MS023712 (gene) Bitter gourd (TR) v1

Overview


Name	MS023712
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	60S ribosomal protein L31
Location	scaffold570: 430155 .. 431226 (+)
RNA-Seq Expression	MS023712
Synteny	MS023712

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAGAGAAGACCAAAGGGAGAAAGGAGGAGGTAGTTACTAGGGAGTACACTATTAACCTTCACAAGCGTCTACATGGGTGGTACGTTCATGTTTTCTGCCTTTCGCATCTTGTATTTTTTTTCTCCTTTGAATGCTTTGTATATATATTCTTGTTTATTTTACATAATGTGATTTATGTCGGAGGGGTATCCTCGATTCAGTTATGGTGTTGTAATGCCCGGGTTAATAACTTCAGGAGTTTGCTGTACTATATTGGATTTGCGTTCCACGAATTTACTACTGTTGCACTTTATTGGATGTTTCGAGAATTTATGTAGATTATATTATGTTGGTTTGAGTTCTGTGTTTACTCAACTGTCTTTTGCACTTTGACTGTGCGACCTACAACCCGGAGTGTTGAGTTTTGGATTTGTTGACATGTTAAGATAGTATGCTAGCCAGAATAACCCTATTCCTCACTGCCGAAGCATGTTTTGCAGTATCTTCAGGATATGAGATAAATGAGAGTATTATGATTCCCAATTATTTATTGTAGACTTTGTAGTGTTGTATGATTAGTTTCTCCTTGAATTCGTGCTTGTAATCCCCTATTCTTTTGAGCGTAGAGTTCCTTTTTGTTACATGCTTGTTTATCTTAGTCCTAAACTATGATTGATAGTGCACAAGTCCTTGTTTAATTTTTATTTCCATCTTTAACATTCTGATTGTATTGTTCCTACAAATAATGTTTAACCATGTGAAAGTTTTGTTTGTTACTCATGACTCTAATACTGTTTGTGAATGTACAACAGCACCTTTAAGAAGAAGGCTCCTAAGGCCATCAAGGAGATCAGGAAGTTTGCCGAGAAGGCTATGGGAACGAAGGATGTACGAGTGGATGTGAAGCTGAACAAGCATATTTGGAGCAGGGGAATCAGGAGTGTGCCAAGAAGAATCAGAGTTCGCATTGCTCGCAAGAGGAATGACGATGAAGATGCCAAGGAAGAGTTGTACTCCCTCGTCACAGTATCAGAAATCCCAGCTGAAGGTCTGAAGGGGCTGGGGACTAAAGTCATTGAGGAAGATGAT

mRNA sequence

ATGGTAGAGAAGACCAAAGGGAGAAAGGAGGAGGTAGTTACTAGGGAGTACACTATTAACCTTCACAAGCGTCTACATGGGTGCACCTTTAAGAAGAAGGCTCCTAAGGCCATCAAGGAGATCAGGAAGTTTGCCGAGAAGGCTATGGGAACGAAGGATGTACGAGTGGATGTGAAGCTGAACAAGCATATTTGGAGCAGGGGAATCAGGAGTGTGCCAAGAAGAATCAGAGTTCGCATTGCTCGCAAGAGGAATGACGATGAAGATGCCAAGGAAGAGTTGTACTCCCTCGTCACAGTATCAGAAATCCCAGCTGAAGGTCTGAAGGGGCTGGGGACTAAAGTCATTGAGGAAGATGAT

Coding sequence (CDS)

ATGGTAGAGAAGACCAAAGGGAGAAAGGAGGAGGTAGTTACTAGGGAGTACACTATTAACCTTCACAAGCGTCTACATGGGTGCACCTTTAAGAAGAAGGCTCCTAAGGCCATCAAGGAGATCAGGAAGTTTGCCGAGAAGGCTATGGGAACGAAGGATGTACGAGTGGATGTGAAGCTGAACAAGCATATTTGGAGCAGGGGAATCAGGAGTGTGCCAAGAAGAATCAGAGTTCGCATTGCTCGCAAGAGGAATGACGATGAAGATGCCAAGGAAGAGTTGTACTCCCTCGTCACAGTATCAGAAATCCCAGCTGAAGGTCTGAAGGGGCTGGGGACTAAAGTCATTGAGGAAGATGAT

Protein sequence

MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVSEIPAEGLKGLGTKVIEEDD

Homology

[Close]

BLAST of MS023712 vs. NCBI nr
Match: XP_022154770.1 (60S ribosomal protein L31 [Momordica charantia])

HSP 1 Score: 235.0 bits (598), Expect = 3.5e-58
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60
           MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60

Query: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVSEIPAEGLKGLGTKVIEEDD 120
           NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVSEIPAEGLKGLGTKVIEEDD
Sbjct: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVSEIPAEGLKGLGTKVIEEDD 120

[Close]

BLAST of MS023712 vs. NCBI nr
Match: XP_008459190.1 (PREDICTED: 60S ribosomal protein L31 [Cucumis melo] >XP_022946109.1 60S ribosomal protein L31 [Cucurbita moschata] >XP_022999548.1 60S ribosomal protein L31 [Cucurbita maxima] >XP_038889415.1 60S ribosomal protein L31 [Benincasa hispida] >KAA0061504.1 60S ribosomal protein L31 [Cucumis melo var. makuwa] >KAG7030475.1 60S ribosomal protein L31 [Cucurbita argyrosperma subsp. argyrosperma] >TYK10769.1 60S ribosomal protein L31 [Cucumis melo var. makuwa])

HSP 1 Score: 232.3 bits (591), Expect = 2.3e-57
Identity = 118/120 (98.33%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60
           MVEKTKGRKEEVV+REYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60

Query: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVSEIPAEGLKGLGTKVIEEDD 120
           NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTV+EIPAEGLKGLGTKVIEEDD
Sbjct: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 120

[Close]

BLAST of MS023712 vs. NCBI nr
Match: XP_038878471.1 (60S ribosomal protein L31 [Benincasa hispida] >XP_038878472.1 60S ribosomal protein L31 [Benincasa hispida])

HSP 1 Score: 231.1 bits (588), Expect = 5.0e-57
Identity = 117/120 (97.50%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60
           MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60

Query: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVSEIPAEGLKGLGTKVIEEDD 120
           NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTV+EIPAEGLKGLGTKVI+E+D
Sbjct: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED 120

[Close]

BLAST of MS023712 vs. NCBI nr
Match: XP_022966016.1 (60S ribosomal protein L31-like [Cucurbita maxima])

HSP 1 Score: 230.7 bits (587), Expect = 6.6e-57
Identity = 116/120 (96.67%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60
           MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIR+FAEKAMGTKDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKL 60

Query: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVSEIPAEGLKGLGTKVIEEDD 120
           NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTV+EIPA+GLKGLGTKV+EEDD
Sbjct: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPADGLKGLGTKVLEEDD 120

[Close]

BLAST of MS023712 vs. NCBI nr
Match: XP_022987909.1 (60S ribosomal protein L31-like [Cucurbita maxima])

HSP 1 Score: 230.7 bits (587), Expect = 6.6e-57
Identity = 117/120 (97.50%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60
           MVEKTKGRKEEVV+REYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60

Query: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVSEIPAEGLKGLGTKVIEEDD 120
           NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVSEIPAEGLKGLGTKVI+E+D
Sbjct: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVSEIPAEGLKGLGTKVIDEED 120

[Close]

BLAST of MS023712 vs. ExPASy Swiss-Prot
Match: P46290 (60S ribosomal protein L31 OS=Nicotiana glutinosa OX=35889 GN=RPL31 PE=2 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 1.7e-55
Identity = 108/120 (90.00%), Postives = 116/120 (96.67%), Query Frame = 0


Query: 1   MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60
           M +KTKGRKEEVVTREYTINLHKRLH CTFKKKAP AIKEIRKFA+KAMGTKDVRVDVKL
Sbjct: 1   MSDKTKGRKEEVVTREYTINLHKRLHSCTFKKKAPTAIKEIRKFAQKAMGTKDVRVDVKL 60

Query: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVSEIPAEGLKGLGTKVIEEDD 120
           NK IWSRGIRSVPRR+RVRIARKRNDDEDAKEELYSLVTV+EIPA+GLKGLGTK+IE++D
Sbjct: 61  NKQIWSRGIRSVPRRVRVRIARKRNDDEDAKEELYSLVTVAEIPAKGLKGLGTKIIEDED 120

[Close]

BLAST of MS023712 vs. ExPASy Swiss-Prot
Match: Q9MAV7 (60S ribosomal protein L31 OS=Panax ginseng OX=4054 GN=RPL31 PE=2 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 2.9e-55
Identity = 109/120 (90.83%), Postives = 115/120 (95.83%), Query Frame = 0


Query: 1   MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60
           MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAP AIKEIRKFA+KAMGTKDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTKDVRVDVKL 60

Query: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVSEIPAEGLKGLGTKVIEEDD 120
           NK IWSRGIRSVPRR+RVRIARKRNDDEDAKEELYSLVTV++IPA  LKGLG ++IEEDD
Sbjct: 61  NKQIWSRGIRSVPRRVRVRIARKRNDDEDAKEELYSLVTVAKIPAGTLKGLGPQIIEEDD 120

[Close]

BLAST of MS023712 vs. ExPASy Swiss-Prot
Match: Q9M573 (60S ribosomal protein L31 OS=Perilla frutescens OX=48386 GN=RPL31 PE=2 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 1.3e-52
Identity = 104/116 (89.66%), Postives = 112/116 (96.55%), Query Frame = 0


Query: 5   TKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHI 64
           +K RKEEVV+REYTINLHKRLHGCTFKKKAPKAIKEIRKFA+KAMGT DVRVDVKLNKHI
Sbjct: 6   SKPRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKHI 65

Query: 65  WSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVSEIPAEGLKGLGTKVIEEDD 121
           WSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTV+EIP  GLKGLGT+VI+E++
Sbjct: 66  WSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPEGGLKGLGTQVIDEEE 121

[Close]

BLAST of MS023712 vs. ExPASy Swiss-Prot
Match: P51420 (60S ribosomal protein L31-3 OS=Arabidopsis thaliana OX=3702 GN=RPL31C PE=3 SV=2)

HSP 1 Score: 205.3 bits (521), Expect = 3.9e-52
Identity = 102/119 (85.71%), Postives = 111/119 (93.28%), Query Frame = 0


Query: 2   VEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLN 61
           + + KGRKEEV+TREYTINLH+RLH CTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLN
Sbjct: 1   MSEKKGRKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLN 60

Query: 62  KHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVSEIPAEGLKGLGTKVIEEDD 121
           K IWS+GIR  PRRIRVR+ARKRNDDEDAKEE +SLVTV+EIPAEGL GLGTKVIEE+D
Sbjct: 61  KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEED 119

[Close]

BLAST of MS023712 vs. ExPASy Swiss-Prot
Match: Q9STR1 (60S ribosomal protein L31-2 OS=Arabidopsis thaliana OX=3702 GN=RPL31B PE=3 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 8.6e-52
Identity = 101/119 (84.87%), Postives = 110/119 (92.44%), Query Frame = 0


Query: 2   VEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLN 61
           + + KGRKEEVVTREYTINLH+RLH CTFKKKAPKAIKEIRKFAEK MGTKDVRVDVKLN
Sbjct: 1   MSEKKGRKEEVVTREYTINLHRRLHSCTFKKKAPKAIKEIRKFAEKEMGTKDVRVDVKLN 60

Query: 62  KHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVSEIPAEGLKGLGTKVIEEDD 121
           K IWS+GIR  PRRIRVR+ARKRNDDEDAKEE +SLVTV+EIPAEGL GLGTK+IEE+D
Sbjct: 61  KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKIIEEED 119

[Close]

BLAST of MS023712 vs. ExPASy TrEMBL
Match: A0A6J1DKK4 (60S ribosomal protein L31 OS=Momordica charantia OX=3673 GN=LOC111021941 PE=3 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 1.7e-58
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60
           MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60

Query: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVSEIPAEGLKGLGTKVIEEDD 120
           NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVSEIPAEGLKGLGTKVIEEDD
Sbjct: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVSEIPAEGLKGLGTKVIEEDD 120

[Close]

BLAST of MS023712 vs. ExPASy TrEMBL
Match: A0A5D3CKL3 (60S ribosomal protein L31 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00820 PE=3 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 1.1e-57
Identity = 118/120 (98.33%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60
           MVEKTKGRKEEVV+REYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60

Query: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVSEIPAEGLKGLGTKVIEEDD 120
           NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTV+EIPAEGLKGLGTKVIEEDD
Sbjct: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 120

[Close]

BLAST of MS023712 vs. ExPASy TrEMBL
Match: A0A6J1KK05 (60S ribosomal protein L31 OS=Cucurbita maxima OX=3661 GN=LOC111493875 PE=3 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 1.1e-57
Identity = 118/120 (98.33%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60
           MVEKTKGRKEEVV+REYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60

Query: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVSEIPAEGLKGLGTKVIEEDD 120
           NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTV+EIPAEGLKGLGTKVIEEDD
Sbjct: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 120

[Close]

BLAST of MS023712 vs. ExPASy TrEMBL
Match: A0A6J1G2V4 (60S ribosomal protein L31 OS=Cucurbita moschata OX=3662 GN=LOC111450292 PE=3 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 1.1e-57
Identity = 118/120 (98.33%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60
           MVEKTKGRKEEVV+REYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60

Query: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVSEIPAEGLKGLGTKVIEEDD 120
           NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTV+EIPAEGLKGLGTKVIEEDD
Sbjct: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 120

[Close]

BLAST of MS023712 vs. ExPASy TrEMBL
Match: A0A1S3C9P7 (60S ribosomal protein L31 OS=Cucumis melo OX=3656 GN=LOC103498384 PE=3 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 1.1e-57
Identity = 118/120 (98.33%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60
           MVEKTKGRKEEVV+REYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60

Query: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVSEIPAEGLKGLGTKVIEEDD 120
           NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTV+EIPAEGLKGLGTKVIEEDD
Sbjct: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 120

[Close]

BLAST of MS023712 vs. TAIR 10
Match: AT5G56710.1 (Ribosomal protein L31e family protein )

HSP 1 Score: 205.3 bits (521), Expect = 2.8e-53
Identity = 102/119 (85.71%), Postives = 111/119 (93.28%), Query Frame = 0


Query: 2   VEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLN 61
           + + KGRKEEV+TREYTINLH+RLH CTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLN
Sbjct: 1   MSEKKGRKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLN 60

Query: 62  KHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVSEIPAEGLKGLGTKVIEEDD 121
           K IWS+GIR  PRRIRVR+ARKRNDDEDAKEE +SLVTV+EIPAEGL GLGTKVIEE+D
Sbjct: 61  KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEED 119

[Close]

BLAST of MS023712 vs. TAIR 10
Match: AT4G26230.1 (Ribosomal protein L31e family protein )

HSP 1 Score: 204.1 bits (518), Expect = 6.1e-53
Identity = 101/119 (84.87%), Postives = 110/119 (92.44%), Query Frame = 0


Query: 2   VEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLN 61
           + + KGRKEEVVTREYTINLH+RLH CTFKKKAPKAIKEIRKFAEK MGTKDVRVDVKLN
Sbjct: 1   MSEKKGRKEEVVTREYTINLHRRLHSCTFKKKAPKAIKEIRKFAEKEMGTKDVRVDVKLN 60

Query: 62  KHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVSEIPAEGLKGLGTKVIEEDD 121
           K IWS+GIR  PRRIRVR+ARKRNDDEDAKEE +SLVTV+EIPAEGL GLGTK+IEE+D
Sbjct: 61  KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKIIEEED 119

[Close]

BLAST of MS023712 vs. TAIR 10
Match: AT2G19740.1 (Ribosomal protein L31e family protein )

HSP 1 Score: 203.0 bits (515), Expect = 1.4e-52
Identity = 102/119 (85.71%), Postives = 110/119 (92.44%), Query Frame = 0


Query: 2   VEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLN 61
           +EK KGRKEEVVTREYTINLH+RLH CTFKKKAP AIKEIRKFA KAMGTKDVRVDVKLN
Sbjct: 1   MEKGKGRKEEVVTREYTINLHRRLHSCTFKKKAPNAIKEIRKFALKAMGTKDVRVDVKLN 60

Query: 62  KHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVSEIPAEGLKGLGTKVIEEDD 121
           K IWS+GIR  PRRIRVR+ARKRNDDEDAKEE +SLVTV+EIPAEGL GLGTKVIEE++
Sbjct: 61  KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEEE 119

[Close]

BLAST of MS023712 vs. TAIR 10
Match: AT5G56710.2 (Ribosomal protein L31e family protein )

HSP 1 Score: 130.6 bits (327), Expect = 8.6e-31
Identity = 73/119 (61.34%), Postives = 80/119 (67.23%), Query Frame = 0


Query: 2   VEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLN 61
           + + KGRKEEV+TREYTINLH+RLH CTFKKKAPKAIKEIRKFAEKAMGTKDVRVD    
Sbjct: 1   MSEKKGRKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVD---- 60

Query: 62  KHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVSEIPAEGLKGLGTKVIEEDD 121
                                         EE +SLVTV+EIPAEGL GLGTKVIEE+D
Sbjct: 61  ------------------------------EEFFSLVTVAEIPAEGLSGLGTKVIEEED 85

The following BLAST results are available for this feature:

BLAST of MS023712 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022154770.1	3.5e-58	100.00	60S ribosomal protein L31 [Momordica charantia]	[more]
XP_008459190.1	2.3e-57	98.33	PREDICTED: 60S ribosomal protein L31 [Cucumis melo] >XP_022946109.1 60S ribosoma...	[more]
XP_038878471.1	5.0e-57	97.50	60S ribosomal protein L31 [Benincasa hispida] >XP_038878472.1 60S ribosomal prot...	[more]
XP_022966016.1	6.6e-57	96.67	60S ribosomal protein L31-like [Cucurbita maxima]	[more]
XP_022987909.1	6.6e-57	97.50	60S ribosomal protein L31-like [Cucurbita maxima]	[more]

BLAST of MS023712 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P46290	1.7e-55	90.00	60S ribosomal protein L31 OS=Nicotiana glutinosa OX=35889 GN=RPL31 PE=2 SV=1	[more]
Q9MAV7	2.9e-55	90.83	60S ribosomal protein L31 OS=Panax ginseng OX=4054 GN=RPL31 PE=2 SV=1	[more]
Q9M573	1.3e-52	89.66	60S ribosomal protein L31 OS=Perilla frutescens OX=48386 GN=RPL31 PE=2 SV=1	[more]
P51420	3.9e-52	85.71	60S ribosomal protein L31-3 OS=Arabidopsis thaliana OX=3702 GN=RPL31C PE=3 SV=2	[more]
Q9STR1	8.6e-52	84.87	60S ribosomal protein L31-2 OS=Arabidopsis thaliana OX=3702 GN=RPL31B PE=3 SV=1	[more]

BLAST of MS023712 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DKK4	1.7e-58	100.00	60S ribosomal protein L31 OS=Momordica charantia OX=3673 GN=LOC111021941 PE=3 SV...	[more]
A0A5D3CKL3	1.1e-57	98.33	60S ribosomal protein L31 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A6J1KK05	1.1e-57	98.33	60S ribosomal protein L31 OS=Cucurbita maxima OX=3661 GN=LOC111493875 PE=3 SV=1	[more]
A0A6J1G2V4	1.1e-57	98.33	60S ribosomal protein L31 OS=Cucurbita moschata OX=3662 GN=LOC111450292 PE=3 SV=...	[more]
A0A1S3C9P7	1.1e-57	98.33	60S ribosomal protein L31 OS=Cucumis melo OX=3656 GN=LOC103498384 PE=3 SV=1	[more]

BLAST of MS023712 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G56710.1	2.8e-53	85.71	Ribosomal protein L31e family protein	[more]
AT4G26230.1	6.1e-53	84.87	Ribosomal protein L31e family protein	[more]
AT2G19740.1	1.4e-52	85.71	Ribosomal protein L31e family protein	[more]
AT5G56710.2	8.6e-31	61.34	Ribosomal protein L31e family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000054	Ribosomal protein L31e	SMART	SM01380	Ribosomal_L31e_2	coord: 10..93 e-value: 1.9E-50 score: 183.6
IPR000054	Ribosomal protein L31e	PFAM	PF01198	Ribosomal_L31e	coord: 11..92 e-value: 2.8E-43 score: 146.0
IPR000054	Ribosomal protein L31e	PANTHER	PTHR10956	60S RIBOSOMAL PROTEIN L31	coord: 1..120
IPR000054	Ribosomal protein L31e	CDD	cd00463	Ribosomal_L31e	coord: 9..92 e-value: 5.83991E-33 score: 108.426
IPR023621	Ribosomal protein L31e domain superfamily	GENE3D	3.10.440.10		coord: 9..120 e-value: 5.3E-50 score: 170.0
IPR023621	Ribosomal protein L31e domain superfamily	SUPERFAMILY	54575	Ribosomal protein L31e	coord: 11..92
None	No IPR available	PANTHER	PTHR10956:SF33	60S RIBOSOMAL PROTEIN L31-2-RELATED	coord: 1..120
IPR020052	Ribosomal protein L31e, conserved site	PROSITE	PS01144	RIBOSOMAL_L31E	coord: 54..68

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS023712.1	MS023712.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome