MS026755 (gene) Bitter gourd (TR) v1

Overview


Name	MS026755
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Unknown protein
Location	scaffold424: 189678 .. 190781 (+)
RNA-Seq Expression	MS026755
Synteny	MS026755

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGTCGTGCGATGGTAAGGAGAAGGACTCGTCCCATATGCAGGTTTTTTAGGAGGATGAGTTGCTCCCTAAGGAGGCTAGGGCTGCACGTATCATGGTTGGAGAATTAGTTTGGCCTTTAGGGGGGTACGGAGCCCTTCCATCCACCCTTGTTTGTTTTCCTCTTCTTTTTTTTTTGTAATCGGCGTGCACCGCTGTCTATCGTGCCACCACGCACCATGCTTCTAACCCCTTTTCTTAACAAATAAAGAGAAGTTTTGTTTTCCGTATACTCAATGTTTTATCTCTTGGGTTTCATCCTAATCCTGGCAGTTTTTGTGTTATACTCGCTATTCACATGTCGCGATGAGCGGGGCGAGTTCGCACATGCACGTGCGAGACATGCCTTCGAAGCGTCACTGGGTTACGTCTCTTCAGGTTTGCCCCTGGGATCGAACGCTCTGAACAACATGGAAAATGTGTCCAAGTTGTCTTTTTCGCTTCTCTTCCTCTGTTGTTGCTTCGTTTCTAGCAACTACAGTTAATGCTAATAGTAAATATCATAATTGCGATCATCCTCCTCTTTGTTGGTAAGTGGAGGTTCGATCTATAAAAGGATCCATTCCCCTCTTGATACTTCTCGCCTTTAAGGATGGGAAGGAAGAGGAAGTGTCCCCTTGTTGACGATGTCCCACGTGACGCCAATGATTTTCCTCTCGGAGAAGATGAGCTCACTATGGAAATGATGCGGTTGCGACGCGCTTTGACTGACATGAAGAGTTATGCGCGCAATCAGACTGATCAAGCTTAGTACTTCTACAAGGCCAATGTCATCCTTGACATGTAAAAGACGGAGTTGGAGATGGAGGTTGAGGTTCTCCGCTCCCAGAATGAGGCACTTCGGGAGCGCGTTTTGACTCTGGAGCACACATTCTTTATCAGCACTAGAGTCGTGACGACGCGGCGGCCGACTAGTGGAGAAGGAGCAGGCATCACCGATCCAAGAAAGCGTCCGGCTTGGTTGGGGGGACGGTCCCCTCGTCCGAGGCCGTTGTTTTTTTCGAAAGGCGGTTCCCATTCATTCCACTGTCCATGGTGCTCAGCCGTCTTTAGGGAGGAATAA

mRNA sequence

ATGCAGTCGTGCGATGGTAAGGAGAAGGACTCGTCCCATATGCAGTTTTTGTGTTATACTCGCTATTCACATGTCGCGATGAGCGGGGCGAGTTCGCACATGCACGTGCGAGACATGCCTTCGAAGCGTCACTGGGTTACGTCTCTTCAGACGGAGTTGGAGATGGAGGTTGAGGTTCTCCGCTCCCAGAATGAGGCACTTCGGGAGCGCGTTTTGACTCTGGAGCACACATTCTTTATCAGCACTAGAGTCGTGACGACGCGGCGGCCGACTAGTGGAGAAGGAGCAGGCATCACCGATCCAAGAAAGCGTCCGGCTTGGTTGGGGGGACGGTCCCCTCGTCCGAGGCCGTTGTTTTTTTCGAAAGGCGGTTCCCATTCATTCCACTGTCCATGGTGCTCAGCCGTCTTTAGGGAGGAATAA

Coding sequence (CDS)

ATGCAGTCGTGCGATGGTAAGGAGAAGGACTCGTCCCATATGCAGTTTTTGTGTTATACTCGCTATTCACATGTCGCGATGAGCGGGGCGAGTTCGCACATGCACGTGCGAGACATGCCTTCGAAGCGTCACTGGGTTACGTCTCTTCAGACGGAGTTGGAGATGGAGGTTGAGGTTCTCCGCTCCCAGAATGAGGCACTTCGGGAGCGCGTTTTGACTCTGGAGCACACATTCTTTATCAGCACTAGAGTCGTGACGACGCGGCGGCCGACTAGTGGAGAAGGAGCAGGCATCACCGATCCAAGAAAGCGTCCGGCTTGGTTGGGGGGACGGTCCCCTCGTCCGAGGCCGTTGTTTTTTTCGAAAGGCGGTTCCCATTCATTCCACTGTCCATGGTGCTCAGCCGTCTTTAGGGAGGAATAA

Protein sequence

MQSCDGKEKDSSHMQFLCYTRYSHVAMSGASSHMHVRDMPSKRHWVTSLQTELEMEVEVLRSQNEALRERVLTLEHTFFISTRVVTTRRPTSGEGAGITDPRKRPAWLGGRSPRPRPLFFSKGGSHSFHCPWCSAVFREE

Homology

The following BLAST results are available for this feature:

BLAST of MS026755 vs.


Match Name	E-value	Identity	Description

BLAST of MS026755 vs.


Match Name	E-value	Identity	Description

BLAST of MS026755 vs.


Match Name	E-value	Identity	Description

BLAST of MS026755 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 50..77
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..108
None	No IPR available	CDD	cd14686	bZIP	coord: 52..75 e-value: 0.00665518 score: 30.9765

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS026755.1	MS026755.1	mRNA