MS028340 (gene) Bitter gourd (TR) v1

Overview


Name	MS028340
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Rab family
Location	scaffold47: 3602329 .. 3604891 (+)
RNA-Seq Expression	MS028340
Synteny	MS028340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGGTTATAAAGGTCAAGATGAATATGATTACCTGTTTAAGTTGGTTTTGATCGGTGATTCTGGGGTGGGAAAATCAAACCTGCTTTCGAGGTTTACGAGGAACCAATTTAATTTAGAATCGAAGTCTACTATTGGGGTTGAGTTTGCTACCAAGAGTTTGGAAATTGATGGGAAGGTAATCAAGGCTCAGATTTGGGACACTGCTGGACAAGAAAGGTTTGGTTTCTTCGTTGTTCTTTTTGGAAGTTCTAATTGATTTTAGTTTTAAGTCAAACTAAATTTTTGGGTATCTCTCAAAATTCCGATTACAGTTGCTTGGTTTGTTTGTTTCTAATCAATCTTTTCTCTGCCAGAATGTTATCTATATCAATTGAATATGAATCATATCAAATACATATTACAGTTACTCGAAATTTGCTTAATGATTGAAGAAAGGACGAGGGTTGAATTAGTTCTGGACAAAATCATAAGATATGAGGCAACGGAAGGCCTCCCCTGATTTTATTTTCATCCTCTAGAATCTGATGGTCATGTTAAAGCTGGTTCTATAAAAAGGGAGGGTGAATCCATATGATAAGTGAAGTTCCCCCATTAGTTGATTGTATCGAACGTGTTACTATGCTTGCAGGATAATTACTGGAGCTTTATATGGTTGGTTTGATGTTGCTTTGATTCTTAAATCTTATCTGAAGGGTCTTTTATTCTTGGAAATCTGATGGCTTCAAATTTTTAGTTTTATCTTTTCAAGGGACTGTCTATTTGCTATTGGAGATTGAAATTCCCATTAGGAACGATTGCCTTTCTTGGTTTTGTTAGTACTTGTTCTAGTTTTAGTTTGCTTCCCTACTGGAGAAACTTGTGGTGATAATCAATCTGCATCCTTACATGAAAACTTGTGACCCTTTCGGATAATCCTATAGAAATAAGCAATTCTTCATATTTCCTTCTAGATTAATATTGACAAGTCATAATTGTCCAGATTGTATGAATCTGTAGATTACTTTTATTGTCTCCTTGAAAAAAGGATCATTGAAGTTATGCATACCTGCTCCCTTATATAGTTATATGCTTTGTTGTTATACAGTTTATTCTCACGTGCTTTGTTGGAGGTTTAGATCACTGGGTCAGAACACATACAATTTTTTAGTGTAATCATAGAATACTGAAGTTTTATGATTCTAAAGCTGAATTGTCACTGAAAACAGAGATCATGTATTGAAATATGTGTTGAAACTGGCACCTAATTAGTTGTTACATTTGTATGAAGGTCCCATGGCACTGTAGGAGTATTGAGCTCAGGTAGTTGTTTGTGTTTGGGGTGTTTGTGACTTGCCTGATATATGAATAAACTACAGGAGATTCTTACTGTGAACATTTGTCGCTGCCCTTAACAGATAGTTTTTGACACTGGCTAACCAGTAACCTTTTGTTTCTTTTCTTTTGTGTTTCCGCGTTTCCTAGTTGGGGTTCAAATTTTTTTCGTTTTCTTTTATTTTTTCGCTCTGTCATAGTTAGTGCACAACTATGTCTAACTTCCTATTGTTTAAGACATAAGCCGAGTCTGATGGCGTGTTTACTAGTCTTAGGGGGTTGATTAGAAAAATATAATTCTGGACCTTGTCGCTGTCGCCCAATTTGTTGTATGCAAATGAATAGAAATACAGAATTGTTCTCTGTCCGCTTGTCATTGCAGAATGACTAAACAACTTCAACTTGTAATTTGCATTATAATTTTAGTCGCTCAACTAGCCAAAGTGGACCTTGACTGAGCCTTAGCCTTTTCTCTTCTACTTGGTACCCTTTTTCCTACTATTTAACTCGCAGGTGGTTGAAAATTCAATGGGAGTTTTTTCTTCAACATTATTTGATTTTTGAAACTTTCTGTGGGAATAAATCATCTGGCTACGTTCATACTTCATAATGCTTGGATTTATACACTCATATAGAAGTTGTTGATGTTGGAGTTGTTTTAGATGTTGGTGAGGACATTATGATATAGGAGTAGTTTGGTAGCTATTTTTTGTTTTGACAGCTTTGTATTAGCAATTATTTGGATTTGTAGTTACCACTTAGAAGCTCCTTTTTTGCTTCCTTCAATTCAGATCAACCTTTTTCTATTTAGGTATCGGGCGATAACCAGCGCTTACTACCGAGGAGCAGTAGGTGCTTTGCTCGTGTACGATGTCACTCGACGTGCAACATTTGAGAATGCTGCAAGATGGTTAAAGGAATTGAGGGATCACACAGACCCGAACATGGTAGTGATGCTCATCGGCAACAAATCCGACTTACAGCACCTCATTCTAGTTCCAACAGAAGATGGAAAATCATTTGCAGAGAGGGAGTCTTTGTACTTCATGGAGACCTCAGCACTGGATGCAACAAATGTTGAAAATGCTTTCACAGAGGTGCTCTCTCAAATCTACCGAATCGTGAGCAAGAGATCAGTCGAGGCAGGCGACAGTGGAAATGTTTCGACCGTTCCACCAAAAGGTCAGACAATCGATGTCAAGGATGACTCGTCGGTTCTGAAGAGGATCGGGTGTTGCTCAAACTAA

mRNA sequence

ATGGCTGGTTATAAAGGTCAAGATGAATATGATTACCTGTTTAAGTTGGTTTTGATCGGTGATTCTGGGGTGGGAAAATCAAACCTGCTTTCGAGGTTTACGAGGAACCAATTTAATTTAGAATCGAAGTCTACTATTGGGGTTGAGTTTGCTACCAAGAGTTTGGAAATTGATGGGAAGGTAATCAAGGCTCAGATTTGGGACACTGCTGGACAAGAAAGGTATCGGGCGATAACCAGCGCTTACTACCGAGGAGCAGTAGGTGCTTTGCTCGTGTACGATGTCACTCGACGTGCAACATTTGAGAATGCTGCAAGATGGTTAAAGGAATTGAGGGATCACACAGACCCGAACATGGTAGTGATGCTCATCGGCAACAAATCCGACTTACAGCACCTCATTCTAGTTCCAACAGAAGATGGAAAATCATTTGCAGAGAGGGAGTCTTTGTACTTCATGGAGACCTCAGCACTGGATGCAACAAATGTTGAAAATGCTTTCACAGAGGTGCTCTCTCAAATCTACCGAATCGTGAGCAAGAGATCAGTCGAGGCAGGCGACAGTGGAAATGTTTCGACCGTTCCACCAAAAGGTCAGACAATCGATGTCAAGGATGACTCGTCGGTTCTGAAGAGGATCGGGTGTTGCTCAAACTAA

Coding sequence (CDS)

ATGGCTGGTTATAAAGGTCAAGATGAATATGATTACCTGTTTAAGTTGGTTTTGATCGGTGATTCTGGGGTGGGAAAATCAAACCTGCTTTCGAGGTTTACGAGGAACCAATTTAATTTAGAATCGAAGTCTACTATTGGGGTTGAGTTTGCTACCAAGAGTTTGGAAATTGATGGGAAGGTAATCAAGGCTCAGATTTGGGACACTGCTGGACAAGAAAGGTATCGGGCGATAACCAGCGCTTACTACCGAGGAGCAGTAGGTGCTTTGCTCGTGTACGATGTCACTCGACGTGCAACATTTGAGAATGCTGCAAGATGGTTAAAGGAATTGAGGGATCACACAGACCCGAACATGGTAGTGATGCTCATCGGCAACAAATCCGACTTACAGCACCTCATTCTAGTTCCAACAGAAGATGGAAAATCATTTGCAGAGAGGGAGTCTTTGTACTTCATGGAGACCTCAGCACTGGATGCAACAAATGTTGAAAATGCTTTCACAGAGGTGCTCTCTCAAATCTACCGAATCGTGAGCAAGAGATCAGTCGAGGCAGGCGACAGTGGAAATGTTTCGACCGTTCCACCAAAAGGTCAGACAATCGATGTCAAGGATGACTCGTCGGTTCTGAAGAGGATCGGGTGTTGCTCAAACTAA

Protein sequence

MAGYKGQDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNMVVMLIGNKSDLQHLILVPTEDGKSFAERESLYFMETSALDATNVENAFTEVLSQIYRIVSKRSVEAGDSGNVSTVPPKGQTIDVKDDSSVLKRIGCCSN

Homology

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BLAST of MS028340 vs. NCBI nr
Match: XP_022147891.1 (ras-related protein Rab11D [Momordica charantia])

HSP 1 Score: 431.0 bits (1107), Expect = 6.0e-117
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0


Query: 1   MAGYKGQDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGYKGQDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK
Sbjct: 1   MAGYKGQDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNMV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNMV 120

Query: 121 VMLIGNKSDLQHLILVPTEDGKSFAERESLYFMETSALDATNVENAFTEVLSQIYRIVSK 180
           VMLIGNKSDLQHLILVPTEDGKSFAERESLYFMETSALDATNVENAFTEVLSQIYRIVSK
Sbjct: 121 VMLIGNKSDLQHLILVPTEDGKSFAERESLYFMETSALDATNVENAFTEVLSQIYRIVSK 180

Query: 181 RSVEAGDSGNVSTVPPKGQTIDVKDDSSVLKRIGCCSN 219
           RSVEAGDSGNVSTVPPKGQTIDVKDDSSVLKRIGCCSN
Sbjct: 181 RSVEAGDSGNVSTVPPKGQTIDVKDDSSVLKRIGCCSN 218

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BLAST of MS028340 vs. NCBI nr
Match: XP_008455291.1 (PREDICTED: ras-related protein Rab11D [Cucumis melo])

HSP 1 Score: 406.0 bits (1042), Expect = 2.1e-109
Identity = 206/219 (94.06%), Postives = 213/219 (97.26%), Query Frame = 0


Query: 1   MAGYKGQDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGYKG DEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK
Sbjct: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRR TFENAARWLKELR+HTDPNMV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRNHTDPNMV 120

Query: 121 VMLIGNKSDLQHLILVPTEDGKSFAERESLYFMETSALDATNVENAFTEVLSQIYRIVSK 180
           VMLIGNK DL+HL+LVPTEDGKSFAERESLYFMETSALDATNVE+AFTEVLSQIYRIVSK
Sbjct: 121 VMLIGNKCDLRHLVLVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180

Query: 181 RSVEAGDSGNVS-TVPPKGQTIDVKDDSSVLKRIGCCSN 219
           RSVEAGD G+ S T+PPKGQTIDVKDDSSVLKRIGCCS+
Sbjct: 181 RSVEAGDIGSASMTLPPKGQTIDVKDDSSVLKRIGCCSS 219

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BLAST of MS028340 vs. NCBI nr
Match: XP_004136835.1 (ras-related protein Rab11D [Cucumis sativus] >KGN43636.1 hypothetical protein Csa_017337 [Cucumis sativus])

HSP 1 Score: 405.2 bits (1040), Expect = 3.5e-109
Identity = 207/219 (94.52%), Postives = 212/219 (96.80%), Query Frame = 0


Query: 1   MAGYKGQDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGYKG DEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK
Sbjct: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRR TFENAARWLKELRDHTDPNMV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120

Query: 121 VMLIGNKSDLQHLILVPTEDGKSFAERESLYFMETSALDATNVENAFTEVLSQIYRIVSK 180
           VMLIGNK DL+HLILVPTEDGKSFAERESLYFMETSALDATNVE+AFTEVLSQIYRIVSK
Sbjct: 121 VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180

Query: 181 RSVEAGDSGNVS-TVPPKGQTIDVKDDSSVLKRIGCCSN 219
           RSVEAGD G+ S T+P KGQTIDVKDDSSVLKRIGCCS+
Sbjct: 181 RSVEAGDIGSASTTLPSKGQTIDVKDDSSVLKRIGCCSS 219

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BLAST of MS028340 vs. NCBI nr
Match: KAA0031553.1 (ras-related protein Rab11D [Cucumis melo var. makuwa] >TYK07006.1 ras-related protein Rab11D [Cucumis melo var. makuwa])

HSP 1 Score: 405.2 bits (1040), Expect = 3.5e-109
Identity = 207/219 (94.52%), Postives = 212/219 (96.80%), Query Frame = 0


Query: 1   MAGYKGQDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGYKG DEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK
Sbjct: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRR TFENAARWLKELRDHTDPNMV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120

Query: 121 VMLIGNKSDLQHLILVPTEDGKSFAERESLYFMETSALDATNVENAFTEVLSQIYRIVSK 180
           VMLIGNK DL+HLILVPTEDGKSFAERESLYFMETSALDATNVE+AFTEVLSQIYRIVSK
Sbjct: 121 VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180

Query: 181 RSVEAGDSGNVS-TVPPKGQTIDVKDDSSVLKRIGCCSN 219
           RSVEAGD G+ S T+P KGQTIDVKDDSSVLKRIGCCS+
Sbjct: 181 RSVEAGDIGSASMTLPSKGQTIDVKDDSSVLKRIGCCSS 219

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BLAST of MS028340 vs. NCBI nr
Match: RDX74178.1 (Ras-related protein Rab11D, partial [Mucuna pruriens])

HSP 1 Score: 402.5 bits (1033), Expect = 2.3e-108
Identity = 201/218 (92.20%), Postives = 211/218 (96.79%), Query Frame = 0


Query: 1   MAGYKGQDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGYKG DEYDYLFKLVLIGDSGVGKSNLLSRFTRN+FNLESKSTIGVEFATKSL ID K
Sbjct: 55  MAGYKGDDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDSK 114

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPN+V
Sbjct: 115 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIV 174

Query: 121 VMLIGNKSDLQHLILVPTEDGKSFAERESLYFMETSALDATNVENAFTEVLSQIYRIVSK 180
           VMLIGNKSDL+HL+ VPTEDGKSFAE+ESLYFMETSAL+ATNVENAFTEVLSQIYRIVSK
Sbjct: 175 VMLIGNKSDLRHLVAVPTEDGKSFAEKESLYFMETSALEATNVENAFTEVLSQIYRIVSK 234

Query: 181 RSVEAGDSGNVSTVPPKGQTIDVKDDSSVLKRIGCCSN 219
           R+VEAGD+G  STVP KGQTI+VKDDSSVLK+IGCCSN
Sbjct: 235 RAVEAGDNGGSSTVPSKGQTINVKDDSSVLKKIGCCSN 272

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BLAST of MS028340 vs. ExPASy Swiss-Prot
Match: Q40194 (Ras-related protein Rab11D OS=Lotus japonicus OX=34305 GN=RAB11D PE=2 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 1.3e-106
Identity = 191/217 (88.02%), Postives = 207/217 (95.39%), Query Frame = 0


Query: 1   MAGYKGQDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           M GY+  DEYDYLFKLVLIGDSGVGKSNLLSRFT+N+FNLESKSTIGVEFATK+L +D K
Sbjct: 1   MGGYRTDDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTLNVDAK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNMV 120
           V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPN+V
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIV 120

Query: 121 VMLIGNKSDLQHLILVPTEDGKSFAERESLYFMETSALDATNVENAFTEVLSQIYRIVSK 180
           VMLIGNKSDL+HL+ VPTEDGKSFAERESLYFMETSAL+ATNVENAFTEVL+QIYRIVSK
Sbjct: 121 VMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLTQIYRIVSK 180

Query: 181 RSVEAGDSGNVSTVPPKGQTIDVKDDSSVLKRIGCCS 218
           R+VEAGDSG+ S +P KGQTI+VK+DSSVLKR GCCS
Sbjct: 181 RAVEAGDSGSSSGLPSKGQTINVKEDSSVLKRFGCCS 217

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BLAST of MS028340 vs. ExPASy Swiss-Prot
Match: Q40195 (Ras-related protein Rab11E OS=Lotus japonicus OX=34305 GN=RAB11E PE=2 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 3.3e-102
Identity = 186/218 (85.32%), Postives = 200/218 (91.74%), Query Frame = 0


Query: 1   MAGYKGQDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGYK  DEYDYLFKLVLIGDSGVGKSNLLSRFTRN+FNLESKSTIGVEFATKSL IDGK
Sbjct: 1   MAGYKADDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR  TFE A RWLKELRDHTDPN+V
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIV 120

Query: 121 VMLIGNKSDLQHLILVPTEDGKSFAERESLYFMETSALDATNVENAFTEVLSQIYRIVSK 180
           VMLIGNKSDL+HL+ V TEDGK+FAE+ESLYFMETSAL+ATNVENAF+EVL+QIYRIVSK
Sbjct: 121 VMLIGNKSDLRHLVTVSTEDGKAFAEKESLYFMETSALEATNVENAFSEVLTQIYRIVSK 180

Query: 181 RSVEAGDSGNVSTVPPKGQTIDVKDDSSVLKRIGCCSN 219
           R+VEAGD  + S VP +GQTI+V +DSSVL R  CCSN
Sbjct: 181 RAVEAGDRPSTSVVPSQGQTINVNEDSSVLNRYRCCSN 218

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BLAST of MS028340 vs. ExPASy Swiss-Prot
Match: Q01111 (Ras-related protein YPT3 OS=Nicotiana plumbaginifolia OX=4092 GN=YPT3 PE=2 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 1.0e-98
Identity = 175/218 (80.28%), Postives = 195/218 (89.45%), Query Frame = 0


Query: 1   MAGYKGQDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGY+  DEYDYLFKLVLIGDSGVGKSNLLSRFT+N+FNLESKSTIGVEFATKSL ID K
Sbjct: 1   MAGYRADDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDNK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR  T+EN  RWLKELRDHTDPN+V
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTYENVTRWLKELRDHTDPNIV 120

Query: 121 VMLIGNKSDLQHLILVPTEDGKSFAERESLYFMETSALDATNVENAFTEVLSQIYRIVSK 180
           VMLIGNKSDL+HL+ V T++ K  AERE LYFMETSAL+ATNVENAFTE L+QIYRIVSK
Sbjct: 121 VMLIGNKSDLRHLVAVSTDEAKGLAEREGLYFMETSALEATNVENAFTEALTQIYRIVSK 180

Query: 181 RSVEAGDSGNVSTVPPKGQTIDVKDDSSVLKRIGCCSN 219
           ++VEAGD G  S+ PPKG+TI++KD+ S  K+ GCCS+
Sbjct: 181 KAVEAGDEGATSSAPPKGETINIKDEGSSWKKFGCCSS 218

[Close]

BLAST of MS028340 vs. ExPASy Swiss-Prot
Match: P28185 (Ras-related protein RABA1a OS=Arabidopsis thaliana OX=3702 GN=RABA1A PE=1 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 8.5e-98
Identity = 175/218 (80.28%), Postives = 201/218 (92.20%), Query Frame = 0


Query: 1   MAGYKGQDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGY+  +EYDYLFKLVLIGDSGVGKSNLLSRFT+N+FNLESKSTIGVEFATK+ +++GK
Sbjct: 1   MAGYRADEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNMV 120
           V+KAQIWDTAGQERYRAITSAYYRGAVGALL+YDVTR ATFENAARWL+ELR HTDPN+V
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIV 120

Query: 121 VMLIGNKSDLQHLILVPTEDGKSFAERESLYFMETSALDATNVENAFTEVLSQIYRIVSK 180
           VMLIGNK DL+HL+ V TE+ K+FAERESLYFMETSALDATNVENAFTEVL+QI++IVSK
Sbjct: 121 VMLIGNKCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIVSK 180

Query: 181 RSVEAGDSGNVSTVPPKGQTIDVKDDSSVLKRIGCCSN 219
           RSV+ G  G  + +P KG+TI+VK+D SVLKR+GCCSN
Sbjct: 181 RSVDGG--GESADLPGKGETINVKEDGSVLKRMGCCSN 216

[Close]

BLAST of MS028340 vs. ExPASy Swiss-Prot
Match: Q39222 (Ras-related protein RABA1b OS=Arabidopsis thaliana OX=3702 GN=RABA1B PE=1 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 1.1e-97
Identity = 173/218 (79.36%), Postives = 202/218 (92.66%), Query Frame = 0


Query: 1   MAGYKGQDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGY+ +D+YDYLFK+VLIGDSGVGKSNLLSRFT+N+FNLESKSTIGVEFAT++L++DGK
Sbjct: 1   MAGYRVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNMV 120
           V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFEN  RWLKEL++HTDPN+V
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIV 120

Query: 121 VMLIGNKSDLQHLILVPTEDGKSFAERESLYFMETSALDATNVENAFTEVLSQIYRIVSK 180
           VML+GNKSDL+HL+ VPTEDGKS+AE+ESL FMETSAL+ATNVE+AF EVL+QIYRI SK
Sbjct: 121 VMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSK 180

Query: 181 RSVEAGDSGNVSTVPPKGQTIDVKDDSSVLKRIGCCSN 219
           + VEAG+ GN S   PKG+ I+VK+D S LK++GCCSN
Sbjct: 181 KQVEAGEDGNASV--PKGEKIEVKNDVSALKKLGCCSN 216

[Close]

BLAST of MS028340 vs. ExPASy TrEMBL
Match: A0A6J1D3Q3 (ras-related protein Rab11D OS=Momordica charantia OX=3673 GN=LOC111016716 PE=4 SV=1)

HSP 1 Score: 431.0 bits (1107), Expect = 2.9e-117
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0


Query: 1   MAGYKGQDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGYKGQDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK
Sbjct: 1   MAGYKGQDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNMV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNMV 120

Query: 121 VMLIGNKSDLQHLILVPTEDGKSFAERESLYFMETSALDATNVENAFTEVLSQIYRIVSK 180
           VMLIGNKSDLQHLILVPTEDGKSFAERESLYFMETSALDATNVENAFTEVLSQIYRIVSK
Sbjct: 121 VMLIGNKSDLQHLILVPTEDGKSFAERESLYFMETSALDATNVENAFTEVLSQIYRIVSK 180

Query: 181 RSVEAGDSGNVSTVPPKGQTIDVKDDSSVLKRIGCCSN 219
           RSVEAGDSGNVSTVPPKGQTIDVKDDSSVLKRIGCCSN
Sbjct: 181 RSVEAGDSGNVSTVPPKGQTIDVKDDSSVLKRIGCCSN 218

[Close]

BLAST of MS028340 vs. ExPASy TrEMBL
Match: A0A1S3C059 (ras-related protein Rab11D OS=Cucumis melo OX=3656 GN=LOC103495492 PE=4 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 1.0e-109
Identity = 206/219 (94.06%), Postives = 213/219 (97.26%), Query Frame = 0


Query: 1   MAGYKGQDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGYKG DEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK
Sbjct: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRR TFENAARWLKELR+HTDPNMV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRNHTDPNMV 120

Query: 121 VMLIGNKSDLQHLILVPTEDGKSFAERESLYFMETSALDATNVENAFTEVLSQIYRIVSK 180
           VMLIGNK DL+HL+LVPTEDGKSFAERESLYFMETSALDATNVE+AFTEVLSQIYRIVSK
Sbjct: 121 VMLIGNKCDLRHLVLVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180

Query: 181 RSVEAGDSGNVS-TVPPKGQTIDVKDDSSVLKRIGCCSN 219
           RSVEAGD G+ S T+PPKGQTIDVKDDSSVLKRIGCCS+
Sbjct: 181 RSVEAGDIGSASMTLPPKGQTIDVKDDSSVLKRIGCCSS 219

[Close]

BLAST of MS028340 vs. ExPASy TrEMBL
Match: A0A5A7SMX1 (Ras-related protein Rab11D OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003220 PE=4 SV=1)

HSP 1 Score: 405.2 bits (1040), Expect = 1.7e-109
Identity = 207/219 (94.52%), Postives = 212/219 (96.80%), Query Frame = 0


Query: 1   MAGYKGQDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGYKG DEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK
Sbjct: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRR TFENAARWLKELRDHTDPNMV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120

Query: 121 VMLIGNKSDLQHLILVPTEDGKSFAERESLYFMETSALDATNVENAFTEVLSQIYRIVSK 180
           VMLIGNK DL+HLILVPTEDGKSFAERESLYFMETSALDATNVE+AFTEVLSQIYRIVSK
Sbjct: 121 VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180

Query: 181 RSVEAGDSGNVS-TVPPKGQTIDVKDDSSVLKRIGCCSN 219
           RSVEAGD G+ S T+P KGQTIDVKDDSSVLKRIGCCS+
Sbjct: 181 RSVEAGDIGSASMTLPSKGQTIDVKDDSSVLKRIGCCSS 219

[Close]

BLAST of MS028340 vs. ExPASy TrEMBL
Match: A0A0A0K737 (Small GTP-binding protein OS=Cucumis sativus OX=3659 GN=Csa_7G049180 PE=4 SV=1)

HSP 1 Score: 405.2 bits (1040), Expect = 1.7e-109
Identity = 207/219 (94.52%), Postives = 212/219 (96.80%), Query Frame = 0


Query: 1   MAGYKGQDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGYKG DEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK
Sbjct: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRR TFENAARWLKELRDHTDPNMV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120

Query: 121 VMLIGNKSDLQHLILVPTEDGKSFAERESLYFMETSALDATNVENAFTEVLSQIYRIVSK 180
           VMLIGNK DL+HLILVPTEDGKSFAERESLYFMETSALDATNVE+AFTEVLSQIYRIVSK
Sbjct: 121 VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180

Query: 181 RSVEAGDSGNVS-TVPPKGQTIDVKDDSSVLKRIGCCSN 219
           RSVEAGD G+ S T+P KGQTIDVKDDSSVLKRIGCCS+
Sbjct: 181 RSVEAGDIGSASTTLPSKGQTIDVKDDSSVLKRIGCCSS 219

[Close]

BLAST of MS028340 vs. ExPASy TrEMBL
Match: A0A371F7A7 (Ras-related protein Rab11D (Fragment) OS=Mucuna pruriens OX=157652 GN=RAB11D PE=4 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 1.1e-108
Identity = 201/218 (92.20%), Postives = 211/218 (96.79%), Query Frame = 0


Query: 1   MAGYKGQDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGYKG DEYDYLFKLVLIGDSGVGKSNLLSRFTRN+FNLESKSTIGVEFATKSL ID K
Sbjct: 55  MAGYKGDDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDSK 114

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPN+V
Sbjct: 115 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIV 174

Query: 121 VMLIGNKSDLQHLILVPTEDGKSFAERESLYFMETSALDATNVENAFTEVLSQIYRIVSK 180
           VMLIGNKSDL+HL+ VPTEDGKSFAE+ESLYFMETSAL+ATNVENAFTEVLSQIYRIVSK
Sbjct: 175 VMLIGNKSDLRHLVAVPTEDGKSFAEKESLYFMETSALEATNVENAFTEVLSQIYRIVSK 234

Query: 181 RSVEAGDSGNVSTVPPKGQTIDVKDDSSVLKRIGCCSN 219
           R+VEAGD+G  STVP KGQTI+VKDDSSVLK+IGCCSN
Sbjct: 235 RAVEAGDNGGSSTVPSKGQTINVKDDSSVLKKIGCCSN 272

[Close]

BLAST of MS028340 vs. TAIR 10
Match: AT1G06400.1 (Ras-related small GTP-binding family protein )

HSP 1 Score: 357.8 bits (917), Expect = 6.0e-99
Identity = 175/218 (80.28%), Postives = 201/218 (92.20%), Query Frame = 0


Query: 1   MAGYKGQDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGY+  +EYDYLFKLVLIGDSGVGKSNLLSRFT+N+FNLESKSTIGVEFATK+ +++GK
Sbjct: 1   MAGYRADEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNMV 120
           V+KAQIWDTAGQERYRAITSAYYRGAVGALL+YDVTR ATFENAARWL+ELR HTDPN+V
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIV 120

Query: 121 VMLIGNKSDLQHLILVPTEDGKSFAERESLYFMETSALDATNVENAFTEVLSQIYRIVSK 180
           VMLIGNK DL+HL+ V TE+ K+FAERESLYFMETSALDATNVENAFTEVL+QI++IVSK
Sbjct: 121 VMLIGNKCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIVSK 180

Query: 181 RSVEAGDSGNVSTVPPKGQTIDVKDDSSVLKRIGCCSN 219
           RSV+ G  G  + +P KG+TI+VK+D SVLKR+GCCSN
Sbjct: 181 RSVDGG--GESADLPGKGETINVKEDGSVLKRMGCCSN 216

[Close]

BLAST of MS028340 vs. TAIR 10
Match: AT1G16920.1 (RAB GTPase homolog A1B )

HSP 1 Score: 357.5 bits (916), Expect = 7.9e-99
Identity = 173/218 (79.36%), Postives = 202/218 (92.66%), Query Frame = 0


Query: 1   MAGYKGQDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGY+ +D+YDYLFK+VLIGDSGVGKSNLLSRFT+N+FNLESKSTIGVEFAT++L++DGK
Sbjct: 1   MAGYRVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNMV 120
           V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFEN  RWLKEL++HTDPN+V
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIV 120

Query: 121 VMLIGNKSDLQHLILVPTEDGKSFAERESLYFMETSALDATNVENAFTEVLSQIYRIVSK 180
           VML+GNKSDL+HL+ VPTEDGKS+AE+ESL FMETSAL+ATNVE+AF EVL+QIYRI SK
Sbjct: 121 VMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSK 180

Query: 181 RSVEAGDSGNVSTVPPKGQTIDVKDDSSVLKRIGCCSN 219
           + VEAG+ GN S   PKG+ I+VK+D S LK++GCCSN
Sbjct: 181 KQVEAGEDGNASV--PKGEKIEVKNDVSALKKLGCCSN 216

[Close]

BLAST of MS028340 vs. TAIR 10
Match: AT4G18800.1 (RAB GTPase homolog A1D )

HSP 1 Score: 341.3 bits (874), Expect = 5.8e-94
Identity = 171/219 (78.08%), Postives = 196/219 (89.50%), Query Frame = 0


Query: 1   MAGYKGQDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGY+  D+YDYLFK+VLIGDSGVGKSNLLSRFTRN+F+LESKSTIGVEFAT+SL ++ K
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR +TFEN  RWL+ELRDHTDPN+V
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120

Query: 121 VMLIGNKSDLQHLILVPTEDGKSFAERESLYFMETSALDATNVENAFTEVLSQIYRIVSK 180
           VML+GNKSDL+HL+ V TED KSFAE ESLYFMETSAL++TNVENAF+EVL+QIY +VSK
Sbjct: 121 VMLVGNKSDLRHLVAVQTEDAKSFAENESLYFMETSALESTNVENAFSEVLTQIYHVVSK 180

Query: 181 RSVEAG-DSGNVSTVPPKGQTIDVKDDSSVLKRIGCCSN 219
           +++EAG DSGN   VP KG+ IDV  D S +K+ GCCSN
Sbjct: 181 KAMEAGEDSGN---VPSKGEKIDV--DVSAVKKTGCCSN 214

[Close]

BLAST of MS028340 vs. TAIR 10
Match: AT5G45750.1 (RAB GTPase homolog A1C )

HSP 1 Score: 336.3 bits (861), Expect = 1.9e-92
Identity = 166/218 (76.15%), Postives = 190/218 (87.16%), Query Frame = 0


Query: 1   MAGYKGQDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGY+  DEYDYLFK+VLIGDSGVGKSNLLSRFT+N+F+LESKSTIGVEFAT+SL +D K
Sbjct: 1   MAGYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR +TFEN   WLKELR+HTDPN+V
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIV 120

Query: 121 VMLIGNKSDLQHLILVPTEDGKSFAERESLYFMETSALDATNVENAFTEVLSQIYRIVSK 180
           VML+GNKSDL+HL+ V TED KSFAE+ESLYFMETSAL+ATNVENAF EVL+QI+ IVSK
Sbjct: 121 VMLVGNKSDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSK 180

Query: 181 RSVEAGDSGNVSTVPPKGQTIDVKDDSSVLKRIGCCSN 219
           +++EA      + VP KG  ID+  D S +K+ GCCSN
Sbjct: 181 KAMEAASES--ANVPSKGDKIDIGKDVSAVKKGGCCSN 216

[Close]

BLAST of MS028340 vs. TAIR 10
Match: AT5G60860.1 (RAB GTPase homolog A1F )

HSP 1 Score: 330.1 bits (845), Expect = 1.3e-90
Identity = 161/220 (73.18%), Postives = 190/220 (86.36%), Query Frame = 0


Query: 1   MAGYKGQDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MA Y+  DEYDYLFK+VLIGDSGVGKSNLLSRFTRN+F+LESKSTIGVEFAT+S+ +D K
Sbjct: 1   MAAYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNMV 120
           ++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR  TFEN  RWLKELRDHTD N+V
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120

Query: 121 VMLIGNKSDLQHLILVPTEDGKSFAERESLYFMETSALDATNVENAFTEVLSQIYRIVSK 180
           +M +GNK+DL+HL  V TED K+FAERE+ +FMETSAL++ NVENAFTEVLSQIYR+VS+
Sbjct: 121 IMFVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSR 180

Query: 181 RSVEAGDSGNVSTVPPKGQTIDV--KDDSSVLKRIGCCSN 219
           ++++ GD        PKGQTI+V  KDD S +K++GCCSN
Sbjct: 181 KALDIGDD---PAALPKGQTINVGSKDDVSAVKKVGCCSN 217

The following BLAST results are available for this feature:

BLAST of MS028340 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022147891.1	6.0e-117	100.00	ras-related protein Rab11D [Momordica charantia]	[more]
XP_008455291.1	2.1e-109	94.06	PREDICTED: ras-related protein Rab11D [Cucumis melo]	[more]
XP_004136835.1	3.5e-109	94.52	ras-related protein Rab11D [Cucumis sativus] >KGN43636.1 hypothetical protein Cs...	[more]
KAA0031553.1	3.5e-109	94.52	ras-related protein Rab11D [Cucumis melo var. makuwa] >TYK07006.1 ras-related pr...	[more]
RDX74178.1	2.3e-108	92.20	Ras-related protein Rab11D, partial [Mucuna pruriens]	[more]

BLAST of MS028340 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q40194	1.3e-106	88.02	Ras-related protein Rab11D OS=Lotus japonicus OX=34305 GN=RAB11D PE=2 SV=1	[more]
Q40195	3.3e-102	85.32	Ras-related protein Rab11E OS=Lotus japonicus OX=34305 GN=RAB11E PE=2 SV=1	[more]
Q01111	1.0e-98	80.28	Ras-related protein YPT3 OS=Nicotiana plumbaginifolia OX=4092 GN=YPT3 PE=2 SV=1	[more]
P28185	8.5e-98	80.28	Ras-related protein RABA1a OS=Arabidopsis thaliana OX=3702 GN=RABA1A PE=1 SV=1	[more]
Q39222	1.1e-97	79.36	Ras-related protein RABA1b OS=Arabidopsis thaliana OX=3702 GN=RABA1B PE=1 SV=1	[more]

BLAST of MS028340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D3Q3	2.9e-117	100.00	ras-related protein Rab11D OS=Momordica charantia OX=3673 GN=LOC111016716 PE=4 S...	[more]
A0A1S3C059	1.0e-109	94.06	ras-related protein Rab11D OS=Cucumis melo OX=3656 GN=LOC103495492 PE=4 SV=1	[more]
A0A5A7SMX1	1.7e-109	94.52	Ras-related protein Rab11D OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A0A0K737	1.7e-109	94.52	Small GTP-binding protein OS=Cucumis sativus OX=3659 GN=Csa_7G049180 PE=4 SV=1	[more]
A0A371F7A7	1.1e-108	92.20	Ras-related protein Rab11D (Fragment) OS=Mucuna pruriens OX=157652 GN=RAB11D PE=...	[more]

BLAST of MS028340 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G06400.1	6.0e-99	80.28	Ras-related small GTP-binding family protein	[more]
AT1G16920.1	7.9e-99	79.36	RAB GTPase homolog A1B	[more]
AT4G18800.1	5.8e-94	78.08	RAB GTPase homolog A1D	[more]
AT5G45750.1	1.9e-92	76.15	RAB GTPase homolog A1C	[more]
AT5G60860.1	1.3e-90	73.18	RAB GTPase homolog A1F	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 37..53 score: 35.85 coord: 152..174 score: 41.38 coord: 14..35 score: 56.68 coord: 117..130 score: 49.49 coord: 55..77 score: 55.43
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 14..177 e-value: 3.5E-110 score: 382.0
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 19..210 e-value: 1.1E-4 score: 17.5
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 11..177 e-value: 1.7E-26 score: 104.0
None	No IPR available	PANTHER	PTHR47979:SF27	RAS-RELATED PROTEIN RIC2	coord: 1..218
None	No IPR available	PANTHER	PTHR47979	DRAB11-RELATED	coord: 1..218
None	No IPR available	PROSITE	PS51420	RHO	coord: 7..178 score: 9.806087
None	No IPR available	PROSITE	PS51419	RAB	coord: 9..216 score: 35.533024
None	No IPR available	CDD	cd01868	Rab11_like	coord: 11..175 e-value: 1.37912E-126 score: 352.633
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 16..173 e-value: 1.5E-11 score: 28.4
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 15..175 e-value: 1.0E-60 score: 204.0
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 6..210 score: 16.346403
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 12..170 e-value: 9.4E-38 score: 127.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 6..216 e-value: 6.2E-70 score: 236.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 9..181

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS028340.1	MS028340.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding