MS025468 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCCACCAGTTAGACTCTTCTTCGATCAAGACCCTTTGGAGTTCCAAAGACATTGGATGGTCTGTCATTGACCCTATTGGCAAATCAGGTGGCCTACTGTATTGTAAGGAAAGGAAGCATTTTTTCAAAGAATTGCAGGACCTCAAATCTCTTTGCGATGAATGTTGGTGCATAGTCGGGGATTTCAACATTATTAGACGGCCATCTGAAAGGTCCTCGTGCACAAGATTTGCAAGAGCCATGAAGAAATTCAATCAACTCATCGAGGATCTTGAGATCATAGAGATTAAATTATCAAATGGGAAGTACACATGGTCTAAGCCTGGTAATGCTTCTATTCACTCATTGCTGGACAAATTTTTTATCTCAACGGGATGGGATGTTGCACTCTCAAATTCCAAAGCTTCTCGGGCCGATCGAATTGTATTTGACCACTTCCCAATCTTTCTGGAGGCAGGGGATTTCAAATGGGGACCAAGATCATTCCGCTTTCTTTTTTTTGAACAAGATACAAACTTTTTATTGATAAATGAAAATGAACAAAATTGTTCAAAGATTCAAACTCCCATAGGAGTGAAGGTACAAGAAATAAATAAAAGTAAGCATTAGAAGAAATAAAAACCATAAACTTAAAGAAACCTCCTTAAAGGGGAATTATAAAAGCCTCCCAATTCATACAAAGCATACTAGGAGAATAAGAAGAGAAGAGGTCGGAACGAACACACCATTGGGAGGCTTTGAATTTGGCGATTGAGAAACACTCCATAGGAGATCGATTCTTGCCTTCAAATATTCGTTCATTTCTCTCAAACCATAATTCGGAAAGAAGAGCTTTTATTCCAAAAGCCTAAAGCAGATTAGTTTTAGAGCTTGCTTGCCGCCCACTGAAAAGCTGAAAAATGATTTGAGGCACCTCCAGATCCCACACCCATGAAACTCCAAACATAGATAGGAATTCCTTAATTCCGCTTTCTTAATTCATGGTTAAGCGATAAAGACTGCATCAACATTATAGAAGCCAAGCTTGCTGAGGATAGATCTTATGGCTGGGCTGTTTTCTCTCTCTCTTCTAAATTGAGAAACCTCAAATCATCTTTAAAGTCTTGGTACTCACAGAATGAGAAAAGGAGAAAAGCAGCTGAGATTCAGTTTTTAAGTCAAATTTCCTCTCTGGATATCAAGGAGGAAGAAGTCGGTCTTTCCATTGAGGAGTCCGAAAAAAGGTGCGCTCTCCAGATTGATTTGCTCAAATTGTACATTAAGAACGAGAGAAATTTATTTCAGGAAAGTAAAGTTAAATGGTTGAAAGAAGGGGACGAAAATACCAGTTTTTTCCACGCTCGTAAAAGAAAGACGTTGATCTTAGAGATTTAGAATGATCAAGGCATTTCATTGATTAATCAGAGGGATATCGAGATAGAGATTATATCATATTATGGAAAACAAAGAGCCCAAAGAAGTGGGGAGGATCTGTTCCATATATTTTTTCAATGCCCTTATGCCTTGCATTGTTGGTTGTTGCTATTCAAAGAATTCAACTTATCATGGGTCTTCAGCAATACAGCAGTGGAGAATATTCTTCAGCTACTTCTTGGCCCGATCCTGCCTCCTCAAAGGCGTTTGCCGTTTGTTGTGGTTAA ATGGCCCACCAGTTAGACTCTTCTTCGATCAAGACCCTTTGGAGTTCCAAAGACATTGGATGGTCTGTCATTGACCCTATTGGCAAATCAGGTGGCCTACTGTATTGTAAGGAAAGGAAGCATTTTTTCAAAGAATTGCAGGACCTCAAATCTCTTTGCGATGAATGTTGGTGCATAGTCGGGGATTTCAACATTATTAGACGGCCATCTGAAAGGTCCTCGTGCACAAGATTTGCAAGAGCCATGAAGAAATTCAATCAACTCATCGAGGATCTTGAGATCATAGAGATTAAATTATCAAATGGGAAGTACACATGGTCTAAGCCTGAAGCCAAGCTTGCTGAGGATAGATCTTATGGCTGGGCTGTTTTCTCTCTCTCTTCTAAATTGAGAAACCTCAAATCATCTTTAAAGTCTTGGTACTCACAGAATGAGAAAAGGAGAAAAGCAGCTGAGATTCAGTTTTTAAGTCAAATTTCCTCTCTGGATATCAAGGAGGAAGAAGTCGGTCTTTCCATTGAGGAGTCCGAAAAAAGAATTCAACTTATCATGGGTCTTCAGCAATACAGCAGTGGAGAATATTCTTCAGCTACTTCTTGGCCCGATCCTGCCTCCTCAAAGGCGTTTGCCGTTTGTTGTGGTTAA ATGGCCCACCAGTTAGACTCTTCTTCGATCAAGACCCTTTGGAGTTCCAAAGACATTGGATGGTCTGTCATTGACCCTATTGGCAAATCAGGTGGCCTACTGTATTGTAAGGAAAGGAAGCATTTTTTCAAAGAATTGCAGGACCTCAAATCTCTTTGCGATGAATGTTGGTGCATAGTCGGGGATTTCAACATTATTAGACGGCCATCTGAAAGGTCCTCGTGCACAAGATTTGCAAGAGCCATGAAGAAATTCAATCAACTCATCGAGGATCTTGAGATCATAGAGATTAAATTATCAAATGGGAAGTACACATGGTCTAAGCCTGAAGCCAAGCTTGCTGAGGATAGATCTTATGGCTGGGCTGTTTTCTCTCTCTCTTCTAAATTGAGAAACCTCAAATCATCTTTAAAGTCTTGGTACTCACAGAATGAGAAAAGGAGAAAAGCAGCTGAGATTCAGTTTTTAAGTCAAATTTCCTCTCTGGATATCAAGGAGGAAGAAGTCGGTCTTTCCATTGAGGAGTCCGAAAAAAGAATTCAACTTATCATGGGTCTTCAGCAATACAGCAGTGGAGAATATTCTTCAGCTACTTCTTGGCCCGATCCTGCCTCCTCAAAGGCGTTTGCCGTTTGTTGTGGTTAA MAHQLDSSSIKTLWSSKDIGWSVIDPIGKSGGLLYCKERKHFFKELQDLKSLCDECWCIVGDFNIIRRPSERSSCTRFARAMKKFNQLIEDLEIIEIKLSNGKYTWSKPEAKLAEDRSYGWAVFSLSSKLRNLKSSLKSWYSQNEKRRKAAEIQFLSQISSLDIKEEEVGLSIEESEKRIQLIMGLQQYSSGEYSSATSWPDPASSKAFAVCCG Homology
BLAST of MS025468 vs. NCBI nr
Match: XP_022154822.1 (uncharacterized protein LOC111021983 [Momordica charantia]) HSP 1 Score: 103.2 bits (256), Expect = 2.8e-18 Identity = 45/105 (42.86%), Postives = 70/105 (66.67%), Query Frame = 0
BLAST of MS025468 vs. NCBI nr
Match: KAA0038339.1 (uncharacterized protein E6C27_scaffold270G002130 [Cucumis melo var. makuwa]) HSP 1 Score: 97.1 bits (240), Expect = 2.0e-16 Identity = 57/169 (33.73%), Postives = 87/169 (51.48%), Query Frame = 0
BLAST of MS025468 vs. NCBI nr
Match: TYJ97056.1 (uncharacterized protein E5676_scaffold506G001240 [Cucumis melo var. makuwa]) HSP 1 Score: 95.9 bits (237), Expect = 4.5e-16 Identity = 56/169 (33.14%), Postives = 87/169 (51.48%), Query Frame = 0
BLAST of MS025468 vs. NCBI nr
Match: RVW68817.1 (hypothetical protein CK203_062237 [Vitis vinifera]) HSP 1 Score: 89.7 bits (221), Expect = 3.2e-14 Identity = 58/199 (29.15%), Postives = 100/199 (50.25%), Query Frame = 0
BLAST of MS025468 vs. NCBI nr
Match: RVX13972.1 (putative ribonuclease H protein [Vitis vinifera]) HSP 1 Score: 88.2 bits (217), Expect = 9.4e-14 Identity = 58/215 (26.98%), Postives = 104/215 (48.37%), Query Frame = 0
BLAST of MS025468 vs. ExPASy TrEMBL
Match: A0A6J1DMQ9 (uncharacterized protein LOC111021983 OS=Momordica charantia OX=3673 GN=LOC111021983 PE=4 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 1.4e-18 Identity = 45/105 (42.86%), Postives = 70/105 (66.67%), Query Frame = 0
BLAST of MS025468 vs. ExPASy TrEMBL
Match: A0A5A7TAF5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold270G002130 PE=4 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 9.8e-17 Identity = 57/169 (33.73%), Postives = 87/169 (51.48%), Query Frame = 0
BLAST of MS025468 vs. ExPASy TrEMBL
Match: A0A5D3BDI9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold506G001240 PE=4 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 2.2e-16 Identity = 56/169 (33.14%), Postives = 87/169 (51.48%), Query Frame = 0
BLAST of MS025468 vs. ExPASy TrEMBL
Match: A0A2N9FLJ2 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS15486 PE=3 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 1.1e-15 Identity = 64/219 (29.22%), Postives = 103/219 (47.03%), Query Frame = 0
BLAST of MS025468 vs. ExPASy TrEMBL
Match: A0A2N9FB74 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS12260 PE=4 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 1.2e-14 Identity = 40/117 (34.19%), Postives = 65/117 (55.56%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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