240
             AR  FD MP RD  SW+ MI  Y+    +   L +F++M ++G+ PD+    S+L  C
Sbjct: 326 KLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTAC 385

Query: 241 AHMGSLGFLAGKSVHGFVVKNRWELNLELGTVLVYMYAKCGSLKNACQVFHLMPEKNVRS 300
           AH+GSL    G+ +  ++ KN+ + ++ +G  L+ MY KCG  + A +VFH M +++  +
Sbjct: 386 AHLGSLEI--GEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFT 445

Query: 301 WTALICGSVQHGYSKEALVLFEMMRNEGVEPNELTFTGILSACVHAGLVQEGRKYF-NMI 360
           WTA++ G   +G  +EA+ +F  M++  ++P+++T+ G+LSAC H+G+V + RK+F  M 
Sbjct: 446 WTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMR 505

Query: 361 EEFNLEIRIQHYGCMVDLLGKSGLLEEAYGIIKNMRLEPNVIVWSSILSACKQHNRFDIA 420
            +  +E  + HYGCMVD+LG++GL++EAY I++ M + PN IVW ++L A + HN   +A
Sbjct: 506 SDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMA 565

Query: 421 ERVIEQILERTEPENYGGIYSLISDLYVLEEKWDDAEKI-RKLMNQNVRKVRAYSLI 475
           E   ++ILE  EP+N G +Y+L+ ++Y   ++W D  ++ RK+++  ++K   +SLI
Sbjct: 566 ELAAKKILE-LEPDN-GAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLI 611

The following BLAST results are available for this feature:

BLAST of MS028364 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022146506.1	2.0e-253	100.00	pentatricopeptide repeat-containing protein At5g66520-like [Momordica charantia]	[more]
XP_038877521.1	2.6e-213	82.34	pentatricopeptide repeat-containing protein At5g66520-like [Benincasa hispida]	[more]
XP_023544798.1	4.4e-213	83.72	pentatricopeptide repeat-containing protein At5g66520-like [Cucurbita pepo subsp...	[more]
XP_022925591.1	9.8e-213	83.49	pentatricopeptide repeat-containing protein At5g66520-like [Cucurbita moschata] ...	[more]
XP_022978962.1	1.4e-211	83.03	pentatricopeptide repeat-containing protein At5g66520-like [Cucurbita maxima]	[more]

BLAST of MS028364 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJY7	3.5e-80	39.00	Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX...	[more]
Q9FG16	7.1e-73	36.78	Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana OX...	[more]
Q9LS72	3.5e-72	33.97	Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana OX...	[more]
Q56X05	3.5e-72	35.10	Pentatricopeptide repeat-containing protein At1g06143 OS=Arabidopsis thaliana OX...	[more]
Q9LSB8	1.8e-71	33.09	Putative pentatricopeptide repeat-containing protein At3g15930 OS=Arabidopsis th...	[more]

BLAST of MS028364 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CZK1	9.5e-254	100.00	pentatricopeptide repeat-containing protein At5g66520-like OS=Momordica charanti...	[more]
A0A6J1ECM3	4.8e-213	83.49	pentatricopeptide repeat-containing protein At5g66520-like OS=Cucurbita moschata...	[more]
A0A6J1IMI1	6.9e-212	83.03	pentatricopeptide repeat-containing protein At5g66520-like OS=Cucurbita maxima O...	[more]
A0A5A7UD49	9.0e-204	80.28	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3AYC4	9.0e-204	80.28	pentatricopeptide repeat-containing protein At5g66520-like OS=Cucumis melo OX=36...	[more]

BLAST of MS028364 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G66520.1	2.5e-81	39.00	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G06540.1	5.1e-74	36.78	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G06150.1	2.5e-73	35.10	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G29230.1	2.5e-73	33.97	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G15930.1	1.2e-72	33.09	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 196..228 e-value: 1.7E-5 score: 22.7 coord: 299..332 e-value: 2.4E-6 score: 25.3 coord: 164..193 e-value: 1.2E-7 score: 29.4
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 196..225 e-value: 0.003 score: 17.7 coord: 370..394 e-value: 0.011 score: 16.0 coord: 401..428 e-value: 0.26 score: 11.6 coord: 164..193 e-value: 3.6E-8 score: 33.1
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 295..343 e-value: 3.6E-11 score: 43.1
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 162..196 score: 11.794416
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 296..330 score: 11.081932
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 250..349 e-value: 1.2E-21 score: 78.9
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 350..477 e-value: 2.4E-15 score: 58.8 coord: 74..249 e-value: 2.6E-26 score: 94.8
None	No IPR available	PANTHER	PTHR47928:SF104	OS01G0800400 PROTEIN	coord: 64..474
None	No IPR available	PANTHER	PTHR47928	REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED	coord: 64..474

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS028364.1	MS028364.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding