MS028065 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGCTCGTCGATTCAAAATTAGACTCCTGCTTCGATGAAGAAGAGGCGATGGCAATGCTCAAAATTGCTTTGCTCTGCACCAATGTCTGTCCCTCAGCGAGGCCTACCATGTCCTCAGTGGTGAGCATGCTGGAAGGTAAGGCTGCTGTCCAGGAGTTGGTTTCAGATCCAAATGATATGAGAAAAGAGATGAGCGCAATGTGGACCCTTATTCAGCAGAACGAAGAAATAATCGACATCGAAAATAAGGTAGAGGCTACATTGTTTACGGACATGCCGAGTACCAAGTTCTTCGACATCGATAAAGAGTAG ATGGAGCTCGTCGATTCAAAATTAGACTCCTGCTTCGATGAAGAAGAGGCGATGGCAATGCTCAAAATTGCTTTGCTCTGCACCAATGTCTGTCCCTCAGCGAGGCCTACCATGTCCTCAGTGGTGAGCATGCTGGAAGGTAAGGCTGCTGTCCAGGAGTTGGTTTCAGATCCAAATGATATGAGAAAAGAGATGAGCGCAATGTGGACCCTTATTCAGCAGAACGAAGAAATAATCGACATCGAAAATAAGGTAGAGGCTACATTGTTTACGGACATGCCGAGTACCAAGTTCTTCGACATCGATAAAGAGTAG ATGGAGCTCGTCGATTCAAAATTAGACTCCTGCTTCGATGAAGAAGAGGCGATGGCAATGCTCAAAATTGCTTTGCTCTGCACCAATGTCTGTCCCTCAGCGAGGCCTACCATGTCCTCAGTGGTGAGCATGCTGGAAGGTAAGGCTGCTGTCCAGGAGTTGGTTTCAGATCCAAATGATATGAGAAAAGAGATGAGCGCAATGTGGACCCTTATTCAGCAGAACGAAGAAATAATCGACATCGAAAATAAGGTAGAGGCTACATTGTTTACGGACATGCCGAGTACCAAGTTCTTCGACATCGATAAAGAGTAG MELVDSKLDSCFDEEEAMAMLKIALLCTNVCPSARPTMSSVVSMLEGKAAVQELVSDPNDMRKEMSAMWTLIQQNEEIIDIENKVEATLFTDMPSTKFFDIDKE Homology
BLAST of MS028065 vs. NCBI nr
Match: XP_022134114.1 (probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840 isoform X1 [Momordica charantia]) HSP 1 Score: 150.6 bits (379), Expect = 7.5e-33 Identity = 80/96 (83.33%), Postives = 85/96 (88.54%), Query Frame = 0
BLAST of MS028065 vs. NCBI nr
Match: XP_022134132.1 (probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840 isoform X3 [Momordica charantia]) HSP 1 Score: 150.6 bits (379), Expect = 7.5e-33 Identity = 80/96 (83.33%), Postives = 85/96 (88.54%), Query Frame = 0
BLAST of MS028065 vs. NCBI nr
Match: XP_022134124.1 (probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840 isoform X2 [Momordica charantia]) HSP 1 Score: 150.6 bits (379), Expect = 7.5e-33 Identity = 80/96 (83.33%), Postives = 85/96 (88.54%), Query Frame = 0
BLAST of MS028065 vs. NCBI nr
Match: XP_022134191.1 (LOW QUALITY PROTEIN: probable LRR receptor-like serine/threonine-protein kinase At1g53420 [Momordica charantia]) HSP 1 Score: 128.6 bits (322), Expect = 3.0e-26 Identity = 68/71 (95.77%), Postives = 68/71 (95.77%), Query Frame = 0
BLAST of MS028065 vs. NCBI nr
Match: TYK27868.1 (putative leucine-rich repeat receptor-like serine/threonine-protein kinase [Cucumis melo var. makuwa]) HSP 1 Score: 126.3 bits (316), Expect = 1.5e-25 Identity = 65/96 (67.71%), Postives = 78/96 (81.25%), Query Frame = 0
BLAST of MS028065 vs. ExPASy Swiss-Prot
Match: C0LGE0 (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana OX=3702 GN=At1g07650 PE=1 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 3.1e-13 Identity = 41/78 (52.56%), Postives = 55/78 (70.51%), Query Frame = 0
BLAST of MS028065 vs. ExPASy Swiss-Prot
Match: C0LGG8 (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana OX=3702 GN=At1g53430 PE=1 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 1.6e-09 Identity = 34/52 (65.38%), Postives = 39/52 (75.00%), Query Frame = 0
BLAST of MS028065 vs. ExPASy Swiss-Prot
Match: Q9ASQ6 (Probable LRR receptor-like serine/threonine-protein kinase At1g29720 OS=Arabidopsis thaliana OX=3702 GN=RFK1 PE=2 SV=3) HSP 1 Score: 62.4 bits (150), Expect = 3.5e-09 Identity = 29/58 (50.00%), Postives = 42/58 (72.41%), Query Frame = 0
BLAST of MS028065 vs. ExPASy Swiss-Prot
Match: C0LGG9 (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana OX=3702 GN=At1g53440 PE=2 SV=2) HSP 1 Score: 62.4 bits (150), Expect = 3.5e-09 Identity = 33/52 (63.46%), Postives = 39/52 (75.00%), Query Frame = 0
BLAST of MS028065 vs. ExPASy Swiss-Prot
Match: C0LGG7 (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana OX=3702 GN=At1g53420 PE=2 SV=2) HSP 1 Score: 56.2 bits (134), Expect = 2.5e-07 Identity = 28/52 (53.85%), Postives = 39/52 (75.00%), Query Frame = 0
BLAST of MS028065 vs. ExPASy TrEMBL
Match: A0A6J1BXW4 (Non-specific serine/threonine protein kinase OS=Momordica charantia OX=3673 GN=LOC111006465 PE=4 SV=1) HSP 1 Score: 150.6 bits (379), Expect = 3.6e-33 Identity = 80/96 (83.33%), Postives = 85/96 (88.54%), Query Frame = 0
BLAST of MS028065 vs. ExPASy TrEMBL
Match: A0A6J1BXX1 (Non-specific serine/threonine protein kinase OS=Momordica charantia OX=3673 GN=LOC111006465 PE=4 SV=1) HSP 1 Score: 150.6 bits (379), Expect = 3.6e-33 Identity = 80/96 (83.33%), Postives = 85/96 (88.54%), Query Frame = 0
BLAST of MS028065 vs. ExPASy TrEMBL
Match: A0A6J1BYS5 (Non-specific serine/threonine protein kinase OS=Momordica charantia OX=3673 GN=LOC111006465 PE=4 SV=1) HSP 1 Score: 150.6 bits (379), Expect = 3.6e-33 Identity = 80/96 (83.33%), Postives = 85/96 (88.54%), Query Frame = 0
BLAST of MS028065 vs. ExPASy TrEMBL
Match: A0A6J1BX85 (LOW QUALITY PROTEIN: probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Momordica charantia OX=3673 GN=LOC111006509 PE=4 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 1.5e-26 Identity = 68/71 (95.77%), Postives = 68/71 (95.77%), Query Frame = 0
BLAST of MS028065 vs. ExPASy TrEMBL
Match: A0A5A7VHP2 (Putative leucine-rich repeat receptor-like serine/threonine-protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold271G00560 PE=4 SV=1) HSP 1 Score: 126.3 bits (316), Expect = 7.3e-26 Identity = 65/96 (67.71%), Postives = 78/96 (81.25%), Query Frame = 0
BLAST of MS028065 vs. TAIR 10
Match: AT1G07650.1 (Leucine-rich repeat transmembrane protein kinase ) HSP 1 Score: 75.9 bits (185), Expect = 2.2e-14 Identity = 41/78 (52.56%), Postives = 55/78 (70.51%), Query Frame = 0
BLAST of MS028065 vs. TAIR 10
Match: AT1G07650.2 (Leucine-rich repeat transmembrane protein kinase ) HSP 1 Score: 75.9 bits (185), Expect = 2.2e-14 Identity = 41/78 (52.56%), Postives = 55/78 (70.51%), Query Frame = 0
BLAST of MS028065 vs. TAIR 10
Match: AT1G29740.1 (Leucine-rich repeat transmembrane protein kinase ) HSP 1 Score: 63.9 bits (154), Expect = 8.6e-11 Identity = 30/64 (46.88%), Postives = 45/64 (70.31%), Query Frame = 0
BLAST of MS028065 vs. TAIR 10
Match: AT1G53430.1 (Leucine-rich repeat transmembrane protein kinase ) HSP 1 Score: 63.5 bits (153), Expect = 1.1e-10 Identity = 34/52 (65.38%), Postives = 39/52 (75.00%), Query Frame = 0
BLAST of MS028065 vs. TAIR 10
Match: AT1G53430.2 (Leucine-rich repeat transmembrane protein kinase ) HSP 1 Score: 63.5 bits (153), Expect = 1.1e-10 Identity = 34/52 (65.38%), Postives = 39/52 (75.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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