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MS025839 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTATGGGTGAGTCGATGGGGGAATTGGGTGCTAGTTCTGAGACAGGAATGGAAGAGGAATTCAGCGAAGGAGAAGAGGGATCTTTTAATTCGGATGATGTTCAGTTTACTAAAGATCAATGGAGGAGTTTTAGGGCACCATGGCGGTCGTCTCTAATCATCAAGGTCCTTGGGAGAAAGTTCGGTTACCAATTCCTTTTGCGCAGACTGTTAGCAATCTGGCGTCTGAAAGGGGAGTTTAAGCTAATAAGTCTGAGTAATGATTTCTTTATTGTCCGTTTGGAGCTGAAGGAGGATAGGGAAAAGATCCTCACCGATGGACCATGGAAAAATGGCAGTAAGAACCTGGTCCCCAAATTTTCGACCGTCGAAAGCGTCGATTGATAGGGCGACACTTTGGGTTCGCATCCCTGACTGCCCAATGGAATTATATAACGAAATAGGTATGAAGGGAATTGGGGATTTTATAGGCAAGACTCTGAAGATTGATTTAAAGACTCAGTCGGGGGACATGGGAAGTTTTGCAAGAATCTGTGTTGAAGTTGATTTGACCAAGAAACTCGTCTCTGATTTTACAGTATTAAGAGAACGATTTGGCATTCAATATGAAGGAATTCATCTTGTTTACTTCAATTGTGGGATCTATGGGCATAGGTTGGAAGATTGCCCCATGAGAGGAGGAACCGGCTCAACCGAAAGCAAGAAGAAAAATGAGGTACCAGAACCAGAGACAGGAGAAGCAAGGGGGTCATTGGAAGAGGAAACTAGCAAAGGCCATAACAAGGAAGCCAACAGCAACCATGATTTAAGACCAGATCCTTCACCGGGTCACAGACCTTGGATCTTGGTGGAAAACTACAAACGAAGGGGGGGGGGGAAGGACACCACGCGCAAGATCAGGAAGAGGCTTCTTGAATTCAAGGAACTTTTCGAAACAGAGCAGTGAGGCTTATAACTCATATGGGAAGGAGAATGCGGAAAGAGGACCAAATTTGCCACATGACCAGACGAATGGTAAAGGGAAAGTCAGTGATTTTATGAGATTTGGAAGTTCGAAAGGTAGCCAAGACTCAAACATATGGCAGAGCAGGAACAAAGGGATTTTTTTTGGAGGTAGAAATAGAGGTTTCGGGTCCCCGTTTGAGAACCCAGAGTTGCTGAAGTTCAATAATAATGGAGGCAGCCGAAATCCTCCATGGATGGTTGGAGATTTAGATCCAGGAGAATCAAGCTCTGATGAGGGTAATCCCCAAGACCAAGTACATAATTTCAATTTCCGAACTAAGGTTAGCAAAGAGGATTATTCTAAGGGAGACTTTGTGGACGAGGGACAATGTTCCTCGAAATCTCAGCTGAGGATTTTTATGGAAGATAGGGATGGATTGGAACTAATCAACCAAGAGTCAAACTTGGAAATGGAGCAGATGGACAACGAAATTGGCTCAACCATGGAGGAAGTGAGAGAGATTCCCACAGGAAAGTAA ATGGTTATGGGTGAGTCGATGGGGGAATTGGGTGCTAGTTCTGAGACAGGAATGGAAGAGGAATTCAGCGAAGGAGAAGAGGGATCTTTTAATTCGGATGATGTTCAGTTTACTAAAGATCAATGGAGGAGTTTTAGGGCACCATGGCGGTCGTCTCTAATCATCAAGGTCCTTGGGAGAAAGTTCGGTTACCAATTCCTTTTGCGCAGACTGTTAGCAATCTGGCGTCTGAAAGGGGAGTTTAAGCTAATAAGTCTGAGTAATGATTTCTTTATTAGCAGTGAGGCTTATAACTCATATGGGAAGGAGAATGCGGAAAGAGGACCAAATTTGCCACATGACCAGACGAATGGTAAAGGGAAAGTCAGTGATTTTATGAGATTTGGAAGTTCGAAAGGTAGCCAAGACTCAAACATATGGCAGAGCAGGAACAAAGGGATTTTTTTTGGAGGTAGAAATAGAGGTTTCGGGTCCCCGTTTGAGAACCCAGAGTTGCTGAAGTTCAATAATAATGGAGGCAGCCGAAATCCTCCATGGATGGTTGGAGATTTAGATCCAGGAGAATCAAGCTCTGATGAGGGTAATCCCCAAGACCAAGTACATAATTTCAATTTCCGAACTAAGGTTAGCAAAGAGGATTATTCTAAGGGAGACTTTGTGGACGAGGGACAATGTTCCTCGAAATCTCAGCTGAGGATTTTTATGGAAGATAGGGATGGATTGGAACTAATCAACCAAGAGTCAAACTTGGAAATGGAGCAGATGGACAACGAAATTGGCTCAACCATGGAGGAAGTGAGAGAGATTCCCACAGGAAAGTAA ATGGTTATGGGTGAGTCGATGGGGGAATTGGGTGCTAGTTCTGAGACAGGAATGGAAGAGGAATTCAGCGAAGGAGAAGAGGGATCTTTTAATTCGGATGATGTTCAGTTTACTAAAGATCAATGGAGGAGTTTTAGGGCACCATGGCGGTCGTCTCTAATCATCAAGGTCCTTGGGAGAAAGTTCGGTTACCAATTCCTTTTGCGCAGACTGTTAGCAATCTGGCGTCTGAAAGGGGAGTTTAAGCTAATAAGTCTGAGTAATGATTTCTTTATTAGCAGTGAGGCTTATAACTCATATGGGAAGGAGAATGCGGAAAGAGGACCAAATTTGCCACATGACCAGACGAATGGTAAAGGGAAAGTCAGTGATTTTATGAGATTTGGAAGTTCGAAAGGTAGCCAAGACTCAAACATATGGCAGAGCAGGAACAAAGGGATTTTTTTTGGAGGTAGAAATAGAGGTTTCGGGTCCCCGTTTGAGAACCCAGAGTTGCTGAAGTTCAATAATAATGGAGGCAGCCGAAATCCTCCATGGATGGTTGGAGATTTAGATCCAGGAGAATCAAGCTCTGATGAGGGTAATCCCCAAGACCAAGTACATAATTTCAATTTCCGAACTAAGGTTAGCAAAGAGGATTATTCTAAGGGAGACTTTGTGGACGAGGGACAATGTTCCTCGAAATCTCAGCTGAGGATTTTTATGGAAGATAGGGATGGATTGGAACTAATCAACCAAGAGTCAAACTTGGAAATGGAGCAGATGGACAACGAAATTGGCTCAACCATGGAGGAAGTGAGAGAGATTCCCACAGGAAAGTAA MVMGESMGELGASSETGMEEEFSEGEEGSFNSDDVQFTKDQWRSFRAPWRSSLIIKVLGRKFGYQFLLRRLLAIWRLKGEFKLISLSNDFFISSEAYNSYGKENAERGPNLPHDQTNGKGKVSDFMRFGSSKGSQDSNIWQSRNKGIFFGGRNRGFGSPFENPELLKFNNNGGSRNPPWMVGDLDPGESSSDEGNPQDQVHNFNFRTKVSKEDYSKGDFVDEGQCSSKSQLRIFMEDRDGLELINQESNLEMEQMDNEIGSTMEEVREIPTGK Homology
BLAST of MS025839 vs. NCBI nr
Match: XP_019183629.1 (PREDICTED: uncharacterized protein LOC109178450 [Ipomoea nil]) HSP 1 Score: 74.3 bits (181), Expect = 1.8e-09 Identity = 36/74 (48.65%), Postives = 53/74 (71.62%), Query Frame = 0
BLAST of MS025839 vs. NCBI nr
Match: XP_019186575.1 (PREDICTED: uncharacterized protein LOC109181278 [Ipomoea nil]) HSP 1 Score: 73.6 bits (179), Expect = 3.1e-09 Identity = 40/87 (45.98%), Postives = 57/87 (65.52%), Query Frame = 0
BLAST of MS025839 vs. NCBI nr
Match: XP_019182142.1 (PREDICTED: uncharacterized protein LOC109177287 [Ipomoea nil]) HSP 1 Score: 73.2 bits (178), Expect = 4.0e-09 Identity = 35/73 (47.95%), Postives = 51/73 (69.86%), Query Frame = 0
BLAST of MS025839 vs. NCBI nr
Match: XP_031120945.1 (uncharacterized protein LOC116024185 [Ipomoea triloba]) HSP 1 Score: 72.8 bits (177), Expect = 5.2e-09 Identity = 32/58 (55.17%), Postives = 44/58 (75.86%), Query Frame = 0
BLAST of MS025839 vs. NCBI nr
Match: XP_019150527.1 (PREDICTED: uncharacterized protein LOC109147321 [Ipomoea nil]) HSP 1 Score: 71.6 bits (174), Expect = 1.2e-08 Identity = 34/73 (46.58%), Postives = 51/73 (69.86%), Query Frame = 0
BLAST of MS025839 vs. ExPASy TrEMBL
Match: A0A1R3J823 (Reverse transcriptase OS=Corchorus capsularis OX=210143 GN=CCACVL1_07242 PE=4 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 4.8e-08 Identity = 32/91 (35.16%), Postives = 57/91 (62.64%), Query Frame = 0
BLAST of MS025839 vs. ExPASy TrEMBL
Match: A0A2I0HW72 (DUF4283 domain-containing protein (Fragment) OS=Punica granatum OX=22663 GN=CRG98_043654 PE=4 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 2.4e-07 Identity = 41/101 (40.59%), Postives = 58/101 (57.43%), Query Frame = 0
BLAST of MS025839 vs. ExPASy TrEMBL
Match: A0A2I0LF18 (Uncharacterized protein (Fragment) OS=Punica granatum OX=22663 GN=CRG98_000296 PE=4 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 4.0e-07 Identity = 37/79 (46.84%), Postives = 53/79 (67.09%), Query Frame = 0
BLAST of MS025839 vs. ExPASy TrEMBL
Match: A0A2I0L4T4 (uncharacterized protein LOC116196546 OS=Punica granatum OX=22663 GN=LOC116196546 PE=4 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 5.3e-07 Identity = 33/79 (41.77%), Postives = 52/79 (65.82%), Query Frame = 0
BLAST of MS025839 vs. ExPASy TrEMBL
Match: A0A6N2LZK8 (CCHC-type domain-containing protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS289963 PE=4 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 5.3e-07 Identity = 34/98 (34.69%), Postives = 59/98 (60.20%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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