MS023676 (gene) Bitter gourd (TR) v1

Overview


Name	MS023676
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	protein ELF4-LIKE 3-like isoform X2
Location	scaffold570: 194302 .. 194607 (+)
RNA-Seq Expression	MS023676
Synteny	MS023676

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGGGGAGACATTCTCAATCTCAGGAGGAGCGGTGGGCAATGGAAGGGCGATTGATGGGAAAATGGTGCAGACTTTTCAGAAGAAGTTGGTTGAAGTTGAGAACATTTTGGACCAAAACAGATTGCTGATCAACGAAATTAACCAAAACCAGGAGTCGAAGATGGCCGACAACCTGGGCAGAAACGTGGGTCTCATCCGCGAGCTCAACAACAACATCAGAAGGGTTGTGGATTTGTACGCCGACCTCACCAAATCCATGGAACCCGACGCCAAGCCTGGCCACAAGCGGATCCGACCTCCT

mRNA sequence

ATGGAGGGGGAGACATTCTCAATCTCAGGAGGAGCGGTGGGCAATGGAAGGGCGATTGATGGGAAAATGGTGCAGACTTTTCAGAAGAAGTTGGTTGAAGTTGAGAACATTTTGGACCAAAACAGATTGCTGATCAACGAAATTAACCAAAACCAGGAGTCGAAGATGGCCGACAACCTGGGCAGAAACGTGGGTCTCATCCGCGAGCTCAACAACAACATCAGAAGGGTTGTGGATTTGTACGCCGACCTCACCAAATCCATGGAACCCGACGCCAAGCCTGGCCACAAGCGGATCCGACCTCCT

Coding sequence (CDS)

ATGGAGGGGGAGACATTCTCAATCTCAGGAGGAGCGGTGGGCAATGGAAGGGCGATTGATGGGAAAATGGTGCAGACTTTTCAGAAGAAGTTGGTTGAAGTTGAGAACATTTTGGACCAAAACAGATTGCTGATCAACGAAATTAACCAAAACCAGGAGTCGAAGATGGCCGACAACCTGGGCAGAAACGTGGGTCTCATCCGCGAGCTCAACAACAACATCAGAAGGGTTGTGGATTTGTACGCCGACCTCACCAAATCCATGGAACCCGACGCCAAGCCTGGCCACAAGCGGATCCGACCTCCT

Protein sequence

MEGETFSISGGAVGNGRAIDGKMVQTFQKKLVEVENILDQNRLLINEINQNQESKMADNLGRNVGLIRELNNNIRRVVDLYADLTKSMEPDAKPGHKRIRPP

Homology

[Close]

BLAST of MS023676 vs. NCBI nr
Match: XP_022154645.1 (protein ELF4-LIKE 3-like isoform X2 [Momordica charantia] >XP_022154646.1 protein ELF4-LIKE 3-like isoform X2 [Momordica charantia] >XP_022154647.1 protein ELF4-LIKE 3-like isoform X2 [Momordica charantia])

HSP 1 Score: 193.4 bits (490), Expect = 9.9e-46
Identity = 99/102 (97.06%), Postives = 100/102 (98.04%), Query Frame = 0


Query: 1   MEGETFSISGGAVGNGRAIDGKMVQTFQKKLVEVENILDQNRLLINEINQNQESKMADNL 60
           MEGETFSISGGAVGNGRAIDGKMVQTFQKKLVEVE ILDQNRLLINEINQNQESKMADNL
Sbjct: 1   MEGETFSISGGAVGNGRAIDGKMVQTFQKKLVEVEKILDQNRLLINEINQNQESKMADNL 60

Query: 61  GRNVGLIRELNNNIRRVVDLYADLTKSMEPDAKPGHKRIRPP 103
           GRNVGLIRELNNNIRRVVDLYADLTKSMEPDAKPG+KR RPP
Sbjct: 61  GRNVGLIRELNNNIRRVVDLYADLTKSMEPDAKPGYKRNRPP 102

[Close]

BLAST of MS023676 vs. NCBI nr
Match: XP_022946747.1 (protein ELF4-LIKE 3-like [Cucurbita moschata] >XP_022946748.1 protein ELF4-LIKE 3-like [Cucurbita moschata] >XP_022999232.1 protein ELF4-LIKE 3-like [Cucurbita maxima] >XP_022999233.1 protein ELF4-LIKE 3-like [Cucurbita maxima] >XP_022999234.1 protein ELF4-LIKE 3-like [Cucurbita maxima] >XP_022999235.1 protein ELF4-LIKE 3-like [Cucurbita maxima] >KAG7030507.1 Protein ELF4-LIKE 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 146.4 bits (368), Expect = 1.4e-31
Identity = 82/112 (73.21%), Postives = 87/112 (77.68%), Query Frame = 0


Query: 1   MEGETFSISGGAVGNGRAIDGKMVQTFQKKLVEVENILDQNRLLINEINQNQESKMADNL 60
           MEGET  +S G +GNGR +DGKM QTFQK  V+V+NILDQNRLLINEINQN ESKM DNL
Sbjct: 1   MEGET--LSSGGMGNGRQMDGKMAQTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNL 60

Query: 61  GRNVGLIRELNNNIRRVVDLYADL----TKSMEPD------AKPGHKRIRPP 103
            RNVGLIRELNNNIRRVVDLYA L    TKSME        AKPGHKR RPP
Sbjct: 61  ARNVGLIRELNNNIRRVVDLYAHLSASFTKSMEASSEGNSAAKPGHKRNRPP 110

[Close]

BLAST of MS023676 vs. NCBI nr
Match: XP_023521403.1 (protein ELF4-LIKE 3-like isoform X3 [Cucurbita pepo subsp. pepo] >XP_023521404.1 protein ELF4-LIKE 3-like isoform X3 [Cucurbita pepo subsp. pepo] >XP_023546933.1 protein ELF4-LIKE 3-like isoform X3 [Cucurbita pepo subsp. pepo] >XP_023546934.1 protein ELF4-LIKE 3-like isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 144.4 bits (363), Expect = 5.3e-31
Identity = 81/112 (72.32%), Postives = 86/112 (76.79%), Query Frame = 0


Query: 1   MEGETFSISGGAVGNGRAIDGKMVQTFQKKLVEVENILDQNRLLINEINQNQESKMADNL 60
           MEGET  +S G +GNGR +DGKM  TFQK  V+V+NILDQNRLLINEINQN ESKM DNL
Sbjct: 1   MEGET--LSSGGMGNGRQMDGKMAHTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNL 60

Query: 61  GRNVGLIRELNNNIRRVVDLYADL----TKSMEPD------AKPGHKRIRPP 103
            RNVGLIRELNNNIRRVVDLYA L    TKSME        AKPGHKR RPP
Sbjct: 61  ARNVGLIRELNNNIRRVVDLYAHLSASFTKSMEASSEGNSAAKPGHKRNRPP 110

[Close]

BLAST of MS023676 vs. NCBI nr
Match: KAG6586485.1 (Protein ELF4-LIKE 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 143.7 bits (361), Expect = 9.0e-31
Identity = 83/117 (70.94%), Postives = 87/117 (74.36%), Query Frame = 0


Query: 1   MEGETFSISGGAVGNGRAIDGKMVQTFQKKLVEVENILDQNRLLINEINQNQESKMADNL 60
           MEGET S SGG VGNG  I+G MVQTFQK  V+V+ ILDQNR+LINEINQNQESKM  NL
Sbjct: 1   MEGETVS-SGGGVGNGSQIEGNMVQTFQKNFVQVQTILDQNRVLINEINQNQESKMPHNL 60

Query: 61  GRNVGLIRELNNNIRRVVDLYADL----TKSMEPD-----------AKPGHKRIRPP 103
            RNVGLIRELNNNIRRVVDLYA L    TKSMEP            AKPGHKR RPP
Sbjct: 61  TRNVGLIRELNNNIRRVVDLYAHLSTSFTKSMEPSSEGDSSSSAAAAKPGHKRNRPP 116

[Close]

BLAST of MS023676 vs. NCBI nr
Match: XP_021661935.1 (protein ELF4-LIKE 3-like [Hevea brasiliensis])

HSP 1 Score: 140.2 bits (352), Expect = 9.9e-30
Identity = 80/117 (68.38%), Postives = 87/117 (74.36%), Query Frame = 0


Query: 1   MEGETFSISGGAVGNGRAIDGKMVQTFQKKLVEVENILDQNRLLINEINQNQESKMADNL 60
           MEG+TFS     +GNG  IDGK++QTFQK  V+V+NILDQNRLLINEINQN ESK+ DNL
Sbjct: 1   MEGDTFS----GLGNGTQIDGKILQTFQKNFVQVQNILDQNRLLINEINQNHESKIPDNL 60

Query: 61  GRNVGLIRELNNNIRRVVDLYADL----TKSME------------PDAKPGHKRIRP 102
           GRNVGLIRELNNNIRRVVDLYADL    TKSME             DAK GHKR RP
Sbjct: 61  GRNVGLIRELNNNIRRVVDLYADLSSSFTKSMEVSSEGDSSGALKSDAKAGHKRNRP 113

[Close]

BLAST of MS023676 vs. ExPASy Swiss-Prot
Match: Q8S8F5 (Protein ELF4-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=EFL3 PE=3 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 6.9e-26
Identity = 66/111 (59.46%), Postives = 82/111 (73.87%), Query Frame = 0


Query: 1   MEGETFSISGGAVGNGRAIDGKMVQTFQKKLVEVENILDQNRLLINEINQNQESKMADNL 60
           MEG+T S     +G+G  +DGK++QTF+K  V+V+NILD NRLLINEINQN ESK+ DNL
Sbjct: 1   MEGDTIS---RMMGSGVQMDGKILQTFEKSFVQVQNILDHNRLLINEINQNHESKIPDNL 60

Query: 61  GRNVGLIRELNNNIRRVVDLYADL----TKSMEPDAK------PGHKRIRP 102
           GRNVGLIRELNNN+RRV  LY DL    +KSME  ++       G++RIRP
Sbjct: 61  GRNVGLIRELNNNVRRVAHLYVDLSNNFSKSMEASSEGDSSEGRGNRRIRP 108

[Close]

BLAST of MS023676 vs. ExPASy Swiss-Prot
Match: Q570U6 (Protein ELF4-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=EFL4 PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 5.5e-23
Identity = 56/87 (64.37%), Postives = 67/87 (77.01%), Query Frame = 0


Query: 1  MEGETFSISGGAVGNGRAIDGKMVQTFQKKLVEVENILDQNRLLINEINQNQESKMADNL 60
          MEG+  S      G+   +DGK++Q+FQK  V+V++ILDQNRLLINEINQN ESK  DNL
Sbjct: 1  MEGDVLS----GFGDRHNMDGKLLQSFQKSFVDVQDILDQNRLLINEINQNHESKQPDNL 60

Query: 61 GRNVGLIRELNNNIRRVVDLYADLTKS 88
          GRNVGLI+ELNNNIRRV  LY DL+ S
Sbjct: 61 GRNVGLIKELNNNIRRVASLYGDLSHS 83

[Close]

BLAST of MS023676 vs. ExPASy Swiss-Prot
Match: Q94BS8 (Protein ELF4-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=EFL2 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.2e-22
Identity = 56/87 (64.37%), Postives = 66/87 (75.86%), Query Frame = 0


Query: 1  MEGETFSISGGAVGNGRAIDGKMVQTFQKKLVEVENILDQNRLLINEINQNQESKMADNL 60
          MEG+ +S      G    +DGK++Q FQK  V+V++ILDQNRLLINEINQN ESK AD+L
Sbjct: 5  MEGDVYS----GFGERYQMDGKLLQNFQKSFVQVQDILDQNRLLINEINQNHESKQADHL 64

Query: 61 GRNVGLIRELNNNIRRVVDLYADLTKS 88
          GRNVGLIRELNNNIR V  LY DL+ S
Sbjct: 65 GRNVGLIRELNNNIRTVASLYGDLSHS 87

[Close]

BLAST of MS023676 vs. ExPASy Swiss-Prot
Match: O04211 (Protein EARLY FLOWERING 4 OS=Arabidopsis thaliana OX=3702 GN=ELF4 PE=1 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 2.8e-11
Identity = 34/80 (42.50%), Postives = 52/80 (65.00%), Query Frame = 0


Query: 20  DGKMVQTFQKKLVEVENILDQNRLLINEINQNQESKMADNLGRNVGLIRELNNNIRRVVD 79
           D  M +   +   +V+++LD+NR LI ++N N +S+MADN+ +NV LI+ELN NI +VV+
Sbjct: 22  DPAMWENLDRNFRQVQSVLDRNRSLIQQVNDNHQSRMADNMSKNVALIQELNGNISKVVN 81

Query: 80  LYADLTKSMEP---DAKPGH 97
           +Y+DL  S        K GH
Sbjct: 82  MYSDLNTSFSSGFHGGKNGH 101

[Close]

BLAST of MS023676 vs. ExPASy Swiss-Prot
Match: O80877 (Protein ELF4-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=EFL1 PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 6.5e-08
Identity = 28/66 (42.42%), Postives = 43/66 (65.15%), Query Frame = 0


Query: 20 DGKMVQTFQKKLVEVENILDQNRLLINEINQNQESKMADNLGRNVGLIRELNNNIRRVVD 79
          D ++  T        +  LDQNR LI  +N+N  S++ DN+ RNVGLI E+N NI +V++
Sbjct: 34 DVEVWDTLSNGFKRAQLYLDQNRDLIQRVNENHMSRIPDNVSRNVGLINEINGNISQVME 93

Query: 80 LYADLT 86
          +Y+DL+
Sbjct: 94 IYSDLS 99

[Close]

BLAST of MS023676 vs. ExPASy TrEMBL
Match: A0A6J1DK73 (protein ELF4-LIKE 3-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111021856 PE=3 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 4.8e-46
Identity = 99/102 (97.06%), Postives = 100/102 (98.04%), Query Frame = 0


Query: 1   MEGETFSISGGAVGNGRAIDGKMVQTFQKKLVEVENILDQNRLLINEINQNQESKMADNL 60
           MEGETFSISGGAVGNGRAIDGKMVQTFQKKLVEVE ILDQNRLLINEINQNQESKMADNL
Sbjct: 1   MEGETFSISGGAVGNGRAIDGKMVQTFQKKLVEVEKILDQNRLLINEINQNQESKMADNL 60

Query: 61  GRNVGLIRELNNNIRRVVDLYADLTKSMEPDAKPGHKRIRPP 103
           GRNVGLIRELNNNIRRVVDLYADLTKSMEPDAKPG+KR RPP
Sbjct: 61  GRNVGLIRELNNNIRRVVDLYADLTKSMEPDAKPGYKRNRPP 102

[Close]

BLAST of MS023676 vs. ExPASy TrEMBL
Match: A0A6J1KJ14 (protein ELF4-LIKE 3-like OS=Cucurbita maxima OX=3661 GN=LOC111493668 PE=3 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 6.7e-32
Identity = 82/112 (73.21%), Postives = 87/112 (77.68%), Query Frame = 0


Query: 1   MEGETFSISGGAVGNGRAIDGKMVQTFQKKLVEVENILDQNRLLINEINQNQESKMADNL 60
           MEGET  +S G +GNGR +DGKM QTFQK  V+V+NILDQNRLLINEINQN ESKM DNL
Sbjct: 1   MEGET--LSSGGMGNGRQMDGKMAQTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNL 60

Query: 61  GRNVGLIRELNNNIRRVVDLYADL----TKSMEPD------AKPGHKRIRPP 103
            RNVGLIRELNNNIRRVVDLYA L    TKSME        AKPGHKR RPP
Sbjct: 61  ARNVGLIRELNNNIRRVVDLYAHLSASFTKSMEASSEGNSAAKPGHKRNRPP 110

[Close]

BLAST of MS023676 vs. ExPASy TrEMBL
Match: A0A6J1G4K6 (protein ELF4-LIKE 3-like OS=Cucurbita moschata OX=3662 GN=LOC111450723 PE=3 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 6.7e-32
Identity = 82/112 (73.21%), Postives = 87/112 (77.68%), Query Frame = 0


Query: 1   MEGETFSISGGAVGNGRAIDGKMVQTFQKKLVEVENILDQNRLLINEINQNQESKMADNL 60
           MEGET  +S G +GNGR +DGKM QTFQK  V+V+NILDQNRLLINEINQN ESKM DNL
Sbjct: 1   MEGET--LSSGGMGNGRQMDGKMAQTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNL 60

Query: 61  GRNVGLIRELNNNIRRVVDLYADL----TKSMEPD------AKPGHKRIRPP 103
            RNVGLIRELNNNIRRVVDLYA L    TKSME        AKPGHKR RPP
Sbjct: 61  ARNVGLIRELNNNIRRVVDLYAHLSASFTKSMEASSEGNSAAKPGHKRNRPP 110

[Close]

BLAST of MS023676 vs. ExPASy TrEMBL
Match: A0A2C9W4E0 (Elf4 domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_03G038900 PE=3 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 2.4e-29
Identity = 79/117 (67.52%), Postives = 86/117 (73.50%), Query Frame = 0


Query: 1   MEGETFSISGGAVGNGRAIDGKMVQTFQKKLVEVENILDQNRLLINEINQNQESKMADNL 60
           MEG+TFS     +GNG  IDGK++QTFQK  V+V+NILDQNRLLINEINQN ESK+ DNL
Sbjct: 1   MEGDTFS----GLGNGTQIDGKILQTFQKNFVQVQNILDQNRLLINEINQNHESKIPDNL 60

Query: 61  GRNVGLIRELNNNIRRVVDLYADL----TKSME------------PDAKPGHKRIRP 102
            RNVGLIRELNNNIRRVVDLYADL    TKSME             DAK GHKR RP
Sbjct: 61  SRNVGLIRELNNNIRRVVDLYADLSSSFTKSMEASSEGDSSGALKSDAKAGHKRNRP 113

[Close]

BLAST of MS023676 vs. ExPASy TrEMBL
Match: A0A6J5Y214 (Elf4 domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS46293 PE=3 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 3.1e-29
Identity = 78/117 (66.67%), Postives = 86/117 (73.50%), Query Frame = 0


Query: 1   MEGETFSISGGAVGNGRAIDGKMVQTFQKKLVEVENILDQNRLLINEINQNQESKMADNL 60
           MEG+TFS     +GNG  IDGK++QTFQK  V+V+NILDQNRLLINEIN N ESK+ DNL
Sbjct: 1   MEGDTFS----GLGNGTQIDGKVLQTFQKSFVQVQNILDQNRLLINEINHNHESKIPDNL 60

Query: 61  GRNVGLIRELNNNIRRVVDLYADL----TKSME------------PDAKPGHKRIRP 102
            RNVGLIRELNNNIRRVVDLYADL    TKSM+             DAK GHKRIRP
Sbjct: 61  SRNVGLIRELNNNIRRVVDLYADLSSSFTKSMDTSSEGDSSGALKSDAKAGHKRIRP 113

[Close]

BLAST of MS023676 vs. TAIR 10
Match: AT2G06255.1 (ELF4-like 3 )

HSP 1 Score: 117.9 bits (294), Expect = 4.9e-27
Identity = 66/111 (59.46%), Postives = 82/111 (73.87%), Query Frame = 0


Query: 1   MEGETFSISGGAVGNGRAIDGKMVQTFQKKLVEVENILDQNRLLINEINQNQESKMADNL 60
           MEG+T S     +G+G  +DGK++QTF+K  V+V+NILD NRLLINEINQN ESK+ DNL
Sbjct: 1   MEGDTIS---RMMGSGVQMDGKILQTFEKSFVQVQNILDHNRLLINEINQNHESKIPDNL 60

Query: 61  GRNVGLIRELNNNIRRVVDLYADL----TKSMEPDAK------PGHKRIRP 102
           GRNVGLIRELNNN+RRV  LY DL    +KSME  ++       G++RIRP
Sbjct: 61  GRNVGLIRELNNNVRRVAHLYVDLSNNFSKSMEASSEGDSSEGRGNRRIRP 108

[Close]

BLAST of MS023676 vs. TAIR 10
Match: AT1G17455.1 (ELF4-like 4 )

HSP 1 Score: 108.2 bits (269), Expect = 3.9e-24
Identity = 56/87 (64.37%), Postives = 67/87 (77.01%), Query Frame = 0


Query: 1  MEGETFSISGGAVGNGRAIDGKMVQTFQKKLVEVENILDQNRLLINEINQNQESKMADNL 60
          MEG+  S      G+   +DGK++Q+FQK  V+V++ILDQNRLLINEINQN ESK  DNL
Sbjct: 1  MEGDVLS----GFGDRHNMDGKLLQSFQKSFVDVQDILDQNRLLINEINQNHESKQPDNL 60

Query: 61 GRNVGLIRELNNNIRRVVDLYADLTKS 88
          GRNVGLI+ELNNNIRRV  LY DL+ S
Sbjct: 61 GRNVGLIKELNNNIRRVASLYGDLSHS 83

[Close]

BLAST of MS023676 vs. TAIR 10
Match: AT1G17455.2 (ELF4-like 4 )

HSP 1 Score: 108.2 bits (269), Expect = 3.9e-24
Identity = 56/87 (64.37%), Postives = 67/87 (77.01%), Query Frame = 0


Query: 1  MEGETFSISGGAVGNGRAIDGKMVQTFQKKLVEVENILDQNRLLINEINQNQESKMADNL 60
          MEG+  S      G+   +DGK++Q+FQK  V+V++ILDQNRLLINEINQN ESK  DNL
Sbjct: 1  MEGDVLS----GFGDRHNMDGKLLQSFQKSFVDVQDILDQNRLLINEINQNHESKQPDNL 60

Query: 61 GRNVGLIRELNNNIRRVVDLYADLTKS 88
          GRNVGLI+ELNNNIRRV  LY DL+ S
Sbjct: 61 GRNVGLIKELNNNIRRVASLYGDLSHS 83

[Close]

BLAST of MS023676 vs. TAIR 10
Match: AT1G72630.1 (ELF4-like 2 )

HSP 1 Score: 107.1 bits (266), Expect = 8.7e-24
Identity = 56/87 (64.37%), Postives = 66/87 (75.86%), Query Frame = 0


Query: 1  MEGETFSISGGAVGNGRAIDGKMVQTFQKKLVEVENILDQNRLLINEINQNQESKMADNL 60
          MEG+ +S      G    +DGK++Q FQK  V+V++ILDQNRLLINEINQN ESK AD+L
Sbjct: 5  MEGDVYS----GFGERYQMDGKLLQNFQKSFVQVQDILDQNRLLINEINQNHESKQADHL 64

Query: 61 GRNVGLIRELNNNIRRVVDLYADLTKS 88
          GRNVGLIRELNNNIR V  LY DL+ S
Sbjct: 65 GRNVGLIRELNNNIRTVASLYGDLSHS 87

[Close]

BLAST of MS023676 vs. TAIR 10
Match: AT2G40080.1 (Protein of unknown function (DUF1313) )

HSP 1 Score: 69.3 bits (168), Expect = 2.0e-12
Identity = 34/80 (42.50%), Postives = 52/80 (65.00%), Query Frame = 0


Query: 20  DGKMVQTFQKKLVEVENILDQNRLLINEINQNQESKMADNLGRNVGLIRELNNNIRRVVD 79
           D  M +   +   +V+++LD+NR LI ++N N +S+MADN+ +NV LI+ELN NI +VV+
Sbjct: 22  DPAMWENLDRNFRQVQSVLDRNRSLIQQVNDNHQSRMADNMSKNVALIQELNGNISKVVN 81

Query: 80  LYADLTKSMEP---DAKPGH 97
           +Y+DL  S        K GH
Sbjct: 82  MYSDLNTSFSSGFHGGKNGH 101

The following BLAST results are available for this feature:

BLAST of MS023676 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022154645.1	9.9e-46	97.06	protein ELF4-LIKE 3-like isoform X2 [Momordica charantia] >XP_022154646.1 protei...	[more]
XP_022946747.1	1.4e-31	73.21	protein ELF4-LIKE 3-like [Cucurbita moschata] >XP_022946748.1 protein ELF4-LIKE ...	[more]
XP_023521403.1	5.3e-31	72.32	protein ELF4-LIKE 3-like isoform X3 [Cucurbita pepo subsp. pepo] >XP_023521404.1...	[more]
KAG6586485.1	9.0e-31	70.94	Protein ELF4-LIKE 3, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_021661935.1	9.9e-30	68.38	protein ELF4-LIKE 3-like [Hevea brasiliensis]	[more]

BLAST of MS023676 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S8F5	6.9e-26	59.46	Protein ELF4-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=EFL3 PE=3 SV=1	[more]
Q570U6	5.5e-23	64.37	Protein ELF4-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=EFL4 PE=2 SV=1	[more]
Q94BS8	1.2e-22	64.37	Protein ELF4-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=EFL2 PE=2 SV=1	[more]
O04211	2.8e-11	42.50	Protein EARLY FLOWERING 4 OS=Arabidopsis thaliana OX=3702 GN=ELF4 PE=1 SV=1	[more]
O80877	6.5e-08	42.42	Protein ELF4-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=EFL1 PE=2 SV=1	[more]

BLAST of MS023676 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DK73	4.8e-46	97.06	protein ELF4-LIKE 3-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC1110218...	[more]
A0A6J1KJ14	6.7e-32	73.21	protein ELF4-LIKE 3-like OS=Cucurbita maxima OX=3661 GN=LOC111493668 PE=3 SV=1	[more]
A0A6J1G4K6	6.7e-32	73.21	protein ELF4-LIKE 3-like OS=Cucurbita moschata OX=3662 GN=LOC111450723 PE=3 SV=1	[more]
A0A2C9W4E0	2.4e-29	67.52	Elf4 domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_03G038900 P...	[more]
A0A6J5Y214	3.1e-29	66.67	Elf4 domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS46293...	[more]

BLAST of MS023676 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G06255.1	4.9e-27	59.46	ELF4-like 3	[more]
AT1G17455.1	3.9e-24	64.37	ELF4-like 4	[more]
AT1G17455.2	3.9e-24	64.37	ELF4-like 4	[more]
AT1G72630.1	8.7e-24	64.37	ELF4-like 2	[more]
AT2G40080.1	2.0e-12	42.50	Protein of unknown function (DUF1313)	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 67..87
None	No IPR available	PANTHER	PTHR33469:SF17	PROTEIN ELF4-LIKE 3-LIKE	coord: 1..101
IPR009741	Protein EARLY FLOWERING 4 domain	PFAM	PF07011	Elf4	coord: 19..88 e-value: 2.2E-33 score: 114.0
IPR040462	Protein EARLY FLOWERING 4	PANTHER	PTHR33469	PROTEIN ELF4-LIKE 4	coord: 1..101

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS023676.1	MS023676.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042753	positive regulation of circadian rhythm