MS024683 (gene) Bitter gourd (TR) v1

Overview


Name	MS024683
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	TCP family transcription factor
Location	scaffold92: 2032347 .. 2033114 (-)
RNA-Seq Expression	MS024683
Synteny	MS024683

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGAATTCCGAAACCCCCAATAACGGCGTCTCCCAAAAGCCGCCGCCCTCTGCAACCAACGGAGCTCTCGCCGTCAAGAAGCCGCCGTCCAAGGACCGCCACAGCAAGGTTGACGGCCGTGGCCGCCGCATCCGTATGCCCATCATCTGCGCCGCCCGTGTTTTCCAGCTCACCCGCGAACTCGGCCTCAAATCCGACGGCCAGACCATCGAGTGGCTCCTCCGCCACGCCGAGCCCTCCATTATCGCCGCCACCGGCACTGGCACCACCCCGGCTAACTTCTCCTCCGTCGCCGTCTCCGTCAGGGGAAACAACGCCGGCTCCACTTCCCTCTCTTCCCCTTCTTCCACTACCTCCACGCTCTCCCTCTCCCGCCCCCAGCCTCTCTCCGGCCCCGCGCCGTTTATTCTCGGGAAGCGCGTCCGGTCCGACGATGACGCCGGCGGCGCCAAGGATGACGGGTTGGGCGTGGGTCCGACGGTTGGGTCCTTAGTGGGTCAGACGGGGCCGGGTGGGTACTGGGCGATTCCGGCAAGGCCGGACTACGGCCAGGTGTGGAGTTTCGCGGCGGCGGCGGCGGCTCCGTCGGAGATGGTGGTTCAACCGGGGGCGATTTCGCAGCAAGCGTCGTTGTTTTCTCAACAGCAGCAGCCGATTAGAGAGGCGTCGGCGGCGAGGGTGGGGAATTACCTTCCCGGACATCTGAATTTGCTGGCTTCTTTGTCCGGCGGAAGCTCCGGCCGGCGGGAAGATGACCCTCGCTAA

mRNA sequence

ATGTCGAATTCCGAAACCCCCAATAACGGCGTCTCCCAAAAGCCGCCGCCCTCTGCAACCAACGGAGCTCTCGCCGTCAAGAAGCCGCCGTCCAAGGACCGCCACAGCAAGGTTGACGGCCGTGGCCGCCGCATCCGTATGCCCATCATCTGCGCCGCCCGTGTTTTCCAGCTCACCCGCGAACTCGGCCTCAAATCCGACGGCCAGACCATCGAGTGGCTCCTCCGCCACGCCGAGCCCTCCATTATCGCCGCCACCGGCACTGGCACCACCCCGGCTAACTTCTCCTCCGTCGCCGTCTCCGTCAGGGGAAACAACGCCGGCTCCACTTCCCTCTCTTCCCCTTCTTCCACTACCTCCACGCTCTCCCTCTCCCGCCCCCAGCCTCTCTCCGGCCCCGCGCCGTTTATTCTCGGGAAGCGCGTCCGGTCCGACGATGACGCCGGCGGCGCCAAGGATGACGGGTTGGGCGTGGGTCCGACGGTTGGGTCCTTAGTGGGTCAGACGGGGCCGGGTGGGTACTGGGCGATTCCGGCAAGGCCGGACTACGGCCAGGTGTGGAGTTTCGCGGCGGCGGCGGCGGCTCCGTCGGAGATGGTGGTTCAACCGGGGGCGATTTCGCAGCAAGCGTCGTTGTTTTCTCAACAGCAGCAGCCGATTAGAGAGGCGTCGGCGGCGAGGGTGGGGAATTACCTTCCCGGACATCTGAATTTGCTGGCTTCTTTGTCCGGCGGAAGCTCCGGCCGGCGGGAAGATGACCCTCGCTAA

Coding sequence (CDS)

ATGTCGAATTCCGAAACCCCCAATAACGGCGTCTCCCAAAAGCCGCCGCCCTCTGCAACCAACGGAGCTCTCGCCGTCAAGAAGCCGCCGTCCAAGGACCGCCACAGCAAGGTTGACGGCCGTGGCCGCCGCATCCGTATGCCCATCATCTGCGCCGCCCGTGTTTTCCAGCTCACCCGCGAACTCGGCCTCAAATCCGACGGCCAGACCATCGAGTGGCTCCTCCGCCACGCCGAGCCCTCCATTATCGCCGCCACCGGCACTGGCACCACCCCGGCTAACTTCTCCTCCGTCGCCGTCTCCGTCAGGGGAAACAACGCCGGCTCCACTTCCCTCTCTTCCCCTTCTTCCACTACCTCCACGCTCTCCCTCTCCCGCCCCCAGCCTCTCTCCGGCCCCGCGCCGTTTATTCTCGGGAAGCGCGTCCGGTCCGACGATGACGCCGGCGGCGCCAAGGATGACGGGTTGGGCGTGGGTCCGACGGTTGGGTCCTTAGTGGGTCAGACGGGGCCGGGTGGGTACTGGGCGATTCCGGCAAGGCCGGACTACGGCCAGGTGTGGAGTTTCGCGGCGGCGGCGGCGGCTCCGTCGGAGATGGTGGTTCAACCGGGGGCGATTTCGCAGCAAGCGTCGTTGTTTTCTCAACAGCAGCAGCCGATTAGAGAGGCGTCGGCGGCGAGGGTGGGGAATTACCTTCCCGGACATCTGAATTTGCTGGCTTCTTTGTCCGGCGGAAGCTCCGGCCGGCGGGAAGATGACCCTCGCTAA

Protein sequence

MSNSETPNNGVSQKPPPSATNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGLKSDGQTIEWLLRHAEPSIIAATGTGTTPANFSSVAVSVRGNNAGSTSLSSPSSTTSTLSLSRPQPLSGPAPFILGKRVRSDDDAGGAKDDGLGVGPTVGSLVGQTGPGGYWAIPARPDYGQVWSFAAAAAAPSEMVVQPGAISQQASLFSQQQQPIREASAARVGNYLPGHLNLLASLSGGSSGRREDDPR

Homology

[Close]

BLAST of MS024683 vs. NCBI nr
Match: XP_004143620.1 (transcription factor TCP7 [Cucumis sativus] >KGN50442.1 hypothetical protein Csa_000312 [Cucumis sativus])

HSP 1 Score: 395.2 bits (1014), Expect = 4.3e-106
Identity = 220/261 (84.29%), Postives = 229/261 (87.74%), Query Frame = 0


Query: 1   MSNSETPN---NG--VSQKPPPSATNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARV 60
           MSNS+  N   NG  +      S++NGAL VKKPPSKDRHSKVDGRGRRIRMPIICAARV
Sbjct: 1   MSNSDHTNGVSNGATIDTHKNHSSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAARV 60

Query: 61  FQLTRELGLKSDGQTIEWLLRHAEPSIIAATGTGTTPANFSSVAVSVRGNNAGSTSLSSP 120
           FQLTRELG KSDGQTIEWLLR AEPSIIAATGTGTTPANFSSV++SVRGN  GS SLSSP
Sbjct: 61  FQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGGSASLSSP 120

Query: 121 SSTTSTLSLSRPQPLSGPAPFILGKRVRSDDDAGGAKDDGLGVGPTVGSLVGQTGPGGYW 180
           SSTTSTLSLSRPQPLSGP PFILGKRVRSDDD   AKDD LGVG  VGS+VG TGPGGYW
Sbjct: 121 SSTTSTLSLSRPQPLSGPTPFILGKRVRSDDD---AKDDALGVGQAVGSIVGPTGPGGYW 180

Query: 181 AIPARPDYGQVWSFAAAAAAPSEMVVQPGAISQQASLFSQQQQPIREASAARVGNYLPGH 240
           AIPARPDYGQVWSF  AAAAPSEMVVQPG I+QQASLF+QQQQPIREASAARVGNYLPGH
Sbjct: 181 AIPARPDYGQVWSF--AAAAPSEMVVQPGGIAQQASLFAQQQQPIREASAARVGNYLPGH 240

Query: 241 LNLLASLS-GGSSGRREDDPR 256
           LNLLASLS GG SGRREDDPR
Sbjct: 241 LNLLASLSGGGGSGRREDDPR 256

[Close]

BLAST of MS024683 vs. NCBI nr
Match: XP_008445886.1 (PREDICTED: transcription factor TCP7-like [Cucumis melo] >KAA0034075.1 transcription factor TCP7-like [Cucumis melo var. makuwa])

HSP 1 Score: 394.4 bits (1012), Expect = 7.3e-106
Identity = 219/261 (83.91%), Postives = 227/261 (86.97%), Query Frame = 0


Query: 1   MSNSETPNN-----GVSQKPPPSATNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARV 60
           MSNS+  N       +      S++NGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARV
Sbjct: 1   MSNSDHTNGVSNAAAIDSHKNQSSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARV 60

Query: 61  FQLTRELGLKSDGQTIEWLLRHAEPSIIAATGTGTTPANFSSVAVSVRGNNAGSTSLSSP 120
           FQLTRELG KSDGQTIEWLLR AEPSIIAATGTGTTPANFSSV++SVRGN  GS SLSSP
Sbjct: 61  FQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGGSASLSSP 120

Query: 121 SSTTSTLSLSRPQPLSGPAPFILGKRVRSDDDAGGAKDDGLGVGPTVGSLVGQTGPGGYW 180
           SSTTSTLSLSRPQ LSGP PFILGKRVRSDDD   AKDDGLGVG  VGS+VG TGPGGYW
Sbjct: 121 SSTTSTLSLSRPQALSGPTPFILGKRVRSDDD---AKDDGLGVGQAVGSIVGPTGPGGYW 180

Query: 181 AIPARPDYGQVWSFAAAAAAPSEMVVQPGAISQQASLFSQQQQPIREASAARVGNYLPGH 240
           AIPARPDYGQVWSF  AAAAPSEMVVQ G ISQQASLF+QQQQPIREASAARVGNYLPGH
Sbjct: 181 AIPARPDYGQVWSF--AAAAPSEMVVQQGGISQQASLFAQQQQPIREASAARVGNYLPGH 240

Query: 241 LNLLASLS-GGSSGRREDDPR 256
           LNLLASLS GG SGRREDDPR
Sbjct: 241 LNLLASLSGGGGSGRREDDPR 256

[Close]

BLAST of MS024683 vs. NCBI nr
Match: XP_038893054.1 (transcription factor TCP7-like [Benincasa hispida])

HSP 1 Score: 388.3 bits (996), Expect = 5.2e-104
Identity = 221/267 (82.77%), Postives = 228/267 (85.39%), Query Frame = 0


Query: 1   MSNSE--TPNNGVS---------QKPPPSATNGALAVKKPPSKDRHSKVDGRGRRIRMPI 60
           MSNS+  T  NGVS          K  PS TNGAL VKKPPSKDRHSKVDGRGRRIRMPI
Sbjct: 1   MSNSDHTTNANGVSNGTIVAIDTHKNQPS-TNGALVVKKPPSKDRHSKVDGRGRRIRMPI 60

Query: 61  ICAARVFQLTRELGLKSDGQTIEWLLRHAEPSIIAATGTGTTPANFSSVAVSVRGNNAGS 120
           ICAARVFQLTRELG KSDGQTIEWLLR AEPSIIAATGTGTTPANFSSV++SVRGN    
Sbjct: 61  ICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSV 120

Query: 121 TSLSSPSSTTSTLSLSRPQPLSGPAPFILGKRVRSDDDAGGAKDDGLGVGPTVGSLVGQT 180
           +SLSSPSSTTSTLSLSRPQ LSGP PFILGKRVRSDDD    KDDGLGVG  VGS+VG T
Sbjct: 121 SSLSSPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDD---GKDDGLGVGQAVGSIVGPT 180

Query: 181 GPGGYWAIPARPDYGQVWSFAAAAAAPSEMVVQPGAISQQASLFSQQQQPIREASAARVG 240
           GPGGYWAIPARPDYGQVWSF  AAAAPSEMVVQPG ISQ +SLF+QQQQPIREASAARVG
Sbjct: 181 GPGGYWAIPARPDYGQVWSF--AAAAPSEMVVQPGGISQHSSLFAQQQQPIREASAARVG 240

Query: 241 NYLPGHLNLLASLS-GGSSGRREDDPR 256
           NYLPGHLNLLASLS GG SGRREDDPR
Sbjct: 241 NYLPGHLNLLASLSGGGGSGRREDDPR 261

[Close]

BLAST of MS024683 vs. NCBI nr
Match: XP_022999463.1 (transcription factor TCP7-like [Cucurbita maxima])

HSP 1 Score: 380.6 bits (976), Expect = 1.1e-101
Identity = 221/264 (83.71%), Postives = 227/264 (85.98%), Query Frame = 0


Query: 1   MSNSETPN-NGVS-------QKPPPSATNGALAVKKPPSKDRHSKVDGRGRRIRMPIICA 60
           MSNS++ N NGVS        K  PS +NGAL VKKPPSKDRHSKVDGRGRRIRMPIICA
Sbjct: 1   MSNSDSGNTNGVSNGAAIDTHKNQPS-SNGALVVKKPPSKDRHSKVDGRGRRIRMPIICA 60

Query: 61  ARVFQLTRELGLKSDGQTIEWLLRHAEPSIIAATGTGTTPANFSSVAVSVRGNNAGSTSL 120
           ARVFQLTRELG KSDGQTIEWLLR AEPSIIAATGTGTTPANFSSV++SVRG N GSTSL
Sbjct: 61  ARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRG-NGGSTSL 120

Query: 121 SSPSSTTSTLSLSRPQPLSGPAPFILGKRVRSDDDAGGAKDDGLGVGPTVGSLVGQTGPG 180
           SSPSSTTSTLSLSRPQ LSGP PFILGKRVRSDDD  G KDDG GVGP        TGPG
Sbjct: 121 SSPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDD--GGKDDGTGVGP--------TGPG 180

Query: 181 GYWAIPARPDYGQVWSFAAAAAAPSEMVVQPGAISQQASLFSQQQQPIREASAARVGNYL 240
           GYWAIPARPDYGQVWSF  AAAAPSEMVVQPG ISQQASLF+QQQQPIREASAARVGNYL
Sbjct: 181 GYWAIPARPDYGQVWSF--AAAAPSEMVVQPGGISQQASLFAQQQQPIREASAARVGNYL 240

Query: 241 PGHLNLLASLS-GGSSGRREDDPR 256
           PGHLNLLASLS GG SGRREDDPR
Sbjct: 241 PGHLNLLASLSGGGGSGRREDDPR 250

[Close]

BLAST of MS024683 vs. NCBI nr
Match: XP_022957369.1 (transcription factor TCP7-like [Cucurbita moschata])

HSP 1 Score: 375.9 bits (964), Expect = 2.7e-100
Identity = 219/264 (82.95%), Postives = 225/264 (85.23%), Query Frame = 0


Query: 1   MSNSETPN-NGVS-------QKPPPSATNGALAVKKPPSKDRHSKVDGRGRRIRMPIICA 60
           MSNS++ N NGVS        K  PS +NGAL VKKPPSKDRHSKVDGRGRRIRMPIICA
Sbjct: 81  MSNSDSGNTNGVSNGAAVDTHKNQPS-SNGALVVKKPPSKDRHSKVDGRGRRIRMPIICA 140

Query: 61  ARVFQLTRELGLKSDGQTIEWLLRHAEPSIIAATGTGTTPANFSSVAVSVRGNNAGSTSL 120
           ARVFQLTRELG KSDGQTIEWLLR AEPSIIAATGTGTTPANFSSV++SVRG N GSTSL
Sbjct: 141 ARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRG-NGGSTSL 200

Query: 121 SSPSSTTSTLSLSRPQPLSGPAPFILGKRVRSDDDAGGAKDDGLGVGPTVGSLVGQTGPG 180
           SSPSSTTSTLSLSRPQ LSGP PFILGKRVRSDDD  G KDDG GVGP        TGPG
Sbjct: 201 SSPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDD--GGKDDGAGVGP--------TGPG 260

Query: 181 GYWAIPARPDYGQVWSFAAAAAAPSEMVVQPGAISQQASLFSQQQQPIREASAARVGNYL 240
           GYWAIPARPDYGQVWSF  AAAAPSEMVVQPG ISQQASLF+Q QQPIREASAARVGNYL
Sbjct: 261 GYWAIPARPDYGQVWSF--AAAAPSEMVVQPGGISQQASLFAQPQQPIREASAARVGNYL 320

Query: 241 PGHLNLLASLS-GGSSGRREDDPR 256
           P HLNLLASLS GG SGRREDDPR
Sbjct: 321 PSHLNLLASLSGGGGSGRREDDPR 330

[Close]

BLAST of MS024683 vs. ExPASy Swiss-Prot
Match: Q9FMX2 (Transcription factor TCP7 OS=Arabidopsis thaliana OX=3702 GN=TCP7 PE=1 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 6.5e-65
Identity = 157/266 (59.02%), Postives = 181/266 (68.05%), Query Frame = 0


Query: 3   NSETPNNGVSQKPPPSATNGAL-------AVKKPPSKDRHSKVDGRGRRIRMPIICAARV 62
           N+   NN  +      ++NGAL        VKKPP+KDRHSKVDGRGRRIRMPIICAARV
Sbjct: 4   NNNNNNNNNNNDGLMISSNGALIEQQPSVVVKKPPAKDRHSKVDGRGRRIRMPIICAARV 63

Query: 63  FQLTRELGLKSDGQTIEWLLRHAEPSIIAATGTGTTPANFSSVAVSVRGNNAGSTSLSSP 122
           FQLTRELG KSDGQTIEWLLR AEPSIIAATGTGTTPA+FS+ +VS+RG    STSL   
Sbjct: 64  FQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTASVSIRG-ATNSTSLDHK 123

Query: 123 SSTTSTLSLSRPQPLSGPAPFILGKRVRSDDDAGGAKD-DGLGVGPTVGSLVGQTGPGGY 182
            ++           L G +PFILGKRVR+D+D+  + +   +G   T       T P G+
Sbjct: 124 PTSL----------LGGTSPFILGKRVRADEDSNNSHNHSSVGKDETF-----TTTPAGF 183

Query: 183 WAIPARPDYGQVWSFAAAAAAPSEMVVQPGAISQQASLFSQQQQ---PIREASAARVGNY 242
           WA+PARPD+GQVWSF   A AP EM +Q     QQ     QQQQ    + EASAARVGNY
Sbjct: 184 WAVPARPDFGQVWSF---AGAPQEMFLQQQHHHQQPLFVHQQQQQQAAMGEASAARVGNY 243

Query: 243 LPGHLNLLASLSGGSSG--RREDDPR 256
           LPGHLNLLASLSGGS G  RRE+DPR
Sbjct: 244 LPGHLNLLASLSGGSPGSDRREEDPR 250

[Close]

BLAST of MS024683 vs. ExPASy Swiss-Prot
Match: Q9FTA2 (Transcription factor TCP21 OS=Arabidopsis thaliana OX=3702 GN=TCP21 PE=1 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 1.7e-60
Identity = 150/245 (61.22%), Postives = 165/245 (67.35%), Query Frame = 0


Query: 25  AVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGLKSDGQTIEWLLRHAEPSIIA 84
           AVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELG KSDGQTIEWLLR AEPSIIA
Sbjct: 25  AVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIA 84

Query: 85  ATGTGTTPANFSSVAVSVRGNNAGSTSLSSPSSTTSTLSLSRPQPLSGPAPFILGKRV-- 144
           ATGTGTTPA+FS+ +                              LS  +PF LGKRV  
Sbjct: 85  ATGTGTTPASFSTAS------------------------------LSTSSPFTLGKRVVR 144

Query: 145 RSDDDAGGAKDDGLGVGPTVG-SLVGQTGPGGYWAIPARPDYGQVWSFAAAAAAPSEMVV 204
             + ++GG    GL VG T+G SL+G  G GG+WA+PARPD+GQVWSF  A  AP EMV 
Sbjct: 145 AEEGESGGGGGGGLTVGHTMGTSLMGGGGSGGFWAVPARPDFGQVWSF--ATGAPPEMVF 204

Query: 205 QPGAISQQASLF---SQQQQ-------PIREASAARVGNYLPG-HLNLLASLSGGS--SG 254
                 Q A+LF    QQQQ        + EASAARVGNYLPG HLNLLASLSGG+  SG
Sbjct: 205 --AQQQQPATLFVRHQQQQQASAAAAAAMGEASAARVGNYLPGHHLNLLASLSGGANGSG 235

[Close]

BLAST of MS024683 vs. ExPASy Swiss-Prot
Match: Q93Z00 (Transcription factor TCP14 OS=Arabidopsis thaliana OX=3702 GN=TCP14 PE=1 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 9.8e-29
Identity = 78/146 (53.42%), Postives = 96/146 (65.75%), Query Frame = 0


Query: 4   SETPNNGVSQKPPPSAT----------NGALAVKKPP-----SKDRHSKVDGRGRRIRMP 63
           S++     SQK  P  T          +  +A KKPP     +KDRH+KVDGRGRRIRMP
Sbjct: 75  SQSQPQSQSQKSQPQTTQKELLQTQEESAVVAAKKPPLKRASTKDRHTKVDGRGRRIRMP 134

Query: 64  IICAARVFQLTRELGLKSDGQTIEWLLRHAEPSIIAATGTGTTPANFSSVAVSVRGNNAG 123
            +CAARVFQLTRELG KSDG+TIEWLL+ AEPS+IAATGTGT PANF+S+ +S+R   + 
Sbjct: 135 ALCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAATGTGTIPANFTSLNISLR---SS 194

Query: 124 STSLSSPSSTTSTLSLSRPQPLSGPA 135
            +S+S PS   S  S   P  +  PA
Sbjct: 195 GSSMSLPSHFRSAASTFSPNNIFSPA 217

[Close]

BLAST of MS024683 vs. ExPASy Swiss-Prot
Match: Q53PH2 (Transcription factor PCF3 OS=Oryza sativa subsp. japonica OX=39947 GN=PCF3 PE=2 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 8.3e-28
Identity = 65/93 (69.89%), Postives = 78/93 (83.87%), Query Frame = 0


Query: 19  ATNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGLKSDGQTIEWLLRHA 78
           A   A A  K P+KDRH+KV+GRGRRIRMP +CAARVFQLTRELG K+DG+TIEWLL+ A
Sbjct: 140 AVVAAGAGAKRPTKDRHTKVEGRGRRIRMPALCAARVFQLTRELGHKTDGETIEWLLQQA 199

Query: 79  EPSIIAATGTGTTPANFSSVAVSVRGNNAGSTS 112
           EP+I+AATGTGT PANFSS+AVS+R   + S+S
Sbjct: 200 EPAIVAATGTGTIPANFSSLAVSLRSAASHSSS 232

[Close]

BLAST of MS024683 vs. ExPASy Swiss-Prot
Match: Q9LQF0 (Transcription factor TCP23 OS=Arabidopsis thaliana OX=3702 GN=TCP23 PE=1 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 3.1e-27
Identity = 72/105 (68.57%), Postives = 82/105 (78.10%), Query Frame = 0


Query: 16  PPSATNGALAVKKP---PSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGLKSDGQTIE 75
           P S T    A K P   PSKDRH KVDGRGRRIRMP ICAARVFQLTREL  KSDG+TIE
Sbjct: 37  PNSTTTTVTAAKTPAKRPSKDRHIKVDGRGRRIRMPAICAARVFQLTRELQHKSDGETIE 96

Query: 76  WLLRHAEPSIIAATGTGTTPANFSSVAVSVRGNNAGSTSLSSPSS 118
           WLL+ AEP+IIAATGTGT PAN S++ +S+R  ++GST LS+P S
Sbjct: 97  WLLQQAEPAIIAATGTGTIPANISTLNISLR--SSGST-LSAPLS 138

[Close]

BLAST of MS024683 vs. ExPASy TrEMBL
Match: A0A0A0KPX7 (TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G175170 PE=4 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 2.1e-106
Identity = 220/261 (84.29%), Postives = 229/261 (87.74%), Query Frame = 0


Query: 1   MSNSETPN---NG--VSQKPPPSATNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARV 60
           MSNS+  N   NG  +      S++NGAL VKKPPSKDRHSKVDGRGRRIRMPIICAARV
Sbjct: 1   MSNSDHTNGVSNGATIDTHKNHSSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAARV 60

Query: 61  FQLTRELGLKSDGQTIEWLLRHAEPSIIAATGTGTTPANFSSVAVSVRGNNAGSTSLSSP 120
           FQLTRELG KSDGQTIEWLLR AEPSIIAATGTGTTPANFSSV++SVRGN  GS SLSSP
Sbjct: 61  FQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGGSASLSSP 120

Query: 121 SSTTSTLSLSRPQPLSGPAPFILGKRVRSDDDAGGAKDDGLGVGPTVGSLVGQTGPGGYW 180
           SSTTSTLSLSRPQPLSGP PFILGKRVRSDDD   AKDD LGVG  VGS+VG TGPGGYW
Sbjct: 121 SSTTSTLSLSRPQPLSGPTPFILGKRVRSDDD---AKDDALGVGQAVGSIVGPTGPGGYW 180

Query: 181 AIPARPDYGQVWSFAAAAAAPSEMVVQPGAISQQASLFSQQQQPIREASAARVGNYLPGH 240
           AIPARPDYGQVWSF  AAAAPSEMVVQPG I+QQASLF+QQQQPIREASAARVGNYLPGH
Sbjct: 181 AIPARPDYGQVWSF--AAAAPSEMVVQPGGIAQQASLFAQQQQPIREASAARVGNYLPGH 240

Query: 241 LNLLASLS-GGSSGRREDDPR 256
           LNLLASLS GG SGRREDDPR
Sbjct: 241 LNLLASLSGGGGSGRREDDPR 256

[Close]

BLAST of MS024683 vs. ExPASy TrEMBL
Match: A0A5A7SY02 (Transcription factor TCP7-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00630 PE=4 SV=1)

HSP 1 Score: 394.4 bits (1012), Expect = 3.5e-106
Identity = 219/261 (83.91%), Postives = 227/261 (86.97%), Query Frame = 0


Query: 1   MSNSETPNN-----GVSQKPPPSATNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARV 60
           MSNS+  N       +      S++NGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARV
Sbjct: 1   MSNSDHTNGVSNAAAIDSHKNQSSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARV 60

Query: 61  FQLTRELGLKSDGQTIEWLLRHAEPSIIAATGTGTTPANFSSVAVSVRGNNAGSTSLSSP 120
           FQLTRELG KSDGQTIEWLLR AEPSIIAATGTGTTPANFSSV++SVRGN  GS SLSSP
Sbjct: 61  FQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGGSASLSSP 120

Query: 121 SSTTSTLSLSRPQPLSGPAPFILGKRVRSDDDAGGAKDDGLGVGPTVGSLVGQTGPGGYW 180
           SSTTSTLSLSRPQ LSGP PFILGKRVRSDDD   AKDDGLGVG  VGS+VG TGPGGYW
Sbjct: 121 SSTTSTLSLSRPQALSGPTPFILGKRVRSDDD---AKDDGLGVGQAVGSIVGPTGPGGYW 180

Query: 181 AIPARPDYGQVWSFAAAAAAPSEMVVQPGAISQQASLFSQQQQPIREASAARVGNYLPGH 240
           AIPARPDYGQVWSF  AAAAPSEMVVQ G ISQQASLF+QQQQPIREASAARVGNYLPGH
Sbjct: 181 AIPARPDYGQVWSF--AAAAPSEMVVQQGGISQQASLFAQQQQPIREASAARVGNYLPGH 240

Query: 241 LNLLASLS-GGSSGRREDDPR 256
           LNLLASLS GG SGRREDDPR
Sbjct: 241 LNLLASLSGGGGSGRREDDPR 256

[Close]

BLAST of MS024683 vs. ExPASy TrEMBL
Match: A0A1S3BDR1 (transcription factor TCP7-like OS=Cucumis melo OX=3656 GN=LOC103488772 PE=4 SV=1)

HSP 1 Score: 394.4 bits (1012), Expect = 3.5e-106
Identity = 219/261 (83.91%), Postives = 227/261 (86.97%), Query Frame = 0


Query: 1   MSNSETPNN-----GVSQKPPPSATNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARV 60
           MSNS+  N       +      S++NGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARV
Sbjct: 1   MSNSDHTNGVSNAAAIDSHKNQSSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARV 60

Query: 61  FQLTRELGLKSDGQTIEWLLRHAEPSIIAATGTGTTPANFSSVAVSVRGNNAGSTSLSSP 120
           FQLTRELG KSDGQTIEWLLR AEPSIIAATGTGTTPANFSSV++SVRGN  GS SLSSP
Sbjct: 61  FQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGGSASLSSP 120

Query: 121 SSTTSTLSLSRPQPLSGPAPFILGKRVRSDDDAGGAKDDGLGVGPTVGSLVGQTGPGGYW 180
           SSTTSTLSLSRPQ LSGP PFILGKRVRSDDD   AKDDGLGVG  VGS+VG TGPGGYW
Sbjct: 121 SSTTSTLSLSRPQALSGPTPFILGKRVRSDDD---AKDDGLGVGQAVGSIVGPTGPGGYW 180

Query: 181 AIPARPDYGQVWSFAAAAAAPSEMVVQPGAISQQASLFSQQQQPIREASAARVGNYLPGH 240
           AIPARPDYGQVWSF  AAAAPSEMVVQ G ISQQASLF+QQQQPIREASAARVGNYLPGH
Sbjct: 181 AIPARPDYGQVWSF--AAAAPSEMVVQQGGISQQASLFAQQQQPIREASAARVGNYLPGH 240

Query: 241 LNLLASLS-GGSSGRREDDPR 256
           LNLLASLS GG SGRREDDPR
Sbjct: 241 LNLLASLSGGGGSGRREDDPR 256

[Close]

BLAST of MS024683 vs. ExPASy TrEMBL
Match: A0A6J1KJS4 (transcription factor TCP7-like OS=Cucurbita maxima OX=3661 GN=LOC111493818 PE=4 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 5.3e-102
Identity = 221/264 (83.71%), Postives = 227/264 (85.98%), Query Frame = 0


Query: 1   MSNSETPN-NGVS-------QKPPPSATNGALAVKKPPSKDRHSKVDGRGRRIRMPIICA 60
           MSNS++ N NGVS        K  PS +NGAL VKKPPSKDRHSKVDGRGRRIRMPIICA
Sbjct: 1   MSNSDSGNTNGVSNGAAIDTHKNQPS-SNGALVVKKPPSKDRHSKVDGRGRRIRMPIICA 60

Query: 61  ARVFQLTRELGLKSDGQTIEWLLRHAEPSIIAATGTGTTPANFSSVAVSVRGNNAGSTSL 120
           ARVFQLTRELG KSDGQTIEWLLR AEPSIIAATGTGTTPANFSSV++SVRG N GSTSL
Sbjct: 61  ARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRG-NGGSTSL 120

Query: 121 SSPSSTTSTLSLSRPQPLSGPAPFILGKRVRSDDDAGGAKDDGLGVGPTVGSLVGQTGPG 180
           SSPSSTTSTLSLSRPQ LSGP PFILGKRVRSDDD  G KDDG GVGP        TGPG
Sbjct: 121 SSPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDD--GGKDDGTGVGP--------TGPG 180

Query: 181 GYWAIPARPDYGQVWSFAAAAAAPSEMVVQPGAISQQASLFSQQQQPIREASAARVGNYL 240
           GYWAIPARPDYGQVWSF  AAAAPSEMVVQPG ISQQASLF+QQQQPIREASAARVGNYL
Sbjct: 181 GYWAIPARPDYGQVWSF--AAAAPSEMVVQPGGISQQASLFAQQQQPIREASAARVGNYL 240

Query: 241 PGHLNLLASLS-GGSSGRREDDPR 256
           PGHLNLLASLS GG SGRREDDPR
Sbjct: 241 PGHLNLLASLSGGGGSGRREDDPR 250

[Close]

BLAST of MS024683 vs. ExPASy TrEMBL
Match: A0A6J1H1R0 (transcription factor TCP7-like OS=Cucurbita moschata OX=3662 GN=LOC111458790 PE=4 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 1.3e-100
Identity = 219/264 (82.95%), Postives = 225/264 (85.23%), Query Frame = 0


Query: 1   MSNSETPN-NGVS-------QKPPPSATNGALAVKKPPSKDRHSKVDGRGRRIRMPIICA 60
           MSNS++ N NGVS        K  PS +NGAL VKKPPSKDRHSKVDGRGRRIRMPIICA
Sbjct: 81  MSNSDSGNTNGVSNGAAVDTHKNQPS-SNGALVVKKPPSKDRHSKVDGRGRRIRMPIICA 140

Query: 61  ARVFQLTRELGLKSDGQTIEWLLRHAEPSIIAATGTGTTPANFSSVAVSVRGNNAGSTSL 120
           ARVFQLTRELG KSDGQTIEWLLR AEPSIIAATGTGTTPANFSSV++SVRG N GSTSL
Sbjct: 141 ARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRG-NGGSTSL 200

Query: 121 SSPSSTTSTLSLSRPQPLSGPAPFILGKRVRSDDDAGGAKDDGLGVGPTVGSLVGQTGPG 180
           SSPSSTTSTLSLSRPQ LSGP PFILGKRVRSDDD  G KDDG GVGP        TGPG
Sbjct: 201 SSPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDD--GGKDDGAGVGP--------TGPG 260

Query: 181 GYWAIPARPDYGQVWSFAAAAAAPSEMVVQPGAISQQASLFSQQQQPIREASAARVGNYL 240
           GYWAIPARPDYGQVWSF  AAAAPSEMVVQPG ISQQASLF+Q QQPIREASAARVGNYL
Sbjct: 261 GYWAIPARPDYGQVWSF--AAAAPSEMVVQPGGISQQASLFAQPQQPIREASAARVGNYL 320

Query: 241 PGHLNLLASLS-GGSSGRREDDPR 256
           P HLNLLASLS GG SGRREDDPR
Sbjct: 321 PSHLNLLASLSGGGGSGRREDDPR 330

[Close]

BLAST of MS024683 vs. TAIR 10
Match: AT5G23280.1 (TCP family transcription factor )

HSP 1 Score: 248.8 bits (634), Expect = 4.6e-66
Identity = 157/266 (59.02%), Postives = 181/266 (68.05%), Query Frame = 0


Query: 3   NSETPNNGVSQKPPPSATNGAL-------AVKKPPSKDRHSKVDGRGRRIRMPIICAARV 62
           N+   NN  +      ++NGAL        VKKPP+KDRHSKVDGRGRRIRMPIICAARV
Sbjct: 4   NNNNNNNNNNNDGLMISSNGALIEQQPSVVVKKPPAKDRHSKVDGRGRRIRMPIICAARV 63

Query: 63  FQLTRELGLKSDGQTIEWLLRHAEPSIIAATGTGTTPANFSSVAVSVRGNNAGSTSLSSP 122
           FQLTRELG KSDGQTIEWLLR AEPSIIAATGTGTTPA+FS+ +VS+RG    STSL   
Sbjct: 64  FQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTASVSIRG-ATNSTSLDHK 123

Query: 123 SSTTSTLSLSRPQPLSGPAPFILGKRVRSDDDAGGAKD-DGLGVGPTVGSLVGQTGPGGY 182
            ++           L G +PFILGKRVR+D+D+  + +   +G   T       T P G+
Sbjct: 124 PTSL----------LGGTSPFILGKRVRADEDSNNSHNHSSVGKDETF-----TTTPAGF 183

Query: 183 WAIPARPDYGQVWSFAAAAAAPSEMVVQPGAISQQASLFSQQQQ---PIREASAARVGNY 242
           WA+PARPD+GQVWSF   A AP EM +Q     QQ     QQQQ    + EASAARVGNY
Sbjct: 184 WAVPARPDFGQVWSF---AGAPQEMFLQQQHHHQQPLFVHQQQQQQAAMGEASAARVGNY 243

Query: 243 LPGHLNLLASLSGGSSG--RREDDPR 256
           LPGHLNLLASLSGGS G  RRE+DPR
Sbjct: 244 LPGHLNLLASLSGGSPGSDRREEDPR 250

[Close]

BLAST of MS024683 vs. TAIR 10
Match: AT5G08330.1 (TCP family transcription factor )

HSP 1 Score: 234.2 bits (596), Expect = 1.2e-61
Identity = 150/245 (61.22%), Postives = 165/245 (67.35%), Query Frame = 0


Query: 25  AVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGLKSDGQTIEWLLRHAEPSIIA 84
           AVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELG KSDGQTIEWLLR AEPSIIA
Sbjct: 25  AVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIA 84

Query: 85  ATGTGTTPANFSSVAVSVRGNNAGSTSLSSPSSTTSTLSLSRPQPLSGPAPFILGKRV-- 144
           ATGTGTTPA+FS+ +                              LS  +PF LGKRV  
Sbjct: 85  ATGTGTTPASFSTAS------------------------------LSTSSPFTLGKRVVR 144

Query: 145 RSDDDAGGAKDDGLGVGPTVG-SLVGQTGPGGYWAIPARPDYGQVWSFAAAAAAPSEMVV 204
             + ++GG    GL VG T+G SL+G  G GG+WA+PARPD+GQVWSF  A  AP EMV 
Sbjct: 145 AEEGESGGGGGGGLTVGHTMGTSLMGGGGSGGFWAVPARPDFGQVWSF--ATGAPPEMVF 204

Query: 205 QPGAISQQASLF---SQQQQ-------PIREASAARVGNYLPG-HLNLLASLSGGS--SG 254
                 Q A+LF    QQQQ        + EASAARVGNYLPG HLNLLASLSGG+  SG
Sbjct: 205 --AQQQQPATLFVRHQQQQQASAAAAAAMGEASAARVGNYLPGHHLNLLASLSGGANGSG 235

[Close]

BLAST of MS024683 vs. TAIR 10
Match: AT3G47620.1 (TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 )

HSP 1 Score: 128.6 bits (322), Expect = 7.0e-30
Identity = 78/146 (53.42%), Postives = 96/146 (65.75%), Query Frame = 0


Query: 4   SETPNNGVSQKPPPSAT----------NGALAVKKPP-----SKDRHSKVDGRGRRIRMP 63
           S++     SQK  P  T          +  +A KKPP     +KDRH+KVDGRGRRIRMP
Sbjct: 75  SQSQPQSQSQKSQPQTTQKELLQTQEESAVVAAKKPPLKRASTKDRHTKVDGRGRRIRMP 134

Query: 64  IICAARVFQLTRELGLKSDGQTIEWLLRHAEPSIIAATGTGTTPANFSSVAVSVRGNNAG 123
            +CAARVFQLTRELG KSDG+TIEWLL+ AEPS+IAATGTGT PANF+S+ +S+R   + 
Sbjct: 135 ALCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAATGTGTIPANFTSLNISLR---SS 194

Query: 124 STSLSSPSSTTSTLSLSRPQPLSGPA 135
            +S+S PS   S  S   P  +  PA
Sbjct: 195 GSSMSLPSHFRSAASTFSPNNIFSPA 217

[Close]

BLAST of MS024683 vs. TAIR 10
Match: AT1G35560.1 (TCP family transcription factor )

HSP 1 Score: 123.6 bits (309), Expect = 2.2e-28
Identity = 72/105 (68.57%), Postives = 82/105 (78.10%), Query Frame = 0


Query: 16  PPSATNGALAVKKP---PSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGLKSDGQTIE 75
           P S T    A K P   PSKDRH KVDGRGRRIRMP ICAARVFQLTREL  KSDG+TIE
Sbjct: 37  PNSTTTTVTAAKTPAKRPSKDRHIKVDGRGRRIRMPAICAARVFQLTRELQHKSDGETIE 96

Query: 76  WLLRHAEPSIIAATGTGTTPANFSSVAVSVRGNNAGSTSLSSPSS 118
           WLL+ AEP+IIAATGTGT PAN S++ +S+R  ++GST LS+P S
Sbjct: 97  WLLQQAEPAIIAATGTGTIPANISTLNISLR--SSGST-LSAPLS 138

[Close]

BLAST of MS024683 vs. TAIR 10
Match: AT1G72010.1 (TCP family transcription factor )

HSP 1 Score: 122.5 bits (306), Expect = 5.0e-28
Identity = 74/126 (58.73%), Postives = 93/126 (73.81%), Query Frame = 0


Query: 1   MSNSETPNNGVSQKPPPSATNG-ALAV----KKPPSKDRHSKVDGRGRRIRMPIICAARV 60
           +S+ +  N   S     S ++G ALAV     K P+KDRH+KVDGRGRRIRMP +CAARV
Sbjct: 28  ISSGQHGNISTSATSSTSTSSGSALAVVKSAVKKPTKDRHTKVDGRGRRIRMPAMCAARV 87

Query: 61  FQLTRELGLKSDGQTIEWLLRHAEPSIIAATGTGTTPANFSSVAVSVRGNNAGSTSLSSP 120
           FQLTRELG KSDG+TIEWLL+ AEP+IIA+TGTGT PANFS++  S+R +  GST  S  
Sbjct: 88  FQLTRELGHKSDGETIEWLLQQAEPAIIASTGTGTIPANFSTLNASLR-SGGGSTLFSQA 147

Query: 121 SSTTST 122
           S ++S+
Sbjct: 148 SKSSSS 152

The following BLAST results are available for this feature:

BLAST of MS024683 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143620.1	4.3e-106	84.29	transcription factor TCP7 [Cucumis sativus] >KGN50442.1 hypothetical protein Csa...	[more]
XP_008445886.1	7.3e-106	83.91	PREDICTED: transcription factor TCP7-like [Cucumis melo] >KAA0034075.1 transcrip...	[more]
XP_038893054.1	5.2e-104	82.77	transcription factor TCP7-like [Benincasa hispida]	[more]
XP_022999463.1	1.1e-101	83.71	transcription factor TCP7-like [Cucurbita maxima]	[more]
XP_022957369.1	2.7e-100	82.95	transcription factor TCP7-like [Cucurbita moschata]	[more]

BLAST of MS024683 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FMX2	6.5e-65	59.02	Transcription factor TCP7 OS=Arabidopsis thaliana OX=3702 GN=TCP7 PE=1 SV=1	[more]
Q9FTA2	1.7e-60	61.22	Transcription factor TCP21 OS=Arabidopsis thaliana OX=3702 GN=TCP21 PE=1 SV=1	[more]
Q93Z00	9.8e-29	53.42	Transcription factor TCP14 OS=Arabidopsis thaliana OX=3702 GN=TCP14 PE=1 SV=1	[more]
Q53PH2	8.3e-28	69.89	Transcription factor PCF3 OS=Oryza sativa subsp. japonica OX=39947 GN=PCF3 PE=2 ...	[more]
Q9LQF0	3.1e-27	68.57	Transcription factor TCP23 OS=Arabidopsis thaliana OX=3702 GN=TCP23 PE=1 SV=1	[more]

BLAST of MS024683 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KPX7	2.1e-106	84.29	TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G175170 PE=4 SV...	[more]
A0A5A7SY02	3.5e-106	83.91	Transcription factor TCP7-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A1S3BDR1	3.5e-106	83.91	transcription factor TCP7-like OS=Cucumis melo OX=3656 GN=LOC103488772 PE=4 SV=1	[more]
A0A6J1KJS4	5.3e-102	83.71	transcription factor TCP7-like OS=Cucurbita maxima OX=3661 GN=LOC111493818 PE=4 ...	[more]
A0A6J1H1R0	1.3e-100	82.95	transcription factor TCP7-like OS=Cucurbita moschata OX=3662 GN=LOC111458790 PE=...	[more]

BLAST of MS024683 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G23280.1	4.6e-66	59.02	TCP family transcription factor	[more]
AT5G08330.1	1.2e-61	61.22	TCP family transcription factor	[more]
AT3G47620.1	7.0e-30	53.42	TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14	[more]
AT1G35560.1	2.2e-28	68.57	TCP family transcription factor	[more]
AT1G72010.1	5.0e-28	58.73	TCP family transcription factor	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017887	Transcription factor TCP subgroup	PFAM	PF03634	TCP	coord: 31..109 e-value: 2.8E-30 score: 105.9
IPR017887	Transcription factor TCP subgroup	PROSITE	PS51369	TCP	coord: 31..85 score: 27.287846
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..19
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..42
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 105..163
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 105..128
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..42
None	No IPR available	PANTHER	PTHR31072:SF165	TRANSCRIPTION FACTOR TCP FAMILY-RELATED	coord: 1..252
IPR005333	Transcription factor, TCP	PANTHER	PTHR31072	TRANSCRIPTION FACTOR TCP4-RELATED	coord: 1..252

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS024683.1	MS024683.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003700	DNA-binding transcription factor activity