MS023114 (gene) Bitter gourd (TR) v1

Overview


Name	MS023114
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	PHD finger protein ALFIN-LIKE 3-like
Location	scaffold78: 258314 .. 259529 (-)
RNA-Seq Expression	MS023114
Synteny	MS023114

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGAAGGAGCTTCGACGGTGAAGAAGGTCTTCCAGGATTTCTTGGGACGACGAACCAGCATTGTCAAAGCTCTCACCCTCGGTCTCTCCCTTTCTCTTTCTTTAACTTTCTTTAATTTCCACGACGAGTTTCGGAGCCCTAATTTCGATTTAGACTTCATCTCTCTCGATCCATCACCGTTCTTCGCAGATGCCGAAGAATTCGCTTATTTTATTTCTTTAATTCTGTTTAATTTCCACGAAGATTTCCGGAGCCCTAATCTCTTGATCGATCGCCATTCTTCGCAGATGTTGAAGAATTCGTTCGGCAGTGCGATCTCGGTCAGTTCTCCCTCTCTCGGCCCTATCTCTCAAGATTTTGCGTCTGTTTCTGACATTGGCTACCTGATGAGGTTCAGAGGAAGAAGATGAAGTTTGCCTGTACGGACTTCCCGACGGAGAATGGAGAGTACGGAGTGCGTCTACGAAGGCAGCGACGAATCCGAGGCCAGAGCCTGCATCAGGAATTAACTTCGCGAGAGATGATCGGACTCAATTAAAGGACTGGTTGTTCCTTGTAGCTGCTCTTAGCGATGCTTGGTTGCTCTCTCTGGCCTTCTACAACGGTGCCTGTTATTTCGACAGAGTTCAGAGGTACTCAATCTCTCCATTCTCTGCTTCAATTTTTGTTGATTCGCCTTTTTTCTCTTTTTTGATCTTTGAAGTTTTATTTATTTCTATTTTTGTCCTTAAATCTTAATTTTGGCACTGTGATTCTTATTAAAATTTTGGTTTAGTTCATCCCTAACTCAATTCTAACTTCCTTCCCAACTCCAAGCCTAATCTAAATCCATTTTTCTACCAAAGAAAACATTCTAAATCCAATCTACTTGAACAAAGATATGTTCTAAAAAATTTTAGAAGTTGGTGCAGGCAATGCTTGTTTGGTATGATAAACGACATTCCCACAATACTGGAGACCATAACTAGAAGATACAAGTCTAGAAAGCCTCGCAAGACCATGGCGAGGGCAATGGAAACCAAGGAGGAAGATAATGAGATATGTGGGAGTTGTGAAAAGAAACCTAACCCAAACCAGAAAGAGTTTTGGATTTGTTGCGACTTTTGCGACACTTGGTTTCATGGCCAATGCGTAAAAATCACTCCTGATCAATCCACACAAATTCACAACTATAAGTGCCCATCCTGTAGTTACAAATGTAGATGTAGGAGG

mRNA sequence

ATGGAAGAAGGAGCTTCGACGGTGAAGAAGGTCTTCCAGGATTTCTTGGGACGACGAACCAGCATTGTCAAAGCTCTCACCCTCGAGGAAGAAGATGAAGTTTGCCTGTACGGACTTCCCGACGGAGAATGGAGAGTACGGAGTGCGTCTACGAAGGCAGCGACGAATCCGAGGCCAGAGCCTGCATCAGGAATTAACTTCGCGAGAGATGATCGGACTCAATTAAAGGACTGGTTGTTCCTTGTAGCTGCTCTTAGCGATGCTTGGTTGCTCTCTCTGGCCTTCTACAACGGTGCCTGTTATTTCGACAGAGTTCAGAGGCAATGCTTGTTTGGTATGATAAACGACATTCCCACAATACTGGAGACCATAACTAGAAGATACAAGTCTAGAAAGCCTCGCAAGACCATGGCGAGGGCAATGGAAACCAAGGAGGAAGATAATGAGATATGTGGGAGTTGTGAAAAGAAACCTAACCCAAACCAGAAAGAGTTTTGGATTTGTTGCGACTTTTGCGACACTTGGTTTCATGGCCAATGCGTAAAAATCACTCCTGATCAATCCACACAAATTCACAACTATAAGTGCCCATCCTGTAGTTACAAATGTAGATGTAGGAGG

Coding sequence (CDS)

ATGGAAGAAGGAGCTTCGACGGTGAAGAAGGTCTTCCAGGATTTCTTGGGACGACGAACCAGCATTGTCAAAGCTCTCACCCTCGAGGAAGAAGATGAAGTTTGCCTGTACGGACTTCCCGACGGAGAATGGAGAGTACGGAGTGCGTCTACGAAGGCAGCGACGAATCCGAGGCCAGAGCCTGCATCAGGAATTAACTTCGCGAGAGATGATCGGACTCAATTAAAGGACTGGTTGTTCCTTGTAGCTGCTCTTAGCGATGCTTGGTTGCTCTCTCTGGCCTTCTACAACGGTGCCTGTTATTTCGACAGAGTTCAGAGGCAATGCTTGTTTGGTATGATAAACGACATTCCCACAATACTGGAGACCATAACTAGAAGATACAAGTCTAGAAAGCCTCGCAAGACCATGGCGAGGGCAATGGAAACCAAGGAGGAAGATAATGAGATATGTGGGAGTTGTGAAAAGAAACCTAACCCAAACCAGAAAGAGTTTTGGATTTGTTGCGACTTTTGCGACACTTGGTTTCATGGCCAATGCGTAAAAATCACTCCTGATCAATCCACACAAATTCACAACTATAAGTGCCCATCCTGTAGTTACAAATGTAGATGTAGGAGG

Protein sequence

MEEGASTVKKVFQDFLGRRTSIVKALTLEEEDEVCLYGLPDGEWRVRSASTKAATNPRPEPASGINFARDDRTQLKDWLFLVAALSDAWLLSLAFYNGACYFDRVQRQCLFGMINDIPTILETITRRYKSRKPRKTMARAMETKEEDNEICGSCEKKPNPNQKEFWICCDFCDTWFHGQCVKITPDQSTQIHNYKCPSCSYKCRCRR

Homology

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BLAST of MS023114 vs. NCBI nr
Match: XP_022147579.1 (PHD finger protein ALFIN-LIKE 3-like [Momordica charantia])

HSP 1 Score: 429.1 bits (1102), Expect = 2.2e-116
Identity = 205/218 (94.04%), Postives = 206/218 (94.50%), Query Frame = 0


Query: 1   MEEGASTVKKVFQDFLGRRTSIVKALT-----------LEEEDEVCLYGLPDGEWRVRSA 60
           MEEGASTVKKVFQDFLGRRTSIVKALT           LEEEDEVCLYGLPDGEWRVRSA
Sbjct: 1   MEEGASTVKKVFQDFLGRRTSIVKALTLDVEEFVRQCDLEEEDEVCLYGLPDGEWRVRSA 60

Query: 61  STKAATNPRPEPASGINFARDDRTQLKDWLFLVAALSDAWLLSLAFYNGACYFDRVQRQC 120
           STKAATNPRPEPASGINFARDDRTQLKDWLFLVAALSDAWLLSLAFYNGACYFDRVQRQC
Sbjct: 61  STKAATNPRPEPASGINFARDDRTQLKDWLFLVAALSDAWLLSLAFYNGACYFDRVQRQC 120

Query: 121 LFGMINDIPTILETITRRYKSRKPRKTMARAMETKEEDNEICGSCEKKPNPNQKEFWICC 180
           LFGMINDIPTILETITRRYKSRKP KTMARAMETKEEDNEICGSC+KKPNPNQKEFWICC
Sbjct: 121 LFGMINDIPTILETITRRYKSRKPPKTMARAMETKEEDNEICGSCDKKPNPNQKEFWICC 180

Query: 181 DFCDTWFHGQCVKITPDQSTQIHNYKCPSCSYKCRCRR 208
           DFCDTWFHGQCVKITPDQSTQIHNYKCPSCSYKCRCRR
Sbjct: 181 DFCDTWFHGQCVKITPDQSTQIHNYKCPSCSYKCRCRR 218

[Close]

BLAST of MS023114 vs. NCBI nr
Match: XP_022962096.1 (PHD finger protein ALFIN-LIKE 4-like isoform X2 [Cucurbita moschata] >XP_023546199.1 PHD finger protein ALFIN-LIKE 4-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 194.9 bits (494), Expect = 6.9e-46
Identity = 104/223 (46.64%), Postives = 139/223 (62.33%), Query Frame = 0


Query: 7   TVKKVFQDFLGRRTSIVKALTLE----------EEDEVCLYGLPDGEWRVRSASTKAATN 66
           TV++VF+DF GRR  ++KALT +          E++ +CLYG P  +W V   + +    
Sbjct: 11  TVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEVNLPAEEVPPE 70

Query: 67  PRPEPASGINFARDDRTQLKDWLFLVAALSDAWLLSLAFYNGACY-FDRVQRQCLFGMIN 126
             PEPA GINFARD   Q KDWL LVA  SD WLLS+AFY GA + FD+  R+ LF MIN
Sbjct: 71  -LPEPALGINFARDG-MQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDRKRLFNMIN 130

Query: 127 DIPTILETIT---RRYKSRKPRKTMARAMETKEEDNE-------------ICGSCEKKPN 186
           D+PTI E +T   ++ +S +P+   A+A+++K+ED E             +CG+C +  N
Sbjct: 131 DLPTIFEVVTGTAKKQRSSEPQIKSAKAVQSKDEDEEGLEEEDEEEHGETLCGACGE--N 190

Query: 187 PNQKEFWICCDFCDTWFHGQCVKITPDQSTQIHNYKCPSCSYK 203
               EFWICCD C+ WFHG+CVKITP ++  I  YKCPSCS K
Sbjct: 191 YASDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNK 229

[Close]

BLAST of MS023114 vs. NCBI nr
Match: XP_022951576.1 (PHD finger protein ALFIN-LIKE 4-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 193.4 bits (490), Expect = 2.0e-45
Identity = 103/223 (46.19%), Postives = 138/223 (61.88%), Query Frame = 0


Query: 7   TVKKVFQDFLGRRTSIVKALTLE----------EEDEVCLYGLPDGEWRVRSASTKAATN 66
           TV++VF+DF GRR  ++KALT +          E++ +CLYG P  +W V   + +    
Sbjct: 11  TVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEVNLPAEEVPPE 70

Query: 67  PRPEPASGINFARDDRTQLKDWLFLVAALSDAWLLSLAFYNGACY-FDRVQRQCLFGMIN 126
             PEPA GINFARD   Q KDWL LVA  SD WLLS+AFY GA + FD+  R+ LF MIN
Sbjct: 71  -LPEPALGINFARDG-MQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDRKRLFNMIN 130

Query: 127 DIPTILETIT---RRYKSRKPRKTMARAMETKEEDNE-------------ICGSCEKKPN 186
           D+PTI E +T   ++ +S +P+    +A+++K+ED E             +CG+C +  N
Sbjct: 131 DLPTIFEVVTGTAKKQRSSEPQIKTTKAVQSKDEDEEGLDEEDEEEHGETLCGACGE--N 190

Query: 187 PNQKEFWICCDFCDTWFHGQCVKITPDQSTQIHNYKCPSCSYK 203
               EFWICCD C+ WFHG+CVKITP ++  I  YKCPSCS K
Sbjct: 191 YASDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNK 229

[Close]

BLAST of MS023114 vs. NCBI nr
Match: KAG6585765.1 (PHD finger protein ALFIN-LIKE 5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 193.4 bits (490), Expect = 2.0e-45
Identity = 103/223 (46.19%), Postives = 138/223 (61.88%), Query Frame = 0


Query: 7   TVKKVFQDFLGRRTSIVKALTLE----------EEDEVCLYGLPDGEWRVRSASTKAATN 66
           TV++VF+DF GRR  ++KALT +          E++ +CLYG P  +W V   + +    
Sbjct: 11  TVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEVNLPAEEVPPE 70

Query: 67  PRPEPASGINFARDDRTQLKDWLFLVAALSDAWLLSLAFYNGACY-FDRVQRQCLFGMIN 126
             PEPA GINFARD   Q KDWL LVA  SD WLLS+AFY GA + FD+  R+ LF MIN
Sbjct: 71  -LPEPALGINFARDG-MQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDRKRLFNMIN 130

Query: 127 DIPTILETIT---RRYKSRKPRKTMARAMETKEEDNE-------------ICGSCEKKPN 186
           D+PTI E +T   ++ +S +P+    +A+++K+ED E             +CG+C +  N
Sbjct: 131 DLPTIFEVVTGTAKKQRSSEPQIKSTKAVQSKDEDEEGLDEEDEEEHGETLCGACGE--N 190

Query: 187 PNQKEFWICCDFCDTWFHGQCVKITPDQSTQIHNYKCPSCSYK 203
               EFWICCD C+ WFHG+CVKITP ++  I  YKCPSCS K
Sbjct: 191 YASDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNK 229

[Close]

BLAST of MS023114 vs. NCBI nr
Match: XP_022997243.1 (PHD finger protein ALFIN-LIKE 4-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 193.4 bits (490), Expect = 2.0e-45
Identity = 103/223 (46.19%), Postives = 138/223 (61.88%), Query Frame = 0


Query: 7   TVKKVFQDFLGRRTSIVKALTLE----------EEDEVCLYGLPDGEWRVRSASTKAATN 66
           TV++VF+DF GRR  ++KALT +          E++ +CLYG P  +W V   + +    
Sbjct: 11  TVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEVNLPAEEVPPE 70

Query: 67  PRPEPASGINFARDDRTQLKDWLFLVAALSDAWLLSLAFYNGACY-FDRVQRQCLFGMIN 126
             PEPA GINFARD   Q KDWL LVA  SD WLLS+AFY GA + FD+  R+ LF MIN
Sbjct: 71  -LPEPALGINFARDG-MQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDRKRLFNMIN 130

Query: 127 DIPTILETIT---RRYKSRKPRKTMARAMETKEEDNE-------------ICGSCEKKPN 186
           D+PTI E +T   ++ +S +P+    +A+++K+ED E             +CG+C +  N
Sbjct: 131 DLPTIFEVVTGTAKKQRSSEPQIKSTKAVQSKDEDEEGLEEEDEEEHGETLCGACGE--N 190

Query: 187 PNQKEFWICCDFCDTWFHGQCVKITPDQSTQIHNYKCPSCSYK 203
               EFWICCD C+ WFHG+CVKITP ++  I  YKCPSCS K
Sbjct: 191 YASDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNK 229

[Close]

BLAST of MS023114 vs. ExPASy Swiss-Prot
Match: Q9M2B4 (PHD finger protein ALFIN-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=AL3 PE=1 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 1.2e-45
Identity = 110/250 (44.00%), Postives = 146/250 (58.40%), Query Frame = 0


Query: 1   MEEGAS-----TVKKVFQDFLGRRTSIVKALTLE----------EEDEVCLYGLPDGEWR 60
           ME GA+     TV++VF+DF GRRT+IVKALT +          E++ +CLYGLP+ EW 
Sbjct: 1   MEGGAALYNPRTVEEVFKDFKGRRTAIVKALTTDVQEFYQQCDPEKENLCLYGLPNEEWE 60

Query: 61  VRSASTKAATNPRPEPASGINFARDDRTQLKDWLFLVAALSDAWLLSLAFYNGACY-FDR 120
           V   + +      PEPA GINFARD  ++ K+WL LVA  SDAWLLS++FY G+ + F +
Sbjct: 61  VNLPAEEVPPE-LPEPALGINFARDGLSE-KEWLSLVAIHSDAWLLSVSFYFGSRFSFHK 120

Query: 121 VQRQCLFGMINDIPTILETITRRYKSR-----------------KPRKTMARAMET---K 180
            +R+ LF MIND+PTI E +T   K++                 K R +  ++ +T   K
Sbjct: 121 EERKRLFNMINDVPTIFEVVTGMAKAKDKSSAANQNGNKSKSNSKVRTSEGKSSKTKQPK 180

Query: 181 EEDNEI------------CGSCEKKPNPNQKEFWICCDFCDTWFHGQCVKITPDQSTQIH 203
           EED EI            CG+C      +  EFWICCD C+ WFHG+CVKITP ++  I 
Sbjct: 181 EEDEEIDEDDEDDHGETLCGACGDSDGAD--EFWICCDLCEKWFHGKCVKITPARAEHIK 240

[Close]

BLAST of MS023114 vs. ExPASy Swiss-Prot
Match: B8BJV8 (PHD finger protein ALFIN-LIKE 8 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_35671 PE=3 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 6.3e-42
Identity = 100/242 (41.32%), Postives = 132/242 (54.55%), Query Frame = 0


Query: 7   TVKKVFQDFLGRRTSIVKALTLE----------EEDEVCLYGLPDGEWRVRSASTKAATN 66
           T + VF+DF  RR  ++KALT +          E++ +CLYGLP+  W V   + +    
Sbjct: 9   TPEDVFRDFRARRAGMIKALTTDVEKFYQQCDPEKENLCLYGLPNETWEVNLPAEEVPPE 68

Query: 67  PRPEPASGINFARDDRTQLKDWLFLVAALSDAWLLSLAFYNGACY-FDRVQRQCLFGMIN 126
             PEPA GINFARD   + KDWL LVA  SD WLL++AFY GA + FD+  R+ LF MIN
Sbjct: 69  -LPEPALGINFARDGMDE-KDWLSLVAVHSDTWLLAVAFYFGARFGFDKESRKRLFSMIN 128

Query: 127 DIPTILETITRRYKSRKPRKTMARA----------------------------------- 186
           ++PTI E +T   K +   KT   +                                   
Sbjct: 129 NLPTIYEVVTGTAKKQSKEKTPKTSGKSNKSGTKPSRQPEPNSRGPKMPPPKDEDDSGGE 188

Query: 187 METKEEDNE--ICGSCEKKPNPNQKEFWICCDFCDTWFHGQCVKITPDQSTQIHNYKCPS 201
            E +EED+E  +CG+C    N  Q EFWICCD C+TWFHG+CVKITP ++  I +YKCP+
Sbjct: 189 EEEEEEDHENTLCGAC--GDNYGQDEFWICCDACETWFHGKCVKITPAKAEHIKHYKCPN 246

[Close]

BLAST of MS023114 vs. ExPASy Swiss-Prot
Match: Q2R837 (PHD finger protein ALFIN-LIKE 8 OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g0244800 PE=2 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 6.3e-42
Identity = 100/242 (41.32%), Postives = 132/242 (54.55%), Query Frame = 0


Query: 7   TVKKVFQDFLGRRTSIVKALTLE----------EEDEVCLYGLPDGEWRVRSASTKAATN 66
           T + VF+DF  RR  ++KALT +          E++ +CLYGLP+  W V   + +    
Sbjct: 9   TPEDVFRDFRARRAGMIKALTTDVEKFYQQCDPEKENLCLYGLPNETWEVNLPAEEVPPE 68

Query: 67  PRPEPASGINFARDDRTQLKDWLFLVAALSDAWLLSLAFYNGACY-FDRVQRQCLFGMIN 126
             PEPA GINFARD   + KDWL LVA  SD WLL++AFY GA + FD+  R+ LF MIN
Sbjct: 69  -LPEPALGINFARDGMDE-KDWLSLVAVHSDTWLLAVAFYFGARFGFDKESRKRLFSMIN 128

Query: 127 DIPTILETITRRYKSRKPRKTMARA----------------------------------- 186
           ++PTI E +T   K +   KT   +                                   
Sbjct: 129 NLPTIYEVVTGTAKKQSKEKTPKTSGKSNKSGTKPSRQPEPNSRGPKMPPPKDEDDSGGE 188

Query: 187 METKEEDNE--ICGSCEKKPNPNQKEFWICCDFCDTWFHGQCVKITPDQSTQIHNYKCPS 201
            E +EED+E  +CG+C    N  Q EFWICCD C+TWFHG+CVKITP ++  I +YKCP+
Sbjct: 189 EEEEEEDHENTLCGAC--GDNYGQDEFWICCDACETWFHGKCVKITPAKAEHIKHYKCPN 246

[Close]

BLAST of MS023114 vs. ExPASy Swiss-Prot
Match: B8B8C5 (PHD finger protein ALFIN-LIKE 9 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_26819 PE=3 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 8.2e-42
Identity = 101/254 (39.76%), Postives = 133/254 (52.36%), Query Frame = 0


Query: 7   TVKKVFQDFLGRRTSIVKALTLEEED----------EVCLYGLPDGEWRVRSASTKAATN 66
           TV++VF+DF GRR  +V+ALT + ED           +CLYG P+  W V   + +    
Sbjct: 9   TVEEVFRDFKGRRAGLVRALTADVEDFFRQCDPEKENLCLYGFPNEHWEVNLPAEEVPPE 68

Query: 67  PRPEPASGINFARDDRTQLKDWLFLVAALSDAWLLSLAFYNGACY-FDRVQRQCLFGMIN 126
             PEPA GINFARD   Q KDWL +VA  SDAWLLS+AFY GA + FD+  R+ LFGMIN
Sbjct: 69  -LPEPALGINFARDG-MQEKDWLSMVAVHSDAWLLSVAFYFGARFGFDKNDRKRLFGMIN 128

Query: 127 DIPTILETITRRYKSRKP----------------RKTMARAMETK--------------- 186
           D+PTI E ++ + K++ P                + +  RA + K               
Sbjct: 129 DLPTIFEVVSGKSKAKPPSANNHSNSKSKSSNKTKSSEPRAKQPKPQPQPPVKNEGREEE 188

Query: 187 ------------------EEDNEICGSCEKKPNPNQKEFWICCDFCDTWFHGQCVKITPD 201
                             E    +CG+C +    +  EFWICCD C+ WFHG+CVKITP 
Sbjct: 189 GGPDDEEGGGGGGGGREEEHGETLCGACGESYGAD--EFWICCDICEKWFHGKCVKITPA 248

[Close]

BLAST of MS023114 vs. ExPASy Swiss-Prot
Match: Q6YTY3 (PHD finger protein ALFIN-LIKE 9 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0608400 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.1e-41
Identity = 101/255 (39.61%), Postives = 133/255 (52.16%), Query Frame = 0


Query: 7   TVKKVFQDFLGRRTSIVKALTLEEED----------EVCLYGLPDGEWRVRSASTKAATN 66
           TV++VF+DF GRR  +V+ALT + ED           +CLYG P+  W V   + +    
Sbjct: 9   TVEEVFRDFKGRRAGLVRALTADVEDFFRQCDPEKENLCLYGFPNEHWEVNLPAEEVPPE 68

Query: 67  PRPEPASGINFARDDRTQLKDWLFLVAALSDAWLLSLAFYNGACY-FDRVQRQCLFGMIN 126
             PEPA GINFARD   Q KDWL +VA  SDAWLLS+AFY GA + FD+  R+ LFGMIN
Sbjct: 69  -LPEPALGINFARDG-MQEKDWLSMVAVHSDAWLLSVAFYFGARFGFDKNDRKRLFGMIN 128

Query: 127 DIPTILETITRRYKSRKP----------------RKTMARAMETK--------------- 186
           D+PTI E ++ + K++ P                + +  RA + K               
Sbjct: 129 DLPTIFEVVSGKSKAKPPSANNHSNSKSKSSNKTKSSEPRAKQPKPQPQPPVKNEGREEE 188

Query: 187 -------------------EEDNEICGSCEKKPNPNQKEFWICCDFCDTWFHGQCVKITP 201
                              E    +CG+C +    +  EFWICCD C+ WFHG+CVKITP
Sbjct: 189 GGPDDEEGGGGGGGGGREEEHGETLCGACGESYGAD--EFWICCDICEKWFHGKCVKITP 248

[Close]

BLAST of MS023114 vs. ExPASy TrEMBL
Match: A0A6J1D1F2 (PHD finger protein ALFIN-LIKE 3-like OS=Momordica charantia OX=3673 GN=LOC111016472 PE=3 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 1.0e-116
Identity = 205/218 (94.04%), Postives = 206/218 (94.50%), Query Frame = 0


Query: 1   MEEGASTVKKVFQDFLGRRTSIVKALT-----------LEEEDEVCLYGLPDGEWRVRSA 60
           MEEGASTVKKVFQDFLGRRTSIVKALT           LEEEDEVCLYGLPDGEWRVRSA
Sbjct: 1   MEEGASTVKKVFQDFLGRRTSIVKALTLDVEEFVRQCDLEEEDEVCLYGLPDGEWRVRSA 60

Query: 61  STKAATNPRPEPASGINFARDDRTQLKDWLFLVAALSDAWLLSLAFYNGACYFDRVQRQC 120
           STKAATNPRPEPASGINFARDDRTQLKDWLFLVAALSDAWLLSLAFYNGACYFDRVQRQC
Sbjct: 61  STKAATNPRPEPASGINFARDDRTQLKDWLFLVAALSDAWLLSLAFYNGACYFDRVQRQC 120

Query: 121 LFGMINDIPTILETITRRYKSRKPRKTMARAMETKEEDNEICGSCEKKPNPNQKEFWICC 180
           LFGMINDIPTILETITRRYKSRKP KTMARAMETKEEDNEICGSC+KKPNPNQKEFWICC
Sbjct: 121 LFGMINDIPTILETITRRYKSRKPPKTMARAMETKEEDNEICGSCDKKPNPNQKEFWICC 180

Query: 181 DFCDTWFHGQCVKITPDQSTQIHNYKCPSCSYKCRCRR 208
           DFCDTWFHGQCVKITPDQSTQIHNYKCPSCSYKCRCRR
Sbjct: 181 DFCDTWFHGQCVKITPDQSTQIHNYKCPSCSYKCRCRR 218

[Close]

BLAST of MS023114 vs. ExPASy TrEMBL
Match: A0A6J1HC47 (PHD finger protein ALFIN-LIKE 4-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111462656 PE=3 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 3.3e-46
Identity = 104/223 (46.64%), Postives = 139/223 (62.33%), Query Frame = 0


Query: 7   TVKKVFQDFLGRRTSIVKALTLE----------EEDEVCLYGLPDGEWRVRSASTKAATN 66
           TV++VF+DF GRR  ++KALT +          E++ +CLYG P  +W V   + +    
Sbjct: 11  TVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEVNLPAEEVPPE 70

Query: 67  PRPEPASGINFARDDRTQLKDWLFLVAALSDAWLLSLAFYNGACY-FDRVQRQCLFGMIN 126
             PEPA GINFARD   Q KDWL LVA  SD WLLS+AFY GA + FD+  R+ LF MIN
Sbjct: 71  -LPEPALGINFARDG-MQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDRKRLFNMIN 130

Query: 127 DIPTILETIT---RRYKSRKPRKTMARAMETKEEDNE-------------ICGSCEKKPN 186
           D+PTI E +T   ++ +S +P+   A+A+++K+ED E             +CG+C +  N
Sbjct: 131 DLPTIFEVVTGTAKKQRSSEPQIKSAKAVQSKDEDEEGLEEEDEEEHGETLCGACGE--N 190

Query: 187 PNQKEFWICCDFCDTWFHGQCVKITPDQSTQIHNYKCPSCSYK 203
               EFWICCD C+ WFHG+CVKITP ++  I  YKCPSCS K
Sbjct: 191 YASDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNK 229

[Close]

BLAST of MS023114 vs. ExPASy TrEMBL
Match: A0A6J1KDA9 (PHD finger protein ALFIN-LIKE 4-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111492205 PE=3 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 9.7e-46
Identity = 103/223 (46.19%), Postives = 138/223 (61.88%), Query Frame = 0


Query: 7   TVKKVFQDFLGRRTSIVKALTLE----------EEDEVCLYGLPDGEWRVRSASTKAATN 66
           TV++VF+DF GRR  ++KALT +          E++ +CLYG P  +W V   + +    
Sbjct: 11  TVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEVNLPAEEVPPE 70

Query: 67  PRPEPASGINFARDDRTQLKDWLFLVAALSDAWLLSLAFYNGACY-FDRVQRQCLFGMIN 126
             PEPA GINFARD   Q KDWL LVA  SD WLLS+AFY GA + FD+  R+ LF MIN
Sbjct: 71  -LPEPALGINFARDG-MQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDRKRLFNMIN 130

Query: 127 DIPTILETIT---RRYKSRKPRKTMARAMETKEEDNE-------------ICGSCEKKPN 186
           D+PTI E +T   ++ +S +P+    +A+++K+ED E             +CG+C +  N
Sbjct: 131 DLPTIFEVVTGTAKKQRSSEPQIKSTKAVQSKDEDEEGLEEEDEEEHGETLCGACGE--N 190

Query: 187 PNQKEFWICCDFCDTWFHGQCVKITPDQSTQIHNYKCPSCSYK 203
               EFWICCD C+ WFHG+CVKITP ++  I  YKCPSCS K
Sbjct: 191 YASDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNK 229

[Close]

BLAST of MS023114 vs. ExPASy TrEMBL
Match: A0A6J1GHY6 (PHD finger protein ALFIN-LIKE 4-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111454350 PE=3 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 9.7e-46
Identity = 103/223 (46.19%), Postives = 138/223 (61.88%), Query Frame = 0


Query: 7   TVKKVFQDFLGRRTSIVKALTLE----------EEDEVCLYGLPDGEWRVRSASTKAATN 66
           TV++VF+DF GRR  ++KALT +          E++ +CLYG P  +W V   + +    
Sbjct: 11  TVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEVNLPAEEVPPE 70

Query: 67  PRPEPASGINFARDDRTQLKDWLFLVAALSDAWLLSLAFYNGACY-FDRVQRQCLFGMIN 126
             PEPA GINFARD   Q KDWL LVA  SD WLLS+AFY GA + FD+  R+ LF MIN
Sbjct: 71  -LPEPALGINFARDG-MQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDRKRLFNMIN 130

Query: 127 DIPTILETIT---RRYKSRKPRKTMARAMETKEEDNE-------------ICGSCEKKPN 186
           D+PTI E +T   ++ +S +P+    +A+++K+ED E             +CG+C +  N
Sbjct: 131 DLPTIFEVVTGTAKKQRSSEPQIKTTKAVQSKDEDEEGLDEEDEEEHGETLCGACGE--N 190

Query: 187 PNQKEFWICCDFCDTWFHGQCVKITPDQSTQIHNYKCPSCSYK 203
               EFWICCD C+ WFHG+CVKITP ++  I  YKCPSCS K
Sbjct: 191 YASDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNK 229

[Close]

BLAST of MS023114 vs. ExPASy TrEMBL
Match: A0A6J1KTZ5 (PHD finger protein ALFIN-LIKE 4-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111496393 PE=3 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 1.3e-45
Identity = 103/223 (46.19%), Postives = 137/223 (61.43%), Query Frame = 0


Query: 7   TVKKVFQDFLGRRTSIVKALTLE----------EEDEVCLYGLPDGEWRVRSASTKAATN 66
           TV++VF DF GRR  ++KALT +          E++ +CLYG P  +W V   + +    
Sbjct: 11  TVEEVFMDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEVNLPAEEVPPE 70

Query: 67  PRPEPASGINFARDDRTQLKDWLFLVAALSDAWLLSLAFYNGACY-FDRVQRQCLFGMIN 126
             PEPA GINFARD   Q KDWL LVA  SD WLLS+AFY GA + FD+  R+ LF MIN
Sbjct: 71  -LPEPALGINFARDG-MQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDRKRLFNMIN 130

Query: 127 DIPTILETIT---RRYKSRKPRKTMARAMETKEEDNE-------------ICGSCEKKPN 186
           D+PTI E +T   ++ +S +P+    +A+++K+ED E             +CG+C +  N
Sbjct: 131 DLPTIFEVVTGTAKKQRSSEPQIKSTKAVQSKDEDEEGLDEEDEEEHGETLCGACGE--N 190

Query: 187 PNQKEFWICCDFCDTWFHGQCVKITPDQSTQIHNYKCPSCSYK 203
               EFWICCD C+ WFHG+CVKITP ++  I  YKCPSCS K
Sbjct: 191 YASDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNK 229

[Close]

BLAST of MS023114 vs. TAIR 10
Match: AT3G42790.1 (alfin-like 3 )

HSP 1 Score: 184.5 bits (467), Expect = 8.7e-47
Identity = 110/250 (44.00%), Postives = 146/250 (58.40%), Query Frame = 0


Query: 1   MEEGAS-----TVKKVFQDFLGRRTSIVKALTLE----------EEDEVCLYGLPDGEWR 60
           ME GA+     TV++VF+DF GRRT+IVKALT +          E++ +CLYGLP+ EW 
Sbjct: 1   MEGGAALYNPRTVEEVFKDFKGRRTAIVKALTTDVQEFYQQCDPEKENLCLYGLPNEEWE 60

Query: 61  VRSASTKAATNPRPEPASGINFARDDRTQLKDWLFLVAALSDAWLLSLAFYNGACY-FDR 120
           V   + +      PEPA GINFARD  ++ K+WL LVA  SDAWLLS++FY G+ + F +
Sbjct: 61  VNLPAEEVPPE-LPEPALGINFARDGLSE-KEWLSLVAIHSDAWLLSVSFYFGSRFSFHK 120

Query: 121 VQRQCLFGMINDIPTILETITRRYKSR-----------------KPRKTMARAMET---K 180
            +R+ LF MIND+PTI E +T   K++                 K R +  ++ +T   K
Sbjct: 121 EERKRLFNMINDVPTIFEVVTGMAKAKDKSSAANQNGNKSKSNSKVRTSEGKSSKTKQPK 180

Query: 181 EEDNEI------------CGSCEKKPNPNQKEFWICCDFCDTWFHGQCVKITPDQSTQIH 203
           EED EI            CG+C      +  EFWICCD C+ WFHG+CVKITP ++  I 
Sbjct: 181 EEDEEIDEDDEDDHGETLCGACGDSDGAD--EFWICCDLCEKWFHGKCVKITPARAEHIK 240

[Close]

BLAST of MS023114 vs. TAIR 10
Match: AT1G14510.1 (alfin-like 7 )

HSP 1 Score: 170.2 bits (430), Expect = 1.7e-42
Identity = 99/239 (41.42%), Postives = 134/239 (56.07%), Query Frame = 0


Query: 7   TVKKVFQDFLGRRTSIVKALTLE----------EEDEVCLYGLPDGEWRVRSASTKAATN 66
           TV++VF DF GRR  ++KAL+ +          E++ +CLYGLP+  W V +   +    
Sbjct: 11  TVEEVFSDFRGRRAGLIKALSTDVQKFYHQCDPEKENLCLYGLPNETWEV-NLPVEEVPP 70

Query: 67  PRPEPASGINFARDDRTQLKDWLFLVAALSDAWLLSLAFYNGACY-FDRVQRQCLFGMIN 126
             PEPA GINFARD   Q KDW+ LVA  SD+WL+S+AFY GA + F + +R+ LF MIN
Sbjct: 71  ELPEPALGINFARDG-MQEKDWISLVAVHSDSWLISVAFYFGARFGFGKNERKRLFQMIN 130

Query: 127 DIPTILETITRRYKSR-----------------KPRKTMARAMETK-------------- 186
           D+PTI E +T   K                   KPR + +    +K              
Sbjct: 131 DLPTIFEVVTGNAKQSKDQSANHNSSRSKSSGGKPRHSESHTKASKMSPPPRKEDESGDE 190

Query: 187 EEDNE---ICGSCEKKPNPNQKEFWICCDFCDTWFHGQCVKITPDQSTQIHNYKCPSCS 201
           +ED+E   +CG+C    N    EFWICCD C+ WFHG+CVKITP ++  I +YKCPSC+
Sbjct: 191 DEDDEQGAVCGAC--GDNYGGDEFWICCDACEKWFHGKCVKITPAKAEHIKHYKCPSCT 245

[Close]

BLAST of MS023114 vs. TAIR 10
Match: AT2G02470.2 (alfin-like 6 )

HSP 1 Score: 169.9 bits (429), Expect = 2.2e-42
Identity = 98/237 (41.35%), Postives = 132/237 (55.70%), Query Frame = 0


Query: 7   TVKKVFQDFLGRRTSIVKALTLE----------EEDEVCLYGLPDGEWRVRSASTKAATN 66
           TV++VF DF GRR  ++KALT +          E++ +CLYGLP+  W V +   +    
Sbjct: 11  TVEEVFSDFRGRRAGLIKALTNDMVKFYQTCDPEKENLCLYGLPNETWEV-NLPVEEVPP 70

Query: 67  PRPEPASGINFARDDRTQLKDWLFLVAALSDAWLLSLAFYNGACY-FDRVQRQCLFGMIN 126
             PEPA GINFARD   Q KDW+ LVA  SD+WLLS+AFY GA + F + +R+ LF MIN
Sbjct: 71  ELPEPALGINFARDG-MQEKDWVSLVAVHSDSWLLSVAFYFGARFGFGKNERKRLFQMIN 130

Query: 127 DIPTILETITRRYKSRK------------------------PRKTMARAMETKEEDNE-- 186
           ++PTI E ++   K  K                        P K      +  E+++E  
Sbjct: 131 ELPTIFEVVSGNAKQSKDLSVNNNNSKSKPSGVKVAKMSSPPPKEEEEEEDESEDESEDD 190

Query: 187 ----ICGSCEKKPNPNQKEFWICCDFCDTWFHGQCVKITPDQSTQIHNYKCPSCSYK 203
               +CG+C    N    EFWICCD C+ WFHG+CVKITP ++  I +YKCP+CS K
Sbjct: 191 EQGAVCGAC--GDNYGTDEFWICCDACEKWFHGKCVKITPAKAEHIKHYKCPTCSNK 243

[Close]

BLAST of MS023114 vs. TAIR 10
Match: AT5G26210.1 (alfin-like 4 )

HSP 1 Score: 169.9 bits (429), Expect = 2.2e-42
Identity = 102/255 (40.00%), Postives = 139/255 (54.51%), Query Frame = 0


Query: 1   MEEGAS----TVKKVFQDFLGRRTSIVKALTLE----------EEDEVCLYGLPDGEWRV 60
           ME G +    TV++VF+DF GRR  ++KALT +          E++ +CLYG P+  W V
Sbjct: 1   MEAGGAYNPRTVEEVFRDFKGRRAGMIKALTTDVQEFFRLCDPEKENLCLYGHPNEHWEV 60

Query: 61  RSASTKAATNPRPEPASGINFARDDRTQLKDWLFLVAALSDAWLLSLAFYNGACY-FDRV 120
              + +      PEP  GINFARD   + KDWL LVA  SDAWLL++AF+ GA + FD+ 
Sbjct: 61  NLPAEEVPPE-LPEPVLGINFARDGMAE-KDWLSLVAVHSDAWLLAVAFFFGARFGFDKA 120

Query: 121 QRQCLFGMINDIPTILETI------------------TRRYKSRKPRKTMARA------- 180
            R+ LF M+ND+PTI E +                  + R KS   R + +RA       
Sbjct: 121 DRKRLFNMVNDLPTIFEVVAGTAKKQGKDKSSVSNNSSNRSKSSSKRGSESRAKFSKPEP 180

Query: 181 ----------METKEEDNE---ICGSCEKKPNPNQKEFWICCDFCDTWFHGQCVKITPDQ 203
                     +E ++ED +    CG+C +    +  EFWICCD C+ WFHG+CVKITP +
Sbjct: 181 KDDEEEEEEGVEEEDEDEQGETQCGACGESYAAD--EFWICCDLCEMWFHGKCVKITPAR 240

[Close]

BLAST of MS023114 vs. TAIR 10
Match: AT2G02470.1 (alfin-like 6 )

HSP 1 Score: 168.3 bits (425), Expect = 6.4e-42
Identity = 101/246 (41.06%), Postives = 134/246 (54.47%), Query Frame = 0


Query: 7   TVKKVFQDFLGRRTSIVKALTLE----------EEDEVCLYGLPDGEWRVRSASTKAATN 66
           TV++VF DF GRR  ++KALT +          E++ +CLYGLP+  W V +   +    
Sbjct: 11  TVEEVFSDFRGRRAGLIKALTNDMVKFYQTCDPEKENLCLYGLPNETWEV-NLPVEEVPP 70

Query: 67  PRPEPASGINFARDDRTQLKDWLFLVAALSDAWLLSLAFYNGACY-FDRVQRQCLFGMIN 126
             PEPA GINFARD   Q KDW+ LVA  SD+WLLS+AFY GA + F + +R+ LF MIN
Sbjct: 71  ELPEPALGINFARDG-MQEKDWVSLVAVHSDSWLLSVAFYFGARFGFGKNERKRLFQMIN 130

Query: 127 DIPTILETITRRYK------------SRKPRKTMARAMET------------KEEDNE-- 186
           ++PTI E ++   K              KP    +R  E+            KEE+ E  
Sbjct: 131 ELPTIFEVVSGNAKQSKDLSVNNNNSKSKPSGVKSRQSESLSKVAKMSSPPPKEEEEEED 190

Query: 187 -------------ICGSCEKKPNPNQKEFWICCDFCDTWFHGQCVKITPDQSTQIHNYKC 203
                        +CG+C    N    EFWICCD C+ WFHG+CVKITP ++  I +YKC
Sbjct: 191 ESEDESEDDEQGAVCGAC--GDNYGTDEFWICCDACEKWFHGKCVKITPAKAEHIKHYKC 250

The following BLAST results are available for this feature:

BLAST of MS023114 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022147579.1	2.2e-116	94.04	PHD finger protein ALFIN-LIKE 3-like [Momordica charantia]	[more]
XP_022962096.1	6.9e-46	46.64	PHD finger protein ALFIN-LIKE 4-like isoform X2 [Cucurbita moschata] >XP_0235461...	[more]
XP_022951576.1	2.0e-45	46.19	PHD finger protein ALFIN-LIKE 4-like isoform X2 [Cucurbita moschata]	[more]
KAG6585765.1	2.0e-45	46.19	PHD finger protein ALFIN-LIKE 5, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022997243.1	2.0e-45	46.19	PHD finger protein ALFIN-LIKE 4-like isoform X2 [Cucurbita maxima]	[more]

BLAST of MS023114 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M2B4	1.2e-45	44.00	PHD finger protein ALFIN-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=AL3 PE=1 SV=1	[more]
B8BJV8	6.3e-42	41.32	PHD finger protein ALFIN-LIKE 8 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_35...	[more]
Q2R837	6.3e-42	41.32	PHD finger protein ALFIN-LIKE 8 OS=Oryza sativa subsp. japonica OX=39947 GN=Os11...	[more]
B8B8C5	8.2e-42	39.76	PHD finger protein ALFIN-LIKE 9 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_26...	[more]
Q6YTY3	1.1e-41	39.61	PHD finger protein ALFIN-LIKE 9 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07...	[more]

BLAST of MS023114 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D1F2	1.0e-116	94.04	PHD finger protein ALFIN-LIKE 3-like OS=Momordica charantia OX=3673 GN=LOC111016...	[more]
A0A6J1HC47	3.3e-46	46.64	PHD finger protein ALFIN-LIKE 4-like isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1KDA9	9.7e-46	46.19	PHD finger protein ALFIN-LIKE 4-like isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1GHY6	9.7e-46	46.19	PHD finger protein ALFIN-LIKE 4-like isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1KTZ5	1.3e-45	46.19	PHD finger protein ALFIN-LIKE 4-like isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of MS023114 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G42790.1	8.7e-47	44.00	alfin-like 3	[more]
AT1G14510.1	1.7e-42	41.42	alfin-like 7	[more]
AT2G02470.2	2.2e-42	41.35	alfin-like 6	[more]
AT5G26210.1	2.2e-42	40.00	alfin-like 4	[more]
AT2G02470.1	6.4e-42	41.06	alfin-like 6	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001965	Zinc finger, PHD-type	SMART	SM00249	PHD_3	coord: 150..200 e-value: 1.6E-9 score: 47.6
IPR021998	Alfin, N-terminal	PFAM	PF12165	Alfin	coord: 7..125 e-value: 2.3E-34 score: 117.9
IPR019787	Zinc finger, PHD-finger	PFAM	PF00628	PHD	coord: 150..200 e-value: 5.4E-9 score: 35.8
IPR019787	Zinc finger, PHD-finger	PROSITE	PS50016	ZF_PHD_2	coord: 148..202 score: 8.9649
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 140..200 e-value: 3.1E-20 score: 73.3
IPR045104	Alfin	PANTHER	PTHR12321	CPG BINDING PROTEIN	coord: 5..202
IPR019786	Zinc finger, PHD-type, conserved site	PROSITE	PS01359	ZF_PHD_1	coord: 151..199
IPR011011	Zinc finger, FYVE/PHD-type	SUPERFAMILY	57903	FYVE/PHD zinc finger	coord: 130..202

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS023114.1	MS023114.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0042393	histone binding