MS027539 (gene) Bitter gourd (TR) v1

Overview
NameMS027539
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPentatricopeptide repeat-containing protein
Locationscaffold313: 367248 .. 368795 (-)
RNA-Seq ExpressionMS027539
SyntenyMS027539
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAGAGAACAACAAACGGCGACTCTCCGACCACCACCCCCAACGGAGCAAGAAGCATCCACCTTCATCTTCTCCTTCTTCCGCTCCAAGTCCTCTTCCCTCAAGCTCAGTTTCTCAACAACAGTTCCACGGCCCCTCACCGGAACGCCAAAGGAACAAGATCCCACATTTCGTTTCCTACCTTGAGTTCCCCAATTTGCCGTTTAAGGTCAAATTACTGTGTGAAATCATCGCCAATTCCCCATCCATCGACGTCGAGAGGATTCTCGAAGACACCGGCGTTCAGGTCACTCAAGAAGATGTCGAGGAGGTCCTTAAATTGTCTTACAAGTTTCCAGGATCCTCTGTTAAATTTTTCCGCTGGTCCGGCCGGAAGCTCAACGACCAACACAGCCCCTATGCTTGGAATTTGATCATCGACATGTTGGGTAAGAATTTATATTTCGAACCAATGTGGGATGCTATGAAATCGATGAAGAAAGAAGGGTTGCTCTCTTTGGCGACTTTTGCTTCGGTATTTAGTAGTTATATCGTTGCAAACTGTGTTAAGGACGCCATTATGGCATTTGAGGTTATGGATAGTTATGGTTGTCCTCATGATGTGGTGGCATTAAATTCACTTCTAAGTGCTATTTGTAGGGATGGAAACACTAAGGATGCGTATGAGTTTTTGCAAATAGCAAAAGATAAGATTAGGCCTGACCCGGATTCTTATGCCATTCTGTTAGAAGGGTGGGAAACTGAAGGAAATGTGGTATGTTCCAAGCAAACTTTTGGAGAGATGGTAGAGGAGATTGGTTGGGATCCCACCAATACCCCTGCATATAATTCCTTTTTATGTGTTTTGCTGAAGGGCCCCGATGGGCTACACGAGGCATTGAGATTCTTCAAAAGATTAAAAGATAAAATGTGCTATCCAGGATTTAAGTTTTTCAAGGTTGCCCTTGATGAGTGCGTAAAGAATGGTGATGCAAAGGCGGCGAGTTATCTTTGGAATGAAGTCCTAGAGAGTATTAATTTTCAGCCTGATACACATATGTATAATTCAATGATTGTTATATGTTGTCATCAAAATGATACTGACGCAGCTAGAAGGTTGCTCGATCAGATGATATGTTATGGGGCATTCCCAGATATGGAAACTTACAATTTGTTGTTTCAGTTCTTATTAAAGAGCAGGAAATTAAGGGACGCTTCAGCTATATTTGATGAAATGATTAAAAATGAATTTGTTCCAAGCCGTGCTAATTGTAATGCAGCAGTTAGGATTTACATTGAAAGTGAGGACCCAAATGGGGCCATAAAAGTATGGAAATGTATGCTTAAAAGCTATGAATCTGATCTTGAAGATATTGGTAATTTCTTGATTGTAGGGCTCCGAGATCAAAAGAGGTTGCCAGAAGCAGTAAAATATGCTCATGAGATGATTGATAGAGGAGTCATGTTGAAACATTCGACTTTGTCCAAACTAAAACAGAGCCTTCACGAAGTTAGAAAGGAATTTATATATGACGAGCTTATGACAAAGTTGAAAGTTCCTGAGTAA

mRNA sequence

ATGGGAGAGAACAACAAACGGCGACTCTCCGACCACCACCCCCAACGGAGCAAGAAGCATCCACCTTCATCTTCTCCTTCTTCCGCTCCAAGTCCTCTTCCCTCAAGCTCAGTTTCTCAACAACAGTTCCACGGCCCCTCACCGGAACGCCAAAGGAACAAGATCCCACATTTCGTTTCCTACCTTGAGTTCCCCAATTTGCCGTTTAAGGTCAAATTACTGTGTGAAATCATCGCCAATTCCCCATCCATCGACGTCGAGAGGATTCTCGAAGACACCGGCGTTCAGGTCACTCAAGAAGATGTCGAGGAGGTCCTTAAATTGTCTTACAAGTTTCCAGGATCCTCTGTTAAATTTTTCCGCTGGTCCGGCCGGAAGCTCAACGACCAACACAGCCCCTATGCTTGGAATTTGATCATCGACATGTTGGGTAAGAATTTATATTTCGAACCAATGTGGGATGCTATGAAATCGATGAAGAAAGAAGGGTTGCTCTCTTTGGCGACTTTTGCTTCGGTATTTAGTAGTTATATCGTTGCAAACTGTGTTAAGGACGCCATTATGGCATTTGAGGTTATGGATAGTTATGGTTGTCCTCATGATGTGGTGGCATTAAATTCACTTCTAAGTGCTATTTGTAGGGATGGAAACACTAAGGATGCGTATGAGTTTTTGCAAATAGCAAAAGATAAGATTAGGCCTGACCCGGATTCTTATGCCATTCTGTTAGAAGGGTGGGAAACTGAAGGAAATGTGGTATGTTCCAAGCAAACTTTTGGAGAGATGGTAGAGGAGATTGGTTGGGATCCCACCAATACCCCTGCATATAATTCCTTTTTATGTGTTTTGCTGAAGGGCCCCGATGGGCTACACGAGGCATTGAGATTCTTCAAAAGATTAAAAGATAAAATGTGCTATCCAGGATTTAAGTTTTTCAAGGTTGCCCTTGATGAGTGCGTAAAGAATGGTGATGCAAAGGCGGCGAGTTATCTTTGGAATGAAGTCCTAGAGAGTATTAATTTTCAGCCTGATACACATATGTATAATTCAATGATTGTTATATGTTGTCATCAAAATGATACTGACGCAGCTAGAAGGTTGCTCGATCAGATGATATGTTATGGGGCATTCCCAGATATGGAAACTTACAATTTGTTGTTTCAGTTCTTATTAAAGAGCAGGAAATTAAGGGACGCTTCAGCTATATTTGATGAAATGATTAAAAATGAATTTGTTCCAAGCCGTGCTAATTGTAATGCAGCAGTTAGGATTTACATTGAAAGTGAGGACCCAAATGGGGCCATAAAAGTATGGAAATGTATGCTTAAAAGCTATGAATCTGATCTTGAAGATATTGGTAATTTCTTGATTGTAGGGCTCCGAGATCAAAAGAGGTTGCCAGAAGCAGTAAAATATGCTCATGAGATGATTGATAGAGGAGTCATGTTGAAACATTCGACTTTGTCCAAACTAAAACAGAGCCTTCACGAAGTTAGAAAGGAATTTATATATGACGAGCTTATGACAAAGTTGAAAGTTCCTGAGTAA

Coding sequence (CDS)

ATGGGAGAGAACAACAAACGGCGACTCTCCGACCACCACCCCCAACGGAGCAAGAAGCATCCACCTTCATCTTCTCCTTCTTCCGCTCCAAGTCCTCTTCCCTCAAGCTCAGTTTCTCAACAACAGTTCCACGGCCCCTCACCGGAACGCCAAAGGAACAAGATCCCACATTTCGTTTCCTACCTTGAGTTCCCCAATTTGCCGTTTAAGGTCAAATTACTGTGTGAAATCATCGCCAATTCCCCATCCATCGACGTCGAGAGGATTCTCGAAGACACCGGCGTTCAGGTCACTCAAGAAGATGTCGAGGAGGTCCTTAAATTGTCTTACAAGTTTCCAGGATCCTCTGTTAAATTTTTCCGCTGGTCCGGCCGGAAGCTCAACGACCAACACAGCCCCTATGCTTGGAATTTGATCATCGACATGTTGGGTAAGAATTTATATTTCGAACCAATGTGGGATGCTATGAAATCGATGAAGAAAGAAGGGTTGCTCTCTTTGGCGACTTTTGCTTCGGTATTTAGTAGTTATATCGTTGCAAACTGTGTTAAGGACGCCATTATGGCATTTGAGGTTATGGATAGTTATGGTTGTCCTCATGATGTGGTGGCATTAAATTCACTTCTAAGTGCTATTTGTAGGGATGGAAACACTAAGGATGCGTATGAGTTTTTGCAAATAGCAAAAGATAAGATTAGGCCTGACCCGGATTCTTATGCCATTCTGTTAGAAGGGTGGGAAACTGAAGGAAATGTGGTATGTTCCAAGCAAACTTTTGGAGAGATGGTAGAGGAGATTGGTTGGGATCCCACCAATACCCCTGCATATAATTCCTTTTTATGTGTTTTGCTGAAGGGCCCCGATGGGCTACACGAGGCATTGAGATTCTTCAAAAGATTAAAAGATAAAATGTGCTATCCAGGATTTAAGTTTTTCAAGGTTGCCCTTGATGAGTGCGTAAAGAATGGTGATGCAAAGGCGGCGAGTTATCTTTGGAATGAAGTCCTAGAGAGTATTAATTTTCAGCCTGATACACATATGTATAATTCAATGATTGTTATATGTTGTCATCAAAATGATACTGACGCAGCTAGAAGGTTGCTCGATCAGATGATATGTTATGGGGCATTCCCAGATATGGAAACTTACAATTTGTTGTTTCAGTTCTTATTAAAGAGCAGGAAATTAAGGGACGCTTCAGCTATATTTGATGAAATGATTAAAAATGAATTTGTTCCAAGCCGTGCTAATTGTAATGCAGCAGTTAGGATTTACATTGAAAGTGAGGACCCAAATGGGGCCATAAAAGTATGGAAATGTATGCTTAAAAGCTATGAATCTGATCTTGAAGATATTGGTAATTTCTTGATTGTAGGGCTCCGAGATCAAAAGAGGTTGCCAGAAGCAGTAAAATATGCTCATGAGATGATTGATAGAGGAGTCATGTTGAAACATTCGACTTTGTCCAAACTAAAACAGAGCCTTCACGAAGTTAGAAAGGAATTTATATATGACGAGCTTATGACAAAGTTGAAAGTTCCTGAGTAA

Protein sequence

MGENNKRRLSDHHPQRSKKHPPSSSPSSAPSPLPSSSVSQQQFHGPSPERQRNKIPHFVSYLEFPNLPFKVKLLCEIIANSPSIDVERILEDTGVQVTQEDVEEVLKLSYKFPGSSVKFFRWSGRKLNDQHSPYAWNLIIDMLGKNLYFEPMWDAMKSMKKEGLLSLATFASVFSSYIVANCVKDAIMAFEVMDSYGCPHDVVALNSLLSAICRDGNTKDAYEFLQIAKDKIRPDPDSYAILLEGWETEGNVVCSKQTFGEMVEEIGWDPTNTPAYNSFLCVLLKGPDGLHEALRFFKRLKDKMCYPGFKFFKVALDECVKNGDAKAASYLWNEVLESINFQPDTHMYNSMIVICCHQNDTDAARRLLDQMICYGAFPDMETYNLLFQFLLKSRKLRDASAIFDEMIKNEFVPSRANCNAAVRIYIESEDPNGAIKVWKCMLKSYESDLEDIGNFLIVGLRDQKRLPEAVKYAHEMIDRGVMLKHSTLSKLKQSLHEVRKEFIYDELMTKLKVPE
Homology
BLAST of MS027539 vs. NCBI nr
Match: XP_022141574.1 (pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like [Momordica charantia])

HSP 1 Score: 1046.6 bits (2705), Expect = 7.1e-302
Identity = 513/515 (99.61%), Postives = 514/515 (99.81%), Query Frame = 0

Query: 1   MGENNKRRLSDHHPQRSKKHPPSSSPSSAPSPLPSSSVSQQQFHGPSPERQRNKIPHFVS 60
           MGENNKRRLSDHHPQRSKKHPPSSSPSSAPSPLPSSSVSQQQFHGPSPERQRNKIPHFVS
Sbjct: 1   MGENNKRRLSDHHPQRSKKHPPSSSPSSAPSPLPSSSVSQQQFHGPSPERQRNKIPHFVS 60

Query: 61  YLEFPNLPFKVKLLCEIIANSPSIDVERILEDTGVQVTQEDVEEVLKLSYKFPGSSVKFF 120
           YLEFPNLPFKVKLLCEIIANSPSIDVERILEDTGVQVTQEDVEEVLKLSYKFPGSSVKFF
Sbjct: 61  YLEFPNLPFKVKLLCEIIANSPSIDVERILEDTGVQVTQEDVEEVLKLSYKFPGSSVKFF 120

Query: 121 RWSGRKLNDQHSPYAWNLIIDMLGKNLYFEPMWDAMKSMKKEGLLSLATFASVFSSYIVA 180
           RWSGRKLNDQHSPYAWNLIIDMLGKNLYFEPMWDAMKSMKKEGLLSLATFASVFSSYIVA
Sbjct: 121 RWSGRKLNDQHSPYAWNLIIDMLGKNLYFEPMWDAMKSMKKEGLLSLATFASVFSSYIVA 180

Query: 181 NCVKDAIMAFEVMDSYGCPHDVVALNSLLSAICRDGNTKDAYEFLQIAKDKIRPDPDSYA 240
           NCVKDAIM FEVMDSYGCPHDVVALNSLLSAICRDGNTKDAYEFLQIAKDKIRPDPDSYA
Sbjct: 181 NCVKDAIMTFEVMDSYGCPHDVVALNSLLSAICRDGNTKDAYEFLQIAKDKIRPDPDSYA 240

Query: 241 ILLEGWETEGNVVCSKQTFGEMVEEIGWDPTNTPAYNSFLCVLLKGPDGLHEALRFFKRL 300
           ILLEGWETEGNVVCSKQTFGEMVEEIGWDPTNTPAYNSFLCVLLKGPDGLHEALRFFKRL
Sbjct: 241 ILLEGWETEGNVVCSKQTFGEMVEEIGWDPTNTPAYNSFLCVLLKGPDGLHEALRFFKRL 300

Query: 301 KDKMCYPGFKFFKVALDECVKNGDAKAASYLWNEVLESINFQPDTHMYNSMIVICCHQND 360
           KDKMCYPGFKFFKVALDECVKNGDAKAASYLWNEVLESINFQPDTHMYNSMIVICCHQND
Sbjct: 301 KDKMCYPGFKFFKVALDECVKNGDAKAASYLWNEVLESINFQPDTHMYNSMIVICCHQND 360

Query: 361 TDAARRLLDQMICYGAFPDMETYNLLFQFLLKSRKLRDASAIFDEMIKNEFVPSRANCNA 420
           TDAARRLLDQMICYGAFPDMETYNLLFQFLLKSRKLRDASAIFDEMIKNEFVPSRANCNA
Sbjct: 361 TDAARRLLDQMICYGAFPDMETYNLLFQFLLKSRKLRDASAIFDEMIKNEFVPSRANCNA 420

Query: 421 AVRIYIESEDPNGAIKVWKCMLKSYESDLEDIGNFLIVGLRDQKRLPEAVKYAHEMIDRG 480
           AVRIYIESEDPNGAIKVWKCMLKSYESDLEDIGNFLIVGL+DQKRLPEAVKYAHEMIDRG
Sbjct: 421 AVRIYIESEDPNGAIKVWKCMLKSYESDLEDIGNFLIVGLQDQKRLPEAVKYAHEMIDRG 480

Query: 481 VMLKHSTLSKLKQSLHEVRKEFIYDELMTKLKVPE 516
           VMLKHSTLSKLKQSLHEVRKEFIYDELMTKLKVPE
Sbjct: 481 VMLKHSTLSKLKQSLHEVRKEFIYDELMTKLKVPE 515

BLAST of MS027539 vs. NCBI nr
Match: XP_038906581.1 (pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 895.2 bits (2312), Expect = 2.7e-256
Identity = 432/512 (84.38%), Postives = 473/512 (92.38%), Query Frame = 0

Query: 1   MGENNKRRLSDHHPQRSKKHPPSSSPSSAPSPLPSSSVSQQQFHGPSPERQRNKIPHFVS 60
           MGE NKRRLSDH  QRSKKH PSSSPSSA +P+PS+S+SQ  F   SPE QR+  PHFVS
Sbjct: 1   MGETNKRRLSDHTHQRSKKHLPSSSPSSARTPIPSNSLSQSHFQNSSPEPQRHSTPHFVS 60

Query: 61  YLEFPNLPFKVKLLCEIIANSPSIDVERILEDTGVQVTQEDVEEVLKLSYKFPGSSVKFF 120
           YL+FPNL  K+KL+CEIIANS S+DVER LE+TG+Q TQEDVEEVLKLSYKFPGSSVKFF
Sbjct: 61  YLDFPNLSVKIKLMCEIIANSQSLDVERALEETGIQATQEDVEEVLKLSYKFPGSSVKFF 120

Query: 121 RWSGRKLNDQHSPYAWNLIIDMLGKNLYFEPMWDAMKSMKKEGLLSLATFASVFSSYIVA 180
           RWSGRKLNDQHSPYAWNLIIDMLGKNLYF+PMWDAMKSMKKEGLLSLATF SVFSSYIVA
Sbjct: 121 RWSGRKLNDQHSPYAWNLIIDMLGKNLYFDPMWDAMKSMKKEGLLSLATFGSVFSSYIVA 180

Query: 181 NCVKDAIMAFEVMDSYGCPHDVVALNSLLSAICRDGNTKDAYEFLQIAKDKIRPDPDSYA 240
           N VK+AIMAFEVMD+YGCPHDVVALNSLLSAICRDGNTKDA +FLQIAK KIRPDPDSYA
Sbjct: 181 NRVKEAIMAFEVMDTYGCPHDVVALNSLLSAICRDGNTKDADDFLQIAKRKIRPDPDSYA 240

Query: 241 ILLEGWETEGNVVCSKQTFGEMVEEIGWDPTNTPAYNSFLCVLLKGPDGLHEALRFFKRL 300
           I+LEGWE+EGN+VC+++TFGEM+EEIGWDPTNTPAYNSFLCVLLK PDGLHEAL FFKRL
Sbjct: 241 IVLEGWESEGNIVCARKTFGEMIEEIGWDPTNTPAYNSFLCVLLKDPDGLHEALVFFKRL 300

Query: 301 KDKMCYPGFKFFKVALDECVKNGDAKAASYLWNEVLESINFQPDTHMYNSMIVICCHQND 360
           KDK CYPGFKFFK+ALDECVKNGD KA  YLWNE++ESINFQPDTHMYNSMIV+ CHQND
Sbjct: 301 KDKFCYPGFKFFKLALDECVKNGDIKAGKYLWNEIIESINFQPDTHMYNSMIVLFCHQND 360

Query: 361 TDAARRLLDQMICYGAFPDMETYNLLFQFLLKSRKLRDASAIFDEMIKNEFVPSRANCNA 420
           TD ARRLLD+MICYGAFP++ETYNLLFQFLLK RKLRDASA+FDEMIKNEFVPSRANCNA
Sbjct: 361 TDTARRLLDEMICYGAFPNVETYNLLFQFLLKGRKLRDASAVFDEMIKNEFVPSRANCNA 420

Query: 421 AVRIYIESEDPNGAIKVWKCMLKSYESDLEDIGNFLIVGLRDQKRLPEAVKYAHEMIDRG 480
           A+  YIES+DPN A+KVWKCMLK+Y+SDLE+IGNFLIVGLRDQKRLPEAVKYAHEMIDR 
Sbjct: 421 AIGSYIESQDPNEALKVWKCMLKNYDSDLEEIGNFLIVGLRDQKRLPEAVKYAHEMIDRL 480

Query: 481 VMLKHSTLSKLKQSLHEVRKEFIYDELMTKLK 513
           +MLK+STL+KLKQSL EV+K  +YDELM KLK
Sbjct: 481 IMLKNSTLAKLKQSLFEVKKGSLYDELMVKLK 512

BLAST of MS027539 vs. NCBI nr
Match: XP_022963446.1 (pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 883.2 bits (2281), Expect = 1.0e-252
Identity = 424/515 (82.33%), Postives = 476/515 (92.43%), Query Frame = 0

Query: 1   MGENNKRRLSDHHPQRSKKHPPSSSPSSAPSPLPSSSVSQQQFHGPSPERQRNKIPHFVS 60
           MGENNKRRLSD+  QRSKKH  SSSPSSA +P  S+S+S  +F+ PSPE  R+K PHFVS
Sbjct: 1   MGENNKRRLSDNGHQRSKKHQSSSSPSSARTPTRSTSISHARFNNPSPEPSRSKTPHFVS 60

Query: 61  YLEFPNLPFKVKLLCEIIANSPSIDVERILEDTGVQVTQEDVEEVLKLSYKFPGSSVKFF 120
           YL+FPNLPFK+KLLCEIIAN+ SID+E +LE+TGVQV++EDVE+VLKLSYKFPGSS+KFF
Sbjct: 61  YLDFPNLPFKIKLLCEIIANASSIDLEIVLEETGVQVSREDVEDVLKLSYKFPGSSMKFF 120

Query: 121 RWSGRKLNDQHSPYAWNLIIDMLGKNLYFEPMWDAMKSMKKEGLLSLATFASVFSSYIVA 180
           RWSGRKLNDQHSPYAWNLI+DMLGKNL+FEPMWDAMKSMK EGL+SLATFASVFSSYIVA
Sbjct: 121 RWSGRKLNDQHSPYAWNLIVDMLGKNLHFEPMWDAMKSMKNEGLISLATFASVFSSYIVA 180

Query: 181 NCVKDAIMAFEVMDSYGCPHDVVALNSLLSAICRDGNTKDAYEFLQIAKDKIRPDPDSYA 240
           N VKDAI++FEVMD YGCP DVVALNSLLSAICRDGNTKDA EFLQIAK KIRPDPDSYA
Sbjct: 181 NRVKDAIVSFEVMDLYGCPRDVVALNSLLSAICRDGNTKDADEFLQIAKGKIRPDPDSYA 240

Query: 241 ILLEGWETEGNVVCSKQTFGEMVEEIGWDPTNTPAYNSFLCVLLKGPDGLHEALRFFKRL 300
           I+LEGWE+EGN+VC++QTF EM+E+IGWDPTNTPAYNSFLC+LLK P+GLHEAL FFKRL
Sbjct: 241 IVLEGWESEGNIVCARQTFVEMIEQIGWDPTNTPAYNSFLCLLLKDPNGLHEALMFFKRL 300

Query: 301 KDKMCYPGFKFFKVALDECVKNGDAKAASYLWNEVLESINFQPDTHMYNSMIVICCHQND 360
           KDKMCYPGFKFFK+ALDEC KN D KA  YLWNE++ESINFQPDTHMYNSMIV+CCHQND
Sbjct: 301 KDKMCYPGFKFFKLALDECAKNRDVKAGKYLWNEIIESINFQPDTHMYNSMIVLCCHQND 360

Query: 361 TDAARRLLDQMICYGAFPDMETYNLLFQFLLKSRKLRDASAIFDEMIKNEFVPSRANCNA 420
            DAARRLLD+MI YGAFP++ETYNLLF+FLLK +KLR+AS+IFDEM+KNEFVPS ANC A
Sbjct: 361 ADAARRLLDEMISYGAFPNLETYNLLFRFLLKEKKLREASSIFDEMVKNEFVPSHANCKA 420

Query: 421 AVRIYIESEDPNGAIKVWKCMLKSYESDLEDIGNFLIVGLRDQKRLPEAVKYAHEMIDRG 480
           AVRIYIE+EDPNGAIKVWKCM+K YESDLE+IGNFLIVGL+DQ+RLPEAVKYA+EMIDRG
Sbjct: 421 AVRIYIENEDPNGAIKVWKCMVKIYESDLEEIGNFLIVGLQDQRRLPEAVKYANEMIDRG 480

Query: 481 VMLKHSTLSKLKQSLHEVRKEFIYDELMTKLKVPE 516
           ++LKHSTLSKLKQSL EVRKEF+YDELM KLK  E
Sbjct: 481 IILKHSTLSKLKQSLFEVRKEFMYDELMMKLKFSE 515

BLAST of MS027539 vs. NCBI nr
Match: XP_023511926.1 (pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like [Cucurbita pepo subsp. pepo] >XP_023511935.1 pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 878.2 bits (2268), Expect = 3.4e-251
Identity = 423/515 (82.14%), Postives = 472/515 (91.65%), Query Frame = 0

Query: 1   MGENNKRRLSDHHPQRSKKHPPSSSPSSAPSPLPSSSVSQQQFHGPSPERQRNKIPHFVS 60
           MGENNKRRLSD+  QRSKKH  SSSPSSA +P+ S S S  +F+ PSPE  R+K PHFVS
Sbjct: 1   MGENNKRRLSDNGHQRSKKHQSSSSPSSARTPIRSRSTSHTRFNNPSPEPSRSKTPHFVS 60

Query: 61  YLEFPNLPFKVKLLCEIIANSPSIDVERILEDTGVQVTQEDVEEVLKLSYKFPGSSVKFF 120
           YL+FPNLPFK+KLLCEIIAN+ SID+E +LE+TGVQV++EDVE+VLKLSYKFPGSS+KFF
Sbjct: 61  YLDFPNLPFKIKLLCEIIANASSIDLEIVLEETGVQVSREDVEDVLKLSYKFPGSSMKFF 120

Query: 121 RWSGRKLNDQHSPYAWNLIIDMLGKNLYFEPMWDAMKSMKKEGLLSLATFASVFSSYIVA 180
           RWSGRKLNDQHSPYAWNLI+DMLGKNL+FEPMWDAMKSMK EGL+SLATFASVFSSYIVA
Sbjct: 121 RWSGRKLNDQHSPYAWNLIVDMLGKNLHFEPMWDAMKSMKNEGLISLATFASVFSSYIVA 180

Query: 181 NCVKDAIMAFEVMDSYGCPHDVVALNSLLSAICRDGNTKDAYEFLQIAKDKIRPDPDSYA 240
           N VKDAI++FEVMD YGCP DVVALNSLLSAICRDGNTKDA EFLQIAK KIRPDPDSYA
Sbjct: 181 NRVKDAIVSFEVMDRYGCPRDVVALNSLLSAICRDGNTKDADEFLQIAKGKIRPDPDSYA 240

Query: 241 ILLEGWETEGNVVCSKQTFGEMVEEIGWDPTNTPAYNSFLCVLLKGPDGLHEALRFFKRL 300
           I+LEGWE+EGN+VC++QTF EM+E+IGWDPTNTPAYNSFLCVLLK P+GLHEAL  FKRL
Sbjct: 241 IVLEGWESEGNIVCARQTFVEMIEQIGWDPTNTPAYNSFLCVLLKDPNGLHEALMSFKRL 300

Query: 301 KDKMCYPGFKFFKVALDECVKNGDAKAASYLWNEVLESINFQPDTHMYNSMIVICCHQND 360
           KDKMCYPGFKFFK+ALDEC KN D KA  YLW E++ESINFQPDTHMYNSMIV+CCHQND
Sbjct: 301 KDKMCYPGFKFFKLALDECAKNRDVKAGKYLWKEIMESINFQPDTHMYNSMIVLCCHQND 360

Query: 361 TDAARRLLDQMICYGAFPDMETYNLLFQFLLKSRKLRDASAIFDEMIKNEFVPSRANCNA 420
            DAARRLLD+MI YG FP++ETYNLLF+FLLK +KLR+AS+IFDEM+KNEFVPS ANC A
Sbjct: 361 ADAARRLLDEMISYGTFPNLETYNLLFRFLLKEKKLREASSIFDEMVKNEFVPSHANCKA 420

Query: 421 AVRIYIESEDPNGAIKVWKCMLKSYESDLEDIGNFLIVGLRDQKRLPEAVKYAHEMIDRG 480
           AVRIYIE+EDPNGAIKVWKCM+K YESDLE+IGNFLIVGL+DQKRLPEAVKYA+EMIDRG
Sbjct: 421 AVRIYIENEDPNGAIKVWKCMVKIYESDLEEIGNFLIVGLQDQKRLPEAVKYANEMIDRG 480

Query: 481 VMLKHSTLSKLKQSLHEVRKEFIYDELMTKLKVPE 516
           ++LKHSTLSKLKQSL EVRKEF+YDELM KLK  E
Sbjct: 481 IILKHSTLSKLKQSLFEVRKEFMYDELMMKLKFSE 515

BLAST of MS027539 vs. NCBI nr
Match: XP_022990962.1 (pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 874.0 bits (2257), Expect = 6.3e-250
Identity = 421/515 (81.75%), Postives = 472/515 (91.65%), Query Frame = 0

Query: 1   MGENNKRRLSDHHPQRSKKHPPSSSPSSAPSPLPSSSVSQQQFHGPSPERQRNKIPHFVS 60
           MGENNKRRLSD+  QRSKKH  SSSPSSA +P  S+S+S  +F+ PSPE  R+K PHFVS
Sbjct: 1   MGENNKRRLSDNGHQRSKKHQSSSSPSSARTPTRSTSISHPRFNNPSPEPSRSKTPHFVS 60

Query: 61  YLEFPNLPFKVKLLCEIIANSPSIDVERILEDTGVQVTQEDVEEVLKLSYKFPGSSVKFF 120
           YL+FPNLPFK+KLLCEIIAN+ SID+E +LE+TGVQV++EDVE+VLKLSYKFPGSS+KFF
Sbjct: 61  YLDFPNLPFKIKLLCEIIANASSIDLEIVLEETGVQVSREDVEDVLKLSYKFPGSSMKFF 120

Query: 121 RWSGRKLNDQHSPYAWNLIIDMLGKNLYFEPMWDAMKSMKKEGLLSLATFASVFSSYIVA 180
           RWSGRKLNDQHSPYAWNLI+D+LGKNL+FEPMWDAMKSMK EGL+SLATFASVFSSYIVA
Sbjct: 121 RWSGRKLNDQHSPYAWNLIVDILGKNLHFEPMWDAMKSMKNEGLISLATFASVFSSYIVA 180

Query: 181 NCVKDAIMAFEVMDSYGCPHDVVALNSLLSAICRDGNTKDAYEFLQIAKDKIRPDPDSYA 240
           N VKDAIM+FEVMD YGCP DVVALNSLLSAICRDGNTKDA EFLQIAK KIRPDPDSYA
Sbjct: 181 NRVKDAIMSFEVMDRYGCPRDVVALNSLLSAICRDGNTKDADEFLQIAKGKIRPDPDSYA 240

Query: 241 ILLEGWETEGNVVCSKQTFGEMVEEIGWDPTNTPAYNSFLCVLLKGPDGLHEALRFFKRL 300
           I+LEGWE+EGN+VC++QTF EM+E+IGWDPTNTPAYNSFLCVLLK P+GLHEAL  FKRL
Sbjct: 241 IVLEGWESEGNIVCARQTFVEMIEQIGWDPTNTPAYNSFLCVLLKDPNGLHEALMSFKRL 300

Query: 301 KDKMCYPGFKFFKVALDECVKNGDAKAASYLWNEVLESINFQPDTHMYNSMIVICCHQND 360
           KDKMCYPGFKFFK+ALDEC KN D KA  YLWNE++ESINFQPDTHMYNSMIV+CCHQND
Sbjct: 301 KDKMCYPGFKFFKLALDECAKNRDVKAGKYLWNEIVESINFQPDTHMYNSMIVLCCHQND 360

Query: 361 TDAARRLLDQMICYGAFPDMETYNLLFQFLLKSRKLRDASAIFDEMIKNEFVPSRANCNA 420
            DAARR+LD+MI YG FP++ETYNLLF++LLK +KLR+AS+IFDEMIKNEFVPS ANC A
Sbjct: 361 ADAARRVLDEMISYGTFPNLETYNLLFRYLLKEKKLREASSIFDEMIKNEFVPSHANCKA 420

Query: 421 AVRIYIESEDPNGAIKVWKCMLKSYESDLEDIGNFLIVGLRDQKRLPEAVKYAHEMIDRG 480
           AVRIYIE+EDPNGAIKVWKCM+K YESDLE+I NFLIVGL+DQKRLPEAVKYA+EMIDRG
Sbjct: 421 AVRIYIENEDPNGAIKVWKCMVKIYESDLEEIANFLIVGLQDQKRLPEAVKYANEMIDRG 480

Query: 481 VMLKHSTLSKLKQSLHEVRKEFIYDELMTKLKVPE 516
           ++LKHSTLSKLKQSL  VRKEF+YDELM KLK  E
Sbjct: 481 IILKHSTLSKLKQSLFVVRKEFMYDELMMKLKFTE 515

BLAST of MS027539 vs. ExPASy Swiss-Prot
Match: Q9FVX2 (Pentatricopeptide repeat-containing protein At1g77360, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g77360 PE=2 SV=2)

HSP 1 Score: 197.2 bits (500), Expect = 4.5e-49
Identity = 125/442 (28.28%), Postives = 228/442 (51.58%), Query Frame = 0

Query: 72  KLLCEIIANSPSIDVERILEDTGVQVTQEDVEEVLKLSYKFPGSSVKFFRWSGRKLNDQH 131
           K + +++ +SP + ++  L+ +G++V+QE VE+VL         + +FF+WS ++ + +H
Sbjct: 73  KNISKVLMSSPQLVLDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYRFFQWSEKQRHYEH 132

Query: 132 SPYAWNLIIDMLGKNLYFEPMWDAMKSMKKEGLLSLATFASVFSSYIVANCVKDAIMAFE 191
           S  A++++I+   K   ++ MWD + +M+K+ +L++ TF  V   Y  A  V +AI AF 
Sbjct: 133 SVRAYHMMIESTAKIRQYKLMWDLINAMRKKKMLNVETFCIVMRKYARAQKVDEAIYAFN 192

Query: 192 VMDSYGCPHDVVALNSLLSAICRDGNTKDAYEFLQIAKDKIRPDPDSYAILLEGWETEGN 251
           VM+ Y  P ++VA N LLSA+C+  N + A E  +  +D+  PD  +Y+ILLEGW  E N
Sbjct: 193 VMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEPN 252

Query: 252 VVCSKQTFGEMVEEIGWDPTNTPAYNSFLCVLLKGPDGLHEALRFFKRLKDKMCYPGFKF 311
           +  +++ F EM+ + G  P +   Y+  + +L K    + EAL   + +   +C P    
Sbjct: 253 LPKAREVFREMI-DAGCHP-DIVTYSIMVDILCKA-GRVDEALGIVRSMDPSICKPTTFI 312

Query: 312 FKVALDECVKNGDAKAASYLWNEVLESINFQPDTHMYNSMIVICCHQNDTDAARRLLDQM 371
           + V +         + A   + E +E    + D  ++NS+I   C  N      R+L +M
Sbjct: 313 YSVLVHTYGTENRLEEAVDTFLE-MERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEM 372

Query: 372 ICYGAFPDMETYNLLFQFLLKSRKLRDASAIFDEMIKNEFVPSRANCNAAVRIYIESEDP 431
              G  P+ ++ N++ + L++  +  +A  +F +MIK    P        ++++ E ++ 
Sbjct: 373 KSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIK-VCEPDADTYTMVIKMFCEKKEM 432

Query: 432 NGAIKVWKCMLKSYESDLEDIGNFLIVGLRDQKRLPEAVKYAHEMIDRGVMLKHSTLSKL 491
             A KVWK M K          + LI GL +++   +A     EMI+ G+     T  +L
Sbjct: 433 ETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRL 492

Query: 492 KQSLHEVRKEFIYDELMTKLKV 514
           +Q L +  +E +   L  K+ V
Sbjct: 493 RQLLIKEEREDVLKFLNEKMNV 509

BLAST of MS027539 vs. ExPASy Swiss-Prot
Match: Q9C9A2 (Pentatricopeptide repeat-containing protein At1g71060, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g71060 PE=2 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 1.3e-40
Identity = 120/434 (27.65%), Postives = 209/434 (48.16%), Query Frame = 0

Query: 74  LCEIIANSPSIDVERILEDTGVQVTQEDVEEVLKLSYKFPGSSVKFFRWSGRKLNDQHSP 133
           +C+I+       VE +L +  V+++   +EEVLK        ++  F+W+  +   +H+ 
Sbjct: 69  ICKILTKFTDSKVETLLNEASVKLSPALIEEVLKKLSNAGVLALSVFKWAENQKGFKHTT 128

Query: 134 YAWNLIIDMLGKNLYFEPMWDAMKSMKKEGLLSLATFASVFSSYIVANCVKDAIMAFEVM 193
             +N +I+ LGK   F+ +W  +  MK + LLS  TFA +   Y  A  VK+AI AF  M
Sbjct: 129 SNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKETFALISRRYARARKVKEAIGAFHKM 188

Query: 194 DSYGCPHDVVALNSLLSAICRDGNTKDAYE-FLQIAKDKIRPDPDSYAILLEGWETEGNV 253
           + +G   +    N +L  + +  N  DA + F ++ K +  PD  SY ILLEGW  E N+
Sbjct: 189 EEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNL 248

Query: 254 VCSKQTFGEMVEEIGWDPTNTPAYNSFLCVLLKGPDGLHEALRFFKRLKDKMCYPGFKFF 313
           +   +   EM +E G++P +  AY   +    K      EA+RFF  ++ + C P    F
Sbjct: 249 LRVDEVNREMKDE-GFEP-DVVAYGIIINAHCKAKK-YEEAIRFFNEMEQRNCKPSPHIF 308

Query: 314 KVALDECVKNGDAKAASYLWNEVLESINFQPDTHMYNSMIVICCHQNDTDAARRLLDQMI 373
              ++          A   + E  +S  F  +   YN+++   C     + A + +D+M 
Sbjct: 309 CSLINGLGSEKKLNDALEFF-ERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMR 368

Query: 374 CYGAFPDMETYNLLFQFLLKSRKLRDASAIFDEMIKNEFVPSRANCNAAVRIYIESEDPN 433
             G  P+  TY+++   L++ ++ ++A  ++  M      P+ +     VR++   E  +
Sbjct: 369 LKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLD 428

Query: 434 GAIKVWKCMLKSYESDLEDIGNFLIVGLRDQKRLPEAVKYAHEMIDRGVMLKHSTLSKLK 493
            AIK+W  M          + + LI  L  + +L EA +Y +EM+D G+       S+LK
Sbjct: 429 MAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLK 488

Query: 494 QS-LHEVRKEFIYD 506
           Q+ L E RK+ + D
Sbjct: 489 QTLLDEGRKDKVTD 495

BLAST of MS027539 vs. ExPASy Swiss-Prot
Match: Q9LZP3 (Pentatricopeptide repeat-containing protein At3g62470, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g62470 PE=2 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 2.5e-39
Identity = 115/456 (25.22%), Postives = 218/456 (47.81%), Query Frame = 0

Query: 59  VSYLEFPNLPFKVKLLCEIIANSPSID--VERILEDTGVQVTQEDVEEVLKLSYKFPGSS 118
           VS +E    P +V+ +C++I    ++D  +E +L++  + ++ + + EVL+        +
Sbjct: 119 VSCVESSTNPEEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPA 178

Query: 119 VKFFRWSGRKLNDQHSPYAWNLIIDMLGKNLYFEPMWDAMKSMKKEGLLSLATFASVFSS 178
            +FF W+  +    H    +N ++ +L K   FE M   ++ M  +GLL++ TF     +
Sbjct: 179 FRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKA 238

Query: 179 YIVANCVKDAIMAFEVMDSYGCPHDVVALNSLLSAICRDGNTKDAYEFLQIAKDKIRPDP 238
           +  A   K A+  FE+M  Y     V  +N LL ++ R    K+A       K++  P+ 
Sbjct: 239 FAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNM 298

Query: 239 DSYAILLEGWETEGNVVCSKQTFGEMVEEIGWDPTNTPAYNSFLCVLLKGPDGLHEALRF 298
            +Y +LL GW    N++ + + + +M+++ G  P +  A+N  L  LL+      +A++ 
Sbjct: 299 MTYTVLLNGWCRVRNLIEAARIWNDMIDQ-GLKP-DIVAHNVMLEGLLRSRK-KSDAIKL 358

Query: 299 FKRLKDKMCYPGFKFFKVALDECVKNGDAKAASYLWNEVLESINFQPDTHMYNSMIVICC 358
           F  +K K   P  + + + + +  K    + A   ++++++S   QPD  +Y  +I    
Sbjct: 359 FHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDS-GLQPDAAVYTCLITGFG 418

Query: 359 HQNDTDAARRLLDQMICYGAFPDMETYNLLFQFLLKSRKLRDASAIFDEMIKNEFVPSRA 418
            Q   D    LL +M   G  PD +TYN L + +   +    A+ I+++MI+NE  PS  
Sbjct: 419 TQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIH 478

Query: 419 NCNAAVRIYIESEDPNGAIKVWKCMLKSYESDLEDIGNFLIVGLRDQKRLPEAVKYAHEM 478
             N  ++ Y  + +      VW+ M+K      ++    LI GL  + +  EA +Y  EM
Sbjct: 479 TFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEM 538

Query: 479 IDRGVMLKHSTLSKLKQSLHEVRKEFIYDELMTKLK 513
           +D+G+       +K     H   +  I++EL  + K
Sbjct: 539 LDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAK 570

BLAST of MS027539 vs. ExPASy Swiss-Prot
Match: Q3EAF8 (Pentatricopeptide repeat-containing protein At3g62540, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g62540 PE=2 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 1.2e-38
Identity = 114/456 (25.00%), Postives = 216/456 (47.37%), Query Frame = 0

Query: 59  VSYLEFPNLPFKVKLLCEIIANSPSID--VERILEDTGVQVTQEDVEEVLKLSYKFPGSS 118
           VS +E    P +V+ +C++I    ++D  +E +L++  + ++ + + EVL+        +
Sbjct: 119 VSCVESSTNPEEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPA 178

Query: 119 VKFFRWSGRKLNDQHSPYAWNLIIDMLGKNLYFEPMWDAMKSMKKEGLLSLATFASVFSS 178
            +FF W+  +    H+   +N ++ +L K   FE M   ++ M  +GLL++ TF     +
Sbjct: 179 FRFFCWAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKA 238

Query: 179 YIVANCVKDAIMAFEVMDSYGCPHDVVALNSLLSAICRDGNTKDAYEFLQIAKDKIRPDP 238
           +  A   K A+  FE+M  Y     V  +N LL ++ R    K+A       K++  P+ 
Sbjct: 239 FAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNM 298

Query: 239 DSYAILLEGWETEGNVVCSKQTFGEMVEEIGWDPTNTPAYNSFLCVLLKGPDGLHEALRF 298
            +Y +LL GW    N++ + + + +M++  G  P +  A+N  L  LL+      +A++ 
Sbjct: 299 MTYTVLLNGWCRVRNLIEAARIWNDMIDH-GLKP-DIVAHNVMLEGLLRSMK-KSDAIKL 358

Query: 299 FKRLKDKMCYPGFKFFKVALDECVKNGDAKAASYLWNEVLESINFQPDTHMYNSMIVICC 358
           F  +K K   P  + + + + +  K    + A   ++++++S   QPD  +Y  +I    
Sbjct: 359 FHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDS-GLQPDAAVYTCLITGFG 418

Query: 359 HQNDTDAARRLLDQMICYGAFPDMETYNLLFQFLLKSRKLRDASAIFDEMIKNEFVPSRA 418
            Q   D    LL +M   G  PD +TYN L + +   +     + I+++MI+NE  PS  
Sbjct: 419 TQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIH 478

Query: 419 NCNAAVRIYIESEDPNGAIKVWKCMLKSYESDLEDIGNFLIVGLRDQKRLPEAVKYAHEM 478
             N  ++ Y  + +      VW  M+K      ++    LI GL  + +  EA +Y  EM
Sbjct: 479 TFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEM 538

Query: 479 IDRGVMLKHSTLSKLKQSLHEVRKEFIYDELMTKLK 513
           +D+G+       +K     H   +  I++EL  + K
Sbjct: 539 LDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAK 570

BLAST of MS027539 vs. ExPASy Swiss-Prot
Match: Q9LEQ7 (Pentatricopeptide repeat-containing protein At5g14820, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g14820 PE=2 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 1.6e-38
Identity = 114/456 (25.00%), Postives = 215/456 (47.15%), Query Frame = 0

Query: 59  VSYLEFPNLPFKVKLLCEIIANSPSID--VERILEDTGVQVTQEDVEEVLKLSYKFPGSS 118
           VS +E    P +V+ +C++I    ++D  +E +L++  + ++ + + EVL+        +
Sbjct: 118 VSCVESSTNPEEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPA 177

Query: 119 VKFFRWSGRKLNDQHSPYAWNLIIDMLGKNLYFEPMWDAMKSMKKEGLLSLATFASVFSS 178
            +FF W+  +    H    +N ++ +L K   FE M   ++ M  +GLL++ TF     +
Sbjct: 178 FRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKA 237

Query: 179 YIVANCVKDAIMAFEVMDSYGCPHDVVALNSLLSAICRDGNTKDAYEFLQIAKDKIRPDP 238
           +  A   K A+  FE+M  Y     V  +N LL ++ R    K+A       K++  P+ 
Sbjct: 238 FAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNM 297

Query: 239 DSYAILLEGWETEGNVVCSKQTFGEMVEEIGWDPTNTPAYNSFLCVLLKGPDGLHEALRF 298
            +Y +LL GW    N++ + + + +M++  G  P +  A+N  L  LL+      +A++ 
Sbjct: 298 MTYTVLLNGWCRVRNLIEAARIWNDMIDH-GLKP-DIVAHNVMLEGLLRSMK-KSDAIKL 357

Query: 299 FKRLKDKMCYPGFKFFKVALDECVKNGDAKAASYLWNEVLESINFQPDTHMYNSMIVICC 358
           F  +K K   P  + + + + +  K    + A   ++++++S   QPD  +Y  +I    
Sbjct: 358 FHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDS-GLQPDAAVYTCLITGFG 417

Query: 359 HQNDTDAARRLLDQMICYGAFPDMETYNLLFQFLLKSRKLRDASAIFDEMIKNEFVPSRA 418
            Q   D    LL +M   G  PD +TYN L + +   +     + I+++MI+NE  PS  
Sbjct: 418 TQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIH 477

Query: 419 NCNAAVRIYIESEDPNGAIKVWKCMLKSYESDLEDIGNFLIVGLRDQKRLPEAVKYAHEM 478
             N  ++ Y  + +      VW  M+K      ++    LI GL  + +  EA +Y  EM
Sbjct: 478 TFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEM 537

Query: 479 IDRGVMLKHSTLSKLKQSLHEVRKEFIYDELMTKLK 513
           +D+G+       +K     H   +  I++EL  + K
Sbjct: 538 LDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAK 569

BLAST of MS027539 vs. ExPASy TrEMBL
Match: A0A6J1CJ17 (pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like OS=Momordica charantia OX=3673 GN=LOC111011904 PE=4 SV=1)

HSP 1 Score: 1046.6 bits (2705), Expect = 3.5e-302
Identity = 513/515 (99.61%), Postives = 514/515 (99.81%), Query Frame = 0

Query: 1   MGENNKRRLSDHHPQRSKKHPPSSSPSSAPSPLPSSSVSQQQFHGPSPERQRNKIPHFVS 60
           MGENNKRRLSDHHPQRSKKHPPSSSPSSAPSPLPSSSVSQQQFHGPSPERQRNKIPHFVS
Sbjct: 1   MGENNKRRLSDHHPQRSKKHPPSSSPSSAPSPLPSSSVSQQQFHGPSPERQRNKIPHFVS 60

Query: 61  YLEFPNLPFKVKLLCEIIANSPSIDVERILEDTGVQVTQEDVEEVLKLSYKFPGSSVKFF 120
           YLEFPNLPFKVKLLCEIIANSPSIDVERILEDTGVQVTQEDVEEVLKLSYKFPGSSVKFF
Sbjct: 61  YLEFPNLPFKVKLLCEIIANSPSIDVERILEDTGVQVTQEDVEEVLKLSYKFPGSSVKFF 120

Query: 121 RWSGRKLNDQHSPYAWNLIIDMLGKNLYFEPMWDAMKSMKKEGLLSLATFASVFSSYIVA 180
           RWSGRKLNDQHSPYAWNLIIDMLGKNLYFEPMWDAMKSMKKEGLLSLATFASVFSSYIVA
Sbjct: 121 RWSGRKLNDQHSPYAWNLIIDMLGKNLYFEPMWDAMKSMKKEGLLSLATFASVFSSYIVA 180

Query: 181 NCVKDAIMAFEVMDSYGCPHDVVALNSLLSAICRDGNTKDAYEFLQIAKDKIRPDPDSYA 240
           NCVKDAIM FEVMDSYGCPHDVVALNSLLSAICRDGNTKDAYEFLQIAKDKIRPDPDSYA
Sbjct: 181 NCVKDAIMTFEVMDSYGCPHDVVALNSLLSAICRDGNTKDAYEFLQIAKDKIRPDPDSYA 240

Query: 241 ILLEGWETEGNVVCSKQTFGEMVEEIGWDPTNTPAYNSFLCVLLKGPDGLHEALRFFKRL 300
           ILLEGWETEGNVVCSKQTFGEMVEEIGWDPTNTPAYNSFLCVLLKGPDGLHEALRFFKRL
Sbjct: 241 ILLEGWETEGNVVCSKQTFGEMVEEIGWDPTNTPAYNSFLCVLLKGPDGLHEALRFFKRL 300

Query: 301 KDKMCYPGFKFFKVALDECVKNGDAKAASYLWNEVLESINFQPDTHMYNSMIVICCHQND 360
           KDKMCYPGFKFFKVALDECVKNGDAKAASYLWNEVLESINFQPDTHMYNSMIVICCHQND
Sbjct: 301 KDKMCYPGFKFFKVALDECVKNGDAKAASYLWNEVLESINFQPDTHMYNSMIVICCHQND 360

Query: 361 TDAARRLLDQMICYGAFPDMETYNLLFQFLLKSRKLRDASAIFDEMIKNEFVPSRANCNA 420
           TDAARRLLDQMICYGAFPDMETYNLLFQFLLKSRKLRDASAIFDEMIKNEFVPSRANCNA
Sbjct: 361 TDAARRLLDQMICYGAFPDMETYNLLFQFLLKSRKLRDASAIFDEMIKNEFVPSRANCNA 420

Query: 421 AVRIYIESEDPNGAIKVWKCMLKSYESDLEDIGNFLIVGLRDQKRLPEAVKYAHEMIDRG 480
           AVRIYIESEDPNGAIKVWKCMLKSYESDLEDIGNFLIVGL+DQKRLPEAVKYAHEMIDRG
Sbjct: 421 AVRIYIESEDPNGAIKVWKCMLKSYESDLEDIGNFLIVGLQDQKRLPEAVKYAHEMIDRG 480

Query: 481 VMLKHSTLSKLKQSLHEVRKEFIYDELMTKLKVPE 516
           VMLKHSTLSKLKQSLHEVRKEFIYDELMTKLKVPE
Sbjct: 481 VMLKHSTLSKLKQSLHEVRKEFIYDELMTKLKVPE 515

BLAST of MS027539 vs. ExPASy TrEMBL
Match: A0A6J1HG58 (pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111463690 PE=4 SV=1)

HSP 1 Score: 883.2 bits (2281), Expect = 5.1e-253
Identity = 424/515 (82.33%), Postives = 476/515 (92.43%), Query Frame = 0

Query: 1   MGENNKRRLSDHHPQRSKKHPPSSSPSSAPSPLPSSSVSQQQFHGPSPERQRNKIPHFVS 60
           MGENNKRRLSD+  QRSKKH  SSSPSSA +P  S+S+S  +F+ PSPE  R+K PHFVS
Sbjct: 1   MGENNKRRLSDNGHQRSKKHQSSSSPSSARTPTRSTSISHARFNNPSPEPSRSKTPHFVS 60

Query: 61  YLEFPNLPFKVKLLCEIIANSPSIDVERILEDTGVQVTQEDVEEVLKLSYKFPGSSVKFF 120
           YL+FPNLPFK+KLLCEIIAN+ SID+E +LE+TGVQV++EDVE+VLKLSYKFPGSS+KFF
Sbjct: 61  YLDFPNLPFKIKLLCEIIANASSIDLEIVLEETGVQVSREDVEDVLKLSYKFPGSSMKFF 120

Query: 121 RWSGRKLNDQHSPYAWNLIIDMLGKNLYFEPMWDAMKSMKKEGLLSLATFASVFSSYIVA 180
           RWSGRKLNDQHSPYAWNLI+DMLGKNL+FEPMWDAMKSMK EGL+SLATFASVFSSYIVA
Sbjct: 121 RWSGRKLNDQHSPYAWNLIVDMLGKNLHFEPMWDAMKSMKNEGLISLATFASVFSSYIVA 180

Query: 181 NCVKDAIMAFEVMDSYGCPHDVVALNSLLSAICRDGNTKDAYEFLQIAKDKIRPDPDSYA 240
           N VKDAI++FEVMD YGCP DVVALNSLLSAICRDGNTKDA EFLQIAK KIRPDPDSYA
Sbjct: 181 NRVKDAIVSFEVMDLYGCPRDVVALNSLLSAICRDGNTKDADEFLQIAKGKIRPDPDSYA 240

Query: 241 ILLEGWETEGNVVCSKQTFGEMVEEIGWDPTNTPAYNSFLCVLLKGPDGLHEALRFFKRL 300
           I+LEGWE+EGN+VC++QTF EM+E+IGWDPTNTPAYNSFLC+LLK P+GLHEAL FFKRL
Sbjct: 241 IVLEGWESEGNIVCARQTFVEMIEQIGWDPTNTPAYNSFLCLLLKDPNGLHEALMFFKRL 300

Query: 301 KDKMCYPGFKFFKVALDECVKNGDAKAASYLWNEVLESINFQPDTHMYNSMIVICCHQND 360
           KDKMCYPGFKFFK+ALDEC KN D KA  YLWNE++ESINFQPDTHMYNSMIV+CCHQND
Sbjct: 301 KDKMCYPGFKFFKLALDECAKNRDVKAGKYLWNEIIESINFQPDTHMYNSMIVLCCHQND 360

Query: 361 TDAARRLLDQMICYGAFPDMETYNLLFQFLLKSRKLRDASAIFDEMIKNEFVPSRANCNA 420
            DAARRLLD+MI YGAFP++ETYNLLF+FLLK +KLR+AS+IFDEM+KNEFVPS ANC A
Sbjct: 361 ADAARRLLDEMISYGAFPNLETYNLLFRFLLKEKKLREASSIFDEMVKNEFVPSHANCKA 420

Query: 421 AVRIYIESEDPNGAIKVWKCMLKSYESDLEDIGNFLIVGLRDQKRLPEAVKYAHEMIDRG 480
           AVRIYIE+EDPNGAIKVWKCM+K YESDLE+IGNFLIVGL+DQ+RLPEAVKYA+EMIDRG
Sbjct: 421 AVRIYIENEDPNGAIKVWKCMVKIYESDLEEIGNFLIVGLQDQRRLPEAVKYANEMIDRG 480

Query: 481 VMLKHSTLSKLKQSLHEVRKEFIYDELMTKLKVPE 516
           ++LKHSTLSKLKQSL EVRKEF+YDELM KLK  E
Sbjct: 481 IILKHSTLSKLKQSLFEVRKEFMYDELMMKLKFSE 515

BLAST of MS027539 vs. ExPASy TrEMBL
Match: A0A6J1JKD0 (pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111487696 PE=4 SV=1)

HSP 1 Score: 874.0 bits (2257), Expect = 3.1e-250
Identity = 421/515 (81.75%), Postives = 472/515 (91.65%), Query Frame = 0

Query: 1   MGENNKRRLSDHHPQRSKKHPPSSSPSSAPSPLPSSSVSQQQFHGPSPERQRNKIPHFVS 60
           MGENNKRRLSD+  QRSKKH  SSSPSSA +P  S+S+S  +F+ PSPE  R+K PHFVS
Sbjct: 1   MGENNKRRLSDNGHQRSKKHQSSSSPSSARTPTRSTSISHPRFNNPSPEPSRSKTPHFVS 60

Query: 61  YLEFPNLPFKVKLLCEIIANSPSIDVERILEDTGVQVTQEDVEEVLKLSYKFPGSSVKFF 120
           YL+FPNLPFK+KLLCEIIAN+ SID+E +LE+TGVQV++EDVE+VLKLSYKFPGSS+KFF
Sbjct: 61  YLDFPNLPFKIKLLCEIIANASSIDLEIVLEETGVQVSREDVEDVLKLSYKFPGSSMKFF 120

Query: 121 RWSGRKLNDQHSPYAWNLIIDMLGKNLYFEPMWDAMKSMKKEGLLSLATFASVFSSYIVA 180
           RWSGRKLNDQHSPYAWNLI+D+LGKNL+FEPMWDAMKSMK EGL+SLATFASVFSSYIVA
Sbjct: 121 RWSGRKLNDQHSPYAWNLIVDILGKNLHFEPMWDAMKSMKNEGLISLATFASVFSSYIVA 180

Query: 181 NCVKDAIMAFEVMDSYGCPHDVVALNSLLSAICRDGNTKDAYEFLQIAKDKIRPDPDSYA 240
           N VKDAIM+FEVMD YGCP DVVALNSLLSAICRDGNTKDA EFLQIAK KIRPDPDSYA
Sbjct: 181 NRVKDAIMSFEVMDRYGCPRDVVALNSLLSAICRDGNTKDADEFLQIAKGKIRPDPDSYA 240

Query: 241 ILLEGWETEGNVVCSKQTFGEMVEEIGWDPTNTPAYNSFLCVLLKGPDGLHEALRFFKRL 300
           I+LEGWE+EGN+VC++QTF EM+E+IGWDPTNTPAYNSFLCVLLK P+GLHEAL  FKRL
Sbjct: 241 IVLEGWESEGNIVCARQTFVEMIEQIGWDPTNTPAYNSFLCVLLKDPNGLHEALMSFKRL 300

Query: 301 KDKMCYPGFKFFKVALDECVKNGDAKAASYLWNEVLESINFQPDTHMYNSMIVICCHQND 360
           KDKMCYPGFKFFK+ALDEC KN D KA  YLWNE++ESINFQPDTHMYNSMIV+CCHQND
Sbjct: 301 KDKMCYPGFKFFKLALDECAKNRDVKAGKYLWNEIVESINFQPDTHMYNSMIVLCCHQND 360

Query: 361 TDAARRLLDQMICYGAFPDMETYNLLFQFLLKSRKLRDASAIFDEMIKNEFVPSRANCNA 420
            DAARR+LD+MI YG FP++ETYNLLF++LLK +KLR+AS+IFDEMIKNEFVPS ANC A
Sbjct: 361 ADAARRVLDEMISYGTFPNLETYNLLFRYLLKEKKLREASSIFDEMIKNEFVPSHANCKA 420

Query: 421 AVRIYIESEDPNGAIKVWKCMLKSYESDLEDIGNFLIVGLRDQKRLPEAVKYAHEMIDRG 480
           AVRIYIE+EDPNGAIKVWKCM+K YESDLE+I NFLIVGL+DQKRLPEAVKYA+EMIDRG
Sbjct: 421 AVRIYIENEDPNGAIKVWKCMVKIYESDLEEIANFLIVGLQDQKRLPEAVKYANEMIDRG 480

Query: 481 VMLKHSTLSKLKQSLHEVRKEFIYDELMTKLKVPE 516
           ++LKHSTLSKLKQSL  VRKEF+YDELM KLK  E
Sbjct: 481 IILKHSTLSKLKQSLFVVRKEFMYDELMMKLKFTE 515

BLAST of MS027539 vs. ExPASy TrEMBL
Match: A0A0A0KTM8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G420290 PE=4 SV=1)

HSP 1 Score: 869.8 bits (2246), Expect = 5.8e-249
Identity = 421/518 (81.27%), Postives = 468/518 (90.35%), Query Frame = 0

Query: 1   MGENNKRRLSDHHPQRSKKHPPSSSPSSA-PSPLPSSSVSQQ-QFHGPSPE-RQRNKIPH 60
           MGE NKRRLSDH  QRSKKH PSSSPSSA PSP+PS+S+S Q  FH PSP    +N  PH
Sbjct: 1   MGETNKRRLSDHTHQRSKKHLPSSSPSSATPSPIPSNSLSHQTHFHNPSPHPPHKNSTPH 60

Query: 61  FVSYLEFPNLPFKVKLLCEIIANSPSIDVERILEDTGVQVTQEDVEEVLKLSYKFPGSSV 120
           F+SYL+FPNLPF++KL+CEIIANSPS+DVE+ LEDTG+  TQ+DVEEVLKLSY+FPGSSV
Sbjct: 61  FLSYLDFPNLPFQIKLMCEIIANSPSLDVEKALEDTGIHATQQDVEEVLKLSYRFPGSSV 120

Query: 121 KFFRWSGRKLNDQHSPYAWNLIIDMLGKNLYFEPMWDAMKSMKKEGLLSLATFASVFSSY 180
           KFFRWSGRKLNDQHSPYAWNLIIDMLGKNLYF+PMWDAMKSMK EGLLSLATFASVFSSY
Sbjct: 121 KFFRWSGRKLNDQHSPYAWNLIIDMLGKNLYFDPMWDAMKSMKSEGLLSLATFASVFSSY 180

Query: 181 IVANCVKDAIMAFEVMDSYGCPHDVVALNSLLSAICRDGNTKDAYEFLQIAKDKIRPDPD 240
           +VAN VKDAIMAFEVMD+YGCPHDVVA NSLLSAICRDGNTKDA EFLQIAK KIRPD D
Sbjct: 181 VVANRVKDAIMAFEVMDTYGCPHDVVAFNSLLSAICRDGNTKDADEFLQIAKRKIRPDLD 240

Query: 241 SYAILLEGWETEGNVVCSKQTFGEMVEEIGWDPTNTPAYNSFLCVLLKGPDGLHEALRFF 300
           SYAI+LEGWE+EGN VC+KQTFGEM+EEIGWDPTNTPAYNSFLCVLL+ P+GL  AL  F
Sbjct: 241 SYAIVLEGWESEGNTVCAKQTFGEMIEEIGWDPTNTPAYNSFLCVLLRDPNGLQRALVTF 300

Query: 301 KRLKDKMCYPGFKFFKVALDECVKNGDAKAASYLWNEVLESINFQPDTHMYNSMIVICCH 360
           +RLKDKMCYPGFKFFK+ALDEC+K GD K+  YLWNE+++SINFQPDT+M+NSMI +CCH
Sbjct: 301 QRLKDKMCYPGFKFFKLALDECIKCGDIKSGKYLWNEIIQSINFQPDTYMFNSMIALCCH 360

Query: 361 QNDTDAARRLLDQMICYGAFPDMETYNLLFQFLLKSRKLRDASAIFDEMIKNEFVPSRAN 420
           QNDTD ARRLLD+MIC+GAFP+ ETYNLLFQFLLK RKLRDASAIFDEMIKNEF+PS AN
Sbjct: 361 QNDTDEARRLLDEMICFGAFPNAETYNLLFQFLLKGRKLRDASAIFDEMIKNEFIPSHAN 420

Query: 421 CNAAVRIYIESEDPNGAIKVWKCMLKSYESDLEDIGNFLIVGLRDQKRLPEAVKYAHEMI 480
           CNAA+RIYIES+DPNGAIKVWKCMLK+Y+SDLE+ GNFLIV L+DQKRLPEAVKYAHEM+
Sbjct: 421 CNAAIRIYIESQDPNGAIKVWKCMLKNYDSDLEETGNFLIVRLQDQKRLPEAVKYAHEMV 480

Query: 481 DRGVMLKHSTLSKLKQSLHEVRKEFIYDELMTKLKVPE 516
           DR + LK STL+KLK SL EVRKE +YDELM KLK  E
Sbjct: 481 DRAIKLKDSTLAKLKHSLFEVRKESMYDELMVKLKCSE 518

BLAST of MS027539 vs. ExPASy TrEMBL
Match: A0A5A7V509 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G002860 PE=4 SV=1)

HSP 1 Score: 869.4 bits (2245), Expect = 7.6e-249
Identity = 422/518 (81.47%), Postives = 468/518 (90.35%), Query Frame = 0

Query: 1   MGENNKRRLSDHHPQRSKKHPPSSSPSSA-PSPLPSSSVSQQ-QFHGPSPE-RQRNKIPH 60
           MGE NKRRLSDH  QRSKKH PSSSPSSA PSP+PS+S+S Q  FH PSP+   +N  PH
Sbjct: 1   MGETNKRRLSDHTHQRSKKHLPSSSPSSATPSPIPSNSLSHQTHFHNPSPQPPHKNSTPH 60

Query: 61  FVSYLEFPNLPFKVKLLCEIIANSPSIDVERILEDTGVQVTQEDVEEVLKLSYKFPGSSV 120
           F+SYL+FPNLPFK+KL+CEIIANSPS++VE+ LEDTG+ VTQEDVEEVLKLSY FPGSSV
Sbjct: 61  FLSYLDFPNLPFKIKLMCEIIANSPSLNVEKALEDTGIHVTQEDVEEVLKLSYSFPGSSV 120

Query: 121 KFFRWSGRKLNDQHSPYAWNLIIDMLGKNLYFEPMWDAMKSMKKEGLLSLATFASVFSSY 180
           KFFRWSGRKLNDQHSPYAWNLIIDMLGKNLYF+PMWDA+KSMK EGLLSLATFASVFSSY
Sbjct: 121 KFFRWSGRKLNDQHSPYAWNLIIDMLGKNLYFDPMWDAIKSMKSEGLLSLATFASVFSSY 180

Query: 181 IVANCVKDAIMAFEVMDSYGCPHDVVALNSLLSAICRDGNTKDAYEFLQIAKDKIRPDPD 240
           +VAN VKDAIMAFEVMD+YGCPHDVVALNSLLSAICRDGNTKDA EFLQIAK KIRPDPD
Sbjct: 181 VVANRVKDAIMAFEVMDTYGCPHDVVALNSLLSAICRDGNTKDADEFLQIAKRKIRPDPD 240

Query: 241 SYAILLEGWETEGNVVCSKQTFGEMVEEIGWDPTNTPAYNSFLCVLLKGPDGLHEALRFF 300
           SYAI+LEGWE+EGN VC+KQTFGEM+EEIGWDPTNTPAYNSFLCVLL+ P+GL  AL  F
Sbjct: 241 SYAIVLEGWESEGNTVCAKQTFGEMIEEIGWDPTNTPAYNSFLCVLLRDPNGLQRALVTF 300

Query: 301 KRLKDKMCYPGFKFFKVALDECVKNGDAKAASYLWNEVLESINFQPDTHMYNSMIVICCH 360
           +RLKDKMCYPGFKFFK+ALDECVK GD KA  YLWNE+++ INFQPDT+M+NSMI +CCH
Sbjct: 301 ERLKDKMCYPGFKFFKLALDECVKCGDIKAGKYLWNEIIQCINFQPDTYMFNSMIALCCH 360

Query: 361 QNDTDAARRLLDQMICYGAFPDMETYNLLFQFLLKSRKLRDASAIFDEMIKNEFVPSRAN 420
           QNDTD ARRLLD+MICYGAFP+ ETYNLLFQFLLK RKLRDASAI DEMIKNEF+PS AN
Sbjct: 361 QNDTDEARRLLDEMICYGAFPNAETYNLLFQFLLKGRKLRDASAILDEMIKNEFIPSHAN 420

Query: 421 CNAAVRIYIESEDPNGAIKVWKCMLKSYESDLEDIGNFLIVGLRDQKRLPEAVKYAHEMI 480
           C AA+RIYIES+DPNGA+KVWKCMLK+Y+SDLE+ GNFLIV L+DQKRLPEAVKYAHEM+
Sbjct: 421 CTAAIRIYIESQDPNGALKVWKCMLKNYDSDLEETGNFLIVWLQDQKRLPEAVKYAHEMM 480

Query: 481 DRGVMLKHSTLSKLKQSLHEVRKEFIYDELMTKLKVPE 516
           DR + LK+STL+KLK SL EVRKE +YDELM K K  E
Sbjct: 481 DRPIKLKNSTLAKLKHSLFEVRKESMYDELMVKFKCSE 518

BLAST of MS027539 vs. TAIR 10
Match: AT1G77360.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 197.2 bits (500), Expect = 3.2e-50
Identity = 125/442 (28.28%), Postives = 228/442 (51.58%), Query Frame = 0

Query: 72  KLLCEIIANSPSIDVERILEDTGVQVTQEDVEEVLKLSYKFPGSSVKFFRWSGRKLNDQH 131
           K + +++ +SP + ++  L+ +G++V+QE VE+VL         + +FF+WS ++ + +H
Sbjct: 73  KNISKVLMSSPQLVLDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYRFFQWSEKQRHYEH 132

Query: 132 SPYAWNLIIDMLGKNLYFEPMWDAMKSMKKEGLLSLATFASVFSSYIVANCVKDAIMAFE 191
           S  A++++I+   K   ++ MWD + +M+K+ +L++ TF  V   Y  A  V +AI AF 
Sbjct: 133 SVRAYHMMIESTAKIRQYKLMWDLINAMRKKKMLNVETFCIVMRKYARAQKVDEAIYAFN 192

Query: 192 VMDSYGCPHDVVALNSLLSAICRDGNTKDAYEFLQIAKDKIRPDPDSYAILLEGWETEGN 251
           VM+ Y  P ++VA N LLSA+C+  N + A E  +  +D+  PD  +Y+ILLEGW  E N
Sbjct: 193 VMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEPN 252

Query: 252 VVCSKQTFGEMVEEIGWDPTNTPAYNSFLCVLLKGPDGLHEALRFFKRLKDKMCYPGFKF 311
           +  +++ F EM+ + G  P +   Y+  + +L K    + EAL   + +   +C P    
Sbjct: 253 LPKAREVFREMI-DAGCHP-DIVTYSIMVDILCKA-GRVDEALGIVRSMDPSICKPTTFI 312

Query: 312 FKVALDECVKNGDAKAASYLWNEVLESINFQPDTHMYNSMIVICCHQNDTDAARRLLDQM 371
           + V +         + A   + E +E    + D  ++NS+I   C  N      R+L +M
Sbjct: 313 YSVLVHTYGTENRLEEAVDTFLE-MERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEM 372

Query: 372 ICYGAFPDMETYNLLFQFLLKSRKLRDASAIFDEMIKNEFVPSRANCNAAVRIYIESEDP 431
              G  P+ ++ N++ + L++  +  +A  +F +MIK    P        ++++ E ++ 
Sbjct: 373 KSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIK-VCEPDADTYTMVIKMFCEKKEM 432

Query: 432 NGAIKVWKCMLKSYESDLEDIGNFLIVGLRDQKRLPEAVKYAHEMIDRGVMLKHSTLSKL 491
             A KVWK M K          + LI GL +++   +A     EMI+ G+     T  +L
Sbjct: 433 ETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRL 492

Query: 492 KQSLHEVRKEFIYDELMTKLKV 514
           +Q L +  +E +   L  K+ V
Sbjct: 493 RQLLIKEEREDVLKFLNEKMNV 509

BLAST of MS027539 vs. TAIR 10
Match: AT1G71060.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 169.1 bits (427), Expect = 9.4e-42
Identity = 120/434 (27.65%), Postives = 209/434 (48.16%), Query Frame = 0

Query: 74  LCEIIANSPSIDVERILEDTGVQVTQEDVEEVLKLSYKFPGSSVKFFRWSGRKLNDQHSP 133
           +C+I+       VE +L +  V+++   +EEVLK        ++  F+W+  +   +H+ 
Sbjct: 69  ICKILTKFTDSKVETLLNEASVKLSPALIEEVLKKLSNAGVLALSVFKWAENQKGFKHTT 128

Query: 134 YAWNLIIDMLGKNLYFEPMWDAMKSMKKEGLLSLATFASVFSSYIVANCVKDAIMAFEVM 193
             +N +I+ LGK   F+ +W  +  MK + LLS  TFA +   Y  A  VK+AI AF  M
Sbjct: 129 SNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKETFALISRRYARARKVKEAIGAFHKM 188

Query: 194 DSYGCPHDVVALNSLLSAICRDGNTKDAYE-FLQIAKDKIRPDPDSYAILLEGWETEGNV 253
           + +G   +    N +L  + +  N  DA + F ++ K +  PD  SY ILLEGW  E N+
Sbjct: 189 EEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNL 248

Query: 254 VCSKQTFGEMVEEIGWDPTNTPAYNSFLCVLLKGPDGLHEALRFFKRLKDKMCYPGFKFF 313
           +   +   EM +E G++P +  AY   +    K      EA+RFF  ++ + C P    F
Sbjct: 249 LRVDEVNREMKDE-GFEP-DVVAYGIIINAHCKAKK-YEEAIRFFNEMEQRNCKPSPHIF 308

Query: 314 KVALDECVKNGDAKAASYLWNEVLESINFQPDTHMYNSMIVICCHQNDTDAARRLLDQMI 373
              ++          A   + E  +S  F  +   YN+++   C     + A + +D+M 
Sbjct: 309 CSLINGLGSEKKLNDALEFF-ERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMR 368

Query: 374 CYGAFPDMETYNLLFQFLLKSRKLRDASAIFDEMIKNEFVPSRANCNAAVRIYIESEDPN 433
             G  P+  TY+++   L++ ++ ++A  ++  M      P+ +     VR++   E  +
Sbjct: 369 LKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLD 428

Query: 434 GAIKVWKCMLKSYESDLEDIGNFLIVGLRDQKRLPEAVKYAHEMIDRGVMLKHSTLSKLK 493
            AIK+W  M          + + LI  L  + +L EA +Y +EM+D G+       S+LK
Sbjct: 429 MAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLK 488

Query: 494 QS-LHEVRKEFIYD 506
           Q+ L E RK+ + D
Sbjct: 489 QTLLDEGRKDKVTD 495

BLAST of MS027539 vs. TAIR 10
Match: AT3G62470.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 164.9 bits (416), Expect = 1.8e-40
Identity = 115/456 (25.22%), Postives = 218/456 (47.81%), Query Frame = 0

Query: 59  VSYLEFPNLPFKVKLLCEIIANSPSID--VERILEDTGVQVTQEDVEEVLKLSYKFPGSS 118
           VS +E    P +V+ +C++I    ++D  +E +L++  + ++ + + EVL+        +
Sbjct: 119 VSCVESSTNPEEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPA 178

Query: 119 VKFFRWSGRKLNDQHSPYAWNLIIDMLGKNLYFEPMWDAMKSMKKEGLLSLATFASVFSS 178
            +FF W+  +    H    +N ++ +L K   FE M   ++ M  +GLL++ TF     +
Sbjct: 179 FRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKA 238

Query: 179 YIVANCVKDAIMAFEVMDSYGCPHDVVALNSLLSAICRDGNTKDAYEFLQIAKDKIRPDP 238
           +  A   K A+  FE+M  Y     V  +N LL ++ R    K+A       K++  P+ 
Sbjct: 239 FAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNM 298

Query: 239 DSYAILLEGWETEGNVVCSKQTFGEMVEEIGWDPTNTPAYNSFLCVLLKGPDGLHEALRF 298
            +Y +LL GW    N++ + + + +M+++ G  P +  A+N  L  LL+      +A++ 
Sbjct: 299 MTYTVLLNGWCRVRNLIEAARIWNDMIDQ-GLKP-DIVAHNVMLEGLLRSRK-KSDAIKL 358

Query: 299 FKRLKDKMCYPGFKFFKVALDECVKNGDAKAASYLWNEVLESINFQPDTHMYNSMIVICC 358
           F  +K K   P  + + + + +  K    + A   ++++++S   QPD  +Y  +I    
Sbjct: 359 FHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDS-GLQPDAAVYTCLITGFG 418

Query: 359 HQNDTDAARRLLDQMICYGAFPDMETYNLLFQFLLKSRKLRDASAIFDEMIKNEFVPSRA 418
            Q   D    LL +M   G  PD +TYN L + +   +    A+ I+++MI+NE  PS  
Sbjct: 419 TQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIH 478

Query: 419 NCNAAVRIYIESEDPNGAIKVWKCMLKSYESDLEDIGNFLIVGLRDQKRLPEAVKYAHEM 478
             N  ++ Y  + +      VW+ M+K      ++    LI GL  + +  EA +Y  EM
Sbjct: 479 TFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEM 538

Query: 479 IDRGVMLKHSTLSKLKQSLHEVRKEFIYDELMTKLK 513
           +D+G+       +K     H   +  I++EL  + K
Sbjct: 539 LDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAK 570

BLAST of MS027539 vs. TAIR 10
Match: AT3G62540.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 162.5 bits (410), Expect = 8.8e-40
Identity = 114/456 (25.00%), Postives = 216/456 (47.37%), Query Frame = 0

Query: 59  VSYLEFPNLPFKVKLLCEIIANSPSID--VERILEDTGVQVTQEDVEEVLKLSYKFPGSS 118
           VS +E    P +V+ +C++I    ++D  +E +L++  + ++ + + EVL+        +
Sbjct: 119 VSCVESSTNPEEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPA 178

Query: 119 VKFFRWSGRKLNDQHSPYAWNLIIDMLGKNLYFEPMWDAMKSMKKEGLLSLATFASVFSS 178
            +FF W+  +    H+   +N ++ +L K   FE M   ++ M  +GLL++ TF     +
Sbjct: 179 FRFFCWAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKA 238

Query: 179 YIVANCVKDAIMAFEVMDSYGCPHDVVALNSLLSAICRDGNTKDAYEFLQIAKDKIRPDP 238
           +  A   K A+  FE+M  Y     V  +N LL ++ R    K+A       K++  P+ 
Sbjct: 239 FAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNM 298

Query: 239 DSYAILLEGWETEGNVVCSKQTFGEMVEEIGWDPTNTPAYNSFLCVLLKGPDGLHEALRF 298
            +Y +LL GW    N++ + + + +M++  G  P +  A+N  L  LL+      +A++ 
Sbjct: 299 MTYTVLLNGWCRVRNLIEAARIWNDMIDH-GLKP-DIVAHNVMLEGLLRSMK-KSDAIKL 358

Query: 299 FKRLKDKMCYPGFKFFKVALDECVKNGDAKAASYLWNEVLESINFQPDTHMYNSMIVICC 358
           F  +K K   P  + + + + +  K    + A   ++++++S   QPD  +Y  +I    
Sbjct: 359 FHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDS-GLQPDAAVYTCLITGFG 418

Query: 359 HQNDTDAARRLLDQMICYGAFPDMETYNLLFQFLLKSRKLRDASAIFDEMIKNEFVPSRA 418
            Q   D    LL +M   G  PD +TYN L + +   +     + I+++MI+NE  PS  
Sbjct: 419 TQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIH 478

Query: 419 NCNAAVRIYIESEDPNGAIKVWKCMLKSYESDLEDIGNFLIVGLRDQKRLPEAVKYAHEM 478
             N  ++ Y  + +      VW  M+K      ++    LI GL  + +  EA +Y  EM
Sbjct: 479 TFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEM 538

Query: 479 IDRGVMLKHSTLSKLKQSLHEVRKEFIYDELMTKLK 513
           +D+G+       +K     H   +  I++EL  + K
Sbjct: 539 LDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAK 570

BLAST of MS027539 vs. TAIR 10
Match: AT5G14820.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 162.2 bits (409), Expect = 1.1e-39
Identity = 114/456 (25.00%), Postives = 215/456 (47.15%), Query Frame = 0

Query: 59  VSYLEFPNLPFKVKLLCEIIANSPSID--VERILEDTGVQVTQEDVEEVLKLSYKFPGSS 118
           VS +E    P +V+ +C++I    ++D  +E +L++  + ++ + + EVL+        +
Sbjct: 118 VSCVESSTNPEEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPA 177

Query: 119 VKFFRWSGRKLNDQHSPYAWNLIIDMLGKNLYFEPMWDAMKSMKKEGLLSLATFASVFSS 178
            +FF W+  +    H    +N ++ +L K   FE M   ++ M  +GLL++ TF     +
Sbjct: 178 FRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKA 237

Query: 179 YIVANCVKDAIMAFEVMDSYGCPHDVVALNSLLSAICRDGNTKDAYEFLQIAKDKIRPDP 238
           +  A   K A+  FE+M  Y     V  +N LL ++ R    K+A       K++  P+ 
Sbjct: 238 FAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNM 297

Query: 239 DSYAILLEGWETEGNVVCSKQTFGEMVEEIGWDPTNTPAYNSFLCVLLKGPDGLHEALRF 298
            +Y +LL GW    N++ + + + +M++  G  P +  A+N  L  LL+      +A++ 
Sbjct: 298 MTYTVLLNGWCRVRNLIEAARIWNDMIDH-GLKP-DIVAHNVMLEGLLRSMK-KSDAIKL 357

Query: 299 FKRLKDKMCYPGFKFFKVALDECVKNGDAKAASYLWNEVLESINFQPDTHMYNSMIVICC 358
           F  +K K   P  + + + + +  K    + A   ++++++S   QPD  +Y  +I    
Sbjct: 358 FHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDS-GLQPDAAVYTCLITGFG 417

Query: 359 HQNDTDAARRLLDQMICYGAFPDMETYNLLFQFLLKSRKLRDASAIFDEMIKNEFVPSRA 418
            Q   D    LL +M   G  PD +TYN L + +   +     + I+++MI+NE  PS  
Sbjct: 418 TQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIH 477

Query: 419 NCNAAVRIYIESEDPNGAIKVWKCMLKSYESDLEDIGNFLIVGLRDQKRLPEAVKYAHEM 478
             N  ++ Y  + +      VW  M+K      ++    LI GL  + +  EA +Y  EM
Sbjct: 478 TFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEM 537

Query: 479 IDRGVMLKHSTLSKLKQSLHEVRKEFIYDELMTKLK 513
           +D+G+       +K     H   +  I++EL  + K
Sbjct: 538 LDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAK 569

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022141574.17.1e-30299.61pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like [Momor... [more]
XP_038906581.12.7e-25684.38pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like [Benin... [more]
XP_022963446.11.0e-25282.33pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like [Cucur... [more]
XP_023511926.13.4e-25182.14pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like [Cucur... [more]
XP_022990962.16.3e-25081.75pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like [Cucur... [more]
Match NameE-valueIdentityDescription
Q9FVX24.5e-4928.28Pentatricopeptide repeat-containing protein At1g77360, mitochondrial OS=Arabidop... [more]
Q9C9A21.3e-4027.65Pentatricopeptide repeat-containing protein At1g71060, mitochondrial OS=Arabidop... [more]
Q9LZP32.5e-3925.22Pentatricopeptide repeat-containing protein At3g62470, mitochondrial OS=Arabidop... [more]
Q3EAF81.2e-3825.00Pentatricopeptide repeat-containing protein At3g62540, mitochondrial OS=Arabidop... [more]
Q9LEQ71.6e-3825.00Pentatricopeptide repeat-containing protein At5g14820, mitochondrial OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A6J1CJ173.5e-30299.61pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like OS=Mom... [more]
A0A6J1HG585.1e-25382.33pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like OS=Cuc... [more]
A0A6J1JKD03.1e-25081.75pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like OS=Cuc... [more]
A0A0A0KTM85.8e-24981.27Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G420290 PE=4 SV=1[more]
A0A5A7V5097.6e-24981.47Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
Match NameE-valueIdentityDescription
AT1G77360.13.2e-5028.28Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G71060.19.4e-4227.65Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G62470.11.8e-4025.22Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G62540.18.8e-4025.00Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G14820.11.1e-3925.00Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 135..164
e-value: 0.27
score: 11.6
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 343..389
e-value: 1.1E-9
score: 38.4
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 382..414
e-value: 1.6E-5
score: 22.8
coord: 347..379
e-value: 2.1E-6
score: 25.6
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 193..244
e-value: 0.0014
score: 18.7
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 379..413
score: 10.785976
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 344..378
score: 10.698286
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 112..308
e-value: 2.6E-20
score: 75.0
coord: 309..512
e-value: 3.0E-31
score: 111.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..52
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 20..48
NoneNo IPR availablePANTHERPTHR46128:SF190SUBFAMILY NOT NAMEDcoord: 4..506
NoneNo IPR availablePANTHERPTHR46128MITOCHONDRIAL GROUP I INTRON SPLICING FACTOR CCM1coord: 4..506

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS027539.1MS027539.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding