MS027542 (gene) Bitter gourd (TR) v1

Overview
NameMS027542
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionGeranylgeranyl pyrophosphate synthase
Locationscaffold313: 403522 .. 407177 (-)
RNA-Seq ExpressionMS027542
SyntenyMS027542
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCATTCAGGGCGGCCGTTCTTCGTCATGTTCGAGTTCCGATCCGATTCCTTGCCCTAGCTCACGGGGAATGCCAACCGCAACCATGTTCCGATGGATTGCTCCGGCTATTTTCATCACACGATGATCGTTTTACCAAGAAGGTCATTGAGAGAGTCATCGCGGTTATCAAGTGTCATCCCAAAGTGGATCCGTCCAAGGTGATTTGATCTTATCACTCATTTTCCCTTTCCTTTTTCCAGTTGGTTGAGTCGTTTTCATGACTTGCATTAGAAAAAAAGAACTAAAAAAGTTGAATGTTCGATCAAACAATCTAACCAAATATAAGAAGACACAATACATTGACTAAAGGAGAAAATTAACATATCGAAAGAGGAAAAAAACTCAAGTTTTGATGAAGAAAAGGTTGGGAGAAAGAGTAAGAAAAAACTCTTTATATAGTTGTAGAAAATAAAAAGTTACGAAACTTTTGAAATTCCTTATTAATTATAATTCAAAATAAATTATAACTTTTTAATTAATTCAGAGACAAAACCTTTCACATTCTAACTCTTTATATTCTAACCTTTAAGAGCGAGAGTTTATTAGAAAGAGAAGATTAATTTTAGAAAACTAAAATTTGTAAGGATGGAAATTATATATTTTAAAAGAAATGAAAAAAAAAAAAAGAAAAAGGAATGGGAGGGAGAGAGAAAAATGAGGAAAAATTGCCCTCAAAATATCTAAATGACAAAATTATCCTCAAAATATCTATGAGAATGTTGANCAAAACCTTTCACATTCTAACTCTTTATATTCTAACCTTTAAGAGCGAGAGTTTATTAGAAAGAGAAGATTAATTTTAGAAAACTAAAATTTGTAAGGATGGAAATTATATATTTTAAAAGAAAGGAAAAAAAAAAAAAGAAAATGGCATGGGAGGGAGAGAGAAAAATTAGGAAAAATTGCCCTCAAAATATCTATGGAAATGTTAAAATTAAAAGGGCAAAATAGGGAGAAAAAGTTTCTCCCTATAGCCCCTTTTAGATATACTATAGATATAGATATAGATATAGACTAGTGTAATACACCGGCATTTGACGTCTATTTTCTTCCTTGACTAGTGCCGAACTTGATCTCGTTTCTGAAATGGCTAAGTATAGAGACAATTCATCGCCTGGAAGAGGTTTAGCGAGGAACGGGACGACACTGGGATATTCTTTTAGTTGGGTGAATGCGTTTCGCATTGCTTGATCTATTCAAACGAGCCATTCTTTCTGAGTACTTGGAAAAATGGTAAATATTTGTCAGTAACTCGAGATATCAATTGGTTCAGTGCTGCAATTCTCCCGTTAAAGGCTATGCACTTGAATGCAAGGTTTTCGGGGAAGTAGTCTTATTTAGATATACTTATATTACCCACACGGTAAGTTTTTGGCTTGATAATTACCCCTTTCAGGATTTCTTTCCTTAGTCAATAGGAAATCCCTTCTTTTGTAGCTTGTTGTGGCCTTTCCAATTAATGAAGTACTCTTTTTCTAAAAAAAAAAATGTTTTCTCTTTATATATGGGACAAAGACCTATTAGGGTTTTGGCATTTATGACAGAATAATAAAATAAATGAAAAAGATAAAAAGAGGTACAAAAGGTAATTATAAATTTGTTGGTGGCAAGACCACATGAAGTTTGTTGTGGGATGGTTGGGTGCATCATATCCTTCCCATTCCAAAATATCATTACTATGTTTTCTTTTTATTATTTTAATATTAATAGTCAAATTAACACGAGCGCTAATTAGTAAATTGTTATTGAAAAGCGGACATATATATATATAACCTTTAATTACAACGAAACACTCGAGATCAAGAAGATGACATTGTCACACATCACATGTTATATGTTCCAATAAGGATAATCAAAACTTGAAAATTTGTGATATATAATATAAAGCTGCAATGTAAAAATATTCAACTTTTTAATCGTGGACATTGCAATAATAATAATTAATGGGTACACTAAATTCCAAATTTGGAACGTAAGGAATCACCAATTTTCCTCCTTTCAACTCTCAAATTTGAACCAACCAAACAAAACCCCATCACTTGCTTTGCTGCTAATTAATTTCTCCTCCAGCTCTCTTCCATGGCCATAGCTTTGGTCCGCTGCCGTCCTTTTGGTTTGATCTGTAGGAGATCAGTACTCTTCATTAAAAACAACCAAACTCAAACCCCATTTTCCCAAGCTTCTCGGAGGGAGAAGAACTTGAAGAGCACTTGTAATTTTCCGGAGTTTGGGTTCAAAGACTACTTGAGTTTGAAGGTAAAGCGAGTGAACGAGGCTTTGGATAGAACGGTGCCGTTGCAGCACTCGACGCAGATCCACGAGGCAATGAGATACTCTCTTTTGCTGCCTGGAAAGCGCTTTCGCCCGATTCTGTGCCTTGCTTCTTGTGAGCTTGTGGGTGGAGACGAAGCTCAAGCCATGCCCATGGCTTGTGCCACTGAGATGATCCAAACCATGTCATTGATGCTTGATGATCTTCCTTGCATGGACGATGACGATGTCCGGCCCGGGAGCCCCGCAAATCATAAGGTGTGTGTTCAACTACCACTAAACTCAAAGGTTTTTATTCATATTCTTAATATTCGTGTGGCCGGTTTGGCGATATCTAACAAATAAAGTATGCGTTCAACTACCACTAAACTTAAATGCTTTTATTTATATTCTTAACATTCTTGTGGCCGGTTTGGTGATCATCACAAGACCAACATAATAAGTGATTGTTGGGAGAAGTTTGAGTTTATTTGTGATCTTTTACATTCTAAAAGAGCACAGTGGCTTAAATGTTCTCTCAATGTTCTAACACCCACACTGAATATGGACCAAACTGTATCAAGACATCCTGAATCCAGTTCACGTACTGCCGACACTCTCTTATTAATTAAGCCTAAACGTCTTCGCTAGCTCACTCACACACAAGTCAAAAAGGTAGATCTAAAAGGAAAGAAGATGGTTCTGGGGAACAAACAAGAACAATAAAGTCAATGTCTTATCTCACGTAAAGTCAAAGACATCTAGAACTTTCATGCTGAAGTTTTAACCCAAGAGGGTACATTCTAATCTATACTAAATGTCATGCAAAATTCTTAATTGTCATCCTTCAGTTGCACTTATAGGTTTTAGGAAGTTTAACTAGTGCATTAAGATTGATCCACAAGGATTACATTATAGGAGTTTGAATATTACATGATCTCTTGATACCATTAAACTACTATTCTAACCAAATCAAATAAAATAGTATGTTTAAACTACTATTAAATTCAAAAGTTTTAGCTATTGAAAAATATAATCTTTCATATTTCATATTCTTATCAAGGTGTTTGGCGAAGAAACGGCCATACTAGCTGGAGACTCACTCCTTTGTCTAGCATTTCAACACATAGTCGAGAGAATCGAAAATGTTTCATCCGAACGAATTTTGAGAGCCATTATTGAGCTTGCTTCAACAACTGGGTTCGACGGGTTGCTCAGGGGGCAACTCCTGGATCTCCACTGCGAGGGGAAAGAAGTGAGTCTTGCGGAACTCGAGTACATTCACACGCTGAAAACATCAAGGCTGATCGAGGCATCGGCAGTCTGCGGGGCGATAATCGGGGAGGCGGCGAGGGGGAGATAA

mRNA sequence

ATGGCATTCAGGGCGGCCGTTCTTCGTCATGTTCGAGTTCCGATCCGATTCCTTGCCCTAGCTCACGGGGAATGCCAACCGCAACCATGTTCCGATGGATTGCTCCGGCTATTTTCATCACACGATGATCGTTTTACCAAGAAGGTCATTGAGAGAGTCATCGCGGTTATCAAGTGTCATCCCAAAGTGGATCCGTCCAAGCTCTCTTCCATGGCCATAGCTTTGGTCCGCTGCCGTCCTTTTGGTTTGATCTGTAGGAGATCAGTACTCTTCATTAAAAACAACCAAACTCAAACCCCATTTTCCCAAGCTTCTCGGAGGGAGAAGAACTTGAAGAGCACTTGTAATTTTCCGGAGTTTGGGTTCAAAGACTACTTGAGTTTGAAGGTAAAGCGAGTGAACGAGGCTTTGGATAGAACGGTGCCGTTGCAGCACTCGACGCAGATCCACGAGGCAATGAGATACTCTCTTTTGCTGCCTGGAAAGCGCTTTCGCCCGATTCTGTGCCTTGCTTCTTGTGAGCTTGTGGGTGGAGACGAAGCTCAAGCCATGCCCATGGCTTGTGCCACTGAGATGATCCAAACCATGTCATTGATGCTTGATGATCTTCCTTGCATGGACGATGACGATGTCCGGCCCGGGAGCCCCGCAAATCATAAGGTGTTTGGCGAAGAAACGGCCATACTAGCTGGAGACTCACTCCTTTGTCTAGCATTTCAACACATAGTCGAGAGAATCGAAAATGTTTCATCCGAACGAATTTTGAGAGCCATTATTGAGCTTGCTTCAACAACTGGGTTCGACGGGTTGCTCAGGGGGCAACTCCTGGATCTCCACTGCGAGGGGAAAGAAGTGAGTCTTGCGGAACTCGAGTACATTCACACGCTGAAAACATCAAGGCTGATCGAGGCATCGGCAGTCTGCGGGGCGATAATCGGGGAGGCGGCGAGGGGGAGATAA

Coding sequence (CDS)

ATGGCATTCAGGGCGGCCGTTCTTCGTCATGTTCGAGTTCCGATCCGATTCCTTGCCCTAGCTCACGGGGAATGCCAACCGCAACCATGTTCCGATGGATTGCTCCGGCTATTTTCATCACACGATGATCGTTTTACCAAGAAGGTCATTGAGAGAGTCATCGCGGTTATCAAGTGTCATCCCAAAGTGGATCCGTCCAAGCTCTCTTCCATGGCCATAGCTTTGGTCCGCTGCCGTCCTTTTGGTTTGATCTGTAGGAGATCAGTACTCTTCATTAAAAACAACCAAACTCAAACCCCATTTTCCCAAGCTTCTCGGAGGGAGAAGAACTTGAAGAGCACTTGTAATTTTCCGGAGTTTGGGTTCAAAGACTACTTGAGTTTGAAGGTAAAGCGAGTGAACGAGGCTTTGGATAGAACGGTGCCGTTGCAGCACTCGACGCAGATCCACGAGGCAATGAGATACTCTCTTTTGCTGCCTGGAAAGCGCTTTCGCCCGATTCTGTGCCTTGCTTCTTGTGAGCTTGTGGGTGGAGACGAAGCTCAAGCCATGCCCATGGCTTGTGCCACTGAGATGATCCAAACCATGTCATTGATGCTTGATGATCTTCCTTGCATGGACGATGACGATGTCCGGCCCGGGAGCCCCGCAAATCATAAGGTGTTTGGCGAAGAAACGGCCATACTAGCTGGAGACTCACTCCTTTGTCTAGCATTTCAACACATAGTCGAGAGAATCGAAAATGTTTCATCCGAACGAATTTTGAGAGCCATTATTGAGCTTGCTTCAACAACTGGGTTCGACGGGTTGCTCAGGGGGCAACTCCTGGATCTCCACTGCGAGGGGAAAGAAGTGAGTCTTGCGGAACTCGAGTACATTCACACGCTGAAAACATCAAGGCTGATCGAGGCATCGGCAGTCTGCGGGGCGATAATCGGGGAGGCGGCGAGGGGGAGATAA

Protein sequence

MAFRAAVLRHVRVPIRFLALAHGECQPQPCSDGLLRLFSSHDDRFTKKVIERVIAVIKCHPKVDPSKLSSMAIALVRCRPFGLICRRSVLFIKNNQTQTPFSQASRREKNLKSTCNFPEFGFKDYLSLKVKRVNEALDRTVPLQHSTQIHEAMRYSLLLPGKRFRPILCLASCELVGGDEAQAMPMACATEMIQTMSLMLDDLPCMDDDDVRPGSPANHKVFGEETAILAGDSLLCLAFQHIVERIENVSSERILRAIIELASTTGFDGLLRGQLLDLHCEGKEVSLAELEYIHTLKTSRLIEASAVCGAIIGEAARGR
Homology
BLAST of MS027542 vs. NCBI nr
Match: XP_021603532.1 (geranylgeranyl pyrophosphate synthase 7, chloroplastic-like [Manihot esculenta] >OAY57164.1 hypothetical protein MANES_02G076100v8 [Manihot esculenta])

HSP 1 Score: 271.6 bits (693), Expect = 8.9e-69
Identity = 128/227 (56.39%), Postives = 169/227 (74.45%), Query Frame = 0

Query: 89  VLFIKNNQTQTPFSQASRREKNLKSTCNFPEFGFKDYLSLKVKRVNEALDRTVPLQHSTQ 148
           V+ + ++    P  +A +   ++      P F F++Y++ K K VN+ALD  +PLQH  +
Sbjct: 50  VVSVSSSSLAQPLEEAQKSINDISPKIQLPAFPFQEYMATKAKHVNKALDEAIPLQHPLK 109

Query: 149 IHEAMRYSLLLPGKRFRPILCLASCELVGGDEAQAMPMACATEMIQTMSLMLDDLPCMDD 208
           IH+AMRYSLL  GKR RP+LC+A+CELVGGDEA AMP ACA EMI TMSL+ DDLPCMD+
Sbjct: 110 IHDAMRYSLLAGGKRVRPVLCIAACELVGGDEATAMPAACAMEMIHTMSLIHDDLPCMDN 169

Query: 209 DDVRPGSPANHKVFGEETAILAGDSLLCLAFQHIVERIENVSSERILRAIIELASTTGFD 268
           DD+R G P NHK+FGEETAILAGD+LL  +F+H+ +  +NVS ER++RAI EL S  G  
Sbjct: 170 DDLRRGKPTNHKMFGEETAILAGDALLSFSFEHVAKATKNVSPERVVRAIAELGSAVGAA 229

Query: 269 GLLRGQLLDLHCEGKEVSLAELEYIHTLKTSRLIEASAVCGAIIGEA 316
           GL+ GQ++D+  EGK+VSL +LEYIH  KTS+L+EA+ VCGAI+G A
Sbjct: 230 GLVAGQIVDIESEGKQVSLKDLEYIHINKTSKLLEAAVVCGAILGGA 276

BLAST of MS027542 vs. NCBI nr
Match: OMO95617.1 (Polyprenyl synthetase [Corchorus olitorius])

HSP 1 Score: 271.6 bits (693), Expect = 8.9e-69
Identity = 130/194 (67.01%), Postives = 158/194 (81.44%), Query Frame = 0

Query: 120 FGFKDYLSLKVKRVNEALDRTVPLQHSTQIHEAMRYSLLLPGKRFRPILCLASCELVGGD 179
           F F++YL +K K+VN++LD  +PLQH  +IHEAMRYSLL  GKR RPILC+ASCELVGGD
Sbjct: 58  FQFEEYLVMKAKQVNKSLDEALPLQHPVKIHEAMRYSLLAGGKRVRPILCIASCELVGGD 117

Query: 180 EAQAMPMACATEMIQTMSLMLDDLPCMDDDDVRPGSPANHKVFGEETAILAGDSLLCLAF 239
           E+ AMPMACA EMI T SL+ DDLPCMD+DD+R G P NHK FGEETA+LAGD+LLCLAF
Sbjct: 118 ESLAMPMACAVEMIHTASLIHDDLPCMDNDDLRRGMPTNHKAFGEETAVLAGDALLCLAF 177

Query: 240 QHIVERIENVSSERILRAIIELASTTGFDGLLRGQLLDLHCEGKEVSLAELEYIHTLKTS 299
           +HI  R  NVS +R++RAI EL+S  G  GL+ GQ++DL  EGKEVSL+ELEYIH  KT+
Sbjct: 178 EHIAFRTRNVSPDRVVRAIAELSSAIGSQGLVAGQIMDLESEGKEVSLSELEYIHVHKTA 237

Query: 300 RLIEASAVCGAIIG 314
           +L+EA  VCGAI+G
Sbjct: 238 KLLEACLVCGAIMG 251

BLAST of MS027542 vs. NCBI nr
Match: XP_042038450.1 (geranylgeranyl pyrophosphate synthase 7, chloroplastic-like [Salvia splendens] >KAG6387598.1 hypothetical protein SASPL_152790 [Salvia splendens])

HSP 1 Score: 271.2 bits (692), Expect = 1.2e-68
Identity = 136/219 (62.10%), Postives = 165/219 (75.34%), Query Frame = 0

Query: 95  NQTQTPFSQASRREKNLKSTCNFPEFGFKDYLSLKVKRVNEALDRTVPLQHSTQIHEAMR 154
           N T+T  S  S ++     T   P F F++Y+  K K+VN+ALD  VPLQ+  +IHEAMR
Sbjct: 38  NATKTTSSSPSPQQ-----TLASPNFKFEEYMKTKAKKVNKALDDAVPLQNPVKIHEAMR 97

Query: 155 YSLLLPGKRFRPILCLASCELVGGDEAQAMPMACATEMIQTMSLMLDDLPCMDDDDVRPG 214
           YSLL  GKR RP+LCLASCELVGGDEA A+PMACA EMI TMSL+ DDLPCMDDDD+R G
Sbjct: 98  YSLLAGGKRVRPVLCLASCELVGGDEAAAVPMACALEMIHTMSLIHDDLPCMDDDDLRRG 157

Query: 215 SPANHKVFGEETAILAGDSLLCLAFQHIVERIENVSSERILRAIIELASTTGFDGLLRGQ 274
            P +HK FGEETA+LAGD+LL LAF+H+  +  NV  ER+LRAI EL S  G +GL+ GQ
Sbjct: 158 RPTSHKAFGEETAVLAGDALLSLAFEHVAAKTTNVGHERVLRAIAELGSAVGSEGLVAGQ 217

Query: 275 LLDLHCEGKEVSLAELEYIHTLKTSRLIEASAVCGAIIG 314
           ++DL  EGKEVSL  LEYIH  KTS+L+EA+ VCGAI+G
Sbjct: 218 IVDLTSEGKEVSLDVLEYIHVHKTSKLLEAAVVCGAIVG 251

BLAST of MS027542 vs. NCBI nr
Match: XP_023890982.1 (geranylgeranyl pyrophosphate synthase, chloroplastic-like [Quercus suber])

HSP 1 Score: 271.2 bits (692), Expect = 1.2e-68
Identity = 128/196 (65.31%), Postives = 160/196 (81.63%), Query Frame = 0

Query: 118 PEFGFKDYLSLKVKRVNEALDRTVPLQHSTQIHEAMRYSLLLPGKRFRPILCLASCELVG 177
           P F F++Y++LK K VN+AL+  VPLQH  +IHEAMRYSLL  GKR RPILC+ASCELVG
Sbjct: 70  PIFQFEEYMALKTKTVNKALEEAVPLQHPLKIHEAMRYSLLAGGKRIRPILCIASCELVG 129

Query: 178 GDEAQAMPMACATEMIQTMSLMLDDLPCMDDDDVRPGSPANHKVFGEETAILAGDSLLCL 237
           GDE+  +P++CA EMI TMSL+ DDLPCMD+DD+R G P NHK FGEETA+LAGD+LL L
Sbjct: 130 GDESLTLPISCAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKAFGEETAVLAGDALLSL 189

Query: 238 AFQHIVERIENVSSERILRAIIELASTTGFDGLLRGQLLDLHCEGKEVSLAELEYIHTLK 297
           AFQHI  +   VSS+R+++AI EL S  G +GL+ GQ++DL CEGK+VSL+ELEYIH  K
Sbjct: 190 AFQHIAAKAAKVSSDRVIQAIAELGSAVGSEGLVAGQVVDLCCEGKQVSLSELEYIHVHK 249

Query: 298 TSRLIEASAVCGAIIG 314
           T++L+EASAVCG I+G
Sbjct: 250 TAKLLEASAVCGVIVG 265

BLAST of MS027542 vs. NCBI nr
Match: OMP05123.1 (Polyprenyl synthetase [Corchorus olitorius])

HSP 1 Score: 270.8 bits (691), Expect = 1.5e-68
Identity = 134/220 (60.91%), Postives = 168/220 (76.36%), Query Frame = 0

Query: 100 PFSQASRREKNLKSTCN-FPEFGFKDYLSLKVKRVNEALDRTVPLQHSTQIHEAMRYSLL 159
           P  QA   +  + S  +    F F+DY++ K K+VN+AL + +PL+H  +IHEAMRYSLL
Sbjct: 56  PVGQAPMAKDRIMSVSDPLSVFNFEDYMADKGKQVNQALIKAIPLKHPIEIHEAMRYSLL 115

Query: 160 LPGKRFRPILCLASCELVGGDEAQAMPMACATEMIQTMSLMLDDLPCMDDDDVRPGSPAN 219
             GKR RPILC+ASCELVGGDE  AMPMACA EMI TMSL+ DDLPCMD+DD+R G P N
Sbjct: 116 AGGKRVRPILCIASCELVGGDETVAMPMACAMEMIHTMSLIHDDLPCMDNDDLRRGKPTN 175

Query: 220 HKVFGEETAILAGDSLLCLAFQHIVERIENVSSERILRAIIELASTTGFDGLLRGQLLDL 279
           HKVFGEETAILAGD+LL LAF+H+ +   NVS++R++RAI EL S  G +GL+ GQ++D+
Sbjct: 176 HKVFGEETAILAGDALLSLAFEHVAKNTNNVSADRVVRAIAELGSAVGSEGLVAGQIVDI 235

Query: 280 HCEGKEVSLAELEYIHTLKTSRLIEASAVCGAIIGEAARG 319
             EGKEVSL ELE+IH  KT++L+EAS VCGAI+G A  G
Sbjct: 236 QSEGKEVSLKELEFIHLHKTAKLLEASVVCGAIVGGANDG 275

BLAST of MS027542 vs. ExPASy Swiss-Prot
Match: Q94ID7 (Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Hevea brasiliensis OX=3981 GN=GGPS PE=1 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 1.8e-59
Identity = 119/225 (52.89%), Postives = 158/225 (70.22%), Query Frame = 0

Query: 96  QTQTPFSQAS----RREKNLKSTCNF--PEFGFKDYLSLKVKRVNEALDRTVPLQHSTQI 155
           +++ P S  S    + E+ L+   N   P F FK Y+  K   +N+AL+  +PLQ   +I
Sbjct: 47  KSERPISSVSAIITKEEETLQEEQNNPPPSFDFKSYMLQKGNSINQALEAAIPLQEPAKI 106

Query: 156 HEAMRYSLLLPGKRFRPILCLASCELVGGDEAQAMPMACATEMIQTMSLMLDDLPCMDDD 215
           HE+MRYSLL  GKR RP LCLA+CELVGG+++ AMP ACA EMI TMSL+ DDLPCMD+D
Sbjct: 107 HESMRYSLLAGGKRVRPALCLAACELVGGNDSMAMPAACAVEMIHTMSLIHDDLPCMDND 166

Query: 216 DVRPGSPANHKVFGEETAILAGDSLLCLAFQHIVERIENVSSERILRAIIELASTTGFDG 275
           D+R G P NH VFGE+ A+LAGD+LL  AF+HI     NVSS RI+RA+ ELA   G +G
Sbjct: 167 DLRRGKPTNHIVFGEDVAVLAGDALLAFAFEHIAVSTLNVSSARIVRAVGELAKAIGAEG 226

Query: 276 LLRGQLLDLHCEG-KEVSLAELEYIHTLKTSRLIEASAVCGAIIG 314
           L+ GQ++D++ EG  EV L +LE+IH  KT++L+E + V GAI+G
Sbjct: 227 LVAGQVVDINSEGSSEVDLEKLEFIHIHKTAKLLEGAVVLGAILG 271

BLAST of MS027542 vs. ExPASy Swiss-Prot
Match: P34802 (Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GGPPS1 PE=1 SV=2)

HSP 1 Score: 229.9 bits (585), Expect = 3.9e-59
Identity = 124/259 (47.88%), Postives = 168/259 (64.86%), Query Frame = 0

Query: 60  HPKVDPSKLSSMAIALVRCRPFGLICRRSVLFIKNNQTQTPFSQASRREKNLKSTCNFPE 119
           HP    +K  S +  +   +P     +R+V    ++ +    S    +E NL+ +     
Sbjct: 19  HPSSILTKSRSRSCPITLTKPISFRSKRTV----SSSSSIVSSSVVTKEDNLRQS-EPSS 78

Query: 120 FGFKDYLSLKVKRVNEALDRTVPLQHSTQIHEAMRYSLLLPGKRFRPILCLASCELVGGD 179
           F F  Y+  K + VN+ALD  VPL+   +IHEAMRYSLL  GKR RP+LC+A+CELVGG+
Sbjct: 79  FDFMSYIITKAELVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGE 138

Query: 180 EAQAMPMACATEMIQTMSLMLDDLPCMDDDDVRPGSPANHKVFGEETAILAGDSLLCLAF 239
           E+ AMP ACA EMI TMSL+ DDLPCMD+DD+R G P NHKVFGE+ A+LAGD+LL  AF
Sbjct: 139 ESTAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFAF 198

Query: 240 QHIVERIEN--VSSERILRAIIELASTTGFDGLLRGQLLDLHCEG---KEVSLAELEYIH 299
           +H+     +  VS  R++RA+ ELA   G +GL+ GQ++D+  EG    +V L  LE+IH
Sbjct: 199 EHLASATSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNDVGLEHLEFIH 258

Query: 300 TLKTSRLIEASAVCGAIIG 314
             KT+ L+EASAV GAI+G
Sbjct: 259 LHKTAALLEASAVLGAIVG 272

BLAST of MS027542 vs. ExPASy Swiss-Prot
Match: Q42698 (Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Catharanthus roseus OX=4058 GN=GGPS1 PE=3 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 5.1e-59
Identity = 127/259 (49.03%), Postives = 166/259 (64.09%), Query Frame = 0

Query: 59  CHPKVDPSKLSSMAIALVRCRPFGLICRRSV-LFIKNNQTQTPFSQASRREKNLKSTCNF 118
           CHP  +   +S      +R +P     R S+   I   QTQ      S++E    S+ + 
Sbjct: 6   CHPLKNQLPISFFLSGTIR-KPIFSCSRLSISAIITKEQTQEESESKSKKEVAFSSSSS- 65

Query: 119 PEFGFKDYLSLKVKRVNEALDRTVPLQHSTQIHEAMRYSLLLPGKRFRPILCLASCELVG 178
             F FK Y+  K   VN+AL+  V ++   +IHE+MRYSLL  GKR RP+LC+A+CEL G
Sbjct: 66  --FDFKAYMIGKANSVNKALEDAVLVREPLKIHESMRYSLLAGGKRVRPMLCIAACELFG 125

Query: 179 GDEAQAMPMACATEMIQTMSLMLDDLPCMDDDDVRPGSPANHKVFGEETAILAGDSLLCL 238
           G E+ AMP ACA EMI TMSLM DDLPCMD+DD+R G P NHKVFGE+ A+LAGD+LL  
Sbjct: 126 GTESVAMPSACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAF 185

Query: 239 AFQHIVERIENVSSERILRAIIELASTTGFDGLLRGQLLDLHCEG-KEVSLAELEYIHTL 298
           AF+HI    + VSSERI+R + ELA   G +GL+ GQ++D+  EG  +V L  LE+IH  
Sbjct: 186 AFEHIATATKGVSSERIVRVVGELAKCIGSEGLVAGQVVDVCSEGIADVGLEHLEFIHIH 245

Query: 299 KTSRLIEASAVCGAIIGEA 316
           KT+ L+E S V GAI+G A
Sbjct: 246 KTAALLEGSVVLGAIVGGA 260

BLAST of MS027542 vs. ExPASy Swiss-Prot
Match: Q43133 (Geranylgeranyl pyrophosphate synthase, chloroplastic/chromoplastic OS=Sinapis alba OX=3728 GN=GGPS1 PE=1 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 7.4e-58
Identity = 120/244 (49.18%), Postives = 163/244 (66.80%), Query Frame = 0

Query: 74  ALVRCRPFGLICRRSVLFIKNNQTQTPFSQASRREKNLKSTCNFPEFGFKDYLSLKVKRV 133
           +L+  +P  L  +R+V       + +  S  ++ + NLKS+ +   F F  Y+  K   V
Sbjct: 32  SLITLKPISLTPKRTV------SSSSSSSLITKEDNNLKSSSS--SFDFMSYIIRKADSV 91

Query: 134 NEALDRTVPLQHSTQIHEAMRYSLLLPGKRFRPILCLASCELVGGDEAQAMPMACATEMI 193
           N+ALD  VPL+   +IHEAMRYSLL  GKR RP+LC+A+CELVGG+E+ AMP  CA EMI
Sbjct: 92  NKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESLAMPARCAVEMI 151

Query: 194 QTMSLMLDDLPCMDDDDVRPGSPANHKVFGEETAILAGDSLLCLAFQHIVERIEN-VSSE 253
            TMSL+ DDLPCMD+DD+R G P NHKV+GE+ A+LAGD+LL  AF+H+     + VS  
Sbjct: 152 HTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLAGDALLSFAFEHLASATSSEVSPA 211

Query: 254 RILRAIIELASTTGFDGLLRGQLLDLHCEG---KEVSLAELEYIHTLKTSRLIEASAVCG 313
           R++RA+ ELA   G +GL+ GQ++D+  EG     V L  L++IH  KT+ L+EASAV G
Sbjct: 212 RVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNNVGLEHLKFIHLHKTAALLEASAVLG 267

BLAST of MS027542 vs. ExPASy Swiss-Prot
Match: P80042 (Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Capsicum annuum OX=4072 GN=GGPS1 PE=3 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 9.0e-56
Identity = 109/210 (51.90%), Postives = 147/210 (70.00%), Query Frame = 0

Query: 105 SRREKNLKSTCNFPEFGFKDYLSLKVKRVNEALDRTVPLQHSTQIHEAMRYSLLLPGKRF 164
           ++ ++ +++      F FK Y++ K   VN+ALD  + ++    IHEAMRYSLL  GKR 
Sbjct: 61  TKEDERIEAAQTEEPFNFKIYVTEKAISVNKALDEAIIVKEPHVIHEAMRYSLLAGGKRV 120

Query: 165 RPILCLASCELVGGDEAQAMPMACATEMIQTMSLMLDDLPCMDDDDVRPGSPANHKVFGE 224
           RP+LCLA+CELVGG++  AM  ACA EMI TMSL+ DDLPCMD+DD+R G P NHK++GE
Sbjct: 121 RPMLCLAACELVGGNQENAMAAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKIYGE 180

Query: 225 ETAILAGDSLLCLAFQHIVERIENVSSERILRAIIELASTTGFDGLLRGQLLDLHCEGK- 284
           + A+LAGDSLL  AF+HIV     V+  RI+ A+ ELA + G +GL+ GQ+ D+ C G  
Sbjct: 181 DVAVLAGDSLLAFAFEHIVNSTAGVTPSRIVGAVAELAKSIGTEGLVAGQVADIKCTGNA 240

Query: 285 EVSLAELEYIHTLKTSRLIEASAVCGAIIG 314
            VSL  LE+IH  KT+ L+E+S V GAI+G
Sbjct: 241 SVSLETLEFIHVHKTAALLESSVVLGAILG 270

BLAST of MS027542 vs. ExPASy TrEMBL
Match: A0A1R3JLJ6 (Polyprenyl synthetase OS=Corchorus olitorius OX=93759 GN=COLO4_15753 PE=3 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 4.3e-69
Identity = 130/194 (67.01%), Postives = 158/194 (81.44%), Query Frame = 0

Query: 120 FGFKDYLSLKVKRVNEALDRTVPLQHSTQIHEAMRYSLLLPGKRFRPILCLASCELVGGD 179
           F F++YL +K K+VN++LD  +PLQH  +IHEAMRYSLL  GKR RPILC+ASCELVGGD
Sbjct: 58  FQFEEYLVMKAKQVNKSLDEALPLQHPVKIHEAMRYSLLAGGKRVRPILCIASCELVGGD 117

Query: 180 EAQAMPMACATEMIQTMSLMLDDLPCMDDDDVRPGSPANHKVFGEETAILAGDSLLCLAF 239
           E+ AMPMACA EMI T SL+ DDLPCMD+DD+R G P NHK FGEETA+LAGD+LLCLAF
Sbjct: 118 ESLAMPMACAVEMIHTASLIHDDLPCMDNDDLRRGMPTNHKAFGEETAVLAGDALLCLAF 177

Query: 240 QHIVERIENVSSERILRAIIELASTTGFDGLLRGQLLDLHCEGKEVSLAELEYIHTLKTS 299
           +HI  R  NVS +R++RAI EL+S  G  GL+ GQ++DL  EGKEVSL+ELEYIH  KT+
Sbjct: 178 EHIAFRTRNVSPDRVVRAIAELSSAIGSQGLVAGQIMDLESEGKEVSLSELEYIHVHKTA 237

Query: 300 RLIEASAVCGAIIG 314
           +L+EA  VCGAI+G
Sbjct: 238 KLLEACLVCGAIMG 251

BLAST of MS027542 vs. ExPASy TrEMBL
Match: A0A2C9WC84 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_02G076100 PE=3 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 4.3e-69
Identity = 128/227 (56.39%), Postives = 169/227 (74.45%), Query Frame = 0

Query: 89  VLFIKNNQTQTPFSQASRREKNLKSTCNFPEFGFKDYLSLKVKRVNEALDRTVPLQHSTQ 148
           V+ + ++    P  +A +   ++      P F F++Y++ K K VN+ALD  +PLQH  +
Sbjct: 50  VVSVSSSSLAQPLEEAQKSINDISPKIQLPAFPFQEYMATKAKHVNKALDEAIPLQHPLK 109

Query: 149 IHEAMRYSLLLPGKRFRPILCLASCELVGGDEAQAMPMACATEMIQTMSLMLDDLPCMDD 208
           IH+AMRYSLL  GKR RP+LC+A+CELVGGDEA AMP ACA EMI TMSL+ DDLPCMD+
Sbjct: 110 IHDAMRYSLLAGGKRVRPVLCIAACELVGGDEATAMPAACAMEMIHTMSLIHDDLPCMDN 169

Query: 209 DDVRPGSPANHKVFGEETAILAGDSLLCLAFQHIVERIENVSSERILRAIIELASTTGFD 268
           DD+R G P NHK+FGEETAILAGD+LL  +F+H+ +  +NVS ER++RAI EL S  G  
Sbjct: 170 DDLRRGKPTNHKMFGEETAILAGDALLSFSFEHVAKATKNVSPERVVRAIAELGSAVGAA 229

Query: 269 GLLRGQLLDLHCEGKEVSLAELEYIHTLKTSRLIEASAVCGAIIGEA 316
           GL+ GQ++D+  EGK+VSL +LEYIH  KTS+L+EA+ VCGAI+G A
Sbjct: 230 GLVAGQIVDIESEGKQVSLKDLEYIHINKTSKLLEAAVVCGAILGGA 276

BLAST of MS027542 vs. ExPASy TrEMBL
Match: A0A4D8ZW25 (Geranylgeranyl diphosphate synthase, type II OS=Salvia splendens OX=180675 GN=GGPS PE=3 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 5.6e-69
Identity = 136/219 (62.10%), Postives = 165/219 (75.34%), Query Frame = 0

Query: 95  NQTQTPFSQASRREKNLKSTCNFPEFGFKDYLSLKVKRVNEALDRTVPLQHSTQIHEAMR 154
           N T+T  S  S ++     T   P F F++Y+  K K+VN+ALD  VPLQ+  +IHEAMR
Sbjct: 38  NATKTTSSSPSPQQ-----TLASPNFKFEEYMKTKAKKVNKALDDAVPLQNPVKIHEAMR 97

Query: 155 YSLLLPGKRFRPILCLASCELVGGDEAQAMPMACATEMIQTMSLMLDDLPCMDDDDVRPG 214
           YSLL  GKR RP+LCLASCELVGGDEA A+PMACA EMI TMSL+ DDLPCMDDDD+R G
Sbjct: 98  YSLLAGGKRVRPVLCLASCELVGGDEAAAVPMACALEMIHTMSLIHDDLPCMDDDDLRRG 157

Query: 215 SPANHKVFGEETAILAGDSLLCLAFQHIVERIENVSSERILRAIIELASTTGFDGLLRGQ 274
            P +HK FGEETA+LAGD+LL LAF+H+  +  NV  ER+LRAI EL S  G +GL+ GQ
Sbjct: 158 RPTSHKAFGEETAVLAGDALLSLAFEHVAAKTTNVGHERVLRAIAELGSAVGSEGLVAGQ 217

Query: 275 LLDLHCEGKEVSLAELEYIHTLKTSRLIEASAVCGAIIG 314
           ++DL  EGKEVSL  LEYIH  KTS+L+EA+ VCGAI+G
Sbjct: 218 IVDLTSEGKEVSLDVLEYIHVHKTSKLLEAAVVCGAIVG 251

BLAST of MS027542 vs. ExPASy TrEMBL
Match: A0A1R3KDG3 (Polyprenyl synthetase OS=Corchorus olitorius OX=93759 GN=COLO4_09040 PE=3 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 7.4e-69
Identity = 134/220 (60.91%), Postives = 168/220 (76.36%), Query Frame = 0

Query: 100 PFSQASRREKNLKSTCN-FPEFGFKDYLSLKVKRVNEALDRTVPLQHSTQIHEAMRYSLL 159
           P  QA   +  + S  +    F F+DY++ K K+VN+AL + +PL+H  +IHEAMRYSLL
Sbjct: 56  PVGQAPMAKDRIMSVSDPLSVFNFEDYMADKGKQVNQALIKAIPLKHPIEIHEAMRYSLL 115

Query: 160 LPGKRFRPILCLASCELVGGDEAQAMPMACATEMIQTMSLMLDDLPCMDDDDVRPGSPAN 219
             GKR RPILC+ASCELVGGDE  AMPMACA EMI TMSL+ DDLPCMD+DD+R G P N
Sbjct: 116 AGGKRVRPILCIASCELVGGDETVAMPMACAMEMIHTMSLIHDDLPCMDNDDLRRGKPTN 175

Query: 220 HKVFGEETAILAGDSLLCLAFQHIVERIENVSSERILRAIIELASTTGFDGLLRGQLLDL 279
           HKVFGEETAILAGD+LL LAF+H+ +   NVS++R++RAI EL S  G +GL+ GQ++D+
Sbjct: 176 HKVFGEETAILAGDALLSLAFEHVAKNTNNVSADRVVRAIAELGSAVGSEGLVAGQIVDI 235

Query: 280 HCEGKEVSLAELEYIHTLKTSRLIEASAVCGAIIGEAARG 319
             EGKEVSL ELE+IH  KT++L+EAS VCGAI+G A  G
Sbjct: 236 QSEGKEVSLKELEFIHLHKTAKLLEASVVCGAIVGGANDG 275

BLAST of MS027542 vs. ExPASy TrEMBL
Match: A0A5J5BXS7 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_004148 PE=3 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 7.4e-69
Identity = 137/233 (58.80%), Postives = 174/233 (74.68%), Query Frame = 0

Query: 82  GLICRRSVLFIKN-NQTQTPFSQASRREKNLKSTCNFPEFGFKDYLSLKVKRVNEALDRT 141
           G +  R+   +KN + T  P S  ++  + L+   N P F F++Y++ K KRVN ALD  
Sbjct: 62  GKLLNRTGTLLKNASATHVPHSSLAQTIQ-LEQLTNKPLFQFEEYMTTKAKRVNRALDEA 121

Query: 142 VPLQHSTQIHEAMRYSLLLPGKRFRPILCLASCELVGGDEAQAMPMACATEMIQTMSLML 201
           VP+Q    IHEAMRYSLL  GKR RPILC+ASCELVGGDE+ A+P+ACA EMI TMSL+ 
Sbjct: 122 VPMQQPVTIHEAMRYSLLAGGKRVRPILCIASCELVGGDESTAIPVACAVEMIHTMSLIH 181

Query: 202 DDLPCMDDDDVRPGSPANHKVFGEETAILAGDSLLCLAFQHIVERIENVSSERILRAIIE 261
           DDLPCMD+DD+R G P NHKVFGEETA+LAGD+LL LAFQHI  R  +VS++R++RAI E
Sbjct: 182 DDLPCMDNDDLRRGKPTNHKVFGEETAVLAGDALLSLAFQHIAGRTMDVSADRVVRAIAE 241

Query: 262 LASTTGFDGLLRGQLLDLHCEGKEVSLAELEYIHTLKTSRLIEASAVCGAIIG 314
           L S  G +GL+ GQ++DL   GK+V+L ELEYIH  KTS+L+EA+ VCGAI+G
Sbjct: 242 LGSAVGSEGLVAGQIVDLSSAGKQVNLRELEYIHVHKTSKLLEAAVVCGAIMG 293

BLAST of MS027542 vs. TAIR 10
Match: AT4G36810.1 (geranylgeranyl pyrophosphate synthase 1 )

HSP 1 Score: 229.9 bits (585), Expect = 2.8e-60
Identity = 124/259 (47.88%), Postives = 168/259 (64.86%), Query Frame = 0

Query: 60  HPKVDPSKLSSMAIALVRCRPFGLICRRSVLFIKNNQTQTPFSQASRREKNLKSTCNFPE 119
           HP    +K  S +  +   +P     +R+V    ++ +    S    +E NL+ +     
Sbjct: 19  HPSSILTKSRSRSCPITLTKPISFRSKRTV----SSSSSIVSSSVVTKEDNLRQS-EPSS 78

Query: 120 FGFKDYLSLKVKRVNEALDRTVPLQHSTQIHEAMRYSLLLPGKRFRPILCLASCELVGGD 179
           F F  Y+  K + VN+ALD  VPL+   +IHEAMRYSLL  GKR RP+LC+A+CELVGG+
Sbjct: 79  FDFMSYIITKAELVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGE 138

Query: 180 EAQAMPMACATEMIQTMSLMLDDLPCMDDDDVRPGSPANHKVFGEETAILAGDSLLCLAF 239
           E+ AMP ACA EMI TMSL+ DDLPCMD+DD+R G P NHKVFGE+ A+LAGD+LL  AF
Sbjct: 139 ESTAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFAF 198

Query: 240 QHIVERIEN--VSSERILRAIIELASTTGFDGLLRGQLLDLHCEG---KEVSLAELEYIH 299
           +H+     +  VS  R++RA+ ELA   G +GL+ GQ++D+  EG    +V L  LE+IH
Sbjct: 199 EHLASATSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNDVGLEHLEFIH 258

Query: 300 TLKTSRLIEASAVCGAIIG 314
             KT+ L+EASAV GAI+G
Sbjct: 259 LHKTAALLEASAVLGAIVG 272

BLAST of MS027542 vs. TAIR 10
Match: AT2G18640.1 (geranylgeranyl pyrophosphate synthase 4 )

HSP 1 Score: 216.9 bits (551), Expect = 2.4e-56
Identity = 112/197 (56.85%), Postives = 140/197 (71.07%), Query Frame = 0

Query: 120 FGFKDYLSLKVKRVNEALDRTVPLQHSTQIHEAMRYSLLLPGKRFRPILCLASCELVGGD 179
           F FK Y+  K + +N ALD  +PL     IH+AMRY++L  GKR RPILCLA+CELVGG+
Sbjct: 79  FDFKPYMISKAETINRALDEAIPLIEPLNIHKAMRYAILAGGKRVRPILCLAACELVGGE 138

Query: 180 EAQAMPMACATEMIQTMSLMLDDLPCMDDDDVRPGSPANHKVFGEETAILAGDSLLCLAF 239
           E  A+  ACA EMI TMSL+ DDLPCMD+DD+R G P  HKVFGE  AIL+G +LL LAF
Sbjct: 139 ERLAIQAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGESVAILSGGALLALAF 198

Query: 240 QHIVERIENVSSERILRAIIELASTTGFDGLLRGQLLDLHCEGKE---VSLAELEYIHTL 299
           +H+ E   +VSS++++RA+ ELA + G  GL+ GQ  DL  EG E   V L +LEYIH  
Sbjct: 199 EHLTE--ADVSSKKMVRAVKELAKSIGTKGLVAGQAKDLSSEGLEQNDVGLEDLEYIHVH 258

Query: 300 KTSRLIEASAVCGAIIG 314
           KT  L+EASAV GA+IG
Sbjct: 259 KTGSLLEASAVIGAVIG 273

BLAST of MS027542 vs. TAIR 10
Match: AT2G23800.1 (geranylgeranyl pyrophosphate synthase 2 )

HSP 1 Score: 211.5 bits (537), Expect = 1.0e-54
Identity = 113/209 (54.07%), Postives = 143/209 (68.42%), Query Frame = 0

Query: 108 EKNLKSTCNFPEFGFKDYLSLKVKRVNEALDRTVPLQHSTQIHEAMRYSLLLPGKRFRPI 167
           E  + S  NF  F F  Y+  K + VN+AL+  +P+    +IHEAMRY++L  GKR RPI
Sbjct: 72  EGGIVSNANF-TFEFDPYMMSKAESVNKALEEAIPVGEPLKIHEAMRYAILAAGKRVRPI 131

Query: 168 LCLASCELVGGDEAQAMPMACATEMIQTMSLMLDDLPCMDDDDVRPGSPANHKVFGEETA 227
           LCLASCELVGG E  AMP ACA EMI TMSL+ DDLPCMD+DD+R G P  HKV+GE  A
Sbjct: 132 LCLASCELVGGQENAAMPAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVYGEGVA 191

Query: 228 ILAGDSLLCLAFQHIVERIENVSSERILRAIIELASTTGFDGLLRGQLLDLHCEG---KE 287
           IL+G +LL LAF+H+      +SSER++ A+ ELA + G  GL+ GQ +D+  EG    E
Sbjct: 192 ILSGGALLSLAFEHMT--TAEISSERMVWAVRELARSIGTRGLVAGQAMDISSEGLDLNE 251

Query: 288 VSLAELEYIHTLKTSRLIEASAVCGAIIG 314
           V L  LE+IH  KT+ L+E +AV GAIIG
Sbjct: 252 VGLEHLEFIHVHKTAVLLETAAVLGAIIG 277

BLAST of MS027542 vs. TAIR 10
Match: AT2G18620.1 (Terpenoid synthases superfamily protein )

HSP 1 Score: 211.1 bits (536), Expect = 1.3e-54
Identity = 114/226 (50.44%), Postives = 149/226 (65.93%), Query Frame = 0

Query: 91  FIKNNQTQTPFSQASRREKNLKSTCNFPEFGFKDYLSLKVKRVNEALDRTVPLQHSTQIH 150
           F+   +  T  S  +R E  + +      F F  Y+  K   VNEALD  V L+   +IH
Sbjct: 29  FLLRRKLSTVLSVTARDEGIIHN-----HFDFTSYMIGKANAVNEALDSAVSLREPIKIH 88

Query: 151 EAMRYSLLLPGKRFRPILCLASCELVGGDEAQAMPMACATEMIQTMSLMLDDLPCMDDDD 210
           EA+RYSLL  GKR RP+LC+A+CELVGG+E+ A+P ACA EMI TMSL+ DDLPCMD+DD
Sbjct: 89  EAIRYSLLARGKRVRPVLCIAACELVGGEESVALPAACAVEMIHTMSLIHDDLPCMDNDD 148

Query: 211 VRPGSPANHKVFGEETAILAGDSLLCLAFQHIVERIENVSSERILRAIIELASTTGFDGL 270
           +R G P NHKVFGE+ A+LAGD+L+  AF+H+      VS  R++RAI ELA   G  GL
Sbjct: 149 LRRGKPTNHKVFGEDVAVLAGDALISFAFEHLATSTA-VSPARVVRAIGELAKAIGSKGL 208

Query: 271 LRGQLLDLHCEG---KEVSLAELEYIHTLKTSRLIEASAVCGAIIG 314
           + GQ++DL   G    +V L  LE+IH  KT+ L+EA+ V GAI+G
Sbjct: 209 VAGQVVDLTSGGMDQNDVGLEVLEFIHVHKTAVLLEAATVLGAIVG 248

BLAST of MS027542 vs. TAIR 10
Match: AT3G29430.1 (Terpenoid synthases superfamily protein )

HSP 1 Score: 209.1 bits (531), Expect = 5.1e-54
Identity = 113/207 (54.59%), Postives = 144/207 (69.57%), Query Frame = 0

Query: 112 KSTCNFPEFGFKDYLSLKVKRVNEALDRTVPLQHSTQIHEAMRYSLLLPGKRFRPILCLA 171
           KS      F FK Y+  K + V+ AL+ +VPLQ    I EA+RYSLL  GKR RP+LC+A
Sbjct: 53  KSNDRNSAFDFKSYMIRKAESVSAALNVSVPLQEPLTIQEAVRYSLLAGGKRVRPLLCIA 112

Query: 172 SCELVGGDEAQAMPMACATEMIQTMSLMLDDLPCMDDDDVRPGSPANHKVFGEETAILAG 231
           +CELVGGDEA AM  ACA EMI T SL+ DDLPCMDD D+R G P NHK FGE+ A+LAG
Sbjct: 113 ACELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDDADLRRGKPTNHKEFGEDMAVLAG 172

Query: 232 DSLLCLAFQHIVERIEN--VSSERILRAIIELASTTGFDGLLRGQLLDLHCEG---KEVS 291
           D+LL LAF+H+   + N  V+ ER++RA++ELA   G  GL+ GQ+ DL  +G    +V 
Sbjct: 173 DALLALAFEHMT-FVSNGLVAPERMIRAVMELAKAIGTKGLVAGQVTDLCSQGLNPDDVG 232

Query: 292 LAELEYIHTLKTSRLIEASAVCGAIIG 314
           L  LE+IH  KT+ L+EA+AV GAI+G
Sbjct: 233 LERLEFIHLHKTAALLEAAAVLGAIMG 258

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_021603532.18.9e-6956.39geranylgeranyl pyrophosphate synthase 7, chloroplastic-like [Manihot esculenta] ... [more]
OMO95617.18.9e-6967.01Polyprenyl synthetase [Corchorus olitorius][more]
XP_042038450.11.2e-6862.10geranylgeranyl pyrophosphate synthase 7, chloroplastic-like [Salvia splendens] >... [more]
XP_023890982.11.2e-6865.31geranylgeranyl pyrophosphate synthase, chloroplastic-like [Quercus suber][more]
OMP05123.11.5e-6860.91Polyprenyl synthetase [Corchorus olitorius][more]
Match NameE-valueIdentityDescription
Q94ID71.8e-5952.89Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Hevea brasiliensis OX=39... [more]
P348023.9e-5947.88Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplast... [more]
Q426985.1e-5949.03Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Catharanthus roseus OX=4... [more]
Q431337.4e-5849.18Geranylgeranyl pyrophosphate synthase, chloroplastic/chromoplastic OS=Sinapis al... [more]
P800429.0e-5651.90Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Capsicum annuum OX=4072 ... [more]
Match NameE-valueIdentityDescription
A0A1R3JLJ64.3e-6967.01Polyprenyl synthetase OS=Corchorus olitorius OX=93759 GN=COLO4_15753 PE=3 SV=1[more]
A0A2C9WC844.3e-6956.39Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_02G076100 PE=3 SV=... [more]
A0A4D8ZW255.6e-6962.10Geranylgeranyl diphosphate synthase, type II OS=Salvia splendens OX=180675 GN=GG... [more]
A0A1R3KDG37.4e-6960.91Polyprenyl synthetase OS=Corchorus olitorius OX=93759 GN=COLO4_09040 PE=3 SV=1[more]
A0A5J5BXS77.4e-6958.80Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_004148 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT4G36810.12.8e-6047.88geranylgeranyl pyrophosphate synthase 1 [more]
AT2G18640.12.4e-5656.85geranylgeranyl pyrophosphate synthase 4 [more]
AT2G23800.11.0e-5454.07geranylgeranyl pyrophosphate synthase 2 [more]
AT2G18620.11.3e-5450.44Terpenoid synthases superfamily protein [more]
AT3G29430.15.1e-5454.59Terpenoid synthases superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000092Polyprenyl synthetasePFAMPF00348polyprenyl_syntcoord: 148..315
e-value: 4.6E-31
score: 107.8
IPR008949Isoprenoid synthase domain superfamilyGENE3D1.10.600.10Farnesyl Diphosphate Synthasecoord: 123..318
e-value: 3.0E-68
score: 231.9
IPR008949Isoprenoid synthase domain superfamilySUPERFAMILY48576Terpenoid synthasescoord: 121..316
NoneNo IPR availablePANTHERPTHR43281FARNESYL DIPHOSPHATE SYNTHASEcoord: 101..316

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS027542.1MS027542.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008299 isoprenoid biosynthetic process