MS026398 (gene) Bitter gourd (TR) v1

Overview
NameMS026398
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptiontranscription termination factor MTERF15, mitochondrial
Locationscaffold402: 963716 .. 965053 (+)
RNA-Seq ExpressionMS026398
SyntenyMS026398
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCATGGAAAGAGCCGAGGTTGGTCACTTATGAAACAGAGAACATTGAGAAGAAGATTGACTTCTTGATCCATAAGATGAAATTTGGTGTTGAATGTTTGATTGATGTTCCAGAATATTTGGGCATCAATTTCGAAAAGCAGATTGTTCCTCGTTACAATGTGATTGAATATTTGGGATCAAAAGGCTGGCTTGGTTCTCAGGTTGGTTTGAGAGAAATTATCAAGCCTAGCAGGCTCAAGTTCTACAATCTGTTTGTAAAGCCTTATCCAGAGTGTGGGAAGATGTTCTGGAAATTCGTGGGAGATAATGAAACGAAGAGCTCGAGTAGGCATCCTATTGGATTATGGAAGGTTTTCAAACCACAAAGACATCCAGAATTAAGAGAAGATACTGAGAACATGAAGTCATTCATGAATTCTCTTGTTAAGTGGAAGCTTGGTAAGATGGAGAAGGGGTCCTCTGGTTATGGGAAGGCAGTGAGGTAAACAGGTATGCCATATTTGAATGACGGGCCCTACAGCGAATGAGTAGGTTCTTGTTGAAAATTTGCACGATATAAACTCAGTAATACCGTGCAAACTAACCTAATAATCCAGGGTGGAAGGAGCAGCAGAAGAACCTACTGGACACAACTGACTGGTGACTGTAATTGCCGGAGGCCTCTTGTTCTGAAGAAAATGATGGACTCATAAACTTTGGTTTTGTTAAGCTATCCATTAATGGATGAAAACTCAGTCGAATTTTCTCAAACCGATGGCTCCGTCACAATTTAGTTCTTGTTGGATTTGAAAGAATGTGGCTGGAATGGATGTTCTCAAACCTGGTTAGTGAAACTGGCTCCTAGAATGCTTATTGTTGTCTTATAAGCTGTTTGAATTGCATGCTGTGAATCCAATTGTTGAAACGTGGTATATAAAAGTATCCATTTTCGTTGAAGATCCATTATTTTGATAAAAGTTAGAAAAACTTTTGATTATTGACATTATGAGTTCATGCCTTTGCTACCAACCATAATGTTCTTTTGTTTCTGTTTGTGAAAGCCTTACTTTTATTTATATATATATATGTTCAATCAAACTCTGGTGTTGTTGGGAATGTCAAACTGTAAAGACTTGTTTATTTCAACATAAACAAACTATAAACTAATACCATGATTTTATTGCAGATGTGTCTCAGTTCCCTCTCCTTACTTAGTCTTGGCGGGGTGTAAGAAGGTCGATTTGACTCGTTTCTTAAAGCCAAAAATGATACTGAATCGACATAATCTTCGCAAAATGCAAGAAAAGCGCCCAGCAAATTGTGATTGCCTGACCATGCCAGGTCCAATGAGCTAG

mRNA sequence

ATGCCATGGAAAGAGCCGAGGTTGGTCACTTATGAAACAGAGAACATTGAGAAGAAGATTGACTTCTTGATCCATAAGATGAAATTTGGTGTTGAATGTTTGATTGATGTTCCAGAATATTTGGGCATCAATTTCGAAAAGCAGATTGTTCCTCGTTACAATGTGATTGAATATTTGGGATCAAAAGGCTGGCTTGGTTCTCAGGTTGGTTTGAGAGAAATTATCAAGCCTAGCAGGCTCAAGTTCTACAATCTGTTTGTAAAGCCTTATCCAGAGTGTGGGAAGATGTTCTGGAAATTCGTGGGAGATAATGAAACGAAGAGCTCGAGTAGGCATCCTATTGGATTATGGAAGGTTTTCAAACCACAAAGACATCCAGAATTAAGAGAAGATACTGAGAACATGAAGTCATTCATGAATTCTCTTGTTAAGTGGAAGCTTGGTAAGATGGAGAAGGGGTCCTCTGGTTATGGGAAGGCAGTGAGATGTGTCTCAGTTCCCTCTCCTTACTTAGTCTTGGCGGGGTGTAAGAAGGTCGATTTGACTCGTTTCTTAAAGCCAAAAATGATACTGAATCGACATAATCTTCGCAAAATGCAAGAAAAGCGCCCAGCAAATTGTGATTGCCTGACCATGCCAGGTCCAATGAGCTAG

Coding sequence (CDS)

ATGCCATGGAAAGAGCCGAGGTTGGTCACTTATGAAACAGAGAACATTGAGAAGAAGATTGACTTCTTGATCCATAAGATGAAATTTGGTGTTGAATGTTTGATTGATGTTCCAGAATATTTGGGCATCAATTTCGAAAAGCAGATTGTTCCTCGTTACAATGTGATTGAATATTTGGGATCAAAAGGCTGGCTTGGTTCTCAGGTTGGTTTGAGAGAAATTATCAAGCCTAGCAGGCTCAAGTTCTACAATCTGTTTGTAAAGCCTTATCCAGAGTGTGGGAAGATGTTCTGGAAATTCGTGGGAGATAATGAAACGAAGAGCTCGAGTAGGCATCCTATTGGATTATGGAAGGTTTTCAAACCACAAAGACATCCAGAATTAAGAGAAGATACTGAGAACATGAAGTCATTCATGAATTCTCTTGTTAAGTGGAAGCTTGGTAAGATGGAGAAGGGGTCCTCTGGTTATGGGAAGGCAGTGAGATGTGTCTCAGTTCCCTCTCCTTACTTAGTCTTGGCGGGGTGTAAGAAGGTCGATTTGACTCGTTTCTTAAAGCCAAAAATGATACTGAATCGACATAATCTTCGCAAAATGCAAGAAAAGCGCCCAGCAAATTGTGATTGCCTGACCATGCCAGGTCCAATGAGCTAG

Protein sequence

MPWKEPRLVTYETENIEKKIDFLIHKMKFGVECLIDVPEYLGINFEKQIVPRYNVIEYLGSKGWLGSQVGLREIIKPSRLKFYNLFVKPYPECGKMFWKFVGDNETKSSSRHPIGLWKVFKPQRHPELREDTENMKSFMNSLVKWKLGKMEKGSSGYGKAVRCVSVPSPYLVLAGCKKVDLTRFLKPKMILNRHNLRKMQEKRPANCDCLTMPGPMS
Homology
[Close]
BLAST of MS026398 vs. NCBI nr
Match: XP_022142396.1 (LOW QUALITY PROTEIN: transcription termination factor MTERF15, mitochondrial-like [Momordica charantia])

HSP 1 Score: 339.0 bits (868), Expect = 3.1e-89
Identity = 161/163 (98.77%), Postives = 161/163 (98.77%), Query Frame = 0 

Query: 1   MPWKEPRLVTYETENIEKKIDFLI-HKMKFGVECLIDVPEYLGINFEKQIVPRYNVIEYL 60
           MPWKEPRLVTYETENIEKKIDFLI HKMKFGVECLIDVPEYLGINFEKQIVPRYNVIEYL
Sbjct: 320 MPWKEPRLVTYETENIEKKIDFLIHHKMKFGVECLIDVPEYLGINFEKQIVPRYNVIEYL 379

Query: 61  GSKGWLGSQVGLREIIKPSRLKFYNLFVKPYPECGKMFWKFVGDNETKSSSRHPIGLWKV 120
           GSKGWLGSQVGLREIIKPSRLKFYNLFVKPYPECGKMFWKFVGDNETKSSSRH IGLWKV
Sbjct: 380 GSKGWLGSQVGLREIIKPSRLKFYNLFVKPYPECGKMFWKFVGDNETKSSSRHLIGLWKV 439

Query: 121 FKPQRHPELREDTENMKSFMNSLVKWKLGKMEKGSSGYGKAVR 163
           FKPQRHPELREDTENMKSFMNSLVKWKLGKMEKGSSGYGKAVR
Sbjct: 440 FKPQRHPELREDTENMKSFMNSLVKWKLGKMEKGSSGYGKAVR 482

[Close]
BLAST of MS026398 vs. NCBI nr
Match: XP_022142536.1 (transcription termination factor MTERF15, mitochondrial-like isoform X2 [Momordica charantia])

HSP 1 Score: 285.8 bits (730), Expect = 3.1e-73
Identity = 133/142 (93.66%), Postives = 136/142 (95.77%), Query Frame = 0 

Query: 3   WKEPRLVTYETENIEKKIDFLIHKMKFGVECLIDVPEYLGINFEKQIVPRYNVIEYLGSK 62
           WKEPRLVTYE ENIEKKI FLIHKMKFG+ECL+DVPEYLGINF+KQIVPRYNVIEYLGSK
Sbjct: 397 WKEPRLVTYEIENIEKKIGFLIHKMKFGIECLMDVPEYLGINFKKQIVPRYNVIEYLGSK 456

Query: 63  GWLGSQVGLREIIKPSRLKFYNLFVKPYPECGKMFWKFVGDNETKSSSRHPIGLWKVFKP 122
           GWLGSQVGLREIIKPSRLKFYNLFVKPYPECGKMF KFVGDNETKS SRHPIGLWKVFKP
Sbjct: 457 GWLGSQVGLREIIKPSRLKFYNLFVKPYPECGKMFGKFVGDNETKSPSRHPIGLWKVFKP 516

Query: 123 QRHPELREDTENMKSFMNSLVK 145
           QRHPE REDTENMKSFM SLVK
Sbjct: 517 QRHPESREDTENMKSFMKSLVK 538

[Close]
BLAST of MS026398 vs. NCBI nr
Match: XP_022142535.1 (transcription termination factor MTERF15, mitochondrial-like isoform X1 [Momordica charantia])

HSP 1 Score: 285.8 bits (730), Expect = 3.1e-73
Identity = 133/142 (93.66%), Postives = 136/142 (95.77%), Query Frame = 0 

Query: 3   WKEPRLVTYETENIEKKIDFLIHKMKFGVECLIDVPEYLGINFEKQIVPRYNVIEYLGSK 62
           WKEPRLVTYE ENIEKKI FLIHKMKFG+ECL+DVPEYLGINF+KQIVPRYNVIEYLGSK
Sbjct: 477 WKEPRLVTYEIENIEKKIGFLIHKMKFGIECLMDVPEYLGINFKKQIVPRYNVIEYLGSK 536

Query: 63  GWLGSQVGLREIIKPSRLKFYNLFVKPYPECGKMFWKFVGDNETKSSSRHPIGLWKVFKP 122
           GWLGSQVGLREIIKPSRLKFYNLFVKPYPECGKMF KFVGDNETKS SRHPIGLWKVFKP
Sbjct: 537 GWLGSQVGLREIIKPSRLKFYNLFVKPYPECGKMFGKFVGDNETKSPSRHPIGLWKVFKP 596

Query: 123 QRHPELREDTENMKSFMNSLVK 145
           QRHPE REDTENMKSFM SLVK
Sbjct: 597 QRHPESREDTENMKSFMKSLVK 618

[Close]
BLAST of MS026398 vs. NCBI nr
Match: XP_023519912.1 (transcription termination factor MTERF15, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023519913.1 transcription termination factor MTERF15, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023519914.1 transcription termination factor MTERF15, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 272.7 bits (696), Expect = 2.7e-69
Identity = 123/141 (87.23%), Postives = 133/141 (94.33%), Query Frame = 0 

Query: 3   WKEPRLVTYETENIEKKIDFLIHKMKFGVECLIDVPEYLGINFEKQIVPRYNVIEYLGSK 62
           WKEPRL+TYE ENIEKKIDFL HKMKFGV+CL+DVPEYLGINFEKQIVPRY+VIEYL SK
Sbjct: 313 WKEPRLITYELENIEKKIDFLTHKMKFGVDCLMDVPEYLGINFEKQIVPRYHVIEYLDSK 372

Query: 63  GWLGSQVGLREIIKPSRLKFYNLFVKPYPECGKMFWKFVGDNETKSSSRHPIGLWKVFKP 122
           GWLGSQVGLREIIKPSRL+FYNLFVKPYPECGKMF KFVGDNETKS SRHP+GLWKVFKP
Sbjct: 373 GWLGSQVGLREIIKPSRLRFYNLFVKPYPECGKMFGKFVGDNETKSPSRHPMGLWKVFKP 432

Query: 123 QRHPELREDTENMKSFMNSLV 144
           Q+HPE +EDT+NMKSFM S +
Sbjct: 433 QKHPESKEDTKNMKSFMESFI 453

[Close]
BLAST of MS026398 vs. NCBI nr
Match: XP_023001078.1 (transcription termination factor MTERF15, mitochondrial [Cucurbita maxima] >XP_023001079.1 transcription termination factor MTERF15, mitochondrial [Cucurbita maxima] >XP_023001080.1 transcription termination factor MTERF15, mitochondrial [Cucurbita maxima])

HSP 1 Score: 270.8 bits (691), Expect = 1.0e-68
Identity = 124/141 (87.94%), Postives = 132/141 (93.62%), Query Frame = 0 

Query: 3   WKEPRLVTYETENIEKKIDFLIHKMKFGVECLIDVPEYLGINFEKQIVPRYNVIEYLGSK 62
           WKEPRL+TYE ENIEKKIDFL HKMKFGV+CL+DVPEYLGINFEKQIVPRY VIEYL SK
Sbjct: 313 WKEPRLITYELENIEKKIDFLTHKMKFGVDCLMDVPEYLGINFEKQIVPRYLVIEYLESK 372

Query: 63  GWLGSQVGLREIIKPSRLKFYNLFVKPYPECGKMFWKFVGDNETKSSSRHPIGLWKVFKP 122
           GWLGSQVGLREIIKPSRL+FYNLFVKPYPECGK+F KFVGDNETKS SRHPIGLWKVFKP
Sbjct: 373 GWLGSQVGLREIIKPSRLRFYNLFVKPYPECGKIFGKFVGDNETKSPSRHPIGLWKVFKP 432

Query: 123 QRHPELREDTENMKSFMNSLV 144
           Q+HPE +EDT+NMKSFM S V
Sbjct: 433 QKHPESKEDTKNMKSFMESFV 453

[Close]
BLAST of MS026398 vs. ExPASy Swiss-Prot
Match: Q9C6A1 (Transcription termination factor MTERF15, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF15 PE=2 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 3.5e-43
Identity = 79/140 (56.43%), Postives = 103/140 (73.57%), Query Frame = 0 

Query: 3   WKEPRLVTYETENIEKKIDFLIHKMKFGVECLIDVPEYLGINFEKQIVPRYNVIEYLGSK 62
           WKEPR++ YE E+IEKKI+FL ++M F + CL DVPEYLG+N +KQIVPRYNVI+YL  K
Sbjct: 307 WKEPRVILYEIEDIEKKIEFLTNRMGFHINCLADVPEYLGVNLQKQIVPRYNVIDYLKLK 366

Query: 63  GWLGSQVGLREIIKPSRLKFYNLFVKPYPECGKMFWKFVGDNETKSSSRHPIGLWKVFKP 122
           G LG  +GL+ +IKPS  +FYNL+V PYPEC ++F K       + + RHP GLWK+ KP
Sbjct: 367 GGLGCDIGLKGLIKPSMKRFYNLYVMPYPECERIFGK--RKENVRVNKRHPAGLWKLMKP 426

Query: 123 QRHPELREDTENMKSFMNSL 143
             +   +ED +NMKSF+ SL
Sbjct: 427 PSNLTTKEDVQNMKSFIESL 444

[Close]
BLAST of MS026398 vs. ExPASy TrEMBL
Match: A0A6J1CM22 (LOW QUALITY PROTEIN: transcription termination factor MTERF15, mitochondrial-like OS=Momordica charantia OX=3673 GN=LOC111012536 PE=3 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 1.5e-89
Identity = 161/163 (98.77%), Postives = 161/163 (98.77%), Query Frame = 0 

Query: 1   MPWKEPRLVTYETENIEKKIDFLI-HKMKFGVECLIDVPEYLGINFEKQIVPRYNVIEYL 60
           MPWKEPRLVTYETENIEKKIDFLI HKMKFGVECLIDVPEYLGINFEKQIVPRYNVIEYL
Sbjct: 320 MPWKEPRLVTYETENIEKKIDFLIHHKMKFGVECLIDVPEYLGINFEKQIVPRYNVIEYL 379

Query: 61  GSKGWLGSQVGLREIIKPSRLKFYNLFVKPYPECGKMFWKFVGDNETKSSSRHPIGLWKV 120
           GSKGWLGSQVGLREIIKPSRLKFYNLFVKPYPECGKMFWKFVGDNETKSSSRH IGLWKV
Sbjct: 380 GSKGWLGSQVGLREIIKPSRLKFYNLFVKPYPECGKMFWKFVGDNETKSSSRHLIGLWKV 439

Query: 121 FKPQRHPELREDTENMKSFMNSLVKWKLGKMEKGSSGYGKAVR 163
           FKPQRHPELREDTENMKSFMNSLVKWKLGKMEKGSSGYGKAVR
Sbjct: 440 FKPQRHPELREDTENMKSFMNSLVKWKLGKMEKGSSGYGKAVR 482

[Close]
BLAST of MS026398 vs. ExPASy TrEMBL
Match: A0A6J1CL75 (transcription termination factor MTERF15, mitochondrial-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111012626 PE=3 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 1.5e-73
Identity = 133/142 (93.66%), Postives = 136/142 (95.77%), Query Frame = 0 

Query: 3   WKEPRLVTYETENIEKKIDFLIHKMKFGVECLIDVPEYLGINFEKQIVPRYNVIEYLGSK 62
           WKEPRLVTYE ENIEKKI FLIHKMKFG+ECL+DVPEYLGINF+KQIVPRYNVIEYLGSK
Sbjct: 477 WKEPRLVTYEIENIEKKIGFLIHKMKFGIECLMDVPEYLGINFKKQIVPRYNVIEYLGSK 536

Query: 63  GWLGSQVGLREIIKPSRLKFYNLFVKPYPECGKMFWKFVGDNETKSSSRHPIGLWKVFKP 122
           GWLGSQVGLREIIKPSRLKFYNLFVKPYPECGKMF KFVGDNETKS SRHPIGLWKVFKP
Sbjct: 537 GWLGSQVGLREIIKPSRLKFYNLFVKPYPECGKMFGKFVGDNETKSPSRHPIGLWKVFKP 596

Query: 123 QRHPELREDTENMKSFMNSLVK 145
           QRHPE REDTENMKSFM SLVK
Sbjct: 597 QRHPESREDTENMKSFMKSLVK 618

[Close]
BLAST of MS026398 vs. ExPASy TrEMBL
Match: A0A6J1CMG9 (transcription termination factor MTERF15, mitochondrial-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111012626 PE=3 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 1.5e-73
Identity = 133/142 (93.66%), Postives = 136/142 (95.77%), Query Frame = 0 

Query: 3   WKEPRLVTYETENIEKKIDFLIHKMKFGVECLIDVPEYLGINFEKQIVPRYNVIEYLGSK 62
           WKEPRLVTYE ENIEKKI FLIHKMKFG+ECL+DVPEYLGINF+KQIVPRYNVIEYLGSK
Sbjct: 397 WKEPRLVTYEIENIEKKIGFLIHKMKFGIECLMDVPEYLGINFKKQIVPRYNVIEYLGSK 456

Query: 63  GWLGSQVGLREIIKPSRLKFYNLFVKPYPECGKMFWKFVGDNETKSSSRHPIGLWKVFKP 122
           GWLGSQVGLREIIKPSRLKFYNLFVKPYPECGKMF KFVGDNETKS SRHPIGLWKVFKP
Sbjct: 457 GWLGSQVGLREIIKPSRLKFYNLFVKPYPECGKMFGKFVGDNETKSPSRHPIGLWKVFKP 516

Query: 123 QRHPELREDTENMKSFMNSLVK 145
           QRHPE REDTENMKSFM SLVK
Sbjct: 517 QRHPESREDTENMKSFMKSLVK 538

[Close]
BLAST of MS026398 vs. ExPASy TrEMBL
Match: A0A6J1KK29 (transcription termination factor MTERF15, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111495333 PE=3 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 5.0e-69
Identity = 124/141 (87.94%), Postives = 132/141 (93.62%), Query Frame = 0 

Query: 3   WKEPRLVTYETENIEKKIDFLIHKMKFGVECLIDVPEYLGINFEKQIVPRYNVIEYLGSK 62
           WKEPRL+TYE ENIEKKIDFL HKMKFGV+CL+DVPEYLGINFEKQIVPRY VIEYL SK
Sbjct: 313 WKEPRLITYELENIEKKIDFLTHKMKFGVDCLMDVPEYLGINFEKQIVPRYLVIEYLESK 372

Query: 63  GWLGSQVGLREIIKPSRLKFYNLFVKPYPECGKMFWKFVGDNETKSSSRHPIGLWKVFKP 122
           GWLGSQVGLREIIKPSRL+FYNLFVKPYPECGK+F KFVGDNETKS SRHPIGLWKVFKP
Sbjct: 373 GWLGSQVGLREIIKPSRLRFYNLFVKPYPECGKIFGKFVGDNETKSPSRHPIGLWKVFKP 432

Query: 123 QRHPELREDTENMKSFMNSLV 144
           Q+HPE +EDT+NMKSFM S V
Sbjct: 433 QKHPESKEDTKNMKSFMESFV 453

[Close]
BLAST of MS026398 vs. ExPASy TrEMBL
Match: A0A6J1EK12 (transcription termination factor MTERF15, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111434019 PE=3 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 4.2e-68
Identity = 121/141 (85.82%), Postives = 131/141 (92.91%), Query Frame = 0 

Query: 3   WKEPRLVTYETENIEKKIDFLIHKMKFGVECLIDVPEYLGINFEKQIVPRYNVIEYLGSK 62
           WKEPRL+TYE ENIEKKIDFL HKMKFGV+CL+DVPEYLGINFEKQIVPRY+VIEYL SK
Sbjct: 313 WKEPRLITYELENIEKKIDFLTHKMKFGVDCLMDVPEYLGINFEKQIVPRYHVIEYLESK 372

Query: 63  GWLGSQVGLREIIKPSRLKFYNLFVKPYPECGKMFWKFVGDNETKSSSRHPIGLWKVFKP 122
           GWLGSQVGLREIIKPSRL+FYNLFVKPYPECGKMF KFVGDN+ KS  RHPIGLWKVFKP
Sbjct: 373 GWLGSQVGLREIIKPSRLRFYNLFVKPYPECGKMFGKFVGDNKMKSPRRHPIGLWKVFKP 432

Query: 123 QRHPELREDTENMKSFMNSLV 144
           Q+HPE +EDT+NMKSFM S +
Sbjct: 433 QKHPESKEDTKNMKSFMESFI 453

[Close]
BLAST of MS026398 vs. TAIR 10
Match: AT1G74120.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 176.4 bits (446), Expect = 2.5e-44
Identity = 79/140 (56.43%), Postives = 103/140 (73.57%), Query Frame = 0 

Query: 3   WKEPRLVTYETENIEKKIDFLIHKMKFGVECLIDVPEYLGINFEKQIVPRYNVIEYLGSK 62
           WKEPR++ YE E+IEKKI+FL ++M F + CL DVPEYLG+N +KQIVPRYNVI+YL  K
Sbjct: 307 WKEPRVILYEIEDIEKKIEFLTNRMGFHINCLADVPEYLGVNLQKQIVPRYNVIDYLKLK 366

Query: 63  GWLGSQVGLREIIKPSRLKFYNLFVKPYPECGKMFWKFVGDNETKSSSRHPIGLWKVFKP 122
           G LG  +GL+ +IKPS  +FYNL+V PYPEC ++F K       + + RHP GLWK+ KP
Sbjct: 367 GGLGCDIGLKGLIKPSMKRFYNLYVMPYPECERIFGK--RKENVRVNKRHPAGLWKLMKP 426

Query: 123 QRHPELREDTENMKSFMNSL 143
             +   +ED +NMKSF+ SL
Sbjct: 427 PSNLTTKEDVQNMKSFIESL 444

[Close]
BLAST of MS026398 vs. TAIR 10
Match: AT1G62010.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 65.5 bits (158), Expect = 6.2e-11
Identity = 31/88 (35.23%), Postives = 54/88 (61.36%), Query Frame = 0 

Query: 6   PRLVTYETENIEKKIDFLIHKMKFGVECLIDVPEYLGINFEKQIVPRYNVIEYLGSKGWL 65
           P  + Y TE ++KK +FL+ +M + V+ +  +P+ LG + EK+ VPR NVI+ L SKG L
Sbjct: 301 PPCIGYSTEAVKKKTEFLVKEMNWPVKAVASIPQVLGYSLEKRTVPRCNVIKVLMSKGLL 360

Query: 66  GSQV-GLREIIKPSRLKFYNLFVKPYPE 93
            S++  +  ++  +   F NL+V  + +
Sbjct: 361 ESELPPMSSVLTSTSESFLNLYVSKHDD 388

[Close]
BLAST of MS026398 vs. TAIR 10
Match: AT1G62085.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 62.0 bits (149), Expect = 6.8e-10
Identity = 29/88 (32.95%), Postives = 54/88 (61.36%), Query Frame = 0 

Query: 6   PRLVTYETENIEKKIDFLIHKMKFGVECLIDVPEYLGINFEKQIVPRYNVIEYLGSKGWL 65
           P+ +    E ++KK +FL+ KM + ++ ++  P  LG + EK+ +PR NVI+ L SKG L
Sbjct: 357 PQCLILSAETVKKKTEFLVKKMNWPLKAVVSTPAVLGYSLEKRTIPRCNVIKALMSKGSL 416

Query: 66  GSQV-GLREIIKPSRLKFYNLFVKPYPE 93
           GS++ G+  ++  +  +F   +VK + +
Sbjct: 417 GSELPGMSSVLVCTNEEFLCRYVKNHDD 444

[Close]
BLAST of MS026398 vs. TAIR 10
Match: AT5G23930.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 62.0 bits (149), Expect = 6.8e-10
Identity = 29/98 (29.59%), Postives = 54/98 (55.10%), Query Frame = 0 

Query: 4   KEPRLVTYETENIEKKIDFLIHKMKFGVECLIDVPEYLGINFEKQIVPRYNVIEYLGSKG 63
           + P+ +    ++++KK +FL+  M + ++ +   P  LG + EK ++PR NVI+ L S G
Sbjct: 348 RHPQCIGLAADSVKKKTEFLVKTMGWPLKVVASTPIVLGFSLEKFVLPRCNVIKALMSNG 407

Query: 64  WLGSQVGLREIIKPSRLKFYNLFVKPY----PECGKMF 98
            +G    +  ++   +LKF  LFV+ +    PE   +F
Sbjct: 408 LIGEMPAISSVLTSPKLKFLKLFVEKHQDVLPELNSIF 445

[Close]
BLAST of MS026398 vs. TAIR 10
Match: AT1G61980.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 58.5 bits (140), Expect = 7.5e-09
Identity = 29/88 (32.95%), Postives = 52/88 (59.09%), Query Frame = 0 

Query: 6   PRLVTYETENIEKKIDFLIHKMKFGVECLIDVPEYLGINFEKQIVPRYNVIEYLGSKGWL 65
           P+ +    E ++KK +FL+ KM + ++ L+  P  LG + EK+ VPR NV++ L SKG +
Sbjct: 317 PQGIGLSAEMVKKKTEFLVKKMNWPLKALVSNPAVLGYSLEKRTVPRGNVVQALISKGLI 376

Query: 66  GSQV-GLREIIKPSRLKFYNLFVKPYPE 93
           GS++  +  +   +   F N +VK + +
Sbjct: 377 GSELPSISRVFVCTDQVFLNRYVKRHED 404

The following BLAST results are available for this feature:
BLAST of MS026398 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022142396.13.1e-8998.77LOW QUALITY PROTEIN: transcription termination factor MTERF15, mitochondrial-lik... [more]
XP_022142536.13.1e-7393.66transcription termination factor MTERF15, mitochondrial-like isoform X2 [Momordi... [more]
XP_022142535.13.1e-7393.66transcription termination factor MTERF15, mitochondrial-like isoform X1 [Momordi... [more]
XP_023519912.12.7e-6987.23transcription termination factor MTERF15, mitochondrial [Cucurbita pepo subsp. p... [more]
XP_023001078.11.0e-6887.94transcription termination factor MTERF15, mitochondrial [Cucurbita maxima] >XP_0... [more]
BLAST of MS026398 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9C6A13.5e-4356.43Transcription termination factor MTERF15, mitochondrial OS=Arabidopsis thaliana ... [more]
BLAST of MS026398 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1CM221.5e-8998.77LOW QUALITY PROTEIN: transcription termination factor MTERF15, mitochondrial-lik... [more]
A0A6J1CL751.5e-7393.66transcription termination factor MTERF15, mitochondrial-like isoform X1 OS=Momor... [more]
A0A6J1CMG91.5e-7393.66transcription termination factor MTERF15, mitochondrial-like isoform X2 OS=Momor... [more]
A0A6J1KK295.0e-6987.94transcription termination factor MTERF15, mitochondrial OS=Cucurbita maxima OX=3... [more]
A0A6J1EK124.2e-6885.82transcription termination factor MTERF15, mitochondrial OS=Cucurbita moschata OX... [more]
BLAST of MS026398 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G74120.12.5e-4456.43Mitochondrial transcription termination factor family protein [more]
AT1G62010.16.2e-1135.23Mitochondrial transcription termination factor family protein [more]
AT1G62085.16.8e-1032.95Mitochondrial transcription termination factor family protein [more]
AT5G23930.16.8e-1029.59Mitochondrial transcription termination factor family protein [more]
AT1G61980.17.5e-0932.95Mitochondrial transcription termination factor family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038538MTERF superfamily, mitochondrial/chloroplasticGENE3D1.25.70.10Transcription termination factor 3, mitochondrialcoord: 1..101
e-value: 3.8E-17
score: 64.3
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 6..74
e-value: 2.3E-11
score: 43.2
IPR003690Transcription termination factor, mitochondrial/chloroplasticPANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 3..140
NoneNo IPR availablePANTHERPTHR13068:SF23TRANSCRIPTION TERMINATION FACTOR MTERF15, MITOCHONDRIALcoord: 3..140

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS026398.1MS026398.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0003690 double-stranded DNA binding