MS028360 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCAACGATTGATCATGGAGGAGGCGGAACTGGTGGGAGGAGAAAGAAGCATCAGACTGTATGTATGCTTTTTATTTTGGTCTCAAATTGTAATGTTTTCGGTATCTGATATGGAGACGATGGCAGGAGAAAGAGGAAGTGATACTACACCCGCGAGACCTGAAAATAGCGTGGGGCTCCGATGGAACTCAGTGGAAGATTGAGCATTCAAACGATGAGTAAGCACCATGGCCATGCCTTGTAATTTTGATCAATATGTCGTAGAGATGGAATGAATGAATGAATGGTTGTGATTTCTAAATAGGCAAAATAGCTATGCAGAAGCAGTCAAAGTGATATGGTTCGAAGTAAAGGCTACGTACAAGAATGCAAAACGAGGGAGCAAATATAATATTGGGTTCAATATCAGCCTAAAGTCTGAGGCCTTTGGGTGGGAGAGCAGTCCAGTGTTCCTGATGGCCAAGGTTGGAGAATCAGGATCCTACACTTGGAAAAGGCTCTATCTCACTGACATGGAAGCCGAGAAGCCTTTCAACATTCCCGACAATTTCGAGATCGTTATTCCAATCACCGCCAAGGACACCACCCTGCAATTCGGCCTTTATGAAATCTGGGGTGGCAGATGGAAGGGAGGCTTGTGCATTCATCATGCTTATGTTACCAAAGTTTGA ATGTCAACGATTGATCATGGAGGAGGCGGAACTGGTGGGAGGAGAAAGAAGCATCAGACTGAGAAAGAGGAAGTGATACTACACCCGCGAGACCTGAAAATAGCGTGGGGCTCCGATGGAACTCAGTGGAAGATTGAGCATTCAAACGATGAGCAAAATAGCTATGCAGAAGCAGTCAAAGTGATATGGTTCGAAGTAAAGGCTACGTACAAGAATGCAAAACGAGGGAGCAAATATAATATTGGGTTCAATATCAGCCTAAAGTCTGAGGCCTTTGGGTGGGAGAGCAGTCCAGTGTTCCTGATGGCCAAGGTTGGAGAATCAGGATCCTACACTTGGAAAAGGCTCTATCTCACTGACATGGAAGCCGAGAAGCCTTTCAACATTCCCGACAATTTCGAGATCGTTATTCCAATCACCGCCAAGGACACCACCCTGCAATTCGGCCTTTATGAAATCTGGGGTGGCAGATGGAAGGGAGGCTTGTGCATTCATCATGCTTATGTTACCAAAGTTTGA ATGTCAACGATTGATCATGGAGGAGGCGGAACTGGTGGGAGGAGAAAGAAGCATCAGACTGAGAAAGAGGAAGTGATACTACACCCGCGAGACCTGAAAATAGCGTGGGGCTCCGATGGAACTCAGTGGAAGATTGAGCATTCAAACGATGAGCAAAATAGCTATGCAGAAGCAGTCAAAGTGATATGGTTCGAAGTAAAGGCTACGTACAAGAATGCAAAACGAGGGAGCAAATATAATATTGGGTTCAATATCAGCCTAAAGTCTGAGGCCTTTGGGTGGGAGAGCAGTCCAGTGTTCCTGATGGCCAAGGTTGGAGAATCAGGATCCTACACTTGGAAAAGGCTCTATCTCACTGACATGGAAGCCGAGAAGCCTTTCAACATTCCCGACAATTTCGAGATCGTTATTCCAATCACCGCCAAGGACACCACCCTGCAATTCGGCCTTTATGAAATCTGGGGTGGCAGATGGAAGGGAGGCTTGTGCATTCATCATGCTTATGTTACCAAAGTTTGA MSTIDHGGGGTGGRRKKHQTEKEEVILHPRDLKIAWGSDGTQWKIEHSNDEQNSYAEAVKVIWFEVKATYKNAKRGSKYNIGFNISLKSEAFGWESSPVFLMAKVGESGSYTWKRLYLTDMEAEKPFNIPDNFEIVIPITAKDTTLQFGLYEIWGGRWKGGLCIHHAYVTKV Homology
BLAST of MS028360 vs. NCBI nr
Match: XP_022146661.1 (protein PHLOEM PROTEIN 2-LIKE A9-like [Momordica charantia]) HSP 1 Score: 365.5 bits (937), Expect = 2.4e-97 Identity = 171/172 (99.42%), Postives = 171/172 (99.42%), Query Frame = 0
BLAST of MS028360 vs. NCBI nr
Match: KAE8647786.1 (hypothetical protein Csa_003897 [Cucumis sativus]) HSP 1 Score: 234.2 bits (596), Expect = 8.5e-58 Identity = 107/153 (69.93%), Postives = 123/153 (80.39%), Query Frame = 0
BLAST of MS028360 vs. NCBI nr
Match: XP_004134524.2 (protein PHLOEM PROTEIN 2-LIKE A9 [Cucumis sativus]) HSP 1 Score: 234.2 bits (596), Expect = 8.5e-58 Identity = 107/153 (69.93%), Postives = 123/153 (80.39%), Query Frame = 0
BLAST of MS028360 vs. NCBI nr
Match: XP_038877535.1 (protein PHLOEM PROTEIN 2-LIKE A9-like [Benincasa hispida]) HSP 1 Score: 233.8 bits (595), Expect = 1.1e-57 Identity = 112/172 (65.12%), Postives = 130/172 (75.58%), Query Frame = 0
BLAST of MS028360 vs. NCBI nr
Match: XP_008439445.1 (PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9-like [Cucumis melo]) HSP 1 Score: 214.5 bits (545), Expect = 7.0e-52 Identity = 101/153 (66.01%), Postives = 116/153 (75.82%), Query Frame = 0
BLAST of MS028360 vs. ExPASy Swiss-Prot
Match: Q9SA16 (Protein PHLOEM PROTEIN 2-LIKE A9 OS=Arabidopsis thaliana OX=3702 GN=PP2A9 PE=2 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 8.6e-29 Identity = 67/170 (39.41%), Postives = 88/170 (51.76%), Query Frame = 0
BLAST of MS028360 vs. ExPASy TrEMBL
Match: A0A6J1D012 (protein PHLOEM PROTEIN 2-LIKE A9-like OS=Momordica charantia OX=3673 GN=LOC111015810 PE=4 SV=1) HSP 1 Score: 365.5 bits (937), Expect = 1.2e-97 Identity = 171/172 (99.42%), Postives = 171/172 (99.42%), Query Frame = 0
BLAST of MS028360 vs. ExPASy TrEMBL
Match: A0A0A0KJ41 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G538620 PE=4 SV=1) HSP 1 Score: 234.2 bits (596), Expect = 4.1e-58 Identity = 107/153 (69.93%), Postives = 123/153 (80.39%), Query Frame = 0
BLAST of MS028360 vs. ExPASy TrEMBL
Match: A0A5A7U9J3 (Protein PHLOEM PROTEIN 2-LIKE A9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G00170 PE=4 SV=1) HSP 1 Score: 214.5 bits (545), Expect = 3.4e-52 Identity = 101/153 (66.01%), Postives = 116/153 (75.82%), Query Frame = 0
BLAST of MS028360 vs. ExPASy TrEMBL
Match: A0A1S3AZF3 (protein PHLOEM PROTEIN 2-LIKE A9-like OS=Cucumis melo OX=3656 GN=LOC103484248 PE=4 SV=1) HSP 1 Score: 214.5 bits (545), Expect = 3.4e-52 Identity = 101/153 (66.01%), Postives = 116/153 (75.82%), Query Frame = 0
BLAST of MS028360 vs. ExPASy TrEMBL
Match: A0A6J1IRT7 (protein PHLOEM PROTEIN 2-LIKE A9-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111478757 PE=4 SV=1) HSP 1 Score: 185.3 bits (469), Expect = 2.2e-43 Identity = 87/156 (55.77%), Postives = 109/156 (69.87%), Query Frame = 0
BLAST of MS028360 vs. TAIR 10
Match: AT1G31200.1 (phloem protein 2-A9 ) HSP 1 Score: 128.3 bits (321), Expect = 6.1e-30 Identity = 67/170 (39.41%), Postives = 88/170 (51.76%), Query Frame = 0
BLAST of MS028360 vs. TAIR 10
Match: AT1G10155.1 (phloem protein 2-A10 ) HSP 1 Score: 124.4 bits (311), Expect = 8.8e-29 Identity = 67/160 (41.88%), Postives = 88/160 (55.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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