Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTGGATTTTATTCGGGGGTGGAAGGAGCTAATTCCCTGGGCTGACTTGGAGCTTTTGTTGGTTATGTTATGGTCGATTTGGTGCGCACGGAATCGATCTATTTCGGTTTCTCATGCGGGTGGCTTACTCGAGGGGATCAGAGCATGGTCGGATAATTATCTTAGTATATATAAGCAGGCGCAGGGCGTTTCTCTCCATGAGGTGGATCAACCAAGGCAGCTTTGGGCCGGAGGTTGGAACCCACCGTTGAACCCCTTTCTCAAGGTGAATGTAGACGCGGCCGTCTCGAAAGAGGAGGGAGAAGGAGTGGGGGTTATCCTCCGAGATTCTTATGGGGTCGTCTATCTTGCTGCGGTTTGGCCCCTTTCTTTCATTCCAAGCGTCGATTGGGCGGAATGTTTCGCGGTTTTTGACGGTTTGCGACTAGGAGTGGAGGCTGGTGTGGACGATTCGGAGGTTGGGGTCCTGAGTTCTGTCATCAAAGAATTTCTTCATTCTCATAATATTCATGTCACGTTTAGTTTTACTCGCAGAGCCGGCAATACCACTGCTCATATGCTTGCTCGCCGGGCCGTATCTTCTCCTGGATTTCAAGTTTGGTTGGAGGAAGCGCCTCTGGAGCTTTCTGGAGCGTTGGAGGAGGACCGCGAGTTTTGTTTTCGCTTTATTTAA
mRNA sequence
ATGCTGGATTTTATTCGGGGGTGGAAGGAGCTAATTCCCTGGGCTGACTTGGAGCTTTTGTTGGTTATGTTATGGTCGATTTGGTGCGCACGGAATCGATCTATTTCGGTTTCTCATGCGGGTGGCTTACTCGAGGGGATCAGAGCATGGTCGGATAATTATCTTAGTATATATAAGCAGGCGCAGGGCGTTTCTCTCCATGAGGTGGATCAACCAAGGCAGCTTTGGGCCGGAGGTTGGAACCCACCGTTGAACCCCTTTCTCAAGGTGAATGTAGACGCGGCCGTCTCGAAAGAGGAGGGAGAAGGAGTGGGGGTTATCCTCCGAGATTCTTATGGGGTCGTCTATCTTGCTGCGGTTTGGCCCCTTTCTTTCATTCCAAGCGTCGATTGGGCGGAATGTTTCGCGGTTTTTGACGGTTTGCGACTAGGAGTGGAGGCTGGTGTGGACGATTCGGAGGTTGGGGTCCTGAGTTCTGTCATCAAAGAATTTCTTCATTCTCATAATATTCATGTCACGTTTAGTTTTACTCGCAGAGCCGGCAATACCACTGCTCATATGCTTGCTCGCCGGGCCGTATCTTCTCCTGGATTTCAAGTTTGGTTGGAGGAAGCGCCTCTGGAGCTTTCTGGAGCGTTGGAGGAGGACCGCGAGTTTTGTTTTCGCTTTATTTAA
Coding sequence (CDS)
ATGCTGGATTTTATTCGGGGGTGGAAGGAGCTAATTCCCTGGGCTGACTTGGAGCTTTTGTTGGTTATGTTATGGTCGATTTGGTGCGCACGGAATCGATCTATTTCGGTTTCTCATGCGGGTGGCTTACTCGAGGGGATCAGAGCATGGTCGGATAATTATCTTAGTATATATAAGCAGGCGCAGGGCGTTTCTCTCCATGAGGTGGATCAACCAAGGCAGCTTTGGGCCGGAGGTTGGAACCCACCGTTGAACCCCTTTCTCAAGGTGAATGTAGACGCGGCCGTCTCGAAAGAGGAGGGAGAAGGAGTGGGGGTTATCCTCCGAGATTCTTATGGGGTCGTCTATCTTGCTGCGGTTTGGCCCCTTTCTTTCATTCCAAGCGTCGATTGGGCGGAATGTTTCGCGGTTTTTGACGGTTTGCGACTAGGAGTGGAGGCTGGTGTGGACGATTCGGAGGTTGGGGTCCTGAGTTCTGTCATCAAAGAATTTCTTCATTCTCATAATATTCATGTCACGTTTAGTTTTACTCGCAGAGCCGGCAATACCACTGCTCATATGCTTGCTCGCCGGGCCGTATCTTCTCCTGGATTTCAAGTTTGGTTGGAGGAAGCGCCTCTGGAGCTTTCTGGAGCGTTGGAGGAGGACCGCGAGTTTTGTTTTCGCTTTATTTAA
Protein sequence
MLDFIRGWKELIPWADLELLLVMLWSIWCARNRSISVSHAGGLLEGIRAWSDNYLSIYKQAQGVSLHEVDQPRQLWAGGWNPPLNPFLKVNVDAAVSKEEGEGVGVILRDSYGVVYLAAVWPLSFIPSVDWAECFAVFDGLRLGVEAGVDDSEVGVLSSVIKEFLHSHNIHVTFSFTRRAGNTTAHMLARRAVSSPGFQVWLEEAPLELSGALEEDREFCFRFI
Homology
BLAST of MS028270 vs. NCBI nr
Match:
XP_022135916.1 (uncharacterized protein LOC111007754 [Momordica charantia])
HSP 1 Score: 318.2 bits (814), Expect = 5.8e-83
Identity = 150/153 (98.04%), Postives = 151/153 (98.69%), Query Frame = 0
Query: 1 MLDFIRGWKELIPWADLELLLVMLWSIWCARNRSISVSHAGGLLEGIRAWSDNYLSIYKQ 60
MLDFIRGWK LIPWADLELLLVMLWSIWCARNRSISVSHAGGLLEGIRAWSDNYLSIYKQ
Sbjct: 25 MLDFIRGWKVLIPWADLELLLVMLWSIWCARNRSISVSHAGGLLEGIRAWSDNYLSIYKQ 84
Query: 61 AQGVSLHEVDQPRQLWAGGWNPPLNPFLKVNVDAAVSKEEGEGVGVILRDSYGVVYLAAV 120
AQGVSLHEVDQPRQLWAGGWNPPLNPFLKVNVDAAVSKEEG GVGVILRDSYGVVYLAAV
Sbjct: 85 AQGVSLHEVDQPRQLWAGGWNPPLNPFLKVNVDAAVSKEEGAGVGVILRDSYGVVYLAAV 144
Query: 121 WPLSFIPSVDWAECFAVFDGLRLGVEAGVDDSE 154
WPLSFIPSVDWAECFAVFDGLRLGVEAG+DDSE
Sbjct: 145 WPLSFIPSVDWAECFAVFDGLRLGVEAGLDDSE 177
BLAST of MS028270 vs. NCBI nr
Match:
XP_022150944.1 (uncharacterized protein LOC111018973 [Momordica charantia])
HSP 1 Score: 194.1 bits (492), Expect = 1.3e-45
Identity = 108/235 (45.96%), Postives = 139/235 (59.15%), Query Frame = 0
Query: 4 FIRGWKELIPWADLELLLVMLWSIWCARNRSISVSHAGGLLEGIRAWSDNYLSIYKQAQG 63
F+R W +L+ W + ++V+LW+IW ARN++ GG L + +WS+NYL +Y+ AQ
Sbjct: 28 FMRVWTDLVSWQHIGAIVVLLWAIWNARNQTPQHFSLGGSLSDLVSWSENYLQVYQAAQR 87
Query: 64 VSLHEVDQPRQLWAGGWNPPLNPFLKVNVDAAVSKEE-GEGVGVILRDSYGVVYLAAVWP 123
S + R W PP P LKVNVDAA KE GVGVI+RDS G+VYL A+
Sbjct: 88 SSXSALVVCRPPRVAIWRPPAAPLLKVNVDAAFRKESFVAGVGVIIRDSTGLVYLTAIRL 147
Query: 124 LSFIPSVDWAECFAVFDGLRLGVEAG---------------------VDDSEVGVLSSVI 183
L+ VDW E FAV++G+ L VEAG VDDSEVGVL SVI
Sbjct: 148 LARASDVDWVEGFAVYEGILLAVEAGFIRFQIETDSLRIFNLLTTDCVDDSEVGVLCSVI 207
Query: 184 KEFLHSHNIHVTFSFTRRAGNTTAHMLARRAVSSPGFQVWLEEAPLELSGALEED 217
K FL SH V+FSFT R GN AH+LA+ A++SP Q+W+EE P E+S L D
Sbjct: 208 KLFLSSHAERVSFSFTHRNGNAXAHLLAQLALTSPHLQIWVEEWPDEISSVLAVD 262
BLAST of MS028270 vs. NCBI nr
Match:
XP_022135942.1 (uncharacterized protein LOC111007775 [Momordica charantia])
HSP 1 Score: 142.1 bits (357), Expect = 5.7e-30
Identity = 89/230 (38.70%), Postives = 123/230 (53.48%), Query Frame = 0
Query: 12 IPWADLELLLVMLWSIWCARNRSISVSHAGGLLEGIRAWSDNYLSIYKQAQ-GVSLHEVD 71
I W LE L V LW+IW ARN+S+ + G LL + W +YL +Y+ AQ G SL +
Sbjct: 4 IKWTGLEELSVFLWAIWNARNQSMFTNGHGFLLVNMVDWVADYLQVYQSAQEGPSLPLLL 63
Query: 72 QPRQLWAGGWNPPLNPFLKVNVDAAVSKEE-GEGVGVILRDSYGVVYLAAVWPLSFIPSV 131
R W PPL PF KVNVDAA K G+ +++RDS V L+A+ ++ + V
Sbjct: 64 DGRGGRVSAWCPPLAPFFKVNVDAAFKKGNFSAGLDILIRDSTVNVLLSAMCFITHVSDV 123
Query: 132 DWAECFAVFDGLRLGVEAGV---------------------DDSEVGVLSSVIKEFLHSH 191
AEC A +G+ L +EAG+ D+SE+GVL+S I+ + S
Sbjct: 124 TLAECLAAQEGVCLAIEAGLIPFQIETDSSQVFNLLRTDCEDESEIGVLASSIRHIVSSL 183
Query: 192 NIHVTFSFTRRAGNTTAHMLARRAVSSPGFQVWLEEAPLELSGALEEDRE 219
+I FSF R GN+ AH LAR + S F VW+EE +LS + DR+
Sbjct: 184 HIGGGFSFVNREGNSGAHTLARMGMVSESFHVWVEEWLSDLSEVIAADRQ 233
BLAST of MS028270 vs. NCBI nr
Match:
XP_022150918.1 (uncharacterized protein LOC111018954 [Momordica charantia])
HSP 1 Score: 111.7 bits (278), Expect = 8.3e-21
Identity = 74/220 (33.64%), Postives = 115/220 (52.27%), Query Frame = 0
Query: 5 IRGWKELIPWADLELLLVMLWSIWCARN-RSISVSHAGGLLEGIR--AWSDNYLSIYKQA 64
+R E + AD E L V++W +W RN R+ + S G+ W++ Y +++A
Sbjct: 915 LRESHESLSKADFEELCVVIWGLWNQRNARAFNDSTKTVFKIGMELVEWANKYAMEFREA 974
Query: 65 QGVSL-HEVDQPRQLWAGGWNPPLNPFLKVNVDAA-VSKEEGEGVGVILRDSYGVVYLAA 124
+ + V ++ W PP K+N DA+ ++ ++ G+G+I+ + G V AA
Sbjct: 975 KSNPITGRVTNTAEIL---WQPPDEGIYKINTDASFLASDQHAGLGIIIHNDRGQVMAAA 1034
Query: 125 VWPLSFIPSVDWAECFAVFDGLRLGVEAGV-----DDSEVGVLSSVIKEFLHSHNIHVTF 184
L I SVD AE A +GL+L E G+ D SE G + K F + ++H +F
Sbjct: 1035 TKYLENIQSVDMAEAIAAVEGLQLASEIGMHPALEDLSETGEIVLKAKNF-WTQSLHASF 1094
Query: 185 SFTRRAGNTTAHMLARRAVSSPGFQVWLEEAPLELSGALE 215
+F +R GN AHMLARRA+ F +W+E+ PLEL LE
Sbjct: 1095 NFVKREGNKAAHMLARRALLLHEFSIWMEDWPLELKSCLE 1130
BLAST of MS028270 vs. NCBI nr
Match:
XP_030940241.1 (uncharacterized protein LOC115965200 [Quercus lobata])
HSP 1 Score: 98.2 bits (243), Expect = 9.5e-17
Identity = 78/237 (32.91%), Postives = 112/237 (47.26%), Query Frame = 0
Query: 8 WKELIPWAD-----LELLLVMLWSIWCARNRSISVSHAGGLLEGIRAWSDNYLSIYKQAQ 67
+KEL+ W LE+ V +WSIW RNR + ++ + I S +L+ Y QA+
Sbjct: 59 FKELLSWIIKHTQLLEVFAVTVWSIWNQRNR-VRLNQTADAIHQIAFLSKKWLAEY-QAR 118
Query: 68 GVSLHEVDQPRQLWAGGWNPPLNPFLKVNVDAA-VSKEEGEGVGVILRDSYGVVY----- 127
+S + V Q W PP + K+N D A E+ G+GV++RDS G+V
Sbjct: 119 QISPNLVPMRTQPTICKWQPPPSGTFKINFDGANFPTEKKSGLGVVIRDSRGLVIASCSK 178
Query: 128 -------------LAAVWPLSFIPSVDWAECFAVFDGLRLGVEAGV-DDSEVGVLSSVIK 187
+AA W LSF + D AV +G L V AG+ +D V V ++
Sbjct: 179 VVHQMLGASEVEAMAATWALSF--AADVGVNRAVLEGDSLDVIAGLREDRMVLVPYGLLL 238
Query: 188 E---FLHSHNIHVTFSFTRRAGNTTAHMLARRAVSSPGFQVWLEEAPLELSGALEED 217
E FL + +S T+R GN AH LAR AV P F VW+E+ P + + D
Sbjct: 239 EEARFLSQQFDELRYSHTKREGNKLAHSLARHAVGIPDFLVWMEDVPPQFYSVFQTD 291
BLAST of MS028270 vs. ExPASy TrEMBL
Match:
A0A6J1C225 (uncharacterized protein LOC111007754 OS=Momordica charantia OX=3673 GN=LOC111007754 PE=4 SV=1)
HSP 1 Score: 318.2 bits (814), Expect = 2.8e-83
Identity = 150/153 (98.04%), Postives = 151/153 (98.69%), Query Frame = 0
Query: 1 MLDFIRGWKELIPWADLELLLVMLWSIWCARNRSISVSHAGGLLEGIRAWSDNYLSIYKQ 60
MLDFIRGWK LIPWADLELLLVMLWSIWCARNRSISVSHAGGLLEGIRAWSDNYLSIYKQ
Sbjct: 25 MLDFIRGWKVLIPWADLELLLVMLWSIWCARNRSISVSHAGGLLEGIRAWSDNYLSIYKQ 84
Query: 61 AQGVSLHEVDQPRQLWAGGWNPPLNPFLKVNVDAAVSKEEGEGVGVILRDSYGVVYLAAV 120
AQGVSLHEVDQPRQLWAGGWNPPLNPFLKVNVDAAVSKEEG GVGVILRDSYGVVYLAAV
Sbjct: 85 AQGVSLHEVDQPRQLWAGGWNPPLNPFLKVNVDAAVSKEEGAGVGVILRDSYGVVYLAAV 144
Query: 121 WPLSFIPSVDWAECFAVFDGLRLGVEAGVDDSE 154
WPLSFIPSVDWAECFAVFDGLRLGVEAG+DDSE
Sbjct: 145 WPLSFIPSVDWAECFAVFDGLRLGVEAGLDDSE 177
BLAST of MS028270 vs. ExPASy TrEMBL
Match:
A0A6J1DBJ7 (uncharacterized protein LOC111018973 OS=Momordica charantia OX=3673 GN=LOC111018973 PE=4 SV=1)
HSP 1 Score: 194.1 bits (492), Expect = 6.2e-46
Identity = 108/235 (45.96%), Postives = 139/235 (59.15%), Query Frame = 0
Query: 4 FIRGWKELIPWADLELLLVMLWSIWCARNRSISVSHAGGLLEGIRAWSDNYLSIYKQAQG 63
F+R W +L+ W + ++V+LW+IW ARN++ GG L + +WS+NYL +Y+ AQ
Sbjct: 28 FMRVWTDLVSWQHIGAIVVLLWAIWNARNQTPQHFSLGGSLSDLVSWSENYLQVYQAAQR 87
Query: 64 VSLHEVDQPRQLWAGGWNPPLNPFLKVNVDAAVSKEE-GEGVGVILRDSYGVVYLAAVWP 123
S + R W PP P LKVNVDAA KE GVGVI+RDS G+VYL A+
Sbjct: 88 SSXSALVVCRPPRVAIWRPPAAPLLKVNVDAAFRKESFVAGVGVIIRDSTGLVYLTAIRL 147
Query: 124 LSFIPSVDWAECFAVFDGLRLGVEAG---------------------VDDSEVGVLSSVI 183
L+ VDW E FAV++G+ L VEAG VDDSEVGVL SVI
Sbjct: 148 LARASDVDWVEGFAVYEGILLAVEAGFIRFQIETDSLRIFNLLTTDCVDDSEVGVLCSVI 207
Query: 184 KEFLHSHNIHVTFSFTRRAGNTTAHMLARRAVSSPGFQVWLEEAPLELSGALEED 217
K FL SH V+FSFT R GN AH+LA+ A++SP Q+W+EE P E+S L D
Sbjct: 208 KLFLSSHAERVSFSFTHRNGNAXAHLLAQLALTSPHLQIWVEEWPDEISSVLAVD 262
BLAST of MS028270 vs. ExPASy TrEMBL
Match:
A0A6J1C467 (uncharacterized protein LOC111007775 OS=Momordica charantia OX=3673 GN=LOC111007775 PE=4 SV=1)
HSP 1 Score: 142.1 bits (357), Expect = 2.8e-30
Identity = 89/230 (38.70%), Postives = 123/230 (53.48%), Query Frame = 0
Query: 12 IPWADLELLLVMLWSIWCARNRSISVSHAGGLLEGIRAWSDNYLSIYKQAQ-GVSLHEVD 71
I W LE L V LW+IW ARN+S+ + G LL + W +YL +Y+ AQ G SL +
Sbjct: 4 IKWTGLEELSVFLWAIWNARNQSMFTNGHGFLLVNMVDWVADYLQVYQSAQEGPSLPLLL 63
Query: 72 QPRQLWAGGWNPPLNPFLKVNVDAAVSKEE-GEGVGVILRDSYGVVYLAAVWPLSFIPSV 131
R W PPL PF KVNVDAA K G+ +++RDS V L+A+ ++ + V
Sbjct: 64 DGRGGRVSAWCPPLAPFFKVNVDAAFKKGNFSAGLDILIRDSTVNVLLSAMCFITHVSDV 123
Query: 132 DWAECFAVFDGLRLGVEAGV---------------------DDSEVGVLSSVIKEFLHSH 191
AEC A +G+ L +EAG+ D+SE+GVL+S I+ + S
Sbjct: 124 TLAECLAAQEGVCLAIEAGLIPFQIETDSSQVFNLLRTDCEDESEIGVLASSIRHIVSSL 183
Query: 192 NIHVTFSFTRRAGNTTAHMLARRAVSSPGFQVWLEEAPLELSGALEEDRE 219
+I FSF R GN+ AH LAR + S F VW+EE +LS + DR+
Sbjct: 184 HIGGGFSFVNREGNSGAHTLARMGMVSESFHVWVEEWLSDLSEVIAADRQ 233
BLAST of MS028270 vs. ExPASy TrEMBL
Match:
A0A6J1DAR4 (uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018954 PE=4 SV=1)
HSP 1 Score: 111.7 bits (278), Expect = 4.0e-21
Identity = 74/220 (33.64%), Postives = 115/220 (52.27%), Query Frame = 0
Query: 5 IRGWKELIPWADLELLLVMLWSIWCARN-RSISVSHAGGLLEGIR--AWSDNYLSIYKQA 64
+R E + AD E L V++W +W RN R+ + S G+ W++ Y +++A
Sbjct: 915 LRESHESLSKADFEELCVVIWGLWNQRNARAFNDSTKTVFKIGMELVEWANKYAMEFREA 974
Query: 65 QGVSL-HEVDQPRQLWAGGWNPPLNPFLKVNVDAA-VSKEEGEGVGVILRDSYGVVYLAA 124
+ + V ++ W PP K+N DA+ ++ ++ G+G+I+ + G V AA
Sbjct: 975 KSNPITGRVTNTAEIL---WQPPDEGIYKINTDASFLASDQHAGLGIIIHNDRGQVMAAA 1034
Query: 125 VWPLSFIPSVDWAECFAVFDGLRLGVEAGV-----DDSEVGVLSSVIKEFLHSHNIHVTF 184
L I SVD AE A +GL+L E G+ D SE G + K F + ++H +F
Sbjct: 1035 TKYLENIQSVDMAEAIAAVEGLQLASEIGMHPALEDLSETGEIVLKAKNF-WTQSLHASF 1094
Query: 185 SFTRRAGNTTAHMLARRAVSSPGFQVWLEEAPLELSGALE 215
+F +R GN AHMLARRA+ F +W+E+ PLEL LE
Sbjct: 1095 NFVKREGNKAAHMLARRALLLHEFSIWMEDWPLELKSCLE 1130
BLAST of MS028270 vs. ExPASy TrEMBL
Match:
A0A6J1CDQ4 (uncharacterized protein LOC111010533 OS=Momordica charantia OX=3673 GN=LOC111010533 PE=4 SV=1)
HSP 1 Score: 95.1 bits (235), Expect = 3.9e-16
Identity = 70/229 (30.57%), Postives = 108/229 (47.16%), Query Frame = 0
Query: 1 MLDFIRGWKELIPWADLELLLVMLWSIWCARNRSISVSHAGGLLEGIRAWSDNYLSIYKQ 60
M++ +R W++++ W D E L+V LWS+W RN + + + + W Y++ +K
Sbjct: 1 MINILRDWRDMLNWKDFEELVVFLWSLWNRRNAFV-FNKRRVEDDDLAGWVSTYIATFKA 60
Query: 61 A--------QGVSLHEVDQPRQLWAGG----WNPPLNPFLKVNVDAAVSK-EEGEGVGV- 120
Q VS Q Q+ W P K+ DA+ S + G+GV
Sbjct: 61 TNTNHATANQDVS-QSFQQSSQIHQAQNHTIWCPAEEGVFKLKTDASFSSIDFNAGLGVI 120
Query: 121 ILRDSYGVVYLAAVWPLSFIPSVDWAECFAVFDGLRLGVEAGVD---------------- 180
I+RD G V +A L + SVD AE A +GLR+ +E G+
Sbjct: 121 IIRDHRGQVLASATKYLEHVASVDDAEALAAVEGLRVAMETGISPILLETDSLRIYNLFA 180
Query: 181 -DSEVGVLSSVIKEFLHSH---NIHVTFSFTRRAGNTTAHMLARRAVSS 196
D E + I E++ +H + V++SFT+R GNT AH+LARRA+ S
Sbjct: 181 RDKEGLSKTGSIIEYVKTHLATRLQVSYSFTKRTGNTIAHLLARRALQS 227
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1C225 | 2.8e-83 | 98.04 | uncharacterized protein LOC111007754 OS=Momordica charantia OX=3673 GN=LOC111007... | [more] |
A0A6J1DBJ7 | 6.2e-46 | 45.96 | uncharacterized protein LOC111018973 OS=Momordica charantia OX=3673 GN=LOC111018... | [more] |
A0A6J1C467 | 2.8e-30 | 38.70 | uncharacterized protein LOC111007775 OS=Momordica charantia OX=3673 GN=LOC111007... | [more] |
A0A6J1DAR4 | 4.0e-21 | 33.64 | uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018... | [more] |
A0A6J1CDQ4 | 3.9e-16 | 30.57 | uncharacterized protein LOC111010533 OS=Momordica charantia OX=3673 GN=LOC111010... | [more] |
Match Name | E-value | Identity | Description | |