MS028270 (gene) Bitter gourd (TR) v1

Overview
NameMS028270
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRNase H domain-containing protein
Locationscaffold47: 1681955 .. 1682629 (+)
RNA-Seq ExpressionMS028270
SyntenyMS028270
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTGGATTTTATTCGGGGGTGGAAGGAGCTAATTCCCTGGGCTGACTTGGAGCTTTTGTTGGTTATGTTATGGTCGATTTGGTGCGCACGGAATCGATCTATTTCGGTTTCTCATGCGGGTGGCTTACTCGAGGGGATCAGAGCATGGTCGGATAATTATCTTAGTATATATAAGCAGGCGCAGGGCGTTTCTCTCCATGAGGTGGATCAACCAAGGCAGCTTTGGGCCGGAGGTTGGAACCCACCGTTGAACCCCTTTCTCAAGGTGAATGTAGACGCGGCCGTCTCGAAAGAGGAGGGAGAAGGAGTGGGGGTTATCCTCCGAGATTCTTATGGGGTCGTCTATCTTGCTGCGGTTTGGCCCCTTTCTTTCATTCCAAGCGTCGATTGGGCGGAATGTTTCGCGGTTTTTGACGGTTTGCGACTAGGAGTGGAGGCTGGTGTGGACGATTCGGAGGTTGGGGTCCTGAGTTCTGTCATCAAAGAATTTCTTCATTCTCATAATATTCATGTCACGTTTAGTTTTACTCGCAGAGCCGGCAATACCACTGCTCATATGCTTGCTCGCCGGGCCGTATCTTCTCCTGGATTTCAAGTTTGGTTGGAGGAAGCGCCTCTGGAGCTTTCTGGAGCGTTGGAGGAGGACCGCGAGTTTTGTTTTCGCTTTATTTAA

mRNA sequence

ATGCTGGATTTTATTCGGGGGTGGAAGGAGCTAATTCCCTGGGCTGACTTGGAGCTTTTGTTGGTTATGTTATGGTCGATTTGGTGCGCACGGAATCGATCTATTTCGGTTTCTCATGCGGGTGGCTTACTCGAGGGGATCAGAGCATGGTCGGATAATTATCTTAGTATATATAAGCAGGCGCAGGGCGTTTCTCTCCATGAGGTGGATCAACCAAGGCAGCTTTGGGCCGGAGGTTGGAACCCACCGTTGAACCCCTTTCTCAAGGTGAATGTAGACGCGGCCGTCTCGAAAGAGGAGGGAGAAGGAGTGGGGGTTATCCTCCGAGATTCTTATGGGGTCGTCTATCTTGCTGCGGTTTGGCCCCTTTCTTTCATTCCAAGCGTCGATTGGGCGGAATGTTTCGCGGTTTTTGACGGTTTGCGACTAGGAGTGGAGGCTGGTGTGGACGATTCGGAGGTTGGGGTCCTGAGTTCTGTCATCAAAGAATTTCTTCATTCTCATAATATTCATGTCACGTTTAGTTTTACTCGCAGAGCCGGCAATACCACTGCTCATATGCTTGCTCGCCGGGCCGTATCTTCTCCTGGATTTCAAGTTTGGTTGGAGGAAGCGCCTCTGGAGCTTTCTGGAGCGTTGGAGGAGGACCGCGAGTTTTGTTTTCGCTTTATTTAA

Coding sequence (CDS)

ATGCTGGATTTTATTCGGGGGTGGAAGGAGCTAATTCCCTGGGCTGACTTGGAGCTTTTGTTGGTTATGTTATGGTCGATTTGGTGCGCACGGAATCGATCTATTTCGGTTTCTCATGCGGGTGGCTTACTCGAGGGGATCAGAGCATGGTCGGATAATTATCTTAGTATATATAAGCAGGCGCAGGGCGTTTCTCTCCATGAGGTGGATCAACCAAGGCAGCTTTGGGCCGGAGGTTGGAACCCACCGTTGAACCCCTTTCTCAAGGTGAATGTAGACGCGGCCGTCTCGAAAGAGGAGGGAGAAGGAGTGGGGGTTATCCTCCGAGATTCTTATGGGGTCGTCTATCTTGCTGCGGTTTGGCCCCTTTCTTTCATTCCAAGCGTCGATTGGGCGGAATGTTTCGCGGTTTTTGACGGTTTGCGACTAGGAGTGGAGGCTGGTGTGGACGATTCGGAGGTTGGGGTCCTGAGTTCTGTCATCAAAGAATTTCTTCATTCTCATAATATTCATGTCACGTTTAGTTTTACTCGCAGAGCCGGCAATACCACTGCTCATATGCTTGCTCGCCGGGCCGTATCTTCTCCTGGATTTCAAGTTTGGTTGGAGGAAGCGCCTCTGGAGCTTTCTGGAGCGTTGGAGGAGGACCGCGAGTTTTGTTTTCGCTTTATTTAA

Protein sequence

MLDFIRGWKELIPWADLELLLVMLWSIWCARNRSISVSHAGGLLEGIRAWSDNYLSIYKQAQGVSLHEVDQPRQLWAGGWNPPLNPFLKVNVDAAVSKEEGEGVGVILRDSYGVVYLAAVWPLSFIPSVDWAECFAVFDGLRLGVEAGVDDSEVGVLSSVIKEFLHSHNIHVTFSFTRRAGNTTAHMLARRAVSSPGFQVWLEEAPLELSGALEEDREFCFRFI
Homology
BLAST of MS028270 vs. NCBI nr
Match: XP_022135916.1 (uncharacterized protein LOC111007754 [Momordica charantia])

HSP 1 Score: 318.2 bits (814), Expect = 5.8e-83
Identity = 150/153 (98.04%), Postives = 151/153 (98.69%), Query Frame = 0

Query: 1   MLDFIRGWKELIPWADLELLLVMLWSIWCARNRSISVSHAGGLLEGIRAWSDNYLSIYKQ 60
           MLDFIRGWK LIPWADLELLLVMLWSIWCARNRSISVSHAGGLLEGIRAWSDNYLSIYKQ
Sbjct: 25  MLDFIRGWKVLIPWADLELLLVMLWSIWCARNRSISVSHAGGLLEGIRAWSDNYLSIYKQ 84

Query: 61  AQGVSLHEVDQPRQLWAGGWNPPLNPFLKVNVDAAVSKEEGEGVGVILRDSYGVVYLAAV 120
           AQGVSLHEVDQPRQLWAGGWNPPLNPFLKVNVDAAVSKEEG GVGVILRDSYGVVYLAAV
Sbjct: 85  AQGVSLHEVDQPRQLWAGGWNPPLNPFLKVNVDAAVSKEEGAGVGVILRDSYGVVYLAAV 144

Query: 121 WPLSFIPSVDWAECFAVFDGLRLGVEAGVDDSE 154
           WPLSFIPSVDWAECFAVFDGLRLGVEAG+DDSE
Sbjct: 145 WPLSFIPSVDWAECFAVFDGLRLGVEAGLDDSE 177

BLAST of MS028270 vs. NCBI nr
Match: XP_022150944.1 (uncharacterized protein LOC111018973 [Momordica charantia])

HSP 1 Score: 194.1 bits (492), Expect = 1.3e-45
Identity = 108/235 (45.96%), Postives = 139/235 (59.15%), Query Frame = 0

Query: 4   FIRGWKELIPWADLELLLVMLWSIWCARNRSISVSHAGGLLEGIRAWSDNYLSIYKQAQG 63
           F+R W +L+ W  +  ++V+LW+IW ARN++      GG L  + +WS+NYL +Y+ AQ 
Sbjct: 28  FMRVWTDLVSWQHIGAIVVLLWAIWNARNQTPQHFSLGGSLSDLVSWSENYLQVYQAAQR 87

Query: 64  VSLHEVDQPRQLWAGGWNPPLNPFLKVNVDAAVSKEE-GEGVGVILRDSYGVVYLAAVWP 123
            S   +   R      W PP  P LKVNVDAA  KE    GVGVI+RDS G+VYL A+  
Sbjct: 88  SSXSALVVCRPPRVAIWRPPAAPLLKVNVDAAFRKESFVAGVGVIIRDSTGLVYLTAIRL 147

Query: 124 LSFIPSVDWAECFAVFDGLRLGVEAG---------------------VDDSEVGVLSSVI 183
           L+    VDW E FAV++G+ L VEAG                     VDDSEVGVL SVI
Sbjct: 148 LARASDVDWVEGFAVYEGILLAVEAGFIRFQIETDSLRIFNLLTTDCVDDSEVGVLCSVI 207

Query: 184 KEFLHSHNIHVTFSFTRRAGNTTAHMLARRAVSSPGFQVWLEEAPLELSGALEED 217
           K FL SH   V+FSFT R GN  AH+LA+ A++SP  Q+W+EE P E+S  L  D
Sbjct: 208 KLFLSSHAERVSFSFTHRNGNAXAHLLAQLALTSPHLQIWVEEWPDEISSVLAVD 262

BLAST of MS028270 vs. NCBI nr
Match: XP_022135942.1 (uncharacterized protein LOC111007775 [Momordica charantia])

HSP 1 Score: 142.1 bits (357), Expect = 5.7e-30
Identity = 89/230 (38.70%), Postives = 123/230 (53.48%), Query Frame = 0

Query: 12  IPWADLELLLVMLWSIWCARNRSISVSHAGGLLEGIRAWSDNYLSIYKQAQ-GVSLHEVD 71
           I W  LE L V LW+IW ARN+S+  +  G LL  +  W  +YL +Y+ AQ G SL  + 
Sbjct: 4   IKWTGLEELSVFLWAIWNARNQSMFTNGHGFLLVNMVDWVADYLQVYQSAQEGPSLPLLL 63

Query: 72  QPRQLWAGGWNPPLNPFLKVNVDAAVSKEE-GEGVGVILRDSYGVVYLAAVWPLSFIPSV 131
             R      W PPL PF KVNVDAA  K     G+ +++RDS   V L+A+  ++ +  V
Sbjct: 64  DGRGGRVSAWCPPLAPFFKVNVDAAFKKGNFSAGLDILIRDSTVNVLLSAMCFITHVSDV 123

Query: 132 DWAECFAVFDGLRLGVEAGV---------------------DDSEVGVLSSVIKEFLHSH 191
             AEC A  +G+ L +EAG+                     D+SE+GVL+S I+  + S 
Sbjct: 124 TLAECLAAQEGVCLAIEAGLIPFQIETDSSQVFNLLRTDCEDESEIGVLASSIRHIVSSL 183

Query: 192 NIHVTFSFTRRAGNTTAHMLARRAVSSPGFQVWLEEAPLELSGALEEDRE 219
           +I   FSF  R GN+ AH LAR  + S  F VW+EE   +LS  +  DR+
Sbjct: 184 HIGGGFSFVNREGNSGAHTLARMGMVSESFHVWVEEWLSDLSEVIAADRQ 233

BLAST of MS028270 vs. NCBI nr
Match: XP_022150918.1 (uncharacterized protein LOC111018954 [Momordica charantia])

HSP 1 Score: 111.7 bits (278), Expect = 8.3e-21
Identity = 74/220 (33.64%), Postives = 115/220 (52.27%), Query Frame = 0

Query: 5    IRGWKELIPWADLELLLVMLWSIWCARN-RSISVSHAGGLLEGIR--AWSDNYLSIYKQA 64
            +R   E +  AD E L V++W +W  RN R+ + S       G+    W++ Y   +++A
Sbjct: 915  LRESHESLSKADFEELCVVIWGLWNQRNARAFNDSTKTVFKIGMELVEWANKYAMEFREA 974

Query: 65   QGVSL-HEVDQPRQLWAGGWNPPLNPFLKVNVDAA-VSKEEGEGVGVILRDSYGVVYLAA 124
            +   +   V    ++    W PP     K+N DA+ ++ ++  G+G+I+ +  G V  AA
Sbjct: 975  KSNPITGRVTNTAEIL---WQPPDEGIYKINTDASFLASDQHAGLGIIIHNDRGQVMAAA 1034

Query: 125  VWPLSFIPSVDWAECFAVFDGLRLGVEAGV-----DDSEVGVLSSVIKEFLHSHNIHVTF 184
               L  I SVD AE  A  +GL+L  E G+     D SE G +    K F  + ++H +F
Sbjct: 1035 TKYLENIQSVDMAEAIAAVEGLQLASEIGMHPALEDLSETGEIVLKAKNF-WTQSLHASF 1094

Query: 185  SFTRRAGNTTAHMLARRAVSSPGFQVWLEEAPLELSGALE 215
            +F +R GN  AHMLARRA+    F +W+E+ PLEL   LE
Sbjct: 1095 NFVKREGNKAAHMLARRALLLHEFSIWMEDWPLELKSCLE 1130

BLAST of MS028270 vs. NCBI nr
Match: XP_030940241.1 (uncharacterized protein LOC115965200 [Quercus lobata])

HSP 1 Score: 98.2 bits (243), Expect = 9.5e-17
Identity = 78/237 (32.91%), Postives = 112/237 (47.26%), Query Frame = 0

Query: 8   WKELIPWAD-----LELLLVMLWSIWCARNRSISVSHAGGLLEGIRAWSDNYLSIYKQAQ 67
           +KEL+ W       LE+  V +WSIW  RNR + ++     +  I   S  +L+ Y QA+
Sbjct: 59  FKELLSWIIKHTQLLEVFAVTVWSIWNQRNR-VRLNQTADAIHQIAFLSKKWLAEY-QAR 118

Query: 68  GVSLHEVDQPRQLWAGGWNPPLNPFLKVNVDAA-VSKEEGEGVGVILRDSYGVVY----- 127
            +S + V    Q     W PP +   K+N D A    E+  G+GV++RDS G+V      
Sbjct: 119 QISPNLVPMRTQPTICKWQPPPSGTFKINFDGANFPTEKKSGLGVVIRDSRGLVIASCSK 178

Query: 128 -------------LAAVWPLSFIPSVDWAECFAVFDGLRLGVEAGV-DDSEVGVLSSVIK 187
                        +AA W LSF  + D     AV +G  L V AG+ +D  V V   ++ 
Sbjct: 179 VVHQMLGASEVEAMAATWALSF--AADVGVNRAVLEGDSLDVIAGLREDRMVLVPYGLLL 238

Query: 188 E---FLHSHNIHVTFSFTRRAGNTTAHMLARRAVSSPGFQVWLEEAPLELSGALEED 217
           E   FL      + +S T+R GN  AH LAR AV  P F VW+E+ P +     + D
Sbjct: 239 EEARFLSQQFDELRYSHTKREGNKLAHSLARHAVGIPDFLVWMEDVPPQFYSVFQTD 291

BLAST of MS028270 vs. ExPASy TrEMBL
Match: A0A6J1C225 (uncharacterized protein LOC111007754 OS=Momordica charantia OX=3673 GN=LOC111007754 PE=4 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 2.8e-83
Identity = 150/153 (98.04%), Postives = 151/153 (98.69%), Query Frame = 0

Query: 1   MLDFIRGWKELIPWADLELLLVMLWSIWCARNRSISVSHAGGLLEGIRAWSDNYLSIYKQ 60
           MLDFIRGWK LIPWADLELLLVMLWSIWCARNRSISVSHAGGLLEGIRAWSDNYLSIYKQ
Sbjct: 25  MLDFIRGWKVLIPWADLELLLVMLWSIWCARNRSISVSHAGGLLEGIRAWSDNYLSIYKQ 84

Query: 61  AQGVSLHEVDQPRQLWAGGWNPPLNPFLKVNVDAAVSKEEGEGVGVILRDSYGVVYLAAV 120
           AQGVSLHEVDQPRQLWAGGWNPPLNPFLKVNVDAAVSKEEG GVGVILRDSYGVVYLAAV
Sbjct: 85  AQGVSLHEVDQPRQLWAGGWNPPLNPFLKVNVDAAVSKEEGAGVGVILRDSYGVVYLAAV 144

Query: 121 WPLSFIPSVDWAECFAVFDGLRLGVEAGVDDSE 154
           WPLSFIPSVDWAECFAVFDGLRLGVEAG+DDSE
Sbjct: 145 WPLSFIPSVDWAECFAVFDGLRLGVEAGLDDSE 177

BLAST of MS028270 vs. ExPASy TrEMBL
Match: A0A6J1DBJ7 (uncharacterized protein LOC111018973 OS=Momordica charantia OX=3673 GN=LOC111018973 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 6.2e-46
Identity = 108/235 (45.96%), Postives = 139/235 (59.15%), Query Frame = 0

Query: 4   FIRGWKELIPWADLELLLVMLWSIWCARNRSISVSHAGGLLEGIRAWSDNYLSIYKQAQG 63
           F+R W +L+ W  +  ++V+LW+IW ARN++      GG L  + +WS+NYL +Y+ AQ 
Sbjct: 28  FMRVWTDLVSWQHIGAIVVLLWAIWNARNQTPQHFSLGGSLSDLVSWSENYLQVYQAAQR 87

Query: 64  VSLHEVDQPRQLWAGGWNPPLNPFLKVNVDAAVSKEE-GEGVGVILRDSYGVVYLAAVWP 123
            S   +   R      W PP  P LKVNVDAA  KE    GVGVI+RDS G+VYL A+  
Sbjct: 88  SSXSALVVCRPPRVAIWRPPAAPLLKVNVDAAFRKESFVAGVGVIIRDSTGLVYLTAIRL 147

Query: 124 LSFIPSVDWAECFAVFDGLRLGVEAG---------------------VDDSEVGVLSSVI 183
           L+    VDW E FAV++G+ L VEAG                     VDDSEVGVL SVI
Sbjct: 148 LARASDVDWVEGFAVYEGILLAVEAGFIRFQIETDSLRIFNLLTTDCVDDSEVGVLCSVI 207

Query: 184 KEFLHSHNIHVTFSFTRRAGNTTAHMLARRAVSSPGFQVWLEEAPLELSGALEED 217
           K FL SH   V+FSFT R GN  AH+LA+ A++SP  Q+W+EE P E+S  L  D
Sbjct: 208 KLFLSSHAERVSFSFTHRNGNAXAHLLAQLALTSPHLQIWVEEWPDEISSVLAVD 262

BLAST of MS028270 vs. ExPASy TrEMBL
Match: A0A6J1C467 (uncharacterized protein LOC111007775 OS=Momordica charantia OX=3673 GN=LOC111007775 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 2.8e-30
Identity = 89/230 (38.70%), Postives = 123/230 (53.48%), Query Frame = 0

Query: 12  IPWADLELLLVMLWSIWCARNRSISVSHAGGLLEGIRAWSDNYLSIYKQAQ-GVSLHEVD 71
           I W  LE L V LW+IW ARN+S+  +  G LL  +  W  +YL +Y+ AQ G SL  + 
Sbjct: 4   IKWTGLEELSVFLWAIWNARNQSMFTNGHGFLLVNMVDWVADYLQVYQSAQEGPSLPLLL 63

Query: 72  QPRQLWAGGWNPPLNPFLKVNVDAAVSKEE-GEGVGVILRDSYGVVYLAAVWPLSFIPSV 131
             R      W PPL PF KVNVDAA  K     G+ +++RDS   V L+A+  ++ +  V
Sbjct: 64  DGRGGRVSAWCPPLAPFFKVNVDAAFKKGNFSAGLDILIRDSTVNVLLSAMCFITHVSDV 123

Query: 132 DWAECFAVFDGLRLGVEAGV---------------------DDSEVGVLSSVIKEFLHSH 191
             AEC A  +G+ L +EAG+                     D+SE+GVL+S I+  + S 
Sbjct: 124 TLAECLAAQEGVCLAIEAGLIPFQIETDSSQVFNLLRTDCEDESEIGVLASSIRHIVSSL 183

Query: 192 NIHVTFSFTRRAGNTTAHMLARRAVSSPGFQVWLEEAPLELSGALEEDRE 219
           +I   FSF  R GN+ AH LAR  + S  F VW+EE   +LS  +  DR+
Sbjct: 184 HIGGGFSFVNREGNSGAHTLARMGMVSESFHVWVEEWLSDLSEVIAADRQ 233

BLAST of MS028270 vs. ExPASy TrEMBL
Match: A0A6J1DAR4 (uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018954 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 4.0e-21
Identity = 74/220 (33.64%), Postives = 115/220 (52.27%), Query Frame = 0

Query: 5    IRGWKELIPWADLELLLVMLWSIWCARN-RSISVSHAGGLLEGIR--AWSDNYLSIYKQA 64
            +R   E +  AD E L V++W +W  RN R+ + S       G+    W++ Y   +++A
Sbjct: 915  LRESHESLSKADFEELCVVIWGLWNQRNARAFNDSTKTVFKIGMELVEWANKYAMEFREA 974

Query: 65   QGVSL-HEVDQPRQLWAGGWNPPLNPFLKVNVDAA-VSKEEGEGVGVILRDSYGVVYLAA 124
            +   +   V    ++    W PP     K+N DA+ ++ ++  G+G+I+ +  G V  AA
Sbjct: 975  KSNPITGRVTNTAEIL---WQPPDEGIYKINTDASFLASDQHAGLGIIIHNDRGQVMAAA 1034

Query: 125  VWPLSFIPSVDWAECFAVFDGLRLGVEAGV-----DDSEVGVLSSVIKEFLHSHNIHVTF 184
               L  I SVD AE  A  +GL+L  E G+     D SE G +    K F  + ++H +F
Sbjct: 1035 TKYLENIQSVDMAEAIAAVEGLQLASEIGMHPALEDLSETGEIVLKAKNF-WTQSLHASF 1094

Query: 185  SFTRRAGNTTAHMLARRAVSSPGFQVWLEEAPLELSGALE 215
            +F +R GN  AHMLARRA+    F +W+E+ PLEL   LE
Sbjct: 1095 NFVKREGNKAAHMLARRALLLHEFSIWMEDWPLELKSCLE 1130

BLAST of MS028270 vs. ExPASy TrEMBL
Match: A0A6J1CDQ4 (uncharacterized protein LOC111010533 OS=Momordica charantia OX=3673 GN=LOC111010533 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 3.9e-16
Identity = 70/229 (30.57%), Postives = 108/229 (47.16%), Query Frame = 0

Query: 1   MLDFIRGWKELIPWADLELLLVMLWSIWCARNRSISVSHAGGLLEGIRAWSDNYLSIYKQ 60
           M++ +R W++++ W D E L+V LWS+W  RN  +  +      + +  W   Y++ +K 
Sbjct: 1   MINILRDWRDMLNWKDFEELVVFLWSLWNRRNAFV-FNKRRVEDDDLAGWVSTYIATFKA 60

Query: 61  A--------QGVSLHEVDQPRQLWAGG----WNPPLNPFLKVNVDAAVSK-EEGEGVGV- 120
                    Q VS     Q  Q+        W P      K+  DA+ S  +   G+GV 
Sbjct: 61  TNTNHATANQDVS-QSFQQSSQIHQAQNHTIWCPAEEGVFKLKTDASFSSIDFNAGLGVI 120

Query: 121 ILRDSYGVVYLAAVWPLSFIPSVDWAECFAVFDGLRLGVEAGVD---------------- 180
           I+RD  G V  +A   L  + SVD AE  A  +GLR+ +E G+                 
Sbjct: 121 IIRDHRGQVLASATKYLEHVASVDDAEALAAVEGLRVAMETGISPILLETDSLRIYNLFA 180

Query: 181 -DSEVGVLSSVIKEFLHSH---NIHVTFSFTRRAGNTTAHMLARRAVSS 196
            D E    +  I E++ +H    + V++SFT+R GNT AH+LARRA+ S
Sbjct: 181 RDKEGLSKTGSIIEYVKTHLATRLQVSYSFTKRTGNTIAHLLARRALQS 227

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022135916.15.8e-8398.04uncharacterized protein LOC111007754 [Momordica charantia][more]
XP_022150944.11.3e-4545.96uncharacterized protein LOC111018973 [Momordica charantia][more]
XP_022135942.15.7e-3038.70uncharacterized protein LOC111007775 [Momordica charantia][more]
XP_022150918.18.3e-2133.64uncharacterized protein LOC111018954 [Momordica charantia][more]
XP_030940241.19.5e-1732.91uncharacterized protein LOC115965200 [Quercus lobata][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1C2252.8e-8398.04uncharacterized protein LOC111007754 OS=Momordica charantia OX=3673 GN=LOC111007... [more]
A0A6J1DBJ76.2e-4645.96uncharacterized protein LOC111018973 OS=Momordica charantia OX=3673 GN=LOC111018... [more]
A0A6J1C4672.8e-3038.70uncharacterized protein LOC111007775 OS=Momordica charantia OX=3673 GN=LOC111007... [more]
A0A6J1DAR44.0e-2133.64uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018... [more]
A0A6J1CDQ43.9e-1630.57uncharacterized protein LOC111010533 OS=Momordica charantia OX=3673 GN=LOC111010... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002156Ribonuclease H domainPFAMPF13456RVT_3coord: 91..166
e-value: 9.0E-6
score: 25.5
NoneNo IPR availablePANTHERPTHR33033POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 73..204
NoneNo IPR availablePANTHERPTHR33033:SF73SUBFAMILY NOT NAMEDcoord: 73..204

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS028270.1MS028270.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity