MS026300 (gene) Bitter gourd (TR) v1

Overview


Name	MS026300
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	BED-type domain-containing protein
Location	scaffold38: 418901 .. 420082 (-)
RNA-Seq Expression	MS026300
Synteny	MS026300

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGAAGATGGCGATGACGGATAAAGATAAATTGGAGATCACCAGAGAACATCCTGCATATGTAAATGGACAAGGTGCTCTTGGTACTGACTTTGCAATCTTGGGGAGAACTGTAAATGCCCCAGGTATGAATCATCTTATGCCTATGGTTTATAAGGTATATCAAGGTGGAAATTCAGAAAAAAATATAATTTTGTCACTTAAAAAGGAAGATGTGTGAATTGAAAAAAAAAAGAAAAAAAGAAAAGAAAGGAAGAGTGTAGTTCGATTTGATGTAGGAGGAGGCTCTTCATTACCCTCCGTTAAGGGATAAGGGTTGGTTTTTGTGGCAAGCGGGTTTCTTTGCTGGAATATGGGGTTTGTGGCATGAAAAGAACAACAGGAATCTTAGAGGGGTAGAGAGATCCAGAGAGAAGGGGTGGCCCTTGTTTGATTTCATGTCTCTCTTTTGGATTTCAGTGTCCAAAGTTTTTTCTGTAATTACTCCGTAAGTTTGATTTGGCTTGATTTCGTTCTTTTAGTTTGACTCCTTTTGTTGGGTTGATTTTTTATGCCTCTATGTATTCTTTCATTTTTCACAATGAAGTTCGGCTTTTCATTAAAAAATATATATATATATATCTTTTATAAGGCCATAAGTTAGTCCATTTTCTATAATAGCAAACCATTCTAGTTATACATGTCTATTATCCCAACTAAGCCTCCACTTAGATCAAGCCTGCTTAAAAGTTGTTTTGGCTTTTCATCAATAGCACCACCTATTCTGTAGTATATTTTGTGCTCTTTTCAGATACTGTATTTGATTTTCCATGCTGCATCTACAGGTGATTGGTGGTCTGGGTATGGTTACGAAATCCCCTCGCTCCAAAGAGCGGCAATACGAATTCTTAGCCAACCCTGTAGTTCTTATGGGTGTAGATGGAACTGGGTCACGTTCGAAAGTTTGCACTCGAAGAAGCGTAATAGAGCTGAACAGGAAAAGTTGAACGATCTGGTGTTTGTACAGTGCAATCTTTGGTTGCAACACATTTGTTGGACTCGGGACAGTAAATATAAACCCGTTGTATTCGACGATATAGATGTAAGTTTAGAATGGCCAACGGAACTCGAATCCTCGGCTCCTGTTTTAGATGATTCATTGTTGGATAATCTACCTCTTGAATGTAGAGGGAGCCCTTAA

mRNA sequence

ATGTTGAAGATGGCGATGACGGATAAAGATAAATTGGAGATCACCAGAGAACATCCTGCATATGTAAATGGACAAGGTGCTCTTGGTACTGACTTTGCAATCTTGGGGAGAACTGTAAATGCCCCAGGTGATTGGTGGTCTGGGTATGGTTACGAAATCCCCTCGCTCCAAAGAGCGGCAATACGAATTCTTAGCCAACCCTGTAGTTCTTATGGGTGTAGATGGAACTGGGTCACGTTCGAAAGTTTGCACTCGAAGAAGCGTAATAGAGCTGAACAGGAAAAGTTGAACGATCTGGTGTTTGTACAGTGCAATCTTTGGTTGCAACACATTTGTTGGACTCGGGACAGTAAATATAAACCCGTTGTATTCGACGATATAGATGTAAGTTTAGAATGGCCAACGGAACTCGAATCCTCGGCTCCTGTTTTAGATGATTCATTGTTGGATAATCTACCTCTTGAATGTAGAGGGAGCCCTTAA

Coding sequence (CDS)

ATGTTGAAGATGGCGATGACGGATAAAGATAAATTGGAGATCACCAGAGAACATCCTGCATATGTAAATGGACAAGGTGCTCTTGGTACTGACTTTGCAATCTTGGGGAGAACTGTAAATGCCCCAGGTGATTGGTGGTCTGGGTATGGTTACGAAATCCCCTCGCTCCAAAGAGCGGCAATACGAATTCTTAGCCAACCCTGTAGTTCTTATGGGTGTAGATGGAACTGGGTCACGTTCGAAAGTTTGCACTCGAAGAAGCGTAATAGAGCTGAACAGGAAAAGTTGAACGATCTGGTGTTTGTACAGTGCAATCTTTGGTTGCAACACATTTGTTGGACTCGGGACAGTAAATATAAACCCGTTGTATTCGACGATATAGATGTAAGTTTAGAATGGCCAACGGAACTCGAATCCTCGGCTCCTGTTTTAGATGATTCATTGTTGGATAATCTACCTCTTGAATGTAGAGGGAGCCCTTAA

Protein sequence

MLKMAMTDKDKLEITREHPAYVNGQGALGTDFAILGRTVNAPGDWWSGYGYEIPSLQRAAIRILSQPCSSYGCRWNWVTFESLHSKKRNRAEQEKLNDLVFVQCNLWLQHICWTRDSKYKPVVFDDIDVSLEWPTELESSAPVLDDSLLDNLPLECRGSP

Homology

[Close]

BLAST of MS026300 vs. NCBI nr
Match: XP_022152799.1 (uncharacterized protein LOC111020429 [Momordica charantia] >XP_022152801.1 uncharacterized protein LOC111020429 [Momordica charantia])

HSP 1 Score: 344.0 bits (881), Expect = 7.1e-91
Identity = 158/160 (98.75%), Postives = 158/160 (98.75%), Query Frame = 0


Query: 1   MLKMAMTDKDKLEITREHPAYVNGQGALGTDFAILGRTVNAPGDWWSGYGYEIPSLQRAA 60
           MLKMAMTDKDKLEITREHPAYVNGQGALGTDFAILGRTVNAPGDWWSGYGYEIPSLQRAA
Sbjct: 513 MLKMAMTDKDKLEITREHPAYVNGQGALGTDFAILGRTVNAPGDWWSGYGYEIPSLQRAA 572

Query: 61  IRILSQPCSSYGCRWNWVTFESLHSKKRNRAEQEKLNDLVFVQCNLWLQHICWTRDSKYK 120
           IRILSQPCSSYGCRWNWVTFESLHSKKRNRAEQEKLNDLVFVQCNLWLQHICWTRDSKYK
Sbjct: 573 IRILSQPCSSYGCRWNWVTFESLHSKKRNRAEQEKLNDLVFVQCNLWLQHICWTRDSKYK 632

Query: 121 PVVFDDIDVSLEWPTELESSAPVLDDSLLDNLPLECRGSP 161
           PVVFDDIDVSLEWPTE ESSAPVLDDS LDNLPLECRGSP
Sbjct: 633 PVVFDDIDVSLEWPTEFESSAPVLDDSWLDNLPLECRGSP 672

[Close]

BLAST of MS026300 vs. NCBI nr
Match: XP_038876874.1 (uncharacterized protein LOC120069237 isoform X1 [Benincasa hispida] >XP_038876875.1 uncharacterized protein LOC120069237 isoform X1 [Benincasa hispida])

HSP 1 Score: 317.0 bits (811), Expect = 9.3e-83
Identity = 146/161 (90.68%), Postives = 153/161 (95.03%), Query Frame = 0


Query: 1   MLKMAMTDKDKLEITREHPAYVNGQGALGTDFAILGRTVNAPGDWWSGYGYEIPSLQRAA 60
           MLKMA TDKDK+EITREHPAYVNGQGALGTDFAILGRT+NAPGDWWSGYGYEIP+LQRAA
Sbjct: 524 MLKMATTDKDKMEITREHPAYVNGQGALGTDFAILGRTINAPGDWWSGYGYEIPTLQRAA 583

Query: 61  IRILSQPCSSYGC-RWNWVTFESLHSKKRNRAEQEKLNDLVFVQCNLWLQHICWTRDSKY 120
           IRIL+QPCSSYGC RWNW TFE+LHSKKR+RAEQEKLNDLVFVQCNLWLQHIC TRD KY
Sbjct: 584 IRILNQPCSSYGCSRWNWSTFETLHSKKRSRAEQEKLNDLVFVQCNLWLQHICLTRDGKY 643

Query: 121 KPVVFDDIDVSLEWPTELESSAPVLDDSLLDNLPLECRGSP 161
           KPVVFDDIDVSLEWPTE E+SA VLDDS LDNLPLECRGSP
Sbjct: 644 KPVVFDDIDVSLEWPTEFETSAHVLDDSWLDNLPLECRGSP 684

[Close]

BLAST of MS026300 vs. NCBI nr
Match: XP_038876877.1 (uncharacterized protein LOC120069237 isoform X2 [Benincasa hispida] >XP_038876878.1 uncharacterized protein LOC120069237 isoform X2 [Benincasa hispida])

HSP 1 Score: 317.0 bits (811), Expect = 9.3e-83
Identity = 146/161 (90.68%), Postives = 153/161 (95.03%), Query Frame = 0


Query: 1   MLKMAMTDKDKLEITREHPAYVNGQGALGTDFAILGRTVNAPGDWWSGYGYEIPSLQRAA 60
           MLKMA TDKDK+EITREHPAYVNGQGALGTDFAILGRT+NAPGDWWSGYGYEIP+LQRAA
Sbjct: 513 MLKMATTDKDKMEITREHPAYVNGQGALGTDFAILGRTINAPGDWWSGYGYEIPTLQRAA 572

Query: 61  IRILSQPCSSYGC-RWNWVTFESLHSKKRNRAEQEKLNDLVFVQCNLWLQHICWTRDSKY 120
           IRIL+QPCSSYGC RWNW TFE+LHSKKR+RAEQEKLNDLVFVQCNLWLQHIC TRD KY
Sbjct: 573 IRILNQPCSSYGCSRWNWSTFETLHSKKRSRAEQEKLNDLVFVQCNLWLQHICLTRDGKY 632

Query: 121 KPVVFDDIDVSLEWPTELESSAPVLDDSLLDNLPLECRGSP 161
           KPVVFDDIDVSLEWPTE E+SA VLDDS LDNLPLECRGSP
Sbjct: 633 KPVVFDDIDVSLEWPTEFETSAHVLDDSWLDNLPLECRGSP 673

[Close]

BLAST of MS026300 vs. NCBI nr
Match: XP_023007736.1 (uncharacterized protein LOC111500259 [Cucurbita maxima] >XP_023007737.1 uncharacterized protein LOC111500259 [Cucurbita maxima] >XP_023007738.1 uncharacterized protein LOC111500259 [Cucurbita maxima])

HSP 1 Score: 311.6 bits (797), Expect = 3.9e-81
Identity = 144/161 (89.44%), Postives = 149/161 (92.55%), Query Frame = 0


Query: 1   MLKMAMTDKDKLEITREHPAYVNGQGALGTDFAILGRTVNAPGDWWSGYGYEIPSLQRAA 60
           MLKMA TDKDK+EITREHPAYVN QGALGTDFAILGRT+N PGDWWSGYGYEIP+LQR A
Sbjct: 513 MLKMATTDKDKMEITREHPAYVNAQGALGTDFAILGRTINTPGDWWSGYGYEIPTLQRVA 572

Query: 61  IRILSQPCSSYGC-RWNWVTFESLHSKKRNRAEQEKLNDLVFVQCNLWLQHICWTRDSKY 120
           IRILSQPCSSYGC RWNW TFE+LHSKKR+R EQEKLNDLVFVQCNLWLQHI WTRD KY
Sbjct: 573 IRILSQPCSSYGCSRWNWSTFETLHSKKRSRTEQEKLNDLVFVQCNLWLQHIRWTRDGKY 632

Query: 121 KPVVFDDIDVSLEWPTELESSAPVLDDSLLDNLPLECRGSP 161
           KPVVFDDIDVSLEWPTELESSA VLDDS LDNLPLEC GSP
Sbjct: 633 KPVVFDDIDVSLEWPTELESSARVLDDSWLDNLPLECGGSP 673

[Close]

BLAST of MS026300 vs. NCBI nr
Match: XP_022923437.1 (uncharacterized protein LOC111431132 [Cucurbita moschata] >XP_022923438.1 uncharacterized protein LOC111431132 [Cucurbita moschata] >XP_023551812.1 uncharacterized protein LOC111809668 [Cucurbita pepo subsp. pepo] >XP_023551814.1 uncharacterized protein LOC111809668 [Cucurbita pepo subsp. pepo] >XP_023551815.1 uncharacterized protein LOC111809668 [Cucurbita pepo subsp. pepo] >XP_023551816.1 uncharacterized protein LOC111809668 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 310.8 bits (795), Expect = 6.7e-81
Identity = 144/161 (89.44%), Postives = 149/161 (92.55%), Query Frame = 0


Query: 1   MLKMAMTDKDKLEITREHPAYVNGQGALGTDFAILGRTVNAPGDWWSGYGYEIPSLQRAA 60
           MLKMA TDKDK+EITREHPAYVN QGALGTDFAILGRT+N PGDWWSGYGYEIP+LQRAA
Sbjct: 513 MLKMATTDKDKMEITREHPAYVNAQGALGTDFAILGRTINTPGDWWSGYGYEIPTLQRAA 572

Query: 61  IRILSQPCSSYGC-RWNWVTFESLHSKKRNRAEQEKLNDLVFVQCNLWLQHICWTRDSKY 120
           IRILSQPCSSYGC RWNW TFE+LHSKKR+  EQEKLNDLVFVQCNLWLQHI WTRD KY
Sbjct: 573 IRILSQPCSSYGCSRWNWSTFETLHSKKRSTTEQEKLNDLVFVQCNLWLQHIRWTRDGKY 632

Query: 121 KPVVFDDIDVSLEWPTELESSAPVLDDSLLDNLPLECRGSP 161
           KPVVFDDIDVSLEWPTELESSA VLDDS LDNLPLEC GSP
Sbjct: 633 KPVVFDDIDVSLEWPTELESSAHVLDDSWLDNLPLECGGSP 673

[Close]

BLAST of MS026300 vs. ExPASy TrEMBL
Match: A0A6J1DH28 (uncharacterized protein LOC111020429 OS=Momordica charantia OX=3673 GN=LOC111020429 PE=4 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 3.4e-91
Identity = 158/160 (98.75%), Postives = 158/160 (98.75%), Query Frame = 0


Query: 1   MLKMAMTDKDKLEITREHPAYVNGQGALGTDFAILGRTVNAPGDWWSGYGYEIPSLQRAA 60
           MLKMAMTDKDKLEITREHPAYVNGQGALGTDFAILGRTVNAPGDWWSGYGYEIPSLQRAA
Sbjct: 513 MLKMAMTDKDKLEITREHPAYVNGQGALGTDFAILGRTVNAPGDWWSGYGYEIPSLQRAA 572

Query: 61  IRILSQPCSSYGCRWNWVTFESLHSKKRNRAEQEKLNDLVFVQCNLWLQHICWTRDSKYK 120
           IRILSQPCSSYGCRWNWVTFESLHSKKRNRAEQEKLNDLVFVQCNLWLQHICWTRDSKYK
Sbjct: 573 IRILSQPCSSYGCRWNWVTFESLHSKKRNRAEQEKLNDLVFVQCNLWLQHICWTRDSKYK 632

Query: 121 PVVFDDIDVSLEWPTELESSAPVLDDSLLDNLPLECRGSP 161
           PVVFDDIDVSLEWPTE ESSAPVLDDS LDNLPLECRGSP
Sbjct: 633 PVVFDDIDVSLEWPTEFESSAPVLDDSWLDNLPLECRGSP 672

[Close]

BLAST of MS026300 vs. ExPASy TrEMBL
Match: A0A6J1KZI0 (uncharacterized protein LOC111500259 OS=Cucurbita maxima OX=3661 GN=LOC111500259 PE=4 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 1.9e-81
Identity = 144/161 (89.44%), Postives = 149/161 (92.55%), Query Frame = 0


Query: 1   MLKMAMTDKDKLEITREHPAYVNGQGALGTDFAILGRTVNAPGDWWSGYGYEIPSLQRAA 60
           MLKMA TDKDK+EITREHPAYVN QGALGTDFAILGRT+N PGDWWSGYGYEIP+LQR A
Sbjct: 513 MLKMATTDKDKMEITREHPAYVNAQGALGTDFAILGRTINTPGDWWSGYGYEIPTLQRVA 572

Query: 61  IRILSQPCSSYGC-RWNWVTFESLHSKKRNRAEQEKLNDLVFVQCNLWLQHICWTRDSKY 120
           IRILSQPCSSYGC RWNW TFE+LHSKKR+R EQEKLNDLVFVQCNLWLQHI WTRD KY
Sbjct: 573 IRILSQPCSSYGCSRWNWSTFETLHSKKRSRTEQEKLNDLVFVQCNLWLQHIRWTRDGKY 632

Query: 121 KPVVFDDIDVSLEWPTELESSAPVLDDSLLDNLPLECRGSP 161
           KPVVFDDIDVSLEWPTELESSA VLDDS LDNLPLEC GSP
Sbjct: 633 KPVVFDDIDVSLEWPTELESSARVLDDSWLDNLPLECGGSP 673

[Close]

BLAST of MS026300 vs. ExPASy TrEMBL
Match: A0A6J1E9N1 (uncharacterized protein LOC111431132 OS=Cucurbita moschata OX=3662 GN=LOC111431132 PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 3.2e-81
Identity = 144/161 (89.44%), Postives = 149/161 (92.55%), Query Frame = 0


Query: 1   MLKMAMTDKDKLEITREHPAYVNGQGALGTDFAILGRTVNAPGDWWSGYGYEIPSLQRAA 60
           MLKMA TDKDK+EITREHPAYVN QGALGTDFAILGRT+N PGDWWSGYGYEIP+LQRAA
Sbjct: 513 MLKMATTDKDKMEITREHPAYVNAQGALGTDFAILGRTINTPGDWWSGYGYEIPTLQRAA 572

Query: 61  IRILSQPCSSYGC-RWNWVTFESLHSKKRNRAEQEKLNDLVFVQCNLWLQHICWTRDSKY 120
           IRILSQPCSSYGC RWNW TFE+LHSKKR+  EQEKLNDLVFVQCNLWLQHI WTRD KY
Sbjct: 573 IRILSQPCSSYGCSRWNWSTFETLHSKKRSTTEQEKLNDLVFVQCNLWLQHIRWTRDGKY 632

Query: 121 KPVVFDDIDVSLEWPTELESSAPVLDDSLLDNLPLECRGSP 161
           KPVVFDDIDVSLEWPTELESSA VLDDS LDNLPLEC GSP
Sbjct: 633 KPVVFDDIDVSLEWPTELESSAHVLDDSWLDNLPLECGGSP 673

[Close]

BLAST of MS026300 vs. ExPASy TrEMBL
Match: A0A1S3BLP8 (uncharacterized protein LOC103490927 OS=Cucumis melo OX=3656 GN=LOC103490927 PE=4 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 7.2e-81
Identity = 144/162 (88.89%), Postives = 153/162 (94.44%), Query Frame = 0


Query: 1   MLKMAMTDKDKLEITREHPAYVNGQGALGTDFAILGRTVNAPGDWWSGYGYEIPSLQRAA 60
           MLKMA TDKDK+EITREHPAYVNGQGALGTDFAILGRT+N+PGDWWSGYGYEIP+LQRAA
Sbjct: 513 MLKMATTDKDKMEITREHPAYVNGQGALGTDFAILGRTINSPGDWWSGYGYEIPTLQRAA 572

Query: 61  IRILSQPCSSYGC-RWNWVTFESLHSKKRNRAEQEKLNDLVFVQCNLWLQHICWTRDSKY 120
           +RILSQPCSSYGC RWNW TFE+LHSKKR+RAEQEKL DLVFVQCNLWLQHIC TRDSKY
Sbjct: 573 VRILSQPCSSYGCSRWNWSTFETLHSKKRSRAEQEKLTDLVFVQCNLWLQHICSTRDSKY 632

Query: 121 KPVVFDDIDVSLEWPTELESSAPVLDDSLLD-NLPLECRGSP 161
           KP+VFDDIDVSLEWP+ELE SA VLDDS LD NLPLECRGSP
Sbjct: 633 KPIVFDDIDVSLEWPSELECSAHVLDDSWLDNNLPLECRGSP 674

[Close]

BLAST of MS026300 vs. ExPASy TrEMBL
Match: A0A5D3D7G5 (HAT transposon superfamily OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold443G001370 PE=4 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 7.2e-81
Identity = 144/162 (88.89%), Postives = 153/162 (94.44%), Query Frame = 0


Query: 1   MLKMAMTDKDKLEITREHPAYVNGQGALGTDFAILGRTVNAPGDWWSGYGYEIPSLQRAA 60
           MLKMA TDKDK+EITREHPAYVNGQGALGTDFAILGRT+N+PGDWWSGYGYEIP+LQRAA
Sbjct: 513 MLKMATTDKDKMEITREHPAYVNGQGALGTDFAILGRTINSPGDWWSGYGYEIPTLQRAA 572

Query: 61  IRILSQPCSSYGC-RWNWVTFESLHSKKRNRAEQEKLNDLVFVQCNLWLQHICWTRDSKY 120
           +RILSQPCSSYGC RWNW TFE+LHSKKR+RAEQEKL DLVFVQCNLWLQHIC TRDSKY
Sbjct: 573 VRILSQPCSSYGCSRWNWSTFETLHSKKRSRAEQEKLTDLVFVQCNLWLQHICSTRDSKY 632

Query: 121 KPVVFDDIDVSLEWPTELESSAPVLDDSLLD-NLPLECRGSP 161
           KP+VFDDIDVSLEWP+ELE SA VLDDS LD NLPLECRGSP
Sbjct: 633 KPIVFDDIDVSLEWPSELECSAHVLDDSWLDNNLPLECRGSP 674

[Close]

BLAST of MS026300 vs. TAIR 10
Match: AT5G33406.1 (hAT dimerisation domain-containing protein / transposase-related )

HSP 1 Score: 111.3 bits (277), Expect = 7.2e-25
Identity = 57/142 (40.14%), Postives = 81/142 (57.04%), Query Frame = 0


Query: 13  EITREHPAYVNGQGALGTDFAILGRTVNAPGDWWSGYGYEIPSLQRAAIRILSQPCSSYG 72
           +I  E  A+    G  G   AI  RT  +P +WWS YG   P+LQ  AI++LS  CS+ G
Sbjct: 185 KIITELDAFKKATGLFGIPMAIRLRTKMSPAEWWSAYGSSTPNLQNFAIKVLSLTCSATG 244

Query: 73  CRWNWVTFESLHSKKRNRAEQEKLNDLVFVQCNLWLQHICWTRDSKYKPVVFDDIDVSLE 132
           C  NW  F+ LH+K+RNR  Q +LND++FV+ N  LQ   + R+  + P++ ++ID   E
Sbjct: 245 CERNWGVFQLLHTKRRNRLTQCRLNDMIFVKYNRALQR-RYKRNDTFDPILLNEIDQCNE 304

Query: 133 WPT---ELESSAPVLDDSLLDN 152
           W T   E  SS    DD + +N
Sbjct: 305 WLTGRMEENSSDTENDDLVFEN 325

[Close]

BLAST of MS026300 vs. TAIR 10
Match: AT1G79740.1 (hAT transposon superfamily )

HSP 1 Score: 102.1 bits (253), Expect = 4.4e-22
Identity = 50/140 (35.71%), Postives = 74/140 (52.86%), Query Frame = 0


Query: 3   KMAMTDKDKLEITREHPAYVNGQGALGTDFAILGRTVNAPGDWWSGYGYEIPSLQRAAIR 62
           K+  T   + +IT +   +   +G  G + A+  R   +PG WW  +G   P LQR AIR
Sbjct: 479 KLLPTSDLRRDITNQIFTFTRAKGMFGCNLAMEARDSVSPGLWWEQFGDSAPVLQRVAIR 538

Query: 63  ILSQPCSSYGCRWNWVTFESLHSKKRNRAEQEKLNDLVFVQCNLWLQHICWTRDSKYKPV 122
           ILSQ CS Y     W TF+ +H ++RN+ ++E LN L +V  NL L  +         P+
Sbjct: 539 ILSQVCSGYNLERQWSTFQQMHWERRNKIDREILNKLAYVNQNLKLGRMITLETD---PI 598

Query: 123 VFDDIDVSLEWPTELESSAP 143
             +DID+  EW  E E+ +P
Sbjct: 599 ALEDIDMMSEWVEEAENPSP 615

[Close]

BLAST of MS026300 vs. TAIR 10
Match: AT4G15020.1 (hAT transposon superfamily )

HSP 1 Score: 92.0 bits (227), Expect = 4.5e-19
Identity = 52/133 (39.10%), Postives = 73/133 (54.89%), Query Frame = 0


Query: 3   KMAMTDKDKLEITREHPAYVNGQGALGTDFAILGRTVNAPGDWWSGYGYEIPSLQRAAIR 62
           ++   DK + +I +E  +Y    G  G + AI  R    P +WWS YG    +L R AIR
Sbjct: 569 RLVPDDKIQDKIIKELTSYKTAGGVFGRNLAIRARDTMLPAEWWSTYGESCLNLSRFAIR 628

Query: 63  ILSQPC-SSYGCRWNWVTFESLHSKKRNRAEQEKLNDLVFVQCNLWLQHI-CWTRDSKYK 122
           ILSQ C SS  CR N +  E ++  K N  EQ++L+DLVFVQ N+ L+ +   + D    
Sbjct: 629 ILSQTCSSSVSCRRNQIPVEHIYQSK-NSIEQKRLSDLVFVQYNMRLRQLGPGSGDDTLD 688

Query: 123 PVVFDDIDVSLEW 134
           P+  + IDV  EW
Sbjct: 689 PLSHNRIDVLKEW 700

[Close]

BLAST of MS026300 vs. TAIR 10
Match: AT4G15020.2 (hAT transposon superfamily )

HSP 1 Score: 92.0 bits (227), Expect = 4.5e-19
Identity = 52/133 (39.10%), Postives = 73/133 (54.89%), Query Frame = 0


Query: 3   KMAMTDKDKLEITREHPAYVNGQGALGTDFAILGRTVNAPGDWWSGYGYEIPSLQRAAIR 62
           ++   DK + +I +E  +Y    G  G + AI  R    P +WWS YG    +L R AIR
Sbjct: 569 RLVPDDKIQDKIIKELTSYKTAGGVFGRNLAIRARDTMLPAEWWSTYGESCLNLSRFAIR 628

Query: 63  ILSQPC-SSYGCRWNWVTFESLHSKKRNRAEQEKLNDLVFVQCNLWLQHI-CWTRDSKYK 122
           ILSQ C SS  CR N +  E ++  K N  EQ++L+DLVFVQ N+ L+ +   + D    
Sbjct: 629 ILSQTCSSSVSCRRNQIPVEHIYQSK-NSIEQKRLSDLVFVQYNMRLRQLGPGSGDDTLD 688

Query: 123 PVVFDDIDVSLEW 134
           P+  + IDV  EW
Sbjct: 689 PLSHNRIDVLKEW 700

[Close]

BLAST of MS026300 vs. TAIR 10
Match: AT3G22220.1 (hAT transposon superfamily )

HSP 1 Score: 80.1 bits (196), Expect = 1.8e-15
Identity = 45/123 (36.59%), Postives = 66/123 (53.66%), Query Frame = 0


Query: 14  ITREHPAYVNGQGALGTDFAILGRTVNAPGDWWSGYGYEIPSLQRAAIRILSQPC-SSYG 73
           + ++  +Y N  G  G + AI  R    P +WWS YG    +L R AIRILSQ C SS G
Sbjct: 574 VIKDINSYKNAVGIFGRNLAIRARDTMLPAEWWSTYGESCLNLSRFAIRILSQTCSSSIG 633

Query: 74  CRWNWVTFESLHSKKRNRAEQEKLNDLVFVQCNLWLQHIC--WTRDSKYKPVVFDDIDVS 133
              N  +   ++  K N  E+++LNDLVFVQ N+ L+ I    + D    P+   +++V 
Sbjct: 634 SVRNLTSISQIYESK-NSIERQRLNDLVFVQYNMRLRRIGSESSGDDTVDPLSHSNMEVL 693

The following BLAST results are available for this feature:

BLAST of MS026300 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022152799.1	7.1e-91	98.75	uncharacterized protein LOC111020429 [Momordica charantia] >XP_022152801.1 uncha...	[more]
XP_038876874.1	9.3e-83	90.68	uncharacterized protein LOC120069237 isoform X1 [Benincasa hispida] >XP_03887687...	[more]
XP_038876877.1	9.3e-83	90.68	uncharacterized protein LOC120069237 isoform X2 [Benincasa hispida] >XP_03887687...	[more]
XP_023007736.1	3.9e-81	89.44	uncharacterized protein LOC111500259 [Cucurbita maxima] >XP_023007737.1 uncharac...	[more]
XP_022923437.1	6.7e-81	89.44	uncharacterized protein LOC111431132 [Cucurbita moschata] >XP_022923438.1 unchar...	[more]

BLAST of MS026300 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS026300 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DH28	3.4e-91	98.75	uncharacterized protein LOC111020429 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]
A0A6J1KZI0	1.9e-81	89.44	uncharacterized protein LOC111500259 OS=Cucurbita maxima OX=3661 GN=LOC111500259...	[more]
A0A6J1E9N1	3.2e-81	89.44	uncharacterized protein LOC111431132 OS=Cucurbita moschata OX=3662 GN=LOC1114311...	[more]
A0A1S3BLP8	7.2e-81	88.89	uncharacterized protein LOC103490927 OS=Cucumis melo OX=3656 GN=LOC103490927 PE=...	[more]
A0A5D3D7G5	7.2e-81	88.89	HAT transposon superfamily OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]

BLAST of MS026300 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G33406.1	7.2e-25	40.14	hAT dimerisation domain-containing protein / transposase-related	[more]
AT1G79740.1	4.4e-22	35.71	hAT transposon superfamily	[more]
AT4G15020.1	4.5e-19	39.10	hAT transposon superfamily	[more]
AT4G15020.2	4.5e-19	39.10	hAT transposon superfamily	[more]
AT3G22220.1	1.8e-15	36.59	hAT transposon superfamily	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008906	HAT, C-terminal dimerisation domain	PFAM	PF05699	Dimer_Tnp_hAT	coord: 42..105 e-value: 2.2E-11 score: 43.4
None	No IPR available	PANTHER	PTHR32166	OSJNBA0013A04.12 PROTEIN	coord: 1..146
None	No IPR available	PANTHER	PTHR32166:SF55	BINDING PROTEIN, PUTATIVE-RELATED	coord: 1..146
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 42..106

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS026300.1	MS026300.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046983	protein dimerization activity