MS025079 (gene) Bitter gourd (TR) v1

Overview


Name	MS025079
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Unknown protein
Location	scaffold404: 711233 .. 711511 (+)
RNA-Seq Expression	MS025079
Synteny	MS025079

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGCGTCCTCGTCGTAGGCGCAATCAAGCACAGCCAAATGAAGAAGTTCAAGAAGAAGCACAAGAAGCTGAACAAGTTCAGGAACAAAATGAAGATGCTATAGGAGATGAACAGATTATGAATACTCCTATACAATCACATTTTCTAATGATTCCTACACCAGGAGTTCATTTAGACACCGCATCTACTTCAGCTCTTCAACCTGACCCATCACCTGTTCAACAAGAACCTCGTCGTGGACGTCGCGTAAGAAGGCCACGACAATGTGGTACATGA

mRNA sequence

ATGAGGCGTCCTCGTCGTAGGCGCAATCAAGCACAGCCAAATGAAGAAGTTCAAGAAGAAGCACAAGAAGCTGAACAAGTTCAGGAACAAAATGAAGATGCTATAGGAGATGAACAGATTATGAATACTCCTATACAATCACATTTTCTAATGATTCCTACACCAGGAGTTCATTTAGACACCGCATCTACTTCAGCTCTTCAACCTGACCCATCACCTGTTCAACAAGAACCTCGTCGTGGACGTCGCGTAAGAAGGCCACGACAATGTGGTACATGA

Coding sequence (CDS)

ATGAGGCGTCCTCGTCGTAGGCGCAATCAAGCACAGCCAAATGAAGAAGTTCAAGAAGAAGCACAAGAAGCTGAACAAGTTCAGGAACAAAATGAAGATGCTATAGGAGATGAACAGATTATGAATACTCCTATACAATCACATTTTCTAATGATTCCTACACCAGGAGTTCATTTAGACACCGCATCTACTTCAGCTCTTCAACCTGACCCATCACCTGTTCAACAAGAACCTCGTCGTGGACGTCGCGTAAGAAGGCCACGACAATGTGGTACATGA

Protein sequence

MRRPRRRRNQAQPNEEVQEEAQEAEQVQEQNEDAIGDEQIMNTPIQSHFLMIPTPGVHLDTASTSALQPDPSPVQQEPRRGRRVRRPRQCGT

Homology

The following BLAST results are available for this feature:

BLAST of MS025079 vs.


Match Name	E-value	Identity	Description

BLAST of MS025079 vs.


Match Name	E-value	Identity	Description

BLAST of MS025079 vs.


Match Name	E-value	Identity	Description

BLAST of MS025079 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 14..37
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..72
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..92

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS025079.1	MS025079.1	mRNA