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MS027293 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAATGGCTATGGCTATCGCTGCTGCTCTTGATTCTCTAAAAATGTCCGGTAATCTTCATTCTTTGATAGTAGGCTACAATTTCAAGCCTTCGAATCAAAATCTGCTAGAGGATTATCTCTTTAATAAGATCCACGGGTACGAATATGTTCAAGATACTGTATTCGATTGTGATCTCTACGGCCACAAGGAACCTTGGGAAATTTGGGAATCTTTTGGCGGTGTCGACGACGAAGATCTTTATTTCTTCACTAAGCTGAAGAGGTCGACAAACAATTCTGGACAATTGTCAGCTCATATCACTCGAAAGATTGGCTTGGCCGGTGGCAGTTGGAGCGGCGAGAATTCGCCCGACCCTATTTTTTCAACTAAATACCAAAGAGATTTTGGTTATTGCAAGCGCTTCAGGTATATGACCTTCTTACAACCTACATTATTATTCTTTAAATTTTTTTTATTTTATCTTAAGTTATAAATTTTAATGGCAATTCAAGATAATATGGGACCAAAGGCCAATTTTTCTTTCTATAAAAAACATTAATGTAATTAAGTCAAATATATATTTTAGTTTGACAAGGGACACTTTAATTTCGAAAAGGGGTCCTAAGTTTAATTTTGAGAATGATTCCAAATATTATTAAATATAATATTTTATTTCTATGAATAATTGTGTTTCATGGCCGCGACATGCGTCGAAGAATAAACCGAGGGCATCAAATCTAAGGGAAGAGAAAATAAAATCTGAAAAAAAAAAAAAAAACCTAAAATGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATATATATTGCCTCTGTTTTAACTCTTTTTCTTCACTAAACTTATTATATTTGTGTGTGGATACATAATTTTATTCATTATATTCGATTTATTGTTGCATTTTTTTGATGAATTTTTAAAATACCGTAAATTTGAAAGTTAAATAATGGATTTTGATCATTGTTATTTAGTGAAATTTTATGAATTCAAAATAAATTATATATTTGATTAATTTCAGGTACGAGAATGATCGACTGCCAGAACACCATGCTGAATGGATCATGCACGAATTTAGCTTGTCTGAGGATTGCATACTTGAAGGTGCAGATCCTAATTATGTTTTATGCCGGATTAGAAAGAACGAAAGACTTAACAAGAAAGGAAAGAAAAGATGTCATTCTGAGACGTTGCAACCTGTTGAACAAACAGTCACGGCACTCAAGACGAAATGCAAGTTGCCTTGCAGGCGAAATATAACTGCCAACCAAGGTACTAAGGATGTGCCTTGGATTCCTGAGATGACCACCAATCAAGGTACAAGCGATGTGCCTTCAATTCCTAAGATTACAACCACCGACCAAGATACTAGTGATGTCTTTTGGGTGCCTGAGACAACCACCCATGAAAGCATGAGTGATGTGTTTGACTTGCCTGCCATGCCCACTACTCATGATACTAGTAGCGTACCTTGTTTGCTTGATATGACTACCAACGAAGGTACTAGCAACGACATGTCCTACTTACTTGAGATGACCACTGATAAGGATGTTAGTGATGCATTTTTCTTGCATGAGACGGGCACCTATAAGGACATGAGTGATGTGTTTGACTTGCCTGCTGTGCCCACTACTCATGATATTAGTAGCGTGTCTTGCTTGCTTGATATGATTACCAACGAAGGTACTAGCAACGACATGTCCTACTTACTTGAGATGACCACCGATAAGGATGTTAGTGATGCATTTTTCTTGCATGAGACGGGCACCTATGAGGACATGAGTGATGTGTTTGACTTGCCTGCTATGCCCATTACTCATGATACTAGTGACGTGCCTTACATGCCTACAAATACCACCAACGAGGGTACTAGTAACGTGTCTTGTTTGCCTAATATGACTACCAACGGAGGTACTAGCGACATGTCTTGCTTACTTGAGATGACCACCAATGAGGGTGCTAGTGATGTGTTTTATGTGTCTGATACAACCACCAACCAAGGAGCCAATAACACGTCTGAGAAAATTGCTGATAAAGAAACCGTTCTCGAGAAATGGAAAGCTCATTTAAATATTGACAGCTTAGATGATTTAGTTGATTTTTAG ATGGCAATGGCTATGGCTATCGCTGCTGCTCTTGATTCTCTAAAAATGTCCGGTAATCTTCATTCTTTGATAGTAGGCTACAATTTCAAGCCTTCGAATCAAAATCTGCTAGAGGATTATCTCTTTAATAAGATCCACGGGTACGAATATGTTCAAGATACTGTATTCGATTGTGATCTCTACGGCCACAAGGAACCTTGGGAAATTTGGGAATCTTTTGGCGGTGTCGACGACGAAGATCTTTATTTCTTCACTAAGCTGAAGAGGTCGACAAACAATTCTGGACAATTGTCAGCTCATATCACTCGAAAGATTGGCTTGGCCGGTGGCAGTTGGAGCGGCGAGAATTCGCCCGACCCTATTTTTTCAACTAAATACCAAAGAGATTTTGGTTATTGCAAGCGCTTCAGGTACGAGAATGATCGACTGCCAGAACACCATGCTGAATGGATCATGCACGAATTTAGCTTGTCTGAGGATTGCATACTTGAAGGTGCAGATCCTAATTATGTTTTATGCCGGATTAGAAAGAACGAAAGACTTAACAAGAAAGGAAAGAAAAGATGTCATTCTGAGACGTTGCAACCTGTTGAACAAACAGTCACGGCACTCAAGACGAAATGCAAGTTGCCTTGCAGGCGAAATATAACTGCCAACCAAGGTACTAAGGATGTGCCTTGGATTCCTGAGATGACCACCAATCAAGGTACAAGCGATGTGCCTTCAATTCCTAAGATTACAACCACCGACCAAGATACTAGTGATGTCTTTTGGGTGCCTGAGACAACCACCCATGAAAGCATGAGTGATGTGTTTGACTTGCCTGCCATGCCCACTACTCATGATACTAGTAGCGTACCTTGTTTGCTTGATATGACTACCAACGAAGGTACTAGCAACGACATGTCCTACTTACTTGAGATGACCACTGATAAGGATGTTAGTGATGCATTTTTCTTGCATGAGACGGGCACCTATAAGGACATGAGTGATGTGTTTGACTTGCCTGCTGTGCCCACTACTCATGATATTAGTAGCGTGTCTTGCTTGCTTGATATGATTACCAACGAAGGTACTAGCAACGACATGTCCTACTTACTTGAGATGACCACCGATAAGGATGTTAGTGATGCATTTTTCTTGCATGAGACGGGCACCTATGAGGACATGAGTGATGTGTTTGACTTGCCTGCTATGCCCATTACTCATGATACTAGTGACGTGCCTTACATGCCTACAAATACCACCAACGAGGGTACTAGTAACGTGTCTTGTTTGCCTAATATGACTACCAACGGAGGTACTAGCGACATGTCTTGCTTACTTGAGATGACCACCAATGAGGGTGCTAGTGATGTGTTTTATGTGTCTGATACAACCACCAACCAAGGAGCCAATAACACGTCTGAGAAAATTGCTGATAAAGAAACCGTTCTCGAGAAATGGAAAGCTCATTTAAATATTGACAGCTTAGATGATTTAGTTGATTTTTAG ATGGCAATGGCTATGGCTATCGCTGCTGCTCTTGATTCTCTAAAAATGTCCGGTAATCTTCATTCTTTGATAGTAGGCTACAATTTCAAGCCTTCGAATCAAAATCTGCTAGAGGATTATCTCTTTAATAAGATCCACGGGTACGAATATGTTCAAGATACTGTATTCGATTGTGATCTCTACGGCCACAAGGAACCTTGGGAAATTTGGGAATCTTTTGGCGGTGTCGACGACGAAGATCTTTATTTCTTCACTAAGCTGAAGAGGTCGACAAACAATTCTGGACAATTGTCAGCTCATATCACTCGAAAGATTGGCTTGGCCGGTGGCAGTTGGAGCGGCGAGAATTCGCCCGACCCTATTTTTTCAACTAAATACCAAAGAGATTTTGGTTATTGCAAGCGCTTCAGGTACGAGAATGATCGACTGCCAGAACACCATGCTGAATGGATCATGCACGAATTTAGCTTGTCTGAGGATTGCATACTTGAAGGTGCAGATCCTAATTATGTTTTATGCCGGATTAGAAAGAACGAAAGACTTAACAAGAAAGGAAAGAAAAGATGTCATTCTGAGACGTTGCAACCTGTTGAACAAACAGTCACGGCACTCAAGACGAAATGCAAGTTGCCTTGCAGGCGAAATATAACTGCCAACCAAGGTACTAAGGATGTGCCTTGGATTCCTGAGATGACCACCAATCAAGGTACAAGCGATGTGCCTTCAATTCCTAAGATTACAACCACCGACCAAGATACTAGTGATGTCTTTTGGGTGCCTGAGACAACCACCCATGAAAGCATGAGTGATGTGTTTGACTTGCCTGCCATGCCCACTACTCATGATACTAGTAGCGTACCTTGTTTGCTTGATATGACTACCAACGAAGGTACTAGCAACGACATGTCCTACTTACTTGAGATGACCACTGATAAGGATGTTAGTGATGCATTTTTCTTGCATGAGACGGGCACCTATAAGGACATGAGTGATGTGTTTGACTTGCCTGCTGTGCCCACTACTCATGATATTAGTAGCGTGTCTTGCTTGCTTGATATGATTACCAACGAAGGTACTAGCAACGACATGTCCTACTTACTTGAGATGACCACCGATAAGGATGTTAGTGATGCATTTTTCTTGCATGAGACGGGCACCTATGAGGACATGAGTGATGTGTTTGACTTGCCTGCTATGCCCATTACTCATGATACTAGTGACGTGCCTTACATGCCTACAAATACCACCAACGAGGGTACTAGTAACGTGTCTTGTTTGCCTAATATGACTACCAACGGAGGTACTAGCGACATGTCTTGCTTACTTGAGATGACCACCAATGAGGGTGCTAGTGATGTGTTTTATGTGTCTGATACAACCACCAACCAAGGAGCCAATAACACGTCTGAGAAAATTGCTGATAAAGAAACCGTTCTCGAGAAATGGAAAGCTCATTTAAATATTGACAGCTTAGATGATTTAGTTGATTTTTAG MAMAMAIAAALDSLKMSGNLHSLIVGYNFKPSNQNLLEDYLFNKIHGYEYVQDTVFDCDLYGHKEPWEIWESFGGVDDEDLYFFTKLKRSTNNSGQLSAHITRKIGLAGGSWSGENSPDPIFSTKYQRDFGYCKRFRYENDRLPEHHAEWIMHEFSLSEDCILEGADPNYVLCRIRKNERLNKKGKKRCHSETLQPVEQTVTALKTKCKLPCRRNITANQGTKDVPWIPEMTTNQGTSDVPSIPKITTTDQDTSDVFWVPETTTHESMSDVFDLPAMPTTHDTSSVPCLLDMTTNEGTSNDMSYLLEMTTDKDVSDAFFLHETGTYKDMSDVFDLPAVPTTHDISSVSCLLDMITNEGTSNDMSYLLEMTTDKDVSDAFFLHETGTYEDMSDVFDLPAMPITHDTSDVPYMPTNTTNEGTSNVSCLPNMTTNGGTSDMSCLLEMTTNEGASDVFYVSDTTTNQGANNTSEKIADKETVLEKWKAHLNIDSLDDLVDF Homology
BLAST of MS027293 vs. NCBI nr
Match: XP_022145828.1 (protein BEARSKIN2-like [Momordica charantia]) HSP 1 Score: 370.2 bits (949), Expect = 2.9e-98 Identity = 195/305 (63.93%), Postives = 220/305 (72.13%), Query Frame = 0
BLAST of MS027293 vs. NCBI nr
Match: KAG6571625.1 (NAC domain-containing protein JA2L, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 230.7 bits (587), Expect = 2.7e-56 Identity = 112/181 (61.88%), Postives = 133/181 (73.48%), Query Frame = 0
BLAST of MS027293 vs. NCBI nr
Match: XP_023511535.1 (NAC transcription factor 25-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 230.3 bits (586), Expect = 3.5e-56 Identity = 111/179 (62.01%), Postives = 131/179 (73.18%), Query Frame = 0
BLAST of MS027293 vs. NCBI nr
Match: XP_023511534.1 (NAC domain-containing protein 72-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 229.2 bits (583), Expect = 7.9e-56 Identity = 110/179 (61.45%), Postives = 130/179 (72.63%), Query Frame = 0
BLAST of MS027293 vs. NCBI nr
Match: XP_022963781.1 (NAC domain-containing protein 30-like [Cucurbita moschata]) HSP 1 Score: 228.8 bits (582), Expect = 1.0e-55 Identity = 110/179 (61.45%), Postives = 128/179 (71.51%), Query Frame = 0
BLAST of MS027293 vs. ExPASy Swiss-Prot
Match: Q84K00 (NAC domain-containing protein 78 OS=Arabidopsis thaliana OX=3702 GN=NAC078 PE=2 SV=2) HSP 1 Score: 61.2 bits (147), Expect = 3.7e-08 Identity = 48/163 (29.45%), Postives = 73/163 (44.79%), Query Frame = 0
BLAST of MS027293 vs. ExPASy Swiss-Prot
Match: Q9LS24 (NAC domain-containing protein 96 OS=Arabidopsis thaliana OX=3702 GN=NAC096 PE=1 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 6.4e-08 Identity = 55/195 (28.21%), Postives = 88/195 (45.13%), Query Frame = 0
BLAST of MS027293 vs. ExPASy Swiss-Prot
Match: Q9C932 (NAC domain-containing protein 19 OS=Arabidopsis thaliana OX=3702 GN=NAC019 PE=1 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 1.1e-07 Identity = 50/168 (29.76%), Postives = 78/168 (46.43%), Query Frame = 0
BLAST of MS027293 vs. ExPASy Swiss-Prot
Match: A0A3Q7HH64 (NAC domain-containing protein JA2L OS=Solanum lycopersicum OX=4081 GN=JA2L PE=2 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 1.4e-07 Identity = 50/174 (28.74%), Postives = 80/174 (45.98%), Query Frame = 0
BLAST of MS027293 vs. ExPASy Swiss-Prot
Match: O49697 (NAC domain-containing protein 71 OS=Arabidopsis thaliana OX=3702 GN=NAC071 PE=2 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 2.4e-07 Identity = 58/219 (26.48%), Postives = 85/219 (38.81%), Query Frame = 0
BLAST of MS027293 vs. ExPASy TrEMBL
Match: A0A6J1CX07 (protein BEARSKIN2-like OS=Momordica charantia OX=3673 GN=LOC111015190 PE=4 SV=1) HSP 1 Score: 370.2 bits (949), Expect = 1.4e-98 Identity = 195/305 (63.93%), Postives = 220/305 (72.13%), Query Frame = 0
BLAST of MS027293 vs. ExPASy TrEMBL
Match: A0A6J1HH13 (NAC domain-containing protein 30-like OS=Cucurbita moschata OX=3662 GN=LOC111463973 PE=4 SV=1) HSP 1 Score: 228.8 bits (582), Expect = 5.0e-56 Identity = 110/179 (61.45%), Postives = 128/179 (71.51%), Query Frame = 0
BLAST of MS027293 vs. ExPASy TrEMBL
Match: A0A0A0KXM1 (NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G296900 PE=4 SV=1) HSP 1 Score: 227.3 bits (578), Expect = 1.5e-55 Identity = 123/244 (50.41%), Postives = 147/244 (60.25%), Query Frame = 0
BLAST of MS027293 vs. ExPASy TrEMBL
Match: A0A6J1HSR6 (NAC domain-containing protein 72-like OS=Cucurbita maxima OX=3661 GN=LOC111467095 PE=4 SV=1) HSP 1 Score: 222.2 bits (565), Expect = 4.7e-54 Identity = 107/166 (64.46%), Postives = 124/166 (74.70%), Query Frame = 0
BLAST of MS027293 vs. ExPASy TrEMBL
Match: A0A5D3BNU6 (Protein SOMBRERO-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1545G00160 PE=4 SV=1) HSP 1 Score: 221.9 bits (564), Expect = 6.1e-54 Identity = 125/246 (50.81%), Postives = 156/246 (63.41%), Query Frame = 0
BLAST of MS027293 vs. TAIR 10
Match: AT3G17730.1 (NAC domain containing protein 57 ) HSP 1 Score: 63.9 bits (154), Expect = 4.1e-10 Identity = 51/156 (32.69%), Postives = 71/156 (45.51%), Query Frame = 0
BLAST of MS027293 vs. TAIR 10
Match: AT5G04410.1 (NAC domain containing protein 2 ) HSP 1 Score: 61.2 bits (147), Expect = 2.7e-09 Identity = 48/163 (29.45%), Postives = 73/163 (44.79%), Query Frame = 0
BLAST of MS027293 vs. TAIR 10
Match: AT5G46590.1 (NAC domain containing protein 96 ) HSP 1 Score: 60.5 bits (145), Expect = 4.5e-09 Identity = 55/195 (28.21%), Postives = 88/195 (45.13%), Query Frame = 0
BLAST of MS027293 vs. TAIR 10
Match: AT1G52890.1 (NAC domain containing protein 19 ) HSP 1 Score: 59.7 bits (143), Expect = 7.7e-09 Identity = 50/168 (29.76%), Postives = 78/168 (46.43%), Query Frame = 0
BLAST of MS027293 vs. TAIR 10
Match: AT4G17980.1 (NAC domain containing protein 71 ) HSP 1 Score: 58.5 bits (140), Expect = 1.7e-08 Identity = 58/219 (26.48%), Postives = 85/219 (38.81%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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