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MS025496 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTATGCTTTTACTGATGCTTATGGATTACTTGCTGGATCGAACCCAAAAACGTCTCGATTTGATCGGCCTGGCCTCGGGTGGTGGATCGATCGATCTTAAGAAGATCATTGCTTACTCCTCAGTAGCCCATATGAATCTGGTGACTATTGGTATGTTTAGTCGGGCAGCGGCCGTTAGGTCACCTATTTTGAGTTATGGACATACTGGGCTCAGGGACTGCAGTCAGCCGCTTCCCCTGTAG ATGCTTATGCTTTTACTGATGCTTATGGATTACTTGCTGGATCGAACCCAAAAACGTCTCGATTTGATCGGCCTGGCCTCGGGTGGTGGATCGATCGATCTTAAGAAGATCATTGCTTACTCCTCAGTAGCCCATATGAATCTGGTGACTATTGGTATGTTTAGTCGGGCAGCGGCCGTTAGGTCACCTATTTTGAGTTATGGACATACTGGGCTCAGGGACTGCAGTCAGCCGCTTCCCCTGTAG ATGCTTATGCTTTTACTGATGCTTATGGATTACTTGCTGGATCGAACCCAAAAACGTCTCGATTTGATCGGCCTGGCCTCGGGTGGTGGATCGATCGATCTTAAGAAGATCATTGCTTACTCCTCAGTAGCCCATATGAATCTGGTGACTATTGGTATGTTTAGTCGGGCAGCGGCCGTTAGGTCACCTATTTTGAGTTATGGACATACTGGGCTCAGGGACTGCAGTCAGCCGCTTCCCCTGTAG MLMLLLMLMDYLLDRTQKRLDLIGLASGGGSIDLKKIIAYSSVAHMNLVTIGMFSRAAAVRSPILSYGHTGLRDCSQPLPL Homology
BLAST of MS025496 vs. NCBI nr
Match: KAG8369218.1 (hypothetical protein BUALT_Bualt15G0128400 [Buddleja alternifolia]) HSP 1 Score: 78.2 bits (191), Expect = 3.7e-11 Identity = 40/48 (83.33%), Postives = 42/48 (87.50%), Query Frame = 0
BLAST of MS025496 vs. NCBI nr
Match: QHS71143.1 (NADH dehydrogenase subunit 4 [Pediomelum digitatum] >QHS71144.1 NADH dehydrogenase subunit 4 [Pediomelum tenuiflorum] >QHS71145.1 NADH dehydrogenase subunit 4 [Pediomelum argophyllum] >QHS71149.1 NADH dehydrogenase subunit 4 [Pediomelum esculentum] >QHS71146.1 NADH dehydrogenase subunit 4 [Pediomelum digitatum]) HSP 1 Score: 78.2 bits (191), Expect = 3.7e-11 Identity = 41/47 (87.23%), Postives = 42/47 (89.36%), Query Frame = 0
BLAST of MS025496 vs. NCBI nr
Match: BBN68045.1 (hypothetical protein Prudu_263S000300, partial [Prunus dulcis]) HSP 1 Score: 77.8 bits (190), Expect = 4.8e-11 Identity = 39/39 (100.00%), Postives = 39/39 (100.00%), Query Frame = 0
BLAST of MS025496 vs. NCBI nr
Match: KJB09790.1 (hypothetical protein B456_001G166300 [Gossypium raimondii]) HSP 1 Score: 77.8 bits (190), Expect = 4.8e-11 Identity = 39/39 (100.00%), Postives = 39/39 (100.00%), Query Frame = 0
BLAST of MS025496 vs. NCBI nr
Match: KAB5511270.1 (hypothetical protein DKX38_030065 [Salix brachista]) HSP 1 Score: 77.8 bits (190), Expect = 4.8e-11 Identity = 39/39 (100.00%), Postives = 39/39 (100.00%), Query Frame = 0
BLAST of MS025496 vs. ExPASy Swiss-Prot
Match: P93313 (NADH-ubiquinone oxidoreductase chain 4 OS=Arabidopsis thaliana OX=3702 GN=ND4 PE=1 SV=2) HSP 1 Score: 48.9 bits (115), Expect = 3.1e-05 Identity = 24/24 (100.00%), Postives = 24/24 (100.00%), Query Frame = 0
BLAST of MS025496 vs. ExPASy Swiss-Prot
Match: Q04050 (NADH-ubiquinone oxidoreductase chain 4 OS=Brassica campestris OX=3711 GN=ND4 PE=3 SV=1) HSP 1 Score: 48.9 bits (115), Expect = 3.1e-05 Identity = 24/24 (100.00%), Postives = 24/24 (100.00%), Query Frame = 0
BLAST of MS025496 vs. ExPASy Swiss-Prot
Match: P27572 (NADH-ubiquinone oxidoreductase chain 4 OS=Triticum aestivum OX=4565 GN=ND4 PE=2 SV=2) HSP 1 Score: 48.9 bits (115), Expect = 3.1e-05 Identity = 24/24 (100.00%), Postives = 24/24 (100.00%), Query Frame = 0
BLAST of MS025496 vs. ExPASy Swiss-Prot
Match: P26848 (NADH-ubiquinone oxidoreductase chain 4 OS=Marchantia polymorpha OX=3197 GN=ND4 PE=3 SV=2) HSP 1 Score: 47.4 bits (111), Expect = 9.1e-05 Identity = 23/24 (95.83%), Postives = 23/24 (95.83%), Query Frame = 0
BLAST of MS025496 vs. ExPASy Swiss-Prot
Match: Q37617 (NADH-ubiquinone oxidoreductase chain 4 OS=Prototheca wickerhamii OX=3111 GN=ND4 PE=3 SV=1) HSP 1 Score: 46.6 bits (109), Expect = 1.6e-04 Identity = 22/25 (88.00%), Postives = 24/25 (96.00%), Query Frame = 0
BLAST of MS025496 vs. ExPASy TrEMBL
Match: A0A6C0ABE0 (NADH-ubiquinone oxidoreductase chain 4 OS=Pediomelum tenuiflorum OX=247917 PE=3 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 1.8e-11 Identity = 41/47 (87.23%), Postives = 42/47 (89.36%), Query Frame = 0
BLAST of MS025496 vs. ExPASy TrEMBL
Match: A0A6C0AAI0 (NADH-ubiquinone oxidoreductase chain 4 OS=Pediomelum digitatum OX=458362 PE=3 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 1.8e-11 Identity = 41/47 (87.23%), Postives = 42/47 (89.36%), Query Frame = 0
BLAST of MS025496 vs. ExPASy TrEMBL
Match: A0A6C0AB77 (NADH-ubiquinone oxidoreductase chain 4 OS=Pediomelum argophyllum OX=458352 PE=3 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 1.8e-11 Identity = 41/47 (87.23%), Postives = 42/47 (89.36%), Query Frame = 0
BLAST of MS025496 vs. ExPASy TrEMBL
Match: A0A6C0AAT5 (NADH-ubiquinone oxidoreductase chain 4 OS=Pediomelum esculentum OX=458363 PE=3 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 1.8e-11 Identity = 41/47 (87.23%), Postives = 42/47 (89.36%), Query Frame = 0
BLAST of MS025496 vs. ExPASy TrEMBL
Match: A0A452XEC0 (Proton_antipo_M domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 2.3e-11 Identity = 39/39 (100.00%), Postives = 39/39 (100.00%), Query Frame = 0
BLAST of MS025496 vs. TAIR 10
Match: ATMG00580.1 (NADH dehydrogenase subunit 4 ) HSP 1 Score: 48.9 bits (115), Expect = 2.2e-06 Identity = 24/24 (100.00%), Postives = 24/24 (100.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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