MS023023 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTCACGGTTAATCTCGGAGTGCTTCATTATGTGTTGGACCATGTGTATGGTGCATTCGTGCACAGAACCAAGATCAGCCCGCCGTTTTTTTCGAGGGGATGGGGTGGTTCGAAGCTTGATTTGCTTGAGAAGATGATCAAACAGTTGTTCCCAGAAATGGCAGGGCAGAACTGGCCTCCCAGTTTGATTAGACCCATTTGGAGAACGGTTTGGGAGAATGAGACTGCCCGTTTGAGAGAGGGGGTTTTCAGAACCCCTTGTGATGAGCAGCTTCTTGCTGCATTGCCCCCAGAGAGTCATAATGCAAGGGTTGCGTTTCTGATGCCCAAATCAGTACCAACCCACAAGATGGCTTGTGTGGTTCATCTGGCAGGTATCTCGTCATATACTGTCCTACAGAACATCAATCTTATTTTTAGTCAATAATTTTAGGTGGGGAAGTAGGTCCAGGGGGGTACTTTTTGTCTGGAAAACTTGAAAATTTGATATCATTCTCTTTGAATGAGATATCATTTATAGACACAGTTTCGTTAGATATCGTATATGTTGAATCCCTCCCTTTCTGATTGAGTGCTTGTGTTTGATGTTCATGGAACATCAATCTCACTAACTAACTGATGAGGTTCTCAATTGTAAAGGTCAGATGATAACTCTGCACTGGTATTTTGCAGGGACTGGGGACCATGCATTTGAAAGGAGACTACGTCTTGGTGGGCCATTGTTGAAGGATAATATTGCAACCATGGTGCTTGAGAGGTATAACTTGTCCTGCTCTGTTAAGTGCAACTGGAGTGTCTCTAAGGGTGTTATGTAAAACTTTAAGTCATTAATTTTATGTTAACTATTTGAATACAGTCCTTTCTATGGTCAGAGACGACCCATGCTACAATACGGTGCAAAACTTTTGTGTGTTAGTGACTTGCTTTTGTTGGGAAGAGCGACGATTGAAGAGGCTCGCAGTCTTTTACATTGGTTAGACTCTGAGGCAGGATTTGGAAAGATGGGTGTTTGTGGGCTTAGCATGGGTATGCCTCAAGCTAGATGCCTTGTGATTATGATTATGAAGTTACTGGTTCTGTGCTTTAGTGGTTTAACTCTTTCTGAACATTTAAGTGAACTTAAATCTAATTTGCAAAGTTAAACTGTTTGCATCATTAATAGTTTGGAAGTCAAAAGGTACCTTCAGTCCTTATACTATCGTTGAAGCAAATATTTAGTCTTTAAGCTTCGGTTGTTTAAAACTTCTATTACACCTTCATTACAAATTTAATCTACTAAAGTTTAGGGACTTAATTGTTATCTCGATAAAAAATACAGTATTTTAGCTTAGTTTAAATTTAACTTAACACGGTAACACCCTCCAGACCCCCCCGAAAAAAAAAATCTAAGTTGGAACCATTTATGAAATTTAGGAGGAGTGCATGCTGCGATGGTTGGATCGCTACATCCTACACCAATTGCAACACTTCCTTTTCTTTCTCCACACTCTGCTGTTGTGGCATTCTGTGAGGGAATTTTAAAGCATGGAACTGCTTGGGAAGCACTGAGAGACGATCTTGCATTGCAGCAGTCTGCAATGACTCTCGAGGAGGTTAGAGAACGGATGCGGAATGTACTGTCTCTCACAGATGTCACACGCTTTCCAATCCCAAAAAATCCCAATGCTGTGATTCTTGTTGCTGCTACTGTAAGTTCTAGATCTTGGTCTACTACATTATGCACTTTAAATACATTTACGAAGTGTTTTGTCTAGGCAATTATCGTCATTCATTTATTGTATCCTTATAAACGCCCATATCTCTGAATGTTCTGATATGGAGTGTTATGCCAATCAAATATAATGACTCTAGGTTTCTCCTGCCTGGTCCATAATAGTTGGTAACTGTTCAAAATTTCTTTCAACTTTTTTTTTTTTTTTAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCATTATTTGGTAAAGGCTTACAGTTGTTGCATAGAGCTCCTGCATTTTATAGTCTCCTGTTATGAGTGAAGTTTGAATTGCTTGTATTTTCTGTAAGCTATAGTATAATCTCTTTTGATGGGACAATATTTTTATAATTATAATGTCGTCGTTAAAGCTTTCCATTTGGTCAAGAAAGCCTAGTTGATTGTGGGGTTGTTGGATTAGGCTTTCTTGAATCCTCGTTTTAGAGGGGATACCGAGATTTCCCTCTGTGAAGGAAGCTTTTGTCTACTCCATGGAGCACCTAGATTCAGAATAATAGGACTTTTTAGGGTAAGTGCATCTACCTCCAATTTTGAAGACTCATGTAAGAAGGGGTTACATGTAGACAAATCATATTTTTTTGACCTGGCCAATTAAATCCTTCTATTGGTGTATCTTTTCTCCCCTAAAAGTTTTTCTTCTTTTGGGCGAAAAAAAGCCACGAGGTGGGAAACAAGCATTTTGTAATTATGGTGTAACTCAAAATAGTTGCCAATTGGCAGTCTTTTTTGTAACTTGGCAAGTAGGAAATCTCATCTTCCCTTTTGTGCTTTTATTTTGATAATGAAAGTTTCATTTCTTATTTAAAAATAAAAAAAAGTTTTGTGAGAAGGGGAGAGAGACGTTATAAATGGAAGACTTGGGTGGGGAAGTACTCCTTTTTTTGTTGATTACCCATGAGTTGGTAGCCCTTTGGCCTTTATGCCCCTATACTTGGGGGTATGGCGCACTGTCCCCATACCCGTACATATGCAAGGAATTATTGCTTGGTTGGAGTTACATTCCATATGGCTTGAACCCATGACCTCGGTCGGGAAGTACTTGAACTCAGCTTTCTCTATCTTCGATAGTCATTTCTGCTTCCAAATGGATTCAGTAAGGAGACCTTCTCTCTCCTTTCGTATTTATTGTGGCTGTGGATGTCTCGTGTTGAGAGGCACGTATAGTGGCTTAGTCTAAGATTTCAAATTGAAATGTGATGTATTTATGGTTTGAAAATGATACTATTTTCTCTTGTTCAATAAGGGATTGAAGTCATTTATGATCTTAATAGGATTTGAAGTCATTTATGATCTTAATAGGATTTTCATGCCTACGACATTACTTGAATAGGATCTGTTTCTGTAGGTTGTACTACTGTGTACGTGTACTTGAGTTCTAAAATAGGATCATCATTGCTTCGTGGAGTTCACTTTTGGCCTCAATCAAGAGGGTCAAATGTTCCATAGTCAGTGTTAATTGCTAAGTTTGGAGGGCTCTTAGTTGATGGAAAGTGTATTTCTTTAGAAGTGGCAATTGCATTACTTTCTATATTCAAAGCTCCTTTCTTCACCTGTTCTAAATTAGAGAAAATTGTAAGGAAGCTTTTATGGGAGGGGTTGGGGGGAGGATGGTGCTTCTCGTAGTCTCAAAACCTTACAAGGATGCTTAAAATTGAGATTAGGAATTCAGCTTTAAATATTGAGGTTTTTTTGTCAAGACAATTCAGGGGCGACTTGTGTAGCGATATTTAGGATTACTTCAGCTTTAACCATAATGGGTGGCTCATTGGTTCAAAGGGGCTAGGGTTAATTAGGAGGGAATGAGTTCAAGTCCCTTGATGGCTAGCTACCTTAGGAATTAGTAATTCCTTTGTGTTTCCCGGTACTAAATGTTGTAGGGTCAAGCGGTCACCCCGTGAGATTAGTCGAGGTGCGCGTAAGCTGGTCCGGACACTCACGGATGTAAAAAAAAAAGATGGCTTTGGCATTTAGTCAAAGTTGTTGAGTAATGATGAAGGAAGTCATTTTGCAACTTCCTTTATGAAAACCAAAGGTTTATTTTGTAGACTGGGTTTTTGACTTTTTATGTTATATTTTGGTCGGACACGAGAGCTTTACCAGGGTAGACGGGGCTCGGACACAGGTCTTGAGTTTGGTTCATTTCAACACTTCATGTGGGCTTTTATTTTTGTTATTTGTTTGTCACTGTAAGCTTTTGTGATACTTGGTAATATTGCCTTTTGTTCTATTCTTCTGGTTGAAAGTTTGGTTTCTTATTAAAGAATTTTCAATGACATCAATAAAAACATAATGATGAAGACAACCAAGGAGACAGTCATTTTCAGAAGAAGCTTAAATGTCTTGTACTAGTTTTAATTGAACTCTCAAGTTGTAGTGTTGCTTTACGACACGGTTTGTTCACTGCTATTTTATTCCCTTCTACTTACTGCTTTCATAACTTAGTCGAATCCTTTCGGGTTTCAGGACGATGGCTACATCCCGAAACACTCCGTCCTTGAGCTCCAAAAAGCTTGGCCTGGTTCAGAAGTAAGATGGGTGACTGGTGGTCATGTGTCTTCCTTCATCCTACACAACGACGAGTTTCGCCGCGCAATCGTCGATGGGCTCAACAGACTTGAATGGAAGGAGTCGCCGTTA ATGGTCACGGTTAATCTCGGAGTGCTTCATTATGTGTTGGACCATGTGTATGGTGCATTCGTGCACAGAACCAAGATCAGCCCGCCGTTTTTTTCGAGGGGATGGGGTGGTTCGAAGCTTGATTTGCTTGAGAAGATGATCAAACAGTTGTTCCCAGAAATGGCAGGGCAGAACTGGCCTCCCAGTTTGATTAGACCCATTTGGAGAACGGTTTGGGAGAATGAGACTGCCCGTTTGAGAGAGGGGGTTTTCAGAACCCCTTGTGATGAGCAGCTTCTTGCTGCATTGCCCCCAGAGAGTCATAATGCAAGGGTTGCGTTTCTGATGCCCAAATCAGTACCAACCCACAAGATGGCTTGTGTGGTTCATCTGGCAGGGACTGGGGACCATGCATTTGAAAGGAGACTACGTCTTGGTGGGCCATTGTTGAAGGATAATATTGCAACCATGGTGCTTGAGAGTCCTTTCTATGGTCAGAGACGACCCATGCTACAATACGGTGCAAAACTTTTGTGTGTTAGTGACTTGCTTTTGTTGGGAAGAGCGACGATTGAAGAGGCTCGCAGTCTTTTACATTGGTTAGACTCTGAGGCAGGATTTGGAAAGATGGGTGTTTGTGGGCTTAGCATGGGAGGAGTGCATGCTGCGATGGTTGGATCGCTACATCCTACACCAATTGCAACACTTCCTTTTCTTTCTCCACACTCTGCTGTTGTGGCATTCTGTGAGGGAATTTTAAAGCATGGAACTGCTTGGGAAGCACTGAGAGACGATCTTGCATTGCAGCAGTCTGCAATGACTCTCGAGGAGGTTAGAGAACGGATGCGGAATGTACTGTCTCTCACAGATGTCACACGCTTTCCAATCCCAAAAAATCCCAATGCTGTGATTCTTGTTGCTGCTACTGACGATGGCTACATCCCGAAACACTCCGTCCTTGAGCTCCAAAAAGCTTGGCCTGGTTCAGAAGTAAGATGGGTGACTGGTGGTCATGTGTCTTCCTTCATCCTACACAACGACGAGTTTCGCCGCGCAATCGTCGATGGGCTCAACAGACTTGAATGGAAGGAGTCGCCGTTA ATGGTCACGGTTAATCTCGGAGTGCTTCATTATGTGTTGGACCATGTGTATGGTGCATTCGTGCACAGAACCAAGATCAGCCCGCCGTTTTTTTCGAGGGGATGGGGTGGTTCGAAGCTTGATTTGCTTGAGAAGATGATCAAACAGTTGTTCCCAGAAATGGCAGGGCAGAACTGGCCTCCCAGTTTGATTAGACCCATTTGGAGAACGGTTTGGGAGAATGAGACTGCCCGTTTGAGAGAGGGGGTTTTCAGAACCCCTTGTGATGAGCAGCTTCTTGCTGCATTGCCCCCAGAGAGTCATAATGCAAGGGTTGCGTTTCTGATGCCCAAATCAGTACCAACCCACAAGATGGCTTGTGTGGTTCATCTGGCAGGGACTGGGGACCATGCATTTGAAAGGAGACTACGTCTTGGTGGGCCATTGTTGAAGGATAATATTGCAACCATGGTGCTTGAGAGTCCTTTCTATGGTCAGAGACGACCCATGCTACAATACGGTGCAAAACTTTTGTGTGTTAGTGACTTGCTTTTGTTGGGAAGAGCGACGATTGAAGAGGCTCGCAGTCTTTTACATTGGTTAGACTCTGAGGCAGGATTTGGAAAGATGGGTGTTTGTGGGCTTAGCATGGGAGGAGTGCATGCTGCGATGGTTGGATCGCTACATCCTACACCAATTGCAACACTTCCTTTTCTTTCTCCACACTCTGCTGTTGTGGCATTCTGTGAGGGAATTTTAAAGCATGGAACTGCTTGGGAAGCACTGAGAGACGATCTTGCATTGCAGCAGTCTGCAATGACTCTCGAGGAGGTTAGAGAACGGATGCGGAATGTACTGTCTCTCACAGATGTCACACGCTTTCCAATCCCAAAAAATCCCAATGCTGTGATTCTTGTTGCTGCTACTGACGATGGCTACATCCCGAAACACTCCGTCCTTGAGCTCCAAAAAGCTTGGCCTGGTTCAGAAGTAAGATGGGTGACTGGTGGTCATGTGTCTTCCTTCATCCTACACAACGACGAGTTTCGCCGCGCAATCGTCGATGGGCTCAACAGACTTGAATGGAAGGAGTCGCCGTTA MVTVNLGVLHYVLDHVYGAFVHRTKISPPFFSRGWGGSKLDLLEKMIKQLFPEMAGQNWPPSLIRPIWRTVWENETARLREGVFRTPCDEQLLAALPPESHNARVAFLMPKSVPTHKMACVVHLAGTGDHAFERRLRLGGPLLKDNIATMVLESPFYGQRRPMLQYGAKLLCVSDLLLLGRATIEEARSLLHWLDSEAGFGKMGVCGLSMGGVHAAMVGSLHPTPIATLPFLSPHSAVVAFCEGILKHGTAWEALRDDLALQQSAMTLEEVRERMRNVLSLTDVTRFPIPKNPNAVILVAATDDGYIPKHSVLELQKAWPGSEVRWVTGGHVSSFILHNDEFRRAIVDGLNRLEWKESPL Homology
BLAST of MS023023 vs. NCBI nr
Match: XP_022154285.1 (protein ABHD18 [Momordica charantia]) HSP 1 Score: 745.7 bits (1924), Expect = 1.8e-211 Identity = 360/360 (100.00%), Postives = 360/360 (100.00%), Query Frame = 0
BLAST of MS023023 vs. NCBI nr
Match: XP_008443082.1 (PREDICTED: protein ABHD18 [Cucumis melo] >KAA0043714.1 protein ABHD18 [Cucumis melo var. makuwa] >TYK25420.1 protein ABHD18 [Cucumis melo var. makuwa]) HSP 1 Score: 722.6 bits (1864), Expect = 1.7e-204 Identity = 346/360 (96.11%), Postives = 357/360 (99.17%), Query Frame = 0
BLAST of MS023023 vs. NCBI nr
Match: XP_004136580.1 (protein ABHD18 [Cucumis sativus]) HSP 1 Score: 719.2 bits (1855), Expect = 1.8e-203 Identity = 343/360 (95.28%), Postives = 356/360 (98.89%), Query Frame = 0
BLAST of MS023023 vs. NCBI nr
Match: XP_038906354.1 (protein ABHD18 [Benincasa hispida]) HSP 1 Score: 717.6 bits (1851), Expect = 5.3e-203 Identity = 342/360 (95.00%), Postives = 354/360 (98.33%), Query Frame = 0
BLAST of MS023023 vs. NCBI nr
Match: XP_022931884.1 (protein ABHD18 [Cucurbita moschata] >XP_022971218.1 protein ABHD18 [Cucurbita maxima] >KAG6596225.1 Protein ABHD18, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 716.8 bits (1849), Expect = 9.1e-203 Identity = 344/360 (95.56%), Postives = 354/360 (98.33%), Query Frame = 0
BLAST of MS023023 vs. ExPASy Swiss-Prot
Match: Q8C1A9 (Protein ABHD18 OS=Mus musculus OX=10090 GN=Abhd18 PE=2 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 1.8e-36 Identity = 119/455 (26.15%), Postives = 188/455 (41.32%), Query Frame = 0
BLAST of MS023023 vs. ExPASy Swiss-Prot
Match: Q0P651 (Protein ABHD18 OS=Homo sapiens OX=9606 GN=ABHD18 PE=2 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 2.4e-36 Identity = 112/412 (27.18%), Postives = 185/412 (44.90%), Query Frame = 0
BLAST of MS023023 vs. ExPASy Swiss-Prot
Match: Q4V7A8 (Protein ABHD18 OS=Rattus norvegicus OX=10116 GN=Abhd18 PE=2 SV=2) HSP 1 Score: 150.2 bits (378), Expect = 4.4e-35 Identity = 118/455 (25.93%), Postives = 188/455 (41.32%), Query Frame = 0
BLAST of MS023023 vs. ExPASy Swiss-Prot
Match: P9WL66 (Uncharacterized protein MT2702 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=MT2702 PE=2 SV=1) HSP 1 Score: 46.2 bits (108), Expect = 9.0e-04 Identity = 58/202 (28.71%), Postives = 83/202 (41.09%), Query Frame = 0
BLAST of MS023023 vs. ExPASy Swiss-Prot
Match: P9WL67 (Uncharacterized protein Rv2627c OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=Rv2627c PE=1 SV=1) HSP 1 Score: 46.2 bits (108), Expect = 9.0e-04 Identity = 58/202 (28.71%), Postives = 83/202 (41.09%), Query Frame = 0
BLAST of MS023023 vs. ExPASy TrEMBL
Match: A0A6J1DJ72 (protein ABHD18 OS=Momordica charantia OX=3673 GN=LOC111021576 PE=4 SV=1) HSP 1 Score: 745.7 bits (1924), Expect = 8.8e-212 Identity = 360/360 (100.00%), Postives = 360/360 (100.00%), Query Frame = 0
BLAST of MS023023 vs. ExPASy TrEMBL
Match: A0A5D3DQ75 (Protein ABHD18 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G005630 PE=4 SV=1) HSP 1 Score: 722.6 bits (1864), Expect = 8.0e-205 Identity = 346/360 (96.11%), Postives = 357/360 (99.17%), Query Frame = 0
BLAST of MS023023 vs. ExPASy TrEMBL
Match: A0A1S3B7Y7 (protein ABHD18 OS=Cucumis melo OX=3656 GN=LOC103486787 PE=4 SV=1) HSP 1 Score: 722.6 bits (1864), Expect = 8.0e-205 Identity = 346/360 (96.11%), Postives = 357/360 (99.17%), Query Frame = 0
BLAST of MS023023 vs. ExPASy TrEMBL
Match: A0A0A0LEI2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G810490 PE=4 SV=1) HSP 1 Score: 719.2 bits (1855), Expect = 8.8e-204 Identity = 343/360 (95.28%), Postives = 356/360 (98.89%), Query Frame = 0
BLAST of MS023023 vs. ExPASy TrEMBL
Match: A0A6J1I678 (protein ABHD18 OS=Cucurbita maxima OX=3661 GN=LOC111470008 PE=4 SV=1) HSP 1 Score: 716.8 bits (1849), Expect = 4.4e-203 Identity = 344/360 (95.56%), Postives = 354/360 (98.33%), Query Frame = 0
BLAST of MS023023 vs. TAIR 10
Match: AT3G12150.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2048 (InterPro:IPR019149); Has 421 Blast hits to 334 proteins in 155 species: Archae - 2; Bacteria - 147; Metazoa - 215; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). ) HSP 1 Score: 639.4 bits (1648), Expect = 1.7e-183 Identity = 297/359 (82.73%), Postives = 335/359 (93.31%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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