MS024320 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGGATTCGCCGTTCGCGGTGAACAACCGGCCACCATTCAAGGAGATCGCTCTCGCCGTCGCTCTTCTCGTTTTCGGCACCATTGGAATCGTCGTTGGAATCGTCATGGCCAGTAATCGAGTCGGTGGTGATCGTGCTCACGGTACTTTTCTTGCCTTTCTTTTTCCGCTGCAATTTTGCCCTAGTTCAACTTTAATTTTCTGCCTCTTTCTTGAAAATTTTCAGGGGTGTTTTTCTCTTTGTTGGGAGGTCTCTTGTTTATTCCGGGTTTCTATTACACGCGGATTGCCTACTACGCTTATAAGGGTTTCAAAGGCTTCTCCTTCTCCAACATACCCCCTGTCTAA ATGATGGATTCGCCGTTCGCGGTGAACAACCGGCCACCATTCAAGGAGATCGCTCTCGCCGTCGCTCTTCTCGTTTTCGGCACCATTGGAATCGTCGTTGGAATCGTCATGGCCAGTAATCGAGTCGGTGGTGATCGTGCTCACGGGGTGTTTTTCTCTTTGTTGGGAGGTCTCTTGTTTATTCCGGGTTTCTATTACACGCGGATTGCCTACTACGCTTATAAGGGTTTCAAAGGCTTCTCCTTCTCCAACATACCCCCTGTCTAA ATGATGGATTCGCCGTTCGCGGTGAACAACCGGCCACCATTCAAGGAGATCGCTCTCGCCGTCGCTCTTCTCGTTTTCGGCACCATTGGAATCGTCGTTGGAATCGTCATGGCCAGTAATCGAGTCGGTGGTGATCGTGCTCACGGGGTGTTTTTCTCTTTGTTGGGAGGTCTCTTGTTTATTCCGGGTTTCTATTACACGCGGATTGCCTACTACGCTTATAAGGGTTTCAAAGGCTTCTCCTTCTCCAACATACCCCCTGTCTAA MMDSPFAVNNRPPFKEIALAVALLVFGTIGIVVGIVMASNRVGGDRAHGVFFSLLGGLLFIPGFYYTRIAYYAYKGFKGFSFSNIPPV Homology
BLAST of MS024320 vs. NCBI nr
Match: XP_022134647.1 (transmembrane protein 230 [Momordica charantia]) HSP 1 Score: 176.8 bits (447), Expect = 8.2e-41 Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0
BLAST of MS024320 vs. NCBI nr
Match: XP_008453547.1 (PREDICTED: transmembrane protein 230-like [Cucumis melo]) HSP 1 Score: 164.1 bits (414), Expect = 5.5e-37 Identity = 80/88 (90.91%), Postives = 83/88 (94.32%), Query Frame = 0
BLAST of MS024320 vs. NCBI nr
Match: XP_004146339.1 (transmembrane protein 230 [Cucumis sativus] >KGN65495.1 hypothetical protein Csa_019721 [Cucumis sativus]) HSP 1 Score: 162.5 bits (410), Expect = 1.6e-36 Identity = 79/88 (89.77%), Postives = 82/88 (93.18%), Query Frame = 0
BLAST of MS024320 vs. NCBI nr
Match: XP_038879685.1 (transmembrane protein 230 [Benincasa hispida]) HSP 1 Score: 162.2 bits (409), Expect = 2.1e-36 Identity = 80/88 (90.91%), Postives = 82/88 (93.18%), Query Frame = 0
BLAST of MS024320 vs. NCBI nr
Match: KAG7021684.1 (Transmembrane protein-like protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 162.2 bits (409), Expect = 2.1e-36 Identity = 80/88 (90.91%), Postives = 82/88 (93.18%), Query Frame = 0
BLAST of MS024320 vs. ExPASy Swiss-Prot
Match: Q5ZLH4 (Transmembrane protein 230 OS=Gallus gallus OX=9031 GN=TMEM230 PE=2 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 7.1e-11 Identity = 36/77 (46.75%), Postives = 54/77 (70.13%), Query Frame = 0
BLAST of MS024320 vs. ExPASy Swiss-Prot
Match: Q8CIB6 (Transmembrane protein 230 OS=Mus musculus OX=10090 GN=Tmem230 PE=1 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 7.1e-11 Identity = 36/77 (46.75%), Postives = 53/77 (68.83%), Query Frame = 0
BLAST of MS024320 vs. ExPASy Swiss-Prot
Match: Q5BJP5 (Transmembrane protein 230 OS=Rattus norvegicus OX=10116 GN=Tmem230 PE=1 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 7.1e-11 Identity = 36/77 (46.75%), Postives = 53/77 (68.83%), Query Frame = 0
BLAST of MS024320 vs. ExPASy Swiss-Prot
Match: Q96A57 (Transmembrane protein 230 OS=Homo sapiens OX=9606 GN=TMEM230 PE=1 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 2.7e-10 Identity = 35/77 (45.45%), Postives = 52/77 (67.53%), Query Frame = 0
BLAST of MS024320 vs. ExPASy Swiss-Prot
Match: Q5R8X3 (Transmembrane protein 230 OS=Pongo abelii OX=9601 GN=TMEM230 PE=2 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 2.7e-10 Identity = 35/77 (45.45%), Postives = 52/77 (67.53%), Query Frame = 0
BLAST of MS024320 vs. ExPASy TrEMBL
Match: A0A6J1C066 (Transmembrane protein 230 OS=Momordica charantia OX=3673 GN=LOC111006871 PE=3 SV=1) HSP 1 Score: 176.8 bits (447), Expect = 4.0e-41 Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0
BLAST of MS024320 vs. ExPASy TrEMBL
Match: A0A1S3BWL2 (Transmembrane protein 230 OS=Cucumis melo OX=3656 GN=LOC103494229 PE=3 SV=1) HSP 1 Score: 164.1 bits (414), Expect = 2.7e-37 Identity = 80/88 (90.91%), Postives = 83/88 (94.32%), Query Frame = 0
BLAST of MS024320 vs. ExPASy TrEMBL
Match: A0A0A0LUC1 (Transmembrane protein 230 OS=Cucumis sativus OX=3659 GN=Csa_1G426960 PE=3 SV=1) HSP 1 Score: 162.5 bits (410), Expect = 7.8e-37 Identity = 79/88 (89.77%), Postives = 82/88 (93.18%), Query Frame = 0
BLAST of MS024320 vs. ExPASy TrEMBL
Match: A0A6J1I4W8 (Transmembrane protein 230 OS=Cucurbita maxima OX=3661 GN=LOC111470698 PE=3 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 1.3e-36 Identity = 79/88 (89.77%), Postives = 82/88 (93.18%), Query Frame = 0
BLAST of MS024320 vs. ExPASy TrEMBL
Match: A0A6J1EUE9 (Transmembrane protein 230 OS=Cucurbita moschata OX=3662 GN=LOC111437657 PE=3 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 1.3e-36 Identity = 79/88 (89.77%), Postives = 82/88 (93.18%), Query Frame = 0
BLAST of MS024320 vs. TAIR 10
Match: AT4G29850.1 (Eukaryotic protein of unknown function (DUF872) ) HSP 1 Score: 145.2 bits (365), Expect = 2.5e-35 Identity = 70/88 (79.55%), Postives = 78/88 (88.64%), Query Frame = 0
BLAST of MS024320 vs. TAIR 10
Match: AT2G19350.1 (Eukaryotic protein of unknown function (DUF872) ) HSP 1 Score: 137.5 bits (345), Expect = 5.2e-33 Identity = 66/88 (75.00%), Postives = 76/88 (86.36%), Query Frame = 0
BLAST of MS024320 vs. TAIR 10
Match: AT3G29170.1 (Eukaryotic protein of unknown function (DUF872) ) HSP 1 Score: 64.3 bits (155), Expect = 5.6e-11 Identity = 33/77 (42.86%), Postives = 50/77 (64.94%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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