MS028289 (gene) Bitter gourd (TR) v1

Overview


Name	MS028289
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	exopolygalacturonase-like
Location	scaffold47: 2522419 .. 2523998 (+)
RNA-Seq Expression	MS028289
Synteny	MS028289

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGATTGGGATCAAACTTTGTGGTACTACCATTGTCGTTATTGTTGGTGTCAATCGCTACTGCTGCTCCTGCTAAACCCGCTGCTCCTGTTGGTGGTTCTGGTGCTGCTCCTGCTGGTGGTGCTGGTGGTGTTTTCGATGTCGCAAAATATGGTGCCAAACCTAACGCTGATATTACTCAGGTAAGATTATAAAATTAGTTTGGTAGATCATTTTAATCAATACATAAAAAAAACAATTATGAGGCAATTCAACTTTTACAGGCAGTGGCAAATGCATGGAAGGAAGCATGTGCATCGACTAGTCCAAGTAAATTGTTGATTCCAAAAGGAAGTTACCAATTAAATGGAGCCAGCTTCAAAGGCCCTTGCAAGAGTGCCATTGAAATTCAGGTTGATGGAACATTACAAGCTCCGCCCCACCCAAAAGGAGAAGGGTGGATTATGTTGGAATATATTGATCAATTGACATTGTCGGGCACTGGAGTTTTTGATGGCCAGGGAAAAGCAGGTTGGGAAAAGAATGACTGTCACCTAAAGAAAATCTGTACCAAGCTTCCCATGGTAATTAGAATTCTAATTATAATAACCTTTTGTTTTTATTTTTTGATATCACGTATAATTAAACCAACATAATTATCTGCTTTTAACATTTTGTCTGTTTGAAATGAGCAGAGTTTGAAGTTCAATTTCGTCACTAATTCAGTAGTGAAGGACATAACTTCTTTGGATAGTAAGAATTTCCATATCAATCTTTTGGGCTGCAAGAATGTTACCTTTCAACATGTGACAATTAGTGCACCAGACCATAGCCCCAATACCGATGGAATTCACATAAGTAGTTCAGAAAATATTAACATTCTCAATACAAATATAGGAACCGGGGACGATTGTATTTCTGTGGGAGATAGTAACTCACAAATAACTATCAGCGATGTGACTTGTGGACCAGGACATGGCATTAGCATTGGAAGTTTGGGCAAGTACAGCAAGGAGAAAGATGTGATTGGAGTTTTTGTAAAAAAATGCAAATTAACTAGTACTACGAACGGTGTCAGGATCAAAACATGGCCAGATTCTGCTGGTGCATTCATAGCCTCTGACATGCACTTCGAAGATATTGAAATGGTTAATGTTAGCAATCCTGTCATTATAGACCAAGAATATTGTCCATGGAACCAGTGCAATCGAAAGGTATATGTATTAAAATTATGCCTTACCCATGTTCAATTTATTATTAAATTAAACGAGTACGGAGAAAGAAGTGCAAATATAAGTTATGTCTGTCAATAATGTATTTTCTATCTCTGTCTGTTTAGGTTCCATCAAAAATTAAGATCAGCAAAGTCAGCTTTAAGAATATAAGAGGCACTTCTGCTACTCCGGTTGCAGTCAAACTTGTTTGCAGCTCAAGTAATCCATGTGAGGGTGTGGAAGTTGCTGATATTAACCTTACATACAATGGAAAACAAGGACCAATTAAGTCTGAGTGTGCAAATGTGAAACCTACCATTACCGGACAACAAAATCCTAAAATTTGCGCTGAAGTTGCCCCTCCCAATGCTCCATCAACTGATTAA

mRNA sequence

ATGGGATTGGGATCAAACTTTGTGGTACTACCATTGTCGTTATTGTTGGTGTCAATCGCTACTGCTGCTCCTGCTAAACCCGCTGCTCCTGTTGGTGGTTCTGGTGCTGCTCCTGCTGGTGGTGCTGGTGGTGTTTTCGATGTCGCAAAATATGGTGCCAAACCTAACGCTGATATTACTCAGGCAGTGGCAAATGCATGGAAGGAAGCATGTGCATCGACTAGTCCAAGTAAATTGTTGATTCCAAAAGGAAGTTACCAATTAAATGGAGCCAGCTTCAAAGGCCCTTGCAAGAGTGCCATTGAAATTCAGGTTGATGGAACATTACAAGCTCCGCCCCACCCAAAAGGAGAAGGGTGGATTATGTTGGAATATATTGATCAATTGACATTGTCGGGCACTGGAGTTTTTGATGGCCAGGGAAAAGCAGGTTGGGAAAAGAATGACTGTCACCTAAAGAAAATCTGTACCAAGCTTCCCATGAGTTTGAAGTTCAATTTCGTCACTAATTCAGTAGTGAAGGACATAACTTCTTTGGATAGTAAGAATTTCCATATCAATCTTTTGGGCTGCAAGAATGTTACCTTTCAACATGTGACAATTAGTGCACCAGACCATAGCCCCAATACCGATGGAATTCACATAAGTAGTTCAGAAAATATTAACATTCTCAATACAAATATAGGAACCGGGGACGATTGTATTTCTGTGGGAGATAGTAACTCACAAATAACTATCAGCGATGTGACTTGTGGACCAGGACATGGCATTAGCATTGGAAGTTTGGGCAAGTACAGCAAGGAGAAAGATGTGATTGGAGTTTTTGTAAAAAAATGCAAATTAACTAGTACTACGAACGGTGTCAGGATCAAAACATGGCCAGATTCTGCTGGTGCATTCATAGCCTCTGACATGCACTTCGAAGATATTGAAATGGTTAATGTTAGCAATCCTGTCATTATAGACCAAGAATATTGTCCATGGAACCAGTGCAATCGAAAGGTTCCATCAAAAATTAAGATCAGCAAAGTCAGCTTTAAGAATATAAGAGGCACTTCTGCTACTCCGGTTGCAGTCAAACTTGTTTGCAGCTCAAGTAATCCATGTGAGGGTGTGGAAGTTGCTGATATTAACCTTACATACAATGGAAAACAAGGACCAATTAAGTCTGAGTGTGCAAATGTGAAACCTACCATTACCGGACAACAAAATCCTAAAATTTGCGCTGAAGTTGCCCCTCCCAATGCTCCATCAACTGATTAA

Coding sequence (CDS)

ATGGGATTGGGATCAAACTTTGTGGTACTACCATTGTCGTTATTGTTGGTGTCAATCGCTACTGCTGCTCCTGCTAAACCCGCTGCTCCTGTTGGTGGTTCTGGTGCTGCTCCTGCTGGTGGTGCTGGTGGTGTTTTCGATGTCGCAAAATATGGTGCCAAACCTAACGCTGATATTACTCAGGCAGTGGCAAATGCATGGAAGGAAGCATGTGCATCGACTAGTCCAAGTAAATTGTTGATTCCAAAAGGAAGTTACCAATTAAATGGAGCCAGCTTCAAAGGCCCTTGCAAGAGTGCCATTGAAATTCAGGTTGATGGAACATTACAAGCTCCGCCCCACCCAAAAGGAGAAGGGTGGATTATGTTGGAATATATTGATCAATTGACATTGTCGGGCACTGGAGTTTTTGATGGCCAGGGAAAAGCAGGTTGGGAAAAGAATGACTGTCACCTAAAGAAAATCTGTACCAAGCTTCCCATGAGTTTGAAGTTCAATTTCGTCACTAATTCAGTAGTGAAGGACATAACTTCTTTGGATAGTAAGAATTTCCATATCAATCTTTTGGGCTGCAAGAATGTTACCTTTCAACATGTGACAATTAGTGCACCAGACCATAGCCCCAATACCGATGGAATTCACATAAGTAGTTCAGAAAATATTAACATTCTCAATACAAATATAGGAACCGGGGACGATTGTATTTCTGTGGGAGATAGTAACTCACAAATAACTATCAGCGATGTGACTTGTGGACCAGGACATGGCATTAGCATTGGAAGTTTGGGCAAGTACAGCAAGGAGAAAGATGTGATTGGAGTTTTTGTAAAAAAATGCAAATTAACTAGTACTACGAACGGTGTCAGGATCAAAACATGGCCAGATTCTGCTGGTGCATTCATAGCCTCTGACATGCACTTCGAAGATATTGAAATGGTTAATGTTAGCAATCCTGTCATTATAGACCAAGAATATTGTCCATGGAACCAGTGCAATCGAAAGGTTCCATCAAAAATTAAGATCAGCAAAGTCAGCTTTAAGAATATAAGAGGCACTTCTGCTACTCCGGTTGCAGTCAAACTTGTTTGCAGCTCAAGTAATCCATGTGAGGGTGTGGAAGTTGCTGATATTAACCTTACATACAATGGAAAACAAGGACCAATTAAGTCTGAGTGTGCAAATGTGAAACCTACCATTACCGGACAACAAAATCCTAAAATTTGCGCTGAAGTTGCCCCTCCCAATGCTCCATCAACTGATTAA

Protein sequence

MGLGSNFVVLPLSLLLVSIATAAPAKPAAPVGGSGAAPAGGAGGVFDVAKYGAKPNADITQAVANAWKEACASTSPSKLLIPKGSYQLNGASFKGPCKSAIEIQVDGTLQAPPHPKGEGWIMLEYIDQLTLSGTGVFDGQGKAGWEKNDCHLKKICTKLPMSLKFNFVTNSVVKDITSLDSKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHISSSENINILNTNIGTGDDCISVGDSNSQITISDVTCGPGHGISIGSLGKYSKEKDVIGVFVKKCKLTSTTNGVRIKTWPDSAGAFIASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVAVKLVCSSSNPCEGVEVADINLTYNGKQGPIKSECANVKPTITGQQNPKICAEVAPPNAPSTD

Homology

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BLAST of MS028289 vs. NCBI nr
Match: XP_022136075.1 (exopolygalacturonase-like [Momordica charantia])

HSP 1 Score: 813.9 bits (2101), Expect = 6.4e-232
Identity = 406/420 (96.67%), Postives = 410/420 (97.62%), Query Frame = 0


Query: 1   MGLGSNFVVLPLSLLLVSIATAAPAKPAAPVGGSGAAPAGGAGGVFDVAKYGAKPNADIT 60
           MGLGSNFVVLPLSLLLVSIATAAPAKP        AAP GGAGGVFDVAKYGAKPNADIT
Sbjct: 1   MGLGSNFVVLPLSLLLVSIATAAPAKP--------AAPTGGAGGVFDVAKYGAKPNADIT 60

Query: 61  QAVANAWKEACASTSPSKLLIPKGSYQLNGASFKGPCKSAIEIQVDGTLQAPPHPKGEGW 120
           QAVA+AWKEACASTSPSKLLIPKGSYQL GASF+GPCKSAI+IQVDGTLQAPPHPKGEGW
Sbjct: 61  QAVASAWKEACASTSPSKLLIPKGSYQLKGASFRGPCKSAIDIQVDGTLQAPPHPKGEGW 120

Query: 121 IMLEYIDQLTLSGTGVFDGQGKAGWEKNDCHLKKICTKLPMSLKFNFVTNSVVKDITSLD 180
           IMLEYIDQLTLSGTGVFDGQGKAGWEKNDCHLKKICTKLPMSLKFNFVTNSVVKDITSLD
Sbjct: 121 IMLEYIDQLTLSGTGVFDGQGKAGWEKNDCHLKKICTKLPMSLKFNFVTNSVVKDITSLD 180

Query: 181 SKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHISSSENINILNTNIGTGDDCISVGDS 240
           SKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHISSSENINILNTNIGTGDDCISVGDS
Sbjct: 181 SKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHISSSENINILNTNIGTGDDCISVGDS 240

Query: 241 NSQITISDVTCGPGHGISIGSLGKYSKEKDVIGVFVKKCKLTSTTNGVRIKTWPDSAGAF 300
           NSQITISDVTCGPGHGISIGSLGKYSKEKDVIGVFVKKCKLTSTTNGVRIKTWPDSAGAF
Sbjct: 241 NSQITISDVTCGPGHGISIGSLGKYSKEKDVIGVFVKKCKLTSTTNGVRIKTWPDSAGAF 300

Query: 301 IASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVAVK 360
           IASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVAVK
Sbjct: 301 IASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVAVK 360

Query: 361 LVCSSSNPCEGVEVADINLTYNGKQGPIKSECANVKPTITGQQNPKICAEVAPPNAPSTD 420
           LVCSSSNPCEGVEVADINLTYNGKQGPIKSECANVKPTITGQQNPKICA+VAPPNAPSTD
Sbjct: 361 LVCSSSNPCEGVEVADINLTYNGKQGPIKSECANVKPTITGQQNPKICAKVAPPNAPSTD 412

[Close]

BLAST of MS028289 vs. NCBI nr
Match: KAA0045608.1 (exopolygalacturonase-like [Cucumis melo var. makuwa] >TYK02648.1 exopolygalacturonase-like [Cucumis melo var. makuwa])

HSP 1 Score: 662.9 bits (1709), Expect = 1.8e-186
Identity = 326/421 (77.43%), Postives = 366/421 (86.94%), Query Frame = 0


Query: 1   MGLGSNFV-VLPLSLLLVSIATAAPAKPAAPVGGSGAAPAGGAGGVFDVAKYGAKPNADI 60
           MGL SNFV +LP+ LLLVS                  + A  +GGVFD+ KYGAKPNAD+
Sbjct: 1   MGLISNFVTLLPVLLLLVS-----------------NSKAQSSGGVFDITKYGAKPNADV 60

Query: 61  TQAVANAWKEACASTSPSKLLIPKGSYQLNGASFKGPCKSAIEIQVDGTLQAPPHPKGEG 120
           T A+A+AWKEACAST+PSK+LIPKGSY L+ ++ KGPCKSAIE+Q++GTLQAP  PKG+G
Sbjct: 61  TAALASAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKGDG 120

Query: 121 WIMLEYIDQLTLSGTGVFDGQGKAGWEKNDCHLKKICTKLPMSLKFNFVTNSVVKDITSL 180
            ++LEY+DQLT+SGTGV DGQGKAGWEKNDCHLKK CTKLPM+LK NFVTNS+VKDITSL
Sbjct: 121 LLLLEYVDQLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFVTNSIVKDITSL 180

Query: 181 DSKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHISSSENINILNTNIGTGDDCISVGD 240
           DSKN+HINLLGCKN+TF HVTI+AP +SPNTDGIH+SSSE INILNTNI TGDDCISVGD
Sbjct: 181 DSKNYHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGD 240

Query: 241 SNSQITISDVTCGPGHGISIGSLGKYSKEKDVIGVFVKKCKLTSTTNGVRIKTWPDSAGA 300
           +N Q+ ISDVTCGPGHGISIGSLGKYSKEK+V+GV VKKCKLT TTNGVRIKTWPDSA A
Sbjct: 241 TNKQVVISDVTCGPGHGISIGSLGKYSKEKEVVGVTVKKCKLTDTTNGVRIKTWPDSAVA 300

Query: 301 FIASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVAV 360
           F ASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKIS VSFKNIRGTSATPVAV
Sbjct: 301 FPASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISNVSFKNIRGTSATPVAV 360

Query: 361 KLVCSSSNPCEGVEVADINLTYNGKQGPIKSECANVKPTITGQQNPKICAEVAPPNAPST 420
           K+VCS SNPCEGVEVADI+LTY+G +GPIKS+CANVKP I+G+QNP IC E AP   PS+
Sbjct: 361 KIVCSQSNPCEGVEVADIDLTYSGSEGPIKSQCANVKPVISGKQNPPICGEPAPAGGPSS 404

[Close]

BLAST of MS028289 vs. NCBI nr
Match: KAA0045594.1 (exopolygalacturonase-like [Cucumis melo var. makuwa])

HSP 1 Score: 662.1 bits (1707), Expect = 3.1e-186
Identity = 324/420 (77.14%), Postives = 366/420 (87.14%), Query Frame = 0


Query: 1   MGLGSNFVVLPLSLLLVSIATAAPAKPAAPVGGSGAAPAGGAGGVFDVAKYGAKPNADIT 60
           MGL SNFV L LS+LL+ ++                + A  +GGVFD+ KYGAKPNAD+T
Sbjct: 1   MGLISNFVAL-LSVLLLLVSN---------------SKAQSSGGVFDITKYGAKPNADVT 60

Query: 61  QAVANAWKEACASTSPSKLLIPKGSYQLNGASFKGPCKSAIEIQVDGTLQAPPHPKGEGW 120
            A+A+AWKEACAST+PSK+LIPKGSY L+ ++ KGPCKSAIE+Q++GTLQAP  PKG+G 
Sbjct: 61  AALASAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKGDGL 120

Query: 121 IMLEYIDQLTLSGTGVFDGQGKAGWEKNDCHLKKICTKLPMSLKFNFVTNSVVKDITSLD 180
           ++LEY+DQLT+SGTGV DGQGKAGWEKNDCHLKK CTKLPM+LK NFVTNS+VKDITSLD
Sbjct: 121 LLLEYVDQLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFVTNSIVKDITSLD 180

Query: 181 SKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHISSSENINILNTNIGTGDDCISVGDS 240
           SKN+HINLLGCKN+TF HVTI+AP +SPNTDGIH+SSSE INILNTNI TGDDCISVGD+
Sbjct: 181 SKNYHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDT 240

Query: 241 NSQITISDVTCGPGHGISIGSLGKYSKEKDVIGVFVKKCKLTSTTNGVRIKTWPDSAGAF 300
           N Q+ ISDVTCGPGHGISIGSLGKYSKEK+V+GV VKKCKLT TTNGVRIKTWPDSA AF
Sbjct: 241 NKQVVISDVTCGPGHGISIGSLGKYSKEKEVVGVTVKKCKLTDTTNGVRIKTWPDSAVAF 300

Query: 301 IASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVAVK 360
            ASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKIS VSFKNIRGTSATPVAVK
Sbjct: 301 PASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISNVSFKNIRGTSATPVAVK 360

Query: 361 LVCSSSNPCEGVEVADINLTYNGKQGPIKSECANVKPTITGQQNPKICAEVAPPNAPSTD 420
           +VCS SNPCEGVEVADI+LTY+G +GPIKS+CANVKP I+G+QNP IC E AP   PS+D
Sbjct: 361 IVCSQSNPCEGVEVADIDLTYSGSEGPIKSQCANVKPVISGKQNPPICGEPAPAGGPSSD 404

[Close]

BLAST of MS028289 vs. NCBI nr
Match: XP_011657634.1 (exopolygalacturonase [Cucumis sativus])

HSP 1 Score: 659.1 bits (1699), Expect = 2.6e-185
Identity = 327/421 (77.67%), Postives = 366/421 (86.94%), Query Frame = 0


Query: 1   MGLGSNFV-VLPLSLLLVSIATAAPAKPAAPVGGSGAAPAGGAGGVFDVAKYGAKPNADI 60
           MGL SN V +LPL LLLVS + A PA  AA      A PAGGAGGVFD+ KYGAKPNADI
Sbjct: 1   MGLISNIVAILPLLLLLVSNSKAQPA--AAQPSAQPAQPAGGAGGVFDITKYGAKPNADI 60

Query: 61  TQAVANAWKEACASTSPSKLLIPKGSYQLNGASFKGPCKSAIEIQVDGTLQAPPHPKGEG 120
           T A+ +AWKEACAST+PSK+LIPKGSY L+ ++ KGPCKS IE+Q++GTLQAP HP+GEG
Sbjct: 61  TAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPEGEG 120

Query: 121 WIMLEYIDQLTLSGTGVFDGQGKAGWEKNDCHLKKICTKLPMSLKFNFVTNSVVKDITSL 180
            ++LE  D LT+SGTGV DGQGKAGWEKNDCHLKK CTKLPM+LK NF+TNS+V  ITSL
Sbjct: 121 LLILENTDLLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSL 180

Query: 181 DSKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHISSSENINILNTNIGTGDDCISVGD 240
           DSKNFHINLLGCKN+TF HVTI+AP +SPNTDGIH+SSSE INILNTNI TGDDCISVGD
Sbjct: 181 DSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGD 240

Query: 241 SNSQITISDVTCGPGHGISIGSLGKYSKEKDVIGVFVKKCKLTSTTNGVRIKTWPDSAGA 300
           SN Q+ ISDVTCGPGHGISIGSLGKY+KEK+V+GV VKKCKLT TTNGVRIKTWPDSA A
Sbjct: 241 SNKQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKTWPDSAVA 300

Query: 301 FIASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVAV 360
           F A+DMHFEDIEM NVSNP+IIDQEYCPWNQCNRKV SKIKIS VSFKNIRGTSAT +AV
Sbjct: 301 FPATDMHFEDIEMDNVSNPIIIDQEYCPWNQCNRKVASKIKISNVSFKNIRGTSATAIAV 360

Query: 361 KLVCSSSNPCEGVEVADINLTYNGKQGPIKSECANVKPTITGQQNPKICAEVAPPNAPST 420
           K+VCS S PCEGVE+ADI+LTY+G +GPIKS+CANVKP ITG+QNP IC EVAP + PST
Sbjct: 361 KIVCSKSIPCEGVEIADIDLTYSGPEGPIKSQCANVKPVITGKQNPPICGEVAPADGPST 419

[Close]

BLAST of MS028289 vs. NCBI nr
Match: KAA0045593.1 (exopolygalacturonase-like [Cucumis melo var. makuwa] >TYK28803.1 exopolygalacturonase-like [Cucumis melo var. makuwa])

HSP 1 Score: 659.1 bits (1699), Expect = 2.6e-185
Identity = 324/421 (76.96%), Postives = 364/421 (86.46%), Query Frame = 0


Query: 1   MGLGSNFV-VLPLSLLLVSIATAAPAKPAAPVGGSGAAPAGGAGGVFDVAKYGAKPNADI 60
           MGL SNFV +LP+ LLLVS                  + A  +G VFD+ KYGAKPNAD+
Sbjct: 1   MGLISNFVALLPVLLLLVS-----------------NSKAQSSGSVFDITKYGAKPNADV 60

Query: 61  TQAVANAWKEACASTSPSKLLIPKGSYQLNGASFKGPCKSAIEIQVDGTLQAPPHPKGEG 120
           T A+ +AWKEACAST+PSK+LIPKGSY L+ ++ KGPCKSAIE+Q++GTLQAP  PKG+G
Sbjct: 61  TAALVSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKGDG 120

Query: 121 WIMLEYIDQLTLSGTGVFDGQGKAGWEKNDCHLKKICTKLPMSLKFNFVTNSVVKDITSL 180
            ++LEY+DQLT+SGTGV DGQGKAGWEKNDCHLKK CTKLPM+LK NFVTNS+VKDITSL
Sbjct: 121 LLLLEYVDQLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFVTNSIVKDITSL 180

Query: 181 DSKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHISSSENINILNTNIGTGDDCISVGD 240
           DSKN+HINLLGCKN+TF HVTI+AP +SPNTDGIH+SSSE INILNTNI TGDDCISVGD
Sbjct: 181 DSKNYHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGD 240

Query: 241 SNSQITISDVTCGPGHGISIGSLGKYSKEKDVIGVFVKKCKLTSTTNGVRIKTWPDSAGA 300
           +N Q+ ISDVTCGPGHGISIGSLGKYSKEK+V+GV VKKCKLT TTNGVRIKTWPDSA A
Sbjct: 241 TNKQVVISDVTCGPGHGISIGSLGKYSKEKEVVGVTVKKCKLTDTTNGVRIKTWPDSAVA 300

Query: 301 FIASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVAV 360
           F ASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKIS VSFKNIRGTSATPVAV
Sbjct: 301 FPASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISNVSFKNIRGTSATPVAV 360

Query: 361 KLVCSSSNPCEGVEVADINLTYNGKQGPIKSECANVKPTITGQQNPKICAEVAPPNAPST 420
           K+VCS SNPCEGVEVADI+LTY+G +GPIKS+CANVKP I+G+QNP IC E AP   PS+
Sbjct: 361 KIVCSQSNPCEGVEVADIDLTYSGSEGPIKSQCANVKPVISGKQNPPICGEPAPAGGPSS 404

[Close]

BLAST of MS028289 vs. ExPASy Swiss-Prot
Match: Q40312 (Polygalacturonase OS=Medicago sativa OX=3879 PE=2 SV=1)

HSP 1 Score: 449.5 bits (1155), Expect = 4.1e-125
Identity = 217/384 (56.51%), Postives = 281/384 (73.18%), Query Frame = 0


Query: 44  GVFDVAKYGAKPNADITQAVANAWKEACASTSPSKLLIPKGSYQLNGASFKGPCKSAIEI 103
           GV D++K+G KPN+DI QA+ +AW EACAST+ +K++IP G+YQLNG   KGPCK+ IE+
Sbjct: 23  GVLDISKFGGKPNSDIGQALTSAWNEACASTTAAKIVIPAGTYQLNGIELKGPCKAPIEL 82

Query: 104 QVDGTLQAPPHP---KG-EGWIMLEYIDQLTLSGTGVFDGQGKAGWEK----NDCHLKKI 163
           QVDGT+QAP  P   KG E W    Y+D LTLSG GVFDGQG   ++K    +    K  
Sbjct: 83  QVDGTIQAPADPSVIKGTEQWFKFLYMDHLTLSGKGVFDGQGATVYKKAAPASAWSGKNS 142

Query: 164 CTKLPMSLKFNFVTNSVVKDITSLDSKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHI 223
            +K+ M+  FNFV NS+V+ +TS DSKNFH+ + GCKN+TF   TI+AP  SPNTDGIH+
Sbjct: 143 NSKVFMNFGFNFVNNSIVRGVTSKDSKNFHVMVFGCKNITFDGFTITAPGDSPNTDGIHM 202

Query: 224 SSSENINILNTNIGTGDDCISVGDSNSQITISDVTCGPGHGISIGSLGKYSKEKDVIGVF 283
             S ++ ILNTNIGTGDDC+S+GD + QIT+  V CGPGHG+S+GSLGK++ E++V G+ 
Sbjct: 203 GKSTDVKILNTNIGTGDDCVSIGDGSKQITVQGVNCGPGHGLSVGSLGKFTTEENVEGIT 262

Query: 284 VKKCKLTSTTNGVRIKTWPDSAGAFIASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKV 343
           VK C LT+T NGVRIKTWPD+ G    SD+HFEDI M NV NPVIIDQEY PWNQC++K 
Sbjct: 263 VKNCTLTATDNGVRIKTWPDAPGTITVSDIHFEDITMTNVKNPVIIDQEYYPWNQCSKKN 322

Query: 344 PSKIKISKVSFKNIRGTSATPVAVKLVCSSSNPCEGVEVADINLTYNGKQGPIKSECANV 403
           PSKIK+SK+SFKN++GTS T   V L+CSS+ PC+GVE+ +++L +NG   P  ++C NV
Sbjct: 323 PSKIKLSKISFKNVKGTSGTAEGVVLICSSAVPCDGVELNNVDLKFNG--APTTAKCTNV 382

Query: 404 KPTITGQQNPKICAEVAPPNAPST 420
           KP +TG     +C     P A +T
Sbjct: 383 KPLVTG--TAPVCQAPGAPAASTT 402

[Close]

BLAST of MS028289 vs. ExPASy Swiss-Prot
Match: Q05967 (Polygalacturonase OS=Nicotiana tabacum OX=4097 GN=PG1 PE=2 SV=1)

HSP 1 Score: 447.6 bits (1150), Expect = 1.6e-124
Identity = 211/372 (56.72%), Postives = 276/372 (74.19%), Query Frame = 0


Query: 44  GVFDVAKYGAKPNADITQAVANAWKEACASTSPSKLLIPKGSYQLNGASFKGPCKSAIEI 103
           GVFD+ KYGA  NADI++A+ NA+KEAC STSPS ++IPKG++ +N    +GPCKS +E+
Sbjct: 25  GVFDITKYGANSNADISEALLNAFKEACQSTSPSTIVIPKGTFTMNQVKLEGPCKSPLEL 84

Query: 104 QVDGTLQAPPHP---KGEGWIMLEYIDQLTLSGTGVFDGQGKAGWEKNDCHLKKICTKLP 163
           Q+  TL+AP  P   K   W+ +  +DQ T+SG G+ DGQ  A WE   C   K C KLP
Sbjct: 85  QIQATLKAPSDPSQLKVGEWLTVNKLDQFTMSGGGILDGQAAAAWE---CKQSKKCNKLP 144

Query: 164 MSLKFNFVTNSVVKDITSLDSKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHISSSEN 223
            +L FN +TNS +KDIT+LDSK+FH+N+  CKN+TF    +SAP +SPNTDGIH+S S +
Sbjct: 145 NNLSFNSLTNSTIKDITTLDSKSFHVNVNQCKNLTFIRFNVSAPANSPNTDGIHVSRSSS 204

Query: 224 INILNTNIGTGDDCISVGDSNSQITISDVTCGPGHGISIGSLGKYSKEKDVIGVFVKKCK 283
           +NI ++N  TGDDCISVGD   Q+ I+ VTCGPGHGIS+GSLG    EK V+GVFV+ C 
Sbjct: 205 VNITDSNFSTGDDCISVGDETEQLYITRVTCGPGHGISVGSLGGNPDEKPVVGVFVRNCT 264

Query: 284 LTSTTNGVRIKTWPDSAGAFIASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIK 343
            T+T NGVRIKTWP S    + +D+HFEDI + NVSNPV+IDQ YCP+N+CN+ +PS++K
Sbjct: 265 FTNTDNGVRIKTWPASHPG-VVNDVHFEDIIVQNVSNPVVIDQVYCPFNKCNKDLPSQVK 324

Query: 344 ISKVSFKNIRGTSATPVAVKLVCSSSNPCEGVEVADINLTYNGKQGPIKSECANVKPTIT 403
           ISKVSF+NI+GTS T  AV L+ S   PCEG+EV DI++TY+GK+GP KS C N+KP++ 
Sbjct: 325 ISKVSFQNIKGTSRTQDAVSLLRSKGVPCEGIEVGDIDITYSGKEGPAKSSCENIKPSLK 384

Query: 404 GQQNPKICAEVA 413
           G+QNP +C   A
Sbjct: 385 GKQNPPVCTASA 392

[Close]

BLAST of MS028289 vs. ExPASy Swiss-Prot
Match: P24548 (Exopolygalacturonase (Fragment) OS=Oenothera organensis OX=3945 PE=2 SV=1)

HSP 1 Score: 445.3 bits (1144), Expect = 7.8e-124
Identity = 209/356 (58.71%), Postives = 270/356 (75.84%), Query Frame = 0


Query: 58  DITQAVANAWKEACASTSPSKLLIPKGSYQLNGASFKGPCKSAIEIQVDGTLQAPPHP-- 117
           D TQA+  AWKEACAS SPS +L+PKG++ +   + +GPCKS+I +Q+ GTL+AP  P  
Sbjct: 1   DSTQALTTAWKEACASASPSTILVPKGNFAVGLITLEGPCKSSIGLQLQGTLKAPADPSK 60

Query: 118 -KGEGWIMLEYIDQLTLSGTGVFDGQGKAGWEKNDCHLK-KICTKLPMSLKFNFVTNSVV 177
            KG GWI L  ID LT+ G GVFDGQGK+ W +NDCH    IC  L M+L+   VTNS++
Sbjct: 61  IKGLGWINLNKIDLLTIFGGGVFDGQGKSAWVQNDCHKNGPICKTLSMNLRLYAVTNSIL 120

Query: 178 KDITSLDSKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHISSSENINILNTNIGTGDD 237
           +D+T+LDSKNFH+N++GCKN+TF+   ISA + S NTDGIHI  S+ +NI+NT I TGDD
Sbjct: 121 RDVTTLDSKNFHVNVIGCKNLTFERFKISAAETSINTDGIHIGRSDGVNIINTEIKTGDD 180

Query: 238 CISVGDSNSQITISDVTCGPGHGISIGSLGKYSKEKDVIGVFVKKCKLTSTTNGVRIKTW 297
           CIS+GD +  I I+++TCGPGHGIS+GSLG+Y  E+ V+G++VK C +T + NGVRIKTW
Sbjct: 181 CISLGDGSKNINITNITCGPGHGISVGSLGRYKNEESVVGIYVKNCTITGSQNGVRIKTW 240

Query: 298 PDSAGAFIASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTS 357
           P S     AS+MHF+DI M +V  P++IDQ YCP+NQC  +VPS +K+SK+SFKNI+GTS
Sbjct: 241 PKSEPG-EASEMHFQDITMNSVGTPILIDQGYCPYNQCTAEVPSSVKLSKISFKNIKGTS 300

Query: 358 ATPVAVKLVCSSSNPCEGVEVADINLTYNGKQGPIKSECANVKPTITGQQNPKICA 410
            T  AVKLVCS S PC GVE+ADI+LTY+GK GP  S C N+KPTI G+Q P IC+
Sbjct: 301 TTKEAVKLVCSKSFPCNGVELADIDLTYSGKGGPATSVCENIKPTIKGKQIPAICS 355

[Close]

BLAST of MS028289 vs. ExPASy Swiss-Prot
Match: Q39766 (Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1)

HSP 1 Score: 417.5 bits (1072), Expect = 1.7e-115
Identity = 192/377 (50.93%), Postives = 270/377 (71.62%), Query Frame = 0


Query: 48  VAKYGAKPN--ADITQAVANAWKEACASTSPSKLLIPKGSYQLNGASFKGPCKSAIEIQV 107
           VAK+GAK +   D+++   +AWKEACAS +PS ++IPKG+Y L+  + +GPCK+ IEI V
Sbjct: 32  VAKFGAKADGKTDLSKPFLDAWKEACASVTPSTVVIPKGTYLLSKVNLEGPCKAPIEINV 91

Query: 108 DGTLQAPPHP---KGEGWIMLEYIDQLTLSGTGVFDGQGKAGWEKNDCHLKKICTKLPMS 167
            GT+QAP  P   K   W+    ++   + G G+FDGQG   +EKN C  ++  +KLP++
Sbjct: 92  QGTIQAPADPSAFKDPNWVRFYSVENFKMFGGGIFDGQGSIAYEKNTCENREFRSKLPVN 151

Query: 168 LKFNFVTNSVVKDITSLDSKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHISSSENIN 227
           ++F+FVTN++++DITS DSK FHIN+  CKN+T + + I APD SPNTDGIH+  SE +N
Sbjct: 152 IRFDFVTNALIQDITSKDSKLFHINVFACKNITLERLKIEAPDESPNTDGIHMGKSEGVN 211

Query: 228 ILNTNIGTGDDCISVGDSNSQITISDVTCGPGHGISIGSLGKYSKEKDVIGVFVKKCKLT 287
           I+ ++I TGDDCIS+GD    + I ++TCGPGHGISIGSLGK+  E+ V G+ +  C +T
Sbjct: 212 IIASDIKTGDDCISIGDGTKNMVIKEITCGPGHGISIGSLGKFQNEEPVEGIKISNCTIT 271

Query: 288 STTNGVRIKTWPDSAGAFIASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKIS 347
           +T+NG RIKTWP   G  + S++HFEDI M NVS+P++IDQ+YCPWN+C +   SK+K+S
Sbjct: 272 NTSNGARIKTWPGEHGGAV-SEIHFEDITMNNVSSPILIDQQYCPWNKCKKNEESKVKLS 331

Query: 348 KVSFKNIRGTSATPVAVKLVCSSSNPCEGVEVADINLTYNGKQGPIKSECANVKPTITGQ 407
            +SFKNIRGTSA P A+K +CS S+PC+ VE+ADI++ +NG + P  S+C NVKP   G+
Sbjct: 332 NISFKNIRGTSALPEAIKFICSGSSPCQNVELADIDIQHNGAE-PATSQCLNVKPITIGK 391

Query: 408 QNPKICAEVAPPNAPST 420
            NP  C+   P    +T
Sbjct: 392 LNPIPCSGPVPKTPSAT 406

[Close]

BLAST of MS028289 vs. ExPASy Swiss-Prot
Match: Q39786 (Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1)

HSP 1 Score: 417.2 bits (1071), Expect = 2.3e-115
Identity = 191/377 (50.66%), Postives = 271/377 (71.88%), Query Frame = 0


Query: 48  VAKYGAKPN--ADITQAVANAWKEACASTSPSKLLIPKGSYQLNGASFKGPCKSAIEIQV 107
           VAK+GAK +   D+++   +AWKEACAS +PS ++IPKG+Y L+  + +GPCK+ IEI V
Sbjct: 32  VAKFGAKADGKTDLSKPFLDAWKEACASVTPSTVVIPKGTYLLSKVNLEGPCKAPIEINV 91

Query: 108 DGTLQAPPHP---KGEGWIMLEYIDQLTLSGTGVFDGQGKAGWEKNDCHLKKICTKLPMS 167
            GT+QAP  P   K   W+    ++   + G G+FDGQG   +EKN C  ++  +KLP++
Sbjct: 92  QGTIQAPADPSAFKDPNWVRFYSVENFKMFGGGIFDGQGSIAYEKNTCENREFRSKLPVN 151

Query: 168 LKFNFVTNSVVKDITSLDSKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHISSSENIN 227
           ++F+F+TN++++DITS DSK FHIN+  CKN+T + + I APD SPNTDGIH+  SE +N
Sbjct: 152 IRFDFLTNALIQDITSKDSKLFHINVFACKNITLERLKIEAPDESPNTDGIHMGKSEGVN 211

Query: 228 ILNTNIGTGDDCISVGDSNSQITISDVTCGPGHGISIGSLGKYSKEKDVIGVFVKKCKLT 287
           I+ ++I TGDDCIS+GD    + I ++TCGPGHGISIGSLGK+  E+ V G+ +  C +T
Sbjct: 212 IIASDIKTGDDCISIGDGTKNMVIKEITCGPGHGISIGSLGKFQNEEPVEGIKISNCTIT 271

Query: 288 STTNGVRIKTWPDSAGAFIASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKIS 347
           +T+NG RIKTWP   G  + S++HFEDI M NVS+P++IDQ+YCPWN+C +   SK+K+S
Sbjct: 272 NTSNGARIKTWPGEHGGAV-SEIHFEDITMNNVSSPILIDQQYCPWNKCKKNEESKVKLS 331

Query: 348 KVSFKNIRGTSATPVAVKLVCSSSNPCEGVEVADINLTYNGKQGPIKSECANVKPTITGQ 407
            +SFKNIRGTSA P A+K +CS S+PC+ VE+ADI++ +NG + P  S+C NVKP  +G+
Sbjct: 332 NISFKNIRGTSALPEAIKFICSGSSPCQNVELADIDIKHNGAE-PATSQCLNVKPITSGK 391

Query: 408 QNPKICAEVAPPNAPST 420
            NP  C+   P    +T
Sbjct: 392 LNPIPCSGPVPKTPSAT 406

[Close]

BLAST of MS028289 vs. ExPASy TrEMBL
Match: A0A6J1C2U8 (exopolygalacturonase-like OS=Momordica charantia OX=3673 GN=LOC111007858 PE=3 SV=1)

HSP 1 Score: 813.9 bits (2101), Expect = 3.1e-232
Identity = 406/420 (96.67%), Postives = 410/420 (97.62%), Query Frame = 0


Query: 1   MGLGSNFVVLPLSLLLVSIATAAPAKPAAPVGGSGAAPAGGAGGVFDVAKYGAKPNADIT 60
           MGLGSNFVVLPLSLLLVSIATAAPAKP        AAP GGAGGVFDVAKYGAKPNADIT
Sbjct: 1   MGLGSNFVVLPLSLLLVSIATAAPAKP--------AAPTGGAGGVFDVAKYGAKPNADIT 60

Query: 61  QAVANAWKEACASTSPSKLLIPKGSYQLNGASFKGPCKSAIEIQVDGTLQAPPHPKGEGW 120
           QAVA+AWKEACASTSPSKLLIPKGSYQL GASF+GPCKSAI+IQVDGTLQAPPHPKGEGW
Sbjct: 61  QAVASAWKEACASTSPSKLLIPKGSYQLKGASFRGPCKSAIDIQVDGTLQAPPHPKGEGW 120

Query: 121 IMLEYIDQLTLSGTGVFDGQGKAGWEKNDCHLKKICTKLPMSLKFNFVTNSVVKDITSLD 180
           IMLEYIDQLTLSGTGVFDGQGKAGWEKNDCHLKKICTKLPMSLKFNFVTNSVVKDITSLD
Sbjct: 121 IMLEYIDQLTLSGTGVFDGQGKAGWEKNDCHLKKICTKLPMSLKFNFVTNSVVKDITSLD 180

Query: 181 SKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHISSSENINILNTNIGTGDDCISVGDS 240
           SKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHISSSENINILNTNIGTGDDCISVGDS
Sbjct: 181 SKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHISSSENINILNTNIGTGDDCISVGDS 240

Query: 241 NSQITISDVTCGPGHGISIGSLGKYSKEKDVIGVFVKKCKLTSTTNGVRIKTWPDSAGAF 300
           NSQITISDVTCGPGHGISIGSLGKYSKEKDVIGVFVKKCKLTSTTNGVRIKTWPDSAGAF
Sbjct: 241 NSQITISDVTCGPGHGISIGSLGKYSKEKDVIGVFVKKCKLTSTTNGVRIKTWPDSAGAF 300

Query: 301 IASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVAVK 360
           IASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVAVK
Sbjct: 301 IASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVAVK 360

Query: 361 LVCSSSNPCEGVEVADINLTYNGKQGPIKSECANVKPTITGQQNPKICAEVAPPNAPSTD 420
           LVCSSSNPCEGVEVADINLTYNGKQGPIKSECANVKPTITGQQNPKICA+VAPPNAPSTD
Sbjct: 361 LVCSSSNPCEGVEVADINLTYNGKQGPIKSECANVKPTITGQQNPKICAKVAPPNAPSTD 412

[Close]

BLAST of MS028289 vs. ExPASy TrEMBL
Match: A0A5A7TRZ0 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold280G00600 PE=3 SV=1)

HSP 1 Score: 662.9 bits (1709), Expect = 8.8e-187
Identity = 326/421 (77.43%), Postives = 366/421 (86.94%), Query Frame = 0


Query: 1   MGLGSNFV-VLPLSLLLVSIATAAPAKPAAPVGGSGAAPAGGAGGVFDVAKYGAKPNADI 60
           MGL SNFV +LP+ LLLVS                  + A  +GGVFD+ KYGAKPNAD+
Sbjct: 1   MGLISNFVTLLPVLLLLVS-----------------NSKAQSSGGVFDITKYGAKPNADV 60

Query: 61  TQAVANAWKEACASTSPSKLLIPKGSYQLNGASFKGPCKSAIEIQVDGTLQAPPHPKGEG 120
           T A+A+AWKEACAST+PSK+LIPKGSY L+ ++ KGPCKSAIE+Q++GTLQAP  PKG+G
Sbjct: 61  TAALASAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKGDG 120

Query: 121 WIMLEYIDQLTLSGTGVFDGQGKAGWEKNDCHLKKICTKLPMSLKFNFVTNSVVKDITSL 180
            ++LEY+DQLT+SGTGV DGQGKAGWEKNDCHLKK CTKLPM+LK NFVTNS+VKDITSL
Sbjct: 121 LLLLEYVDQLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFVTNSIVKDITSL 180

Query: 181 DSKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHISSSENINILNTNIGTGDDCISVGD 240
           DSKN+HINLLGCKN+TF HVTI+AP +SPNTDGIH+SSSE INILNTNI TGDDCISVGD
Sbjct: 181 DSKNYHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGD 240

Query: 241 SNSQITISDVTCGPGHGISIGSLGKYSKEKDVIGVFVKKCKLTSTTNGVRIKTWPDSAGA 300
           +N Q+ ISDVTCGPGHGISIGSLGKYSKEK+V+GV VKKCKLT TTNGVRIKTWPDSA A
Sbjct: 241 TNKQVVISDVTCGPGHGISIGSLGKYSKEKEVVGVTVKKCKLTDTTNGVRIKTWPDSAVA 300

Query: 301 FIASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVAV 360
           F ASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKIS VSFKNIRGTSATPVAV
Sbjct: 301 FPASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISNVSFKNIRGTSATPVAV 360

Query: 361 KLVCSSSNPCEGVEVADINLTYNGKQGPIKSECANVKPTITGQQNPKICAEVAPPNAPST 420
           K+VCS SNPCEGVEVADI+LTY+G +GPIKS+CANVKP I+G+QNP IC E AP   PS+
Sbjct: 361 KIVCSQSNPCEGVEVADIDLTYSGSEGPIKSQCANVKPVISGKQNPPICGEPAPAGGPSS 404

[Close]

BLAST of MS028289 vs. ExPASy TrEMBL
Match: A0A5A7TR51 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G00990 PE=3 SV=1)

HSP 1 Score: 662.1 bits (1707), Expect = 1.5e-186
Identity = 324/420 (77.14%), Postives = 366/420 (87.14%), Query Frame = 0


Query: 1   MGLGSNFVVLPLSLLLVSIATAAPAKPAAPVGGSGAAPAGGAGGVFDVAKYGAKPNADIT 60
           MGL SNFV L LS+LL+ ++                + A  +GGVFD+ KYGAKPNAD+T
Sbjct: 1   MGLISNFVAL-LSVLLLLVSN---------------SKAQSSGGVFDITKYGAKPNADVT 60

Query: 61  QAVANAWKEACASTSPSKLLIPKGSYQLNGASFKGPCKSAIEIQVDGTLQAPPHPKGEGW 120
            A+A+AWKEACAST+PSK+LIPKGSY L+ ++ KGPCKSAIE+Q++GTLQAP  PKG+G 
Sbjct: 61  AALASAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKGDGL 120

Query: 121 IMLEYIDQLTLSGTGVFDGQGKAGWEKNDCHLKKICTKLPMSLKFNFVTNSVVKDITSLD 180
           ++LEY+DQLT+SGTGV DGQGKAGWEKNDCHLKK CTKLPM+LK NFVTNS+VKDITSLD
Sbjct: 121 LLLEYVDQLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFVTNSIVKDITSLD 180

Query: 181 SKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHISSSENINILNTNIGTGDDCISVGDS 240
           SKN+HINLLGCKN+TF HVTI+AP +SPNTDGIH+SSSE INILNTNI TGDDCISVGD+
Sbjct: 181 SKNYHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDT 240

Query: 241 NSQITISDVTCGPGHGISIGSLGKYSKEKDVIGVFVKKCKLTSTTNGVRIKTWPDSAGAF 300
           N Q+ ISDVTCGPGHGISIGSLGKYSKEK+V+GV VKKCKLT TTNGVRIKTWPDSA AF
Sbjct: 241 NKQVVISDVTCGPGHGISIGSLGKYSKEKEVVGVTVKKCKLTDTTNGVRIKTWPDSAVAF 300

Query: 301 IASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVAVK 360
            ASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKIS VSFKNIRGTSATPVAVK
Sbjct: 301 PASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISNVSFKNIRGTSATPVAVK 360

Query: 361 LVCSSSNPCEGVEVADINLTYNGKQGPIKSECANVKPTITGQQNPKICAEVAPPNAPSTD 420
           +VCS SNPCEGVEVADI+LTY+G +GPIKS+CANVKP I+G+QNP IC E AP   PS+D
Sbjct: 361 IVCSQSNPCEGVEVADIDLTYSGSEGPIKSQCANVKPVISGKQNPPICGEPAPAGGPSSD 404

[Close]

BLAST of MS028289 vs. ExPASy TrEMBL
Match: A0A5D3DYI3 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold303G00050 PE=3 SV=1)

HSP 1 Score: 659.1 bits (1699), Expect = 1.3e-185
Identity = 324/421 (76.96%), Postives = 364/421 (86.46%), Query Frame = 0


Query: 1   MGLGSNFV-VLPLSLLLVSIATAAPAKPAAPVGGSGAAPAGGAGGVFDVAKYGAKPNADI 60
           MGL SNFV +LP+ LLLVS                  + A  +G VFD+ KYGAKPNAD+
Sbjct: 1   MGLISNFVALLPVLLLLVS-----------------NSKAQSSGSVFDITKYGAKPNADV 60

Query: 61  TQAVANAWKEACASTSPSKLLIPKGSYQLNGASFKGPCKSAIEIQVDGTLQAPPHPKGEG 120
           T A+ +AWKEACAST+PSK+LIPKGSY L+ ++ KGPCKSAIE+Q++GTLQAP  PKG+G
Sbjct: 61  TAALVSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKGDG 120

Query: 121 WIMLEYIDQLTLSGTGVFDGQGKAGWEKNDCHLKKICTKLPMSLKFNFVTNSVVKDITSL 180
            ++LEY+DQLT+SGTGV DGQGKAGWEKNDCHLKK CTKLPM+LK NFVTNS+VKDITSL
Sbjct: 121 LLLLEYVDQLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFVTNSIVKDITSL 180

Query: 181 DSKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHISSSENINILNTNIGTGDDCISVGD 240
           DSKN+HINLLGCKN+TF HVTI+AP +SPNTDGIH+SSSE INILNTNI TGDDCISVGD
Sbjct: 181 DSKNYHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGD 240

Query: 241 SNSQITISDVTCGPGHGISIGSLGKYSKEKDVIGVFVKKCKLTSTTNGVRIKTWPDSAGA 300
           +N Q+ ISDVTCGPGHGISIGSLGKYSKEK+V+GV VKKCKLT TTNGVRIKTWPDSA A
Sbjct: 241 TNKQVVISDVTCGPGHGISIGSLGKYSKEKEVVGVTVKKCKLTDTTNGVRIKTWPDSAVA 300

Query: 301 FIASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVAV 360
           F ASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKIS VSFKNIRGTSATPVAV
Sbjct: 301 FPASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISNVSFKNIRGTSATPVAV 360

Query: 361 KLVCSSSNPCEGVEVADINLTYNGKQGPIKSECANVKPTITGQQNPKICAEVAPPNAPST 420
           K+VCS SNPCEGVEVADI+LTY+G +GPIKS+CANVKP I+G+QNP IC E AP   PS+
Sbjct: 361 KIVCSQSNPCEGVEVADIDLTYSGSEGPIKSQCANVKPVISGKQNPPICGEPAPAGGPSS 404

[Close]

BLAST of MS028289 vs. ExPASy TrEMBL
Match: A0A6J1DCB0 (exopolygalacturonase-like OS=Momordica charantia OX=3673 GN=LOC111019177 PE=3 SV=1)

HSP 1 Score: 658.7 bits (1698), Expect = 1.7e-185
Identity = 319/402 (79.35%), Postives = 356/402 (88.56%), Query Frame = 0


Query: 22  AAPAKPAAPVGGSGAAP---AGGAGGVFDVAKYGAKPNADITQAVANAWKEACASTSPSK 81
           AA A  +AP    GAAP    GGAGGVFD+  YGAKP+ADI+ A+ NAWKEACAST+PSK
Sbjct: 6   AAGAASSAPGAAPGAAPGGATGGAGGVFDITTYGAKPDADISAALTNAWKEACASTTPSK 65

Query: 82  LLIPKGSYQLNGASFKGPCKSAIEIQVDGTLQAPPHPKGEGWIMLEYIDQLTLSGTGVFD 141
           +LIPKGSY L G + KGPCKS+IE+QV+GTL+AP  PKGEGW+ +EY+D LT+SGTGVFD
Sbjct: 66  VLIPKGSYLLTGVNIKGPCKSSIELQVEGTLKAPVEPKGEGWLFVEYVDFLTISGTGVFD 125

Query: 142 GQGKAGWEKNDCHLKKICTKLPMSLKFNFVTNSVVKDITSLDSKNFHINLLGCKNVTFQH 201
           G GKAGWEKNDCH  KICTKLPMSLK NF+TNS+VKDITSLDSKN+HINLLGCKNVT QH
Sbjct: 126 GNGKAGWEKNDCHKSKICTKLPMSLKLNFITNSIVKDITSLDSKNYHINLLGCKNVTIQH 185

Query: 202 VTISAPDHSPNTDGIHISSSENINILNTNIGTGDDCISVGDSNSQITISDVTCGPGHGIS 261
           VTI+AP++SPNTDG+HISSSE INIL+T I TGDDCISVGD+N QI ISDVTCGPGHGIS
Sbjct: 186 VTITAPENSPNTDGVHISSSEGINILDTKIATGDDCISVGDTNKQIVISDVTCGPGHGIS 245

Query: 262 IGSLGKYSKEKDVIGVFVKKCKLTSTTNGVRIKTWPDSAGAFIASDMHFEDIEMVNVSNP 321
           IGSLGKYSKEK+V+GV VKKCKL +T+NGVRIKTWPD+A  F A+DMHFEDIEM NVSNP
Sbjct: 246 IGSLGKYSKEKEVVGVTVKKCKLINTSNGVRIKTWPDAAVTFPATDMHFEDIEMTNVSNP 305

Query: 322 VIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVAVKLVCSSSNPCEGVEVADIN 381
           VIIDQEYCPWNQCNRKVPS IKISKVSFKNIRGTSATP+AVKLVCS S PCE VEVADI+
Sbjct: 306 VIIDQEYCPWNQCNRKVPSSIKISKVSFKNIRGTSATPIAVKLVCSKSVPCEDVEVADID 365

Query: 382 LTYNGKQGPIKSECANVKPTITGQQNPKICAEVAPPNAPSTD 421
           LTY+G QGPIKS+CANVKPTITG+QNP ICAEVAP +APSTD
Sbjct: 366 LTYSGSQGPIKSQCANVKPTITGKQNPPICAEVAPADAPSTD 407

[Close]

BLAST of MS028289 vs. TAIR 10
Match: AT3G07820.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 412.5 bits (1059), Expect = 4.0e-115
Identity = 191/368 (51.90%), Postives = 258/368 (70.11%), Query Frame = 0


Query: 47  DVAKYGAKPNADITQAVANAWKEACASTSPSKLLIPKGSYQLNGASFKGPCKSAIEIQVD 106
           +V   G+   +DITQA+  A+  AC S+SPSK++IPKG ++L     +GPCK+ IE+ + 
Sbjct: 23  EVFTIGSSSGSDITQALLKAFTSACQSSSPSKVVIPKGEFKLGEIEMRGPCKAPIEVTLQ 82

Query: 107 GTLQAPPH--PKGEGWIMLEYIDQLTLSGTGVFDGQGKAGWEKNDCHLKKICTKLPMSLK 166
           GT++A  +     E W++   ID   L+G G FDG+G A W  N+CH    C KLP+S++
Sbjct: 83  GTVKADGNAIQGKEKWVVFGNIDGFKLNGGGAFDGEGNAAWRVNNCHKTFECKKLPISIR 142

Query: 167 FNFVTNSVVKDITSLDSKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHISSSENINIL 226
           F+F+ NS ++DI+S+D+KNFHIN+LG KN+T  ++ I AP+ SPNTDGIH+  S+ + IL
Sbjct: 143 FDFILNSEIRDISSIDAKNFHINVLGAKNMTMNNIKIVAPEDSPNTDGIHLGRSDGVKIL 202

Query: 227 NTNIGTGDDCISVGDSNSQITISDVTCGPGHGISIGSLGKYSKEKDVIGVFVKKCKLTST 286
           N+ I TGDDCISVGD    + +  VTCGPGHGIS+GSLG+Y  E+DV G+ V  C L  T
Sbjct: 203 NSFISTGDDCISVGDGMKNLHVEKVTCGPGHGISVGSLGRYGHEQDVSGIKVINCTLQET 262

Query: 287 TNGVRIKTWPDSAGAFIASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISKV 346
            NG+RIKTWP +A +  ASD+HFEDI + +VSNP++IDQEYCPWNQCN++  S IK+  +
Sbjct: 263 DNGLRIKTWPSAACSTTASDIHFEDIILKDVSNPILIDQEYCPWNQCNKQKASTIKLVNI 322

Query: 347 SFKNIRGTSATPVAVKLVCSSSNPCEGVEVADINLTYNGKQGPIKSECANVKPTITGQQN 406
           SFKNIRGTS    AVKL+CS   PC+ VE+ DI++ YNG  GP    C+NV P I G Q+
Sbjct: 323 SFKNIRGTSGNKDAVKLLCSKGYPCQNVEIGDIDIKYNGADGPATFHCSNVSPKILGSQS 382

Query: 407 PKICAEVA 413
           PK C+  A
Sbjct: 383 PKACSAPA 390

[Close]

BLAST of MS028289 vs. TAIR 10
Match: AT3G07840.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 404.8 bits (1039), Expect = 8.3e-113
Identity = 190/370 (51.35%), Postives = 254/370 (68.65%), Query Frame = 0


Query: 47  DVAKYGAKPNADITQAVANAWKEACASTSPSKLLIPKGSYQLNGASFKGPCKSAIEIQVD 106
           +V   G  P +DITQA+  A+  AC + + SK++I KG ++L      GPCK+ +EI + 
Sbjct: 24  EVFNVGGSPGSDITQALLKAFTSACQAPTASKVVITKGEFKLGEIEMTGPCKAPVEINLQ 83

Query: 107 GTLQAPPH--PKGEGWIMLEYIDQLTLSGTGVFDGQGKAGWEKNDCHLKKICTKLPMSLK 166
           GTL+A        E W++   I+   L+G G+FDG+G A W  N+CH    C KLP+S++
Sbjct: 84  GTLKADGKAIQGKERWVVFLRINGFKLNGGGIFDGEGNAAWRVNNCHKTFECKKLPISIR 143

Query: 167 FNFVTNSVVKDITSLDSKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHISSSENINIL 226
           F+FV N+ ++DI+S+D+KNFHIN+LG KN+TF +V + AP  SPNTDGIH+  SE + IL
Sbjct: 144 FDFVENAEIRDISSIDAKNFHINVLGAKNMTFDNVKVIAPAESPNTDGIHLGRSEGVKIL 203

Query: 227 NTNIGTGDDCISVGDSNSQITISDVTCGPGHGISIGSLGKYSKEKDVIGVFVKKCKLTST 286
           N+ I TGDDCISVGD    + + +V CGPGHGIS+GSLG+Y  E+DV G+ V  C L  T
Sbjct: 204 NSKIATGDDCISVGDGMKNLHVENVMCGPGHGISVGSLGRYVHEQDVTGITVVNCTLQGT 263

Query: 287 TNGVRIKTWPDSAGAFIASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISKV 346
            NG+RIKTWP +A A  AS +HFE+I + NVSNP++IDQEYCPWNQCN++ PS IK+  +
Sbjct: 264 DNGLRIKTWPSAACATTASGIHFENIILNNVSNPILIDQEYCPWNQCNKQKPSTIKLVDI 323

Query: 347 SFKNIRGTSATPVAVKLVCSSSNPCEGVEVADINLTYNGKQGPIKSECANVKPTITGQQN 406
           SFKNIRGTS    AVKL+CS ++PC  VE+ +INL Y G  GP    C+NV P + G QN
Sbjct: 324 SFKNIRGTSGNKDAVKLLCSKAHPCANVEIGNINLEYKGADGPPTFMCSNVSPKLVGTQN 383

Query: 407 PKICAEVAPP 415
           PK C+    P
Sbjct: 384 PKACSAGPTP 393

[Close]

BLAST of MS028289 vs. TAIR 10
Match: AT5G48140.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 402.1 bits (1032), Expect = 5.4e-112
Identity = 187/356 (52.53%), Postives = 249/356 (69.94%), Query Frame = 0


Query: 55  PNADITQAVANAWKEACASTSPSKLLIPKGSYQLNGASFKGPCKSAIEIQVDGTLQAPPH 114
           P +DIT A+  A+ EAC   + S ++IPKG Y+L      GPCK+ I I + GT++A  +
Sbjct: 32  PGSDITNALLKAFNEACQFPTKSTVMIPKGEYKLGEIVMMGPCKAPIRIALLGTVKADGN 91

Query: 115 PKG-EGWIMLEYIDQLTLSGTGVFDGQGKAGWEKNDCHLKKICTKLPMSLKFNFVTNSVV 174
             G E W+    I+   L+G GVFDG+G A W  N+CH    C KLP+S++F+FVT++ +
Sbjct: 92  ANGKEKWVAFRNINGFKLNGGGVFDGEGNAAWRVNNCHKTFNCKKLPISIRFDFVTDAKI 151

Query: 175 KDITSLDSKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHISSSENINILNTNIGTGDD 234
           + ITSLD+K+FHIN++G KNVTF+ V I AP  SPNTDGIH+  S+ I I+N+ I TGDD
Sbjct: 152 RGITSLDAKHFHINVIGAKNVTFEDVKIIAPAESPNTDGIHVGRSDGIKIINSFISTGDD 211

Query: 235 CISVGDSNSQITISDVTCGPGHGISIGSLGKYSKEKDVIGVFVKKCKLTSTTNGVRIKTW 294
           C+SVGD    + +  VTCGPGHGISIGSLG+YS E++V G+ +  C L  T NG+RIKTW
Sbjct: 212 CVSVGDGMKNLLVERVTCGPGHGISIGSLGRYSHEENVSGIKIINCTLQETDNGLRIKTW 271

Query: 295 PDSAGAFIASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTS 354
           P +A    ASD+HFE+I + NVSNP++IDQEYCPWNQCN++ PS IK++ +SFK IRGTS
Sbjct: 272 PSAACTTTASDIHFENILLKNVSNPILIDQEYCPWNQCNKQKPSTIKLANISFKKIRGTS 331

Query: 355 ATPVAVKLVCSSSNPCEGVEVADINLTYNGKQGPIKSECANVKPTITGQQNPKICA 410
               AVKL+CS   PC+ VEV D+N+ Y G  GP   +C+NV P + G Q PK C+
Sbjct: 332 GNKDAVKLLCSKGYPCQNVEVGDVNIQYTGADGPATFQCSNVSPKLVGTQIPKACS 387

[Close]

BLAST of MS028289 vs. TAIR 10
Match: AT3G07830.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 400.2 bits (1027), Expect = 2.0e-111
Identity = 187/372 (50.27%), Postives = 257/372 (69.09%), Query Frame = 0


Query: 40  GGAGGVFDVAKYGAKPNADITQAVANAWKEACASTSPSKLLIPKGSYQLNGASFKGPCKS 99
           G +    +V +  + P +DITQA+  A+  AC S +P K++IPKG ++L      GPCKS
Sbjct: 17  GFSANAHEVLRLTSSPGSDITQALLRAFTTACQSPTPRKVVIPKGQFKLGEIMMSGPCKS 76

Query: 100 AIEIQVDGTLQAPP---HPKGEGWIMLEYIDQLTLSGTGVFDGQGKAGWEKNDCHLKKIC 159
            +EI + GT+ A     H K E W++ + +D   L+G G FDG+G A W  N+CH    C
Sbjct: 77  PVEITLLGTVLADGNSIHGK-EKWVVFQRMDGFRLNGGGTFDGEGNAAWRVNNCHKTFEC 136

Query: 160 TKLPMSLKFNFVTNSVVKDITSLDSKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHIS 219
            KLP+S++F+FVTN+ ++DI+S+D+KNFHIN++G KN+TF +V I AP  SPNTDGIH+ 
Sbjct: 137 KKLPISIRFDFVTNAEIRDISSIDAKNFHINVIGAKNMTFDNVKIMAPAESPNTDGIHLG 196

Query: 220 SSENINILNTNIGTGDDCISVGDSNSQITISDVTCGPGHGISIGSLGKYSKEKDVIGVFV 279
            S  ++I+N+ I TGDDC+SVGD    + + +V CGPGHGIS+GSLG+Y  E+DV G+ V
Sbjct: 197 RSVGVSIINSRISTGDDCVSVGDGMVNLLVKNVVCGPGHGISVGSLGRYGHEQDVSGIRV 256

Query: 280 KKCKLTSTTNGVRIKTWPDSAGAFIASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVP 339
             C L  T NG+RIKTWP +A +  AS++HFE+I + NVSNP++IDQEYCPWNQCN++  
Sbjct: 257 INCTLQETDNGLRIKTWPSAACSTTASNIHFENIILRNVSNPILIDQEYCPWNQCNKQKS 316

Query: 340 SKIKISKVSFKNIRGTSATPVAVKLVCSSSNPCEGVEVADINLTYNGKQGPIKSECANVK 399
           S IK++ +SF+ IRGTS    AVKL+CS   PCE V+V DIN+ Y G  GP    C+NV+
Sbjct: 317 SSIKLANISFRRIRGTSGNKDAVKLLCSKGYPCENVQVGDINIQYTGADGPATFMCSNVR 376

Query: 400 PTITGQQNPKIC 409
           P + G Q PK C
Sbjct: 377 PKLVGTQFPKAC 387

[Close]

BLAST of MS028289 vs. TAIR 10
Match: AT3G14040.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 374.4 bits (960), Expect = 1.2e-103
Identity = 197/404 (48.76%), Postives = 258/404 (63.86%), Query Frame = 0


Query: 20  ATAAPAKPAAPVGG--SGAAPAGGAGGVFDVAKYGAKPN--ADITQAVANAWKEACASTS 79
           A  A    AA VG   +GA P G +    DV   GAK +   D + A A AWKEACA  +
Sbjct: 46  AATAVGGAAASVGAKVTGAKPGGAS---LDVKASGAKGDGKTDDSAAFAAAWKEACA--A 105

Query: 80  PSKLLIPKGSYQLNGASFKGPCKSAIEIQVDGTLQAPPHPK----GEGWIMLEYIDQLTL 139
            S + +PKG Y +    FKGPCK  + ++++G  +AP   K      GWI  E +   TL
Sbjct: 106 GSTITVPKGEYLVESLEFKGPCKGPVTLELNGNFKAPATVKTTKPHAGWIDFENLADFTL 165

Query: 140 SGT-GVFDGQGKAGWEKNDCHLKKICTKLPMSLKFNFVTNSVVKDITSLDSKNFHINLLG 199
           +G   +FDGQG   W+ NDC     C  LP++++F  +TNS +  ITS +SK FH+N+L 
Sbjct: 166 NGNKAIFDGQGSLAWKANDCAKTGKCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILN 225

Query: 200 CKNVTFQHVTISAPDHSPNTDGIHISSSENINILNTNIGTGDDCISVGDSNSQITISDVT 259
           CKN+T   + I AP  S NTDGIHI  S  +N++   I TGDDC+S+GD    + + +V 
Sbjct: 226 CKNITLTDIGIDAPPESLNTDGIHIGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVE 285

Query: 260 CGPGHGISIGSLGKYSKEKDVIGVFVKKCKLTSTTNGVRIKTWPDSAGAFIASDMHFEDI 319
           CGPGHGISIGSLG+Y  E+ V GV V+KC + +T NGVRIKTWP S    IAS++ FEDI
Sbjct: 286 CGPGHGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNGVRIKTWPGSPPG-IASNILFEDI 345

Query: 320 EMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVAVKLVCSSSNPCE 379
            M NVS PV+IDQEYCP+  C   VPSK+K+S V+ KNI+GTSAT VAVKL+CS   PC 
Sbjct: 346 TMDNVSLPVLIDQEYCPYGHCKAGVPSKVKLSDVTIKNIKGTSATKVAVKLMCSKGVPCT 405

Query: 380 GVEVADINLTYNGKQGPIKSECANVKPTITGQQNPKICAEVAPP 415
            + ++DINL +NGK+GP  S C+N+KP ++G+  P  C EVA P
Sbjct: 406 NIALSDINLVHNGKEGPAVSACSNIKPILSGKLVPAACTEVAKP 443

The following BLAST results are available for this feature:

BLAST of MS028289 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022136075.1	6.4e-232	96.67	exopolygalacturonase-like [Momordica charantia]	[more]
KAA0045608.1	1.8e-186	77.43	exopolygalacturonase-like [Cucumis melo var. makuwa] >TYK02648.1 exopolygalactur...	[more]
KAA0045594.1	3.1e-186	77.14	exopolygalacturonase-like [Cucumis melo var. makuwa]	[more]
XP_011657634.1	2.6e-185	77.67	exopolygalacturonase [Cucumis sativus]	[more]
KAA0045593.1	2.6e-185	76.96	exopolygalacturonase-like [Cucumis melo var. makuwa] >TYK28803.1 exopolygalactur...	[more]

BLAST of MS028289 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q40312	4.1e-125	56.51	Polygalacturonase OS=Medicago sativa OX=3879 PE=2 SV=1	[more]
Q05967	1.6e-124	56.72	Polygalacturonase OS=Nicotiana tabacum OX=4097 GN=PG1 PE=2 SV=1	[more]
P24548	7.8e-124	58.71	Exopolygalacturonase (Fragment) OS=Oenothera organensis OX=3945 PE=2 SV=1	[more]
Q39766	1.7e-115	50.93	Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1	[more]
Q39786	2.3e-115	50.66	Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1	[more]

BLAST of MS028289 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C2U8	3.1e-232	96.67	exopolygalacturonase-like OS=Momordica charantia OX=3673 GN=LOC111007858 PE=3 SV...	[more]
A0A5A7TRZ0	8.8e-187	77.43	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A5A7TR51	1.5e-186	77.14	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A5D3DYI3	1.3e-185	76.96	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A6J1DCB0	1.7e-185	79.35	exopolygalacturonase-like OS=Momordica charantia OX=3673 GN=LOC111019177 PE=3 SV...	[more]

BLAST of MS028289 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07820.1	4.0e-115	51.90	Pectin lyase-like superfamily protein	[more]
AT3G07840.1	8.3e-113	51.35	Pectin lyase-like superfamily protein	[more]
AT5G48140.1	5.4e-112	52.53	Pectin lyase-like superfamily protein	[more]
AT3G07830.1	2.0e-111	50.27	Pectin lyase-like superfamily protein	[more]
AT3G14040.1	1.2e-103	48.76	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006626	Parallel beta-helix repeat	SMART	SM00710	pbh1	coord: 191..217 e-value: 2.7 score: 17.0 coord: 271..292 e-value: 630.0 score: 8.7 coord: 241..261 e-value: 4400.0 score: 2.6 coord: 218..239 e-value: 3900.0 score: 3.0
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 71..397 e-value: 6.0E-102 score: 341.0
IPR000743	Glycoside hydrolase, family 28	PROSITE	PS00502	POLYGALACTURONASE	coord: 248..261
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 29..416 e-value: 6.5E-108 score: 363.3
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 41..412
None	No IPR available	PANTHER	PTHR31375:SF248	POLYGALACTURONASE	coord: 41..412
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 42..410

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS028289.1	MS028289.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004650	polygalacturonase activity