MS024172 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCAAAGTCTAAGATGAAGAGAGCGTCGATCGGTTCTCGTAAATCCGCCATTGTTCATGAAGAATCGGAAGCAAGGCGTAAATATCAAATTCTGCTGCAAGATTTCTTGGAAGTCCAGAAGGTTCGGTTTCTTCTCTCTCGAATTGCAGAGTGTGTTGAGGAACGAGGAGCGATTATATCACAGTTTTGAAATTTCATTTTATTTTTTCTGCAGGATTTTGTTTCGAAGAAGAGAAAATTGCAGGTTCTAAGACAGAGGAAGGAGACTCATGGAGCAGAAGTTAGGTAATGATTCTTCGGACTTTCATAAGCTTTCCGAAAATCTATCGATTATAATTAGTTCTCTAATGGCGGGTTTCATTTTCTCTGAACAGATTTTTGAGACAAAGGCTCGAATATCTGCAGAAGTTGCAGAATCGTAAACATGATTCAATTTCAGAGGACCTGCCCATGGTTTTGGAAACGAAGCAGAATCTGGTAAAGAAATCGATATGGAATTTTTTTTCTTTATGGAGGATTGATTAAGAAAATTTAGATTGGCAATAAATGGAGGATTGTGATTGTAGGATGGTGTGGAAGAGGAGAAGTTTCAGAATAAGGCCTTAGGCATCAACAAAATGGTGGGAAAAATTAAAACTTTAGGGCAAGCGCGAGATATTAACTCGGTTCCTTCGTGA ATGTCAAAGTCTAAGATGAAGAGAGCGTCGATCGGTTCTCGTAAATCCGCCATTGTTCATGAAGAATCGGAAGCAAGGCGTAAATATCAAATTCTGCTGCAAGATTTCTTGGAAGTCCAGAAGGATTTTGTTTCGAAGAAGAGAAAATTGCAGGTTCTAAGACAGAGGAAGGAGACTCATGGAGCAGAAGTTAGATTTTTGAGACAAAGGCTCGAATATCTGCAGAAGTTGCAGAATCGTAAACATGATTCAATTTCAGAGGACCTGCCCATGGTTTTGGAAACGAAGCAGAATCTGGATGGTGTGGAAGAGGAGAAGTTTCAGAATAAGGCCTTAGGCATCAACAAAATGGTGGGAAAAATTAAAACTTTAGGGCAAGCGCGAGATATTAACTCGGTTCCTTCGTGA ATGTCAAAGTCTAAGATGAAGAGAGCGTCGATCGGTTCTCGTAAATCCGCCATTGTTCATGAAGAATCGGAAGCAAGGCGTAAATATCAAATTCTGCTGCAAGATTTCTTGGAAGTCCAGAAGGATTTTGTTTCGAAGAAGAGAAAATTGCAGGTTCTAAGACAGAGGAAGGAGACTCATGGAGCAGAAGTTAGATTTTTGAGACAAAGGCTCGAATATCTGCAGAAGTTGCAGAATCGTAAACATGATTCAATTTCAGAGGACCTGCCCATGGTTTTGGAAACGAAGCAGAATCTGGATGGTGTGGAAGAGGAGAAGTTTCAGAATAAGGCCTTAGGCATCAACAAAATGGTGGGAAAAATTAAAACTTTAGGGCAAGCGCGAGATATTAACTCGGTTCCTTCGTGA MSKSKMKRASIGSRKSAIVHEESEARRKYQILLQDFLEVQKDFVSKKRKLQVLRQRKETHGAEVRFLRQRLEYLQKLQNRKHDSISEDLPMVLETKQNLDGVEEEKFQNKALGINKMVGKIKTLGQARDINSVPS Homology
BLAST of MS024172 vs. NCBI nr
Match: XP_022132126.1 (uncharacterized protein LOC111005070 [Momordica charantia]) HSP 1 Score: 245.4 bits (625), Expect = 2.9e-61 Identity = 133/135 (98.52%), Postives = 134/135 (99.26%), Query Frame = 0
BLAST of MS024172 vs. NCBI nr
Match: XP_038884216.1 (uncharacterized protein LOC120075114 isoform X1 [Benincasa hispida]) HSP 1 Score: 89.7 bits (221), Expect = 2.0e-14 Identity = 51/70 (72.86%), Postives = 59/70 (84.29%), Query Frame = 0
BLAST of MS024172 vs. NCBI nr
Match: XP_038884217.1 (uncharacterized protein LOC120075114 isoform X2 [Benincasa hispida]) HSP 1 Score: 77.8 bits (190), Expect = 8.0e-11 Identity = 45/63 (71.43%), Postives = 52/63 (82.54%), Query Frame = 0
BLAST of MS024172 vs. NCBI nr
Match: KAG6772902.1 (hypothetical protein POTOM_024331 [Populus tomentosa]) HSP 1 Score: 77.8 bits (190), Expect = 8.0e-11 Identity = 44/78 (56.41%), Postives = 58/78 (74.36%), Query Frame = 0
BLAST of MS024172 vs. NCBI nr
Match: XP_002308710.2 (uncharacterized protein LOC7489157 [Populus trichocarpa] >PNT33918.1 hypothetical protein POPTR_006G264900 [Populus trichocarpa]) HSP 1 Score: 77.4 bits (189), Expect = 1.0e-10 Identity = 44/79 (55.70%), Postives = 58/79 (73.42%), Query Frame = 0
BLAST of MS024172 vs. ExPASy TrEMBL
Match: A0A6J1BRD5 (uncharacterized protein LOC111005070 OS=Momordica charantia OX=3673 GN=LOC111005070 PE=4 SV=1) HSP 1 Score: 245.4 bits (625), Expect = 1.4e-61 Identity = 133/135 (98.52%), Postives = 134/135 (99.26%), Query Frame = 0
BLAST of MS024172 vs. ExPASy TrEMBL
Match: A0A2K2A8R5 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_006G264900 PE=4 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 5.1e-11 Identity = 44/79 (55.70%), Postives = 58/79 (73.42%), Query Frame = 0
BLAST of MS024172 vs. ExPASy TrEMBL
Match: A0A6M2FAA9 (Uncharacterized protein OS=Populus davidiana OX=266767 PE=4 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 5.1e-11 Identity = 44/78 (56.41%), Postives = 58/78 (74.36%), Query Frame = 0
BLAST of MS024172 vs. ExPASy TrEMBL
Match: A0A4U5QM20 (Uncharacterized protein OS=Populus alba OX=43335 GN=D5086_0000068340 PE=4 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 5.1e-11 Identity = 44/78 (56.41%), Postives = 58/78 (74.36%), Query Frame = 0
BLAST of MS024172 vs. ExPASy TrEMBL
Match: A0A1R3J7E0 (Ubiquitin OS=Corchorus olitorius OX=93759 GN=COLO4_18958 PE=4 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 6.6e-11 Identity = 46/85 (54.12%), Postives = 67/85 (78.82%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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