MS023825 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCAGGATTCATCGAGAAAATTGAAGAGAAGCTCCACATCGGAGGGGGCCATAAGGGCGACGAGCACCACAAGAGCGGCGATCACCACAAGGGCGACGATCACCACAAGAGCGGCGAGCACGGCGCCAAGGCGGGGGAGCACCACAAGGAGGGGATTGTGGATAAGATCAAGGACAAGATCCACGGCGACGGACACGACCACGACCACAAAGGCGAGGAGAAGAAGAAGAAGAAGGAGAAGAAGAAGAAGGAGGGCGAGCACAACCACGGCGGCCACAGCAGCAGCGACAGCGATAGCGAC ATGTCAGGATTCATCGAGAAAATTGAAGAGAAGCTCCACATCGGAGGGGGCCATAAGGGCGACGAGCACCACAAGAGCGGCGATCACCACAAGGGCGACGATCACCACAAGAGCGGCGAGCACGGCGCCAAGGCGGGGGAGCACCACAAGGAGGGGATTGTGGATAAGATCAAGGACAAGATCCACGGCGACGGACACGACCACGACCACAAAGGCGAGGAGAAGAAGAAGAAGAAGGAGAAGAAGAAGAAGGAGGGCGAGCACAACCACGGCGGCCACAGCAGCAGCGACAGCGATAGCGAC ATGTCAGGATTCATCGAGAAAATTGAAGAGAAGCTCCACATCGGAGGGGGCCATAAGGGCGACGAGCACCACAAGAGCGGCGATCACCACAAGGGCGACGATCACCACAAGAGCGGCGAGCACGGCGCCAAGGCGGGGGAGCACCACAAGGAGGGGATTGTGGATAAGATCAAGGACAAGATCCACGGCGACGGACACGACCACGACCACAAAGGCGAGGAGAAGAAGAAGAAGAAGGAGAAGAAGAAGAAGGAGGGCGAGCACAACCACGGCGGCCACAGCAGCAGCGACAGCGATAGCGAC MSGFIEKIEEKLHIGGGHKGDEHHKSGDHHKGDDHHKSGEHGAKAGEHHKEGIVDKIKDKIHGDGHDHDHKGEEKKKKKEKKKKEGEHNHGGHSSSDSDSD Homology
BLAST of MS023825 vs. NCBI nr
Match: XP_022158601.1 (protein SRC1 [Momordica charantia]) HSP 1 Score: 186.0 bits (471), Expect = 1.6e-43 Identity = 99/101 (98.02%), Postives = 100/101 (99.01%), Query Frame = 0
BLAST of MS023825 vs. NCBI nr
Match: XP_022973362.1 (protein SRC1-like [Cucurbita maxima] >XP_022975607.1 protein SRC1-like [Cucurbita maxima]) HSP 1 Score: 104.4 bits (259), Expect = 6.0e-19 Identity = 71/105 (67.62%), Postives = 80/105 (76.19%), Query Frame = 0
BLAST of MS023825 vs. NCBI nr
Match: XP_038903205.1 (protein SRC1 [Benincasa hispida]) HSP 1 Score: 104.0 bits (258), Expect = 7.8e-19 Identity = 68/105 (64.76%), Postives = 80/105 (76.19%), Query Frame = 0
BLAST of MS023825 vs. NCBI nr
Match: XP_022974702.1 (protein SRC1-like [Cucurbita maxima]) HSP 1 Score: 102.8 bits (255), Expect = 1.7e-18 Identity = 70/105 (66.67%), Postives = 80/105 (76.19%), Query Frame = 0
BLAST of MS023825 vs. NCBI nr
Match: XP_008443295.1 (PREDICTED: protein SRC1 [Cucumis melo] >KAA0053854.1 zinc transporter ZIP6 [Cucumis melo var. makuwa] >TYK25548.1 zinc transporter ZIP6 [Cucumis melo var. makuwa]) HSP 1 Score: 98.2 bits (243), Expect = 4.3e-17 Identity = 68/104 (65.38%), Postives = 79/104 (75.96%), Query Frame = 0
BLAST of MS023825 vs. ExPASy Swiss-Prot
Match: O04132 (Protein SRC1 OS=Glycine max OX=3847 GN=SRC1 PE=2 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 2.0e-17 Identity = 70/112 (62.50%), Postives = 77/112 (68.75%), Query Frame = 0
BLAST of MS023825 vs. ExPASy Swiss-Prot
Match: Q9SLJ2 (Dehydrin HIRD11 OS=Arabidopsis thaliana OX=3702 GN=HIRD11 PE=1 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 6.0e-14 Identity = 57/104 (54.81%), Postives = 67/104 (64.42%), Query Frame = 0
BLAST of MS023825 vs. ExPASy TrEMBL
Match: A0A6J1E1E0 (protein SRC1 OS=Momordica charantia OX=3673 GN=LOC111025058 PE=4 SV=1) HSP 1 Score: 186.0 bits (471), Expect = 7.6e-44 Identity = 99/101 (98.02%), Postives = 100/101 (99.01%), Query Frame = 0
BLAST of MS023825 vs. ExPASy TrEMBL
Match: A0A6J1I7B7 (protein SRC1-like OS=Cucurbita maxima OX=3661 GN=LOC111471920 PE=4 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 2.9e-19 Identity = 71/105 (67.62%), Postives = 80/105 (76.19%), Query Frame = 0
BLAST of MS023825 vs. ExPASy TrEMBL
Match: A0A6J1IAZ2 (protein SRC1-like OS=Cucurbita maxima OX=3661 GN=LOC111473441 PE=4 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 8.4e-19 Identity = 70/105 (66.67%), Postives = 80/105 (76.19%), Query Frame = 0
BLAST of MS023825 vs. ExPASy TrEMBL
Match: A0A5A7UF86 (Zinc transporter ZIP6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007000 PE=4 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 2.1e-17 Identity = 68/104 (65.38%), Postives = 79/104 (75.96%), Query Frame = 0
BLAST of MS023825 vs. ExPASy TrEMBL
Match: A0A1S3B8E4 (protein SRC1 OS=Cucumis melo OX=3656 GN=LOC103486916 PE=4 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 2.1e-17 Identity = 68/104 (65.38%), Postives = 79/104 (75.96%), Query Frame = 0
BLAST of MS023825 vs. TAIR 10
Match: AT1G54410.1 (dehydrin family protein ) HSP 1 Score: 78.2 bits (191), Expect = 4.3e-15 Identity = 57/104 (54.81%), Postives = 67/104 (64.42%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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