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MS025844 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGGGTGTTGAGAAAGATGTTTCGTATTTAAGAGGCCTTCTTCTATGCGAAAGATTGACTGCTAAACCACCAAAGAAGAAGTTGATCCAGAAAGGGATCTCCATGAAATCTTATAATCGTATTTTCGCGTCAGAGAAACTAGGCAATGTAAAGTCAAAGACAAAAAGGGCTATGGTGAGTTCTTTATTTTGATCAAGATTATTTTAGGTTGAAAAGATAAGAAATATGGTCGTTCTTGAAATATTATTCCATTTATTAATATATTTAATTTTGTACATGTTTAGATGAAGGCAAAACCTCGAGAAGCTTTTTGCGACCATTTGGTAGCAAAGACTATATCGGTAATTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGCGAGGGAAATTATTCCGTTTGGTCAAAACCCTAAATCTCCTTGCATGAGTTTACTTTTTCTTTTTTTAATTACAAAATATTTGAAATGTTTGTTTTGTATTGGGCCAGTTTGGCTGGAATTTCTATTAAAAAAAAAAAAACGAAAATTTGCTATAATTTCTTTTAATGTCTTTATTAGGCTTCCAATCTTAAAAGACAAGGAAAAAAGTAGTGTAATTTGAAAAACACGTATATAAAATATTATTTCTTTTAATTGATTAATTGATTGACGATATTAATGTATACAATTAATATAAAGTACAAATGACATGTCAAACCCAACATAGTTAGTGGTAATTGATATATATCTTCAAAATTGCATAAATACTCGAGATAAGTTTATAAAATAATAATAATTGGACAATAAGATGAATAGTCCAAGGTGTCTTTTCTTTTATAGGTTAGAAAAGATTTTATTTCTTTTATTTATATATCCAATTTTGTACATGTTTAGGTGAGTTCTGGGCCAGTGAAACCGCAACTAGTTTCTTATGCTGATTTGGCAGCAAATACAGAGGTGAGTTCAATTTTTTATTATTTTTATTTTTATTTTTATATCCAATTCTGTACATAAATCGAAACCGTGAGAATGTGATTTTTTTTTAAATAGAAATGTGGAGATTTGGTTGCAAAGATACCACAAACACCAACTGAAGCCACAACTTCAACACCAACCTCAATCACAACACCACGGCACATTAGTACTCCACCCTCACCAACCACAGCTGCTCGAGTAACAATGTTGAAAGCAAGGTTCGCCGATACGATCTTGAAAGCACAGCGGCAGCTTTGCATCAATGATGTGCCATGTGCTGTGAAGCCGGATGTGATTGAAAAATTAGTTGTTAAGCCATCTACAATTGAAAAACTGAGGCGAGCAGCGCGAGAAGCTTTGGAGGAGGTGGAACGAACTGTGGAGGTGGAAGATAGCCATAAATCCCTCAAAGATTTAGAGCGCCTTTGTGGATTTCCCATACCTTCCTGTGATGGATTCCTCGACACCATGCACTTCTATGGTTTATATTTGAAGAATGACAATAGTGAACCATGTGCTATGGAACTAAATACAATTGAAACACAAGTTGTGAAACCAGCTACGATTGAAGAAATAAGACATGCAGCTCGAGAAGCTTTGGAGGAAATCGAACGGACTGTGGAGGTGGAAGATAGCCATAAATCGTTCAAAGATTTGGAGCGCCTTTGTGGATTTTCCATACCTTCCTGTGATGGATTCCTCGATACCATGCACTTGTATGGTTTATATTTGAAGAATTAG ATGAAGGGTGTTGAGAAAGATGTTTCGTATTTAAGAGGCCTTCTTCTATGCGAAAGATTGACTGCTAAACCACCAAAGAAGAAGTTGATCCAGAAAGGGATCTCCATGAAATCTTATAATCGTATTTTCGCGTCAGAGAAACTAGGCAATGTAAAGTCAAAGACAAAAAGGGCTATGATGAAGGCAAAACCTCGAGAAGCTTTTTGCGACCATTTGGTAGCAAAGACTATATCGGTGAGTTCTGGGCCAGTGAAACCGCAACTAGTTTCTTATGCTGATTTGGCAGCAAATACAGAGAAATGTGGAGATTTGGTTGCAAAGATACCACAAACACCAACTGAAGCCACAACTTCAACACCAACCTCAATCACAACACCACGGCACATTAGTACTCCACCCTCACCAACCACAGCTGCTCGAGTAACAATGTTGAAAGCAAGGTTCGCCGATACGATCTTGAAAGCACAGCGGCAGCTTTGCATCAATGATGTGCCATGTGCTGTGAAGCCGGATGTGATTGAAAAATTAGTTGTTAAGCCATCTACAATTGAAAAACTGAGGCGAGCAGCGCGAGAAGCTTTGGAGGAGGTGGAACGAACTGTGGAGGTGGAAGATAGCCATAAATCCCTCAAAGATTTAGAGCGCCTTTGTGGATTTCCCATACCTTCCTGTGATGGATTCCTCGACACCATGCACTTCTATGGTTTATATTTGAAGAATGACAATAGTGAACCATGTGCTATGGAACTAAATACAATTGAAACACAAGTTGTGAAACCAGCTACGATTGAAGAAATAAGACATGCAGCTCGAGAAGCTTTGGAGGAAATCGAACGGACTGTGGAGGTGGAAGATAGCCATAAATCGTTCAAAGATTTGGAGCGCCTTTGTGGATTTTCCATACCTTCCTGTGATGGATTCCTCGATACCATGCACTTGTATGGTTTATATTTGAAGAATTAG ATGAAGGGTGTTGAGAAAGATGTTTCGTATTTAAGAGGCCTTCTTCTATGCGAAAGATTGACTGCTAAACCACCAAAGAAGAAGTTGATCCAGAAAGGGATCTCCATGAAATCTTATAATCGTATTTTCGCGTCAGAGAAACTAGGCAATGTAAAGTCAAAGACAAAAAGGGCTATGATGAAGGCAAAACCTCGAGAAGCTTTTTGCGACCATTTGGTAGCAAAGACTATATCGGTGAGTTCTGGGCCAGTGAAACCGCAACTAGTTTCTTATGCTGATTTGGCAGCAAATACAGAGAAATGTGGAGATTTGGTTGCAAAGATACCACAAACACCAACTGAAGCCACAACTTCAACACCAACCTCAATCACAACACCACGGCACATTAGTACTCCACCCTCACCAACCACAGCTGCTCGAGTAACAATGTTGAAAGCAAGGTTCGCCGATACGATCTTGAAAGCACAGCGGCAGCTTTGCATCAATGATGTGCCATGTGCTGTGAAGCCGGATGTGATTGAAAAATTAGTTGTTAAGCCATCTACAATTGAAAAACTGAGGCGAGCAGCGCGAGAAGCTTTGGAGGAGGTGGAACGAACTGTGGAGGTGGAAGATAGCCATAAATCCCTCAAAGATTTAGAGCGCCTTTGTGGATTTCCCATACCTTCCTGTGATGGATTCCTCGACACCATGCACTTCTATGGTTTATATTTGAAGAATGACAATAGTGAACCATGTGCTATGGAACTAAATACAATTGAAACACAAGTTGTGAAACCAGCTACGATTGAAGAAATAAGACATGCAGCTCGAGAAGCTTTGGAGGAAATCGAACGGACTGTGGAGGTGGAAGATAGCCATAAATCGTTCAAAGATTTGGAGCGCCTTTGTGGATTTTCCATACCTTCCTGTGATGGATTCCTCGATACCATGCACTTGTATGGTTTATATTTGAAGAATTAG MKGVEKDVSYLRGLLLCERLTAKPPKKKLIQKGISMKSYNRIFASEKLGNVKSKTKRAMMKAKPREAFCDHLVAKTISVSSGPVKPQLVSYADLAANTEKCGDLVAKIPQTPTEATTSTPTSITTPRHISTPPSPTTAARVTMLKARFADTILKAQRQLCINDVPCAVKPDVIEKLVVKPSTIEKLRRAAREALEEVERTVEVEDSHKSLKDLERLCGFPIPSCDGFLDTMHFYGLYLKNDNSEPCAMELNTIETQVVKPATIEEIRHAAREALEEIERTVEVEDSHKSFKDLERLCGFSIPSCDGFLDTMHLYGLYLKN Homology
BLAST of MS025844 vs. NCBI nr
Match: KAA0061663.1 (transcription factor GTE9 isoform X4 [Cucumis melo var. makuwa] >TYK21138.1 transcription factor GTE9 isoform X4 [Cucumis melo var. makuwa]) HSP 1 Score: 97.8 bits (242), Expect = 1.8e-16 Identity = 79/206 (38.35%), Postives = 107/206 (51.94%), Query Frame = 0
BLAST of MS025844 vs. NCBI nr
Match: KAG6571342.1 (hypothetical protein SDJN03_30257, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 84.7 bits (208), Expect = 1.6e-12 Identity = 64/166 (38.55%), Postives = 85/166 (51.20%), Query Frame = 0
BLAST of MS025844 vs. NCBI nr
Match: XP_031119736.1 (transcription factor GTE12-like [Ipomoea triloba]) HSP 1 Score: 58.9 bits (141), Expect = 9.1e-05 Identity = 52/149 (34.90%), Postives = 67/149 (44.97%), Query Frame = 0
BLAST of MS025844 vs. ExPASy TrEMBL
Match: A0A5D3DC97 (Transcription factor GTE9 isoform X4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold75860G00060 PE=4 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 8.6e-17 Identity = 79/206 (38.35%), Postives = 107/206 (51.94%), Query Frame = 0
BLAST of MS025844 vs. ExPASy TrEMBL
Match: A0A0A0KGL2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G421730 PE=4 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 1.4e-14 Identity = 88/224 (39.29%), Postives = 112/224 (50.00%), Query Frame = 0
BLAST of MS025844 vs. ExPASy TrEMBL
Match: A0A6A5NJM1 (Bromo domain-containing protein OS=Lupinus albus OX=3870 GN=Lal_00024012 PE=4 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 4.9e-04 Identity = 44/118 (37.29%), Postives = 67/118 (56.78%), Query Frame = 0
BLAST of MS025844 vs. ExPASy TrEMBL
Match: A0A6A4PI18 (Putative chromatin remodeler Bromodomain family OS=Lupinus albus OX=3870 GN=Lalb_Chr13g0295421 PE=4 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 4.9e-04 Identity = 44/118 (37.29%), Postives = 67/118 (56.78%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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