MS022704 (gene) Bitter gourd (TR) v1

Overview


Name	MS022704
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Ribonuclease H-like superfamily protein
Location	scaffold41: 235875 .. 236970 (-)
RNA-Seq Expression	MS022704
Synteny	MS022704

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAGCTATCCCTAGCTACTCGATGTCGTGTTTCAAGCTCTCAAAAGGTCTCATTGCTAAATGTAACAAGCTTATGACAAGGTTTTGGTGGGGTGGCAGGGAGGAGAAGCGGAAAATTCATTGGTGTAAATGGGTGAACTTATGTGGCCATAAAAGAAAAGGTGGGATGGGCTTTCGAGACCTTGAGTGTTTTAATAAAGTGTTATTGGTGAAGCAAGGTTGGCGGCTTTTGACGAATCCTGATTCTTTTGTGGCTCGTGTTCTTAAAAGCAAATATTTCAGGTACTCATCCTTTCTTGAAGTTGAAAAGAAAAAAAAAATGCTTTTTTTTGTTTGGAATAGCTAGCATTCTATGGGGGAGGGATTTGCTTACAAAAGGAATTCGGTGGAGAATTGGAGATGAAAATAGCGTGAGTATTGGGAGGCACAACTGGATTCCTTCTAATTCTACGTTGAGGCCAATCTATCCTTATAGAGGGGAGCCTGAGAGGCTGGTTTCAACCTTGCTAAACAGACAGGACGACTGGAATGAAAATCTGATAAGTAATTTATTTCACCCTACTGATGCGAGGAATATTTTATCTATTCCCCTAGCAACCATAAAAGGTAAAGATATCCCAATGTGGCATTATAACAAAGATGGTAACTACTCTGTGAAAAGTGGTTGTCATGTTTGTTTCCCTCAAAAGAACTGGCTGGATCAATCATGTAGTGAAAAGATGGAGAAATTGTGGTCTTATTGCTCGCACCTACAAGTCCCATCTAAAATTAAGATGTTTGGGTGGAAAGCCTTTAAGGATTACATTCCCTCAGGAGTAAATTTGGGAAGAAGAGGATTTGTAGGAGTTGAAATATGTGATCGGTCTGACCATTATGGAGAAGACTCTTTACATGCTTTGTGGTTGAGCAGAAATAGCAAGAACCTGTGGAAAGAAACACCATTTTATCACCTTCAATGGCCAACGACGATTACTTCCCTTAGTGATCTGATGTGGTGGTTCAAGGATAAGCTGAACGAACGAAATTTCAACTGTTTCCTAATTCTGTTATGGGCTATTTGGAACCAACGAAATAAGGTAATTTTTATGGGGAAAGAG

mRNA sequence

CAAGCTATCCCTAGCTACTCGATGTCGTGTTTCAAGCTCTCAAAAGGTCTCATTGCTAAATGTAACAAGCTTATGACAAGGTTTTGGTGGGGTGGCAGGGAGGAGAAGCGGAAAATTCATTGGTGTAAATGGGTGAACTTATGTGGCCATAAAAGAAAAGGTGGGATGGGCTTTCGAGACCTTGAGTGTTTTAATAAAGTGTTATTGGTGAAGCAAGGTTGGCGGCTTTTGACGAATCCTGATTCTTTTGTGGCTCGTGTTCTTAAAAGCAAATATTTCAGGTACTCATCCTTTCTTGAAGTTGAAAAGAAAAAAAAAATGCTTTTTTTTGTTTGGGCTAGCATTCTATGGGGGAGGGATTTGCTTACAAAAGGAATTCGGTGGAGAATTGGAGATGAAAATAGCGTGAGTATTGGGAGGCACAACTGGATTCCTTCTAATTCTACGTTGAGGCCAATCTATCCTTATAGAGGGGAGCCTGAGAGGCTGGTTTCAACCTTGCTAAACAGACAGGACGACTGGAATGAAAATCTGATAAGTAATTTATTTCACCCTACTGATGCGAGGAATATTTTATCTATTCCCCTAGCAACCATAAAAGGTAAAGATATCCCAATGTGGCATTATAACAAAGATGGTAACTACTCTGTGAAAAGTGGTTGTCATGTTTGTTTCCCTCAAAAGAACTGGCTGGATCAATCATGTAGTGAAAAGATGGAGAAATTGTGGTCTTATTGCTCGCACCTACAAGTCCCATCTAAAATTAAGATGTTTGGGTGGAAAGCCTTTAAGGATTACATTCCCTCAGGAGTAAATTTGGGAAGAAGAGGATTTGTAGGAGTTGAAATATGTGATCGGTCTGACCATTATGGAGAAGACTCTTTACATGCTTTGTGGTTGAGCAGAAATAGCAAGAACCTGTGGAAAGAAACACCATTTTATCACCTTCAATGGCCAACGACGATTACTTCCCTTAGTGATCTGATGTGGTGGTTCAAGGATAAGCTGAACGAACGAAATTTCAACTGTTTCCTAATTCTGTTATGGGCTATTTGGAACCAACGAAATAAGGTAATTTTTATGGGGAAAGAG

Coding sequence (CDS)

CAAGCTATCCCTAGCTACTCGATGTCGTGTTTCAAGCTCTCAAAAGGTCTCATTGCTAAATGTAACAAGCTTATGACAAGGTTTTGGTGGGGTGGCAGGGAGGAGAAGCGGAAAATTCATTGGTGTAAATGGGTGAACTTATGTGGCCATAAAAGAAAAGGTGGGATGGGCTTTCGAGACCTTGAGTGTTTTAATAAAGTGTTATTGGTGAAGCAAGGTTGGCGGCTTTTGACGAATCCTGATTCTTTTGTGGCTCGTGTTCTTAAAAGCAAATATTTCAGGTACTCATCCTTTCTTGAAGTTGAAAAGAAAAAAAAAATGCTTTTTTTTGTTTGGGCTAGCATTCTATGGGGGAGGGATTTGCTTACAAAAGGAATTCGGTGGAGAATTGGAGATGAAAATAGCGTGAGTATTGGGAGGCACAACTGGATTCCTTCTAATTCTACGTTGAGGCCAATCTATCCTTATAGAGGGGAGCCTGAGAGGCTGGTTTCAACCTTGCTAAACAGACAGGACGACTGGAATGAAAATCTGATAAGTAATTTATTTCACCCTACTGATGCGAGGAATATTTTATCTATTCCCCTAGCAACCATAAAAGGTAAAGATATCCCAATGTGGCATTATAACAAAGATGGTAACTACTCTGTGAAAAGTGGTTGTCATGTTTGTTTCCCTCAAAAGAACTGGCTGGATCAATCATGTAGTGAAAAGATGGAGAAATTGTGGTCTTATTGCTCGCACCTACAAGTCCCATCTAAAATTAAGATGTTTGGGTGGAAAGCCTTTAAGGATTACATTCCCTCAGGAGTAAATTTGGGAAGAAGAGGATTTGTAGGAGTTGAAATATGTGATCGGTCTGACCATTATGGAGAAGACTCTTTACATGCTTTGTGGTTGAGCAGAAATAGCAAGAACCTGTGGAAAGAAACACCATTTTATCACCTTCAATGGCCAACGACGATTACTTCCCTTAGTGATCTGATGTGGTGGTTCAAGGATAAGCTGAACGAACGAAATTTCAACTGTTTCCTAATTCTGTTATGGGCTATTTGGAACCAACGAAATAAGGTAATTTTTATGGGGAAAGAG

Protein sequence

QAIPSYSMSCFKLSKGLIAKCNKLMTRFWWGGREEKRKIHWCKWVNLCGHKRKGGMGFRDLECFNKVLLVKQGWRLLTNPDSFVARVLKSKYFRYSSFLEVEKKKKMLFFVWASILWGRDLLTKGIRWRIGDENSVSIGRHNWIPSNSTLRPIYPYRGEPERLVSTLLNRQDDWNENLISNLFHPTDARNILSIPLATIKGKDIPMWHYNKDGNYSVKSGCHVCFPQKNWLDQSCSEKMEKLWSYCSHLQVPSKIKMFGWKAFKDYIPSGVNLGRRGFVGVEICDRSDHYGEDSLHALWLSRNSKNLWKETPFYHLQWPTTITSLSDLMWWFKDKLNERNFNCFLILLWAIWNQRNKVIFMGKE

Homology

[Close]

BLAST of MS022704 vs. NCBI nr
Match: XP_024950112.1 (uncharacterized protein LOC112496847 [Citrus sinensis])

HSP 1 Score: 287.3 bits (734), Expect = 1.8e-73
Identity = 140/364 (38.46%), Postives = 203/364 (55.77%), Query Frame = 0


Query: 1    QAIPSYSMSCFKLSKGLIAKCNKLMTRFWWGGREEKRKIHWCKWVNLCGHKRKGGMGFRD 60
            QAIP+Y+MS FKL +G      + + +FWWG + +KR IHW KW  L   K +GG+GFR+
Sbjct: 833  QAIPAYAMSVFKLPRGFCDDIQRAIAKFWWGSKGDKRGIHWRKWEKLSQAKIRGGLGFRE 892

Query: 61   LECFNKVLLVKQGWRLLTNPDSFVARVLKSKYFRYSSFLEVEKKKKMLFFVWASILWGRD 120
              CFN+ L+ KQ WRLL  P+S V+RVL+++YFR SSFL   K      ++W SI+WGR 
Sbjct: 893  FSCFNQALVAKQAWRLLQYPNSLVSRVLQARYFRNSSFL-CAKAGANASYIWRSIMWGRQ 952

Query: 121  LLTKGIRWRIGDENSVSIGRHNWIPSNSTLRPIYPYRGEPERLVSTLLNRQDDWNENLIS 180
            ++ KG+RWRIG+   ++I   NW+P   T RPI+P       +V+ L+   + W+E  + 
Sbjct: 953  VIKKGMRWRIGNGKKIAIFSDNWLPRPETFRPIFPLSLPVSSVVADLIKADNQWDEIKLR 1012

Query: 181  NLFHPTDARNILSIPLATIKGKDIPMWHYNKDGNYSVKSGCHVCFPQKNWLDQSCSEKME 240
              F   D   IL IPL   K +D  +WHY+K GNYSVKSG  +    K     SC+E   
Sbjct: 1013 QHFLDVDTAEILKIPLPAEKAEDEVLWHYDKRGNYSVKSGYQLALRSKFPDSTSCTEASH 1072

Query: 241  KLWSYCSHLQVPSKIKMFGWKAFKDYIPSGVNLGRRGFVGVEICDRSDHYGEDSLHALWL 300
            K WS    L++P K+K+F W+A  + +PS  NL +R  V    C R     E   HAL  
Sbjct: 1073 KYWSALWTLELPEKLKIFMWRASNNLLPSAENLWKRKVVEEPTCKRCKLSVETISHALLE 1132

Query: 301  SRNSKNLWKETPFYHLQWPTTITSLSDLMWWFKDKLNERNFNCFLILLWAIWNQRNKVIF 360
             + ++ +W ++PF   +       +   +     +L + +    + L W+ W  RNK IF
Sbjct: 1133 CKAARKIWLQSPFSAPRLEANSQDIFSTLQNMAKELRKSDLELMVALCWSAWYARNKCIF 1192

Query: 361  MGKE 365
             G+E
Sbjct: 1193 DGRE 1195

[Close]

BLAST of MS022704 vs. NCBI nr
Match: VVA32947.1 (PREDICTED: retrotransposon [Prunus dulcis])

HSP 1 Score: 280.8 bits (717), Expect = 1.7e-71
Identity = 137/366 (37.43%), Postives = 202/366 (55.19%), Query Frame = 0


Query: 1    QAIPSYSMSCFKLSKGLIAKCNKLMTRFWWGGREEKRKIHWCKWVNLCGHKRKGGMGFRD 60
            QAIP+YSMSCF++ KGL  + N +M RFWW   ++KR IHW KW  LC  K  GG+GFRD
Sbjct: 730  QAIPTYSMSCFRIPKGLCKELNGIMARFWWAKAKDKRGIHWVKWELLCKSKFAGGLGFRD 789

Query: 61   LECFNKVLLVKQGWRLLTNPDSFVARVLKSKYFRYSSFLEVEKKKKMLFFVWASILWGRD 120
            LE FN+ LL KQ WR+L  P+S VAR+ +++Y     FLE E       F+W S+ WG++
Sbjct: 790  LEAFNQALLAKQCWRILRTPESLVARIFRARYHPSVPFLEAEVGTNP-SFIWRSLQWGKE 849

Query: 121  LLTKGIRWRIGDENSVSIGRHNWIPSNSTLRPIYPYRGEPERLVSTLLNRQDDWNENLIS 180
            LL KG+RWR+G+  S+ +    W+P+ S  + + P +     LV  L      WN  L+ 
Sbjct: 850  LLNKGLRWRVGNGVSIQVYTDKWLPAPSFFKIMSPPQLPLSTLVCDLFTSSGQWNVPLLK 909

Query: 181  NLFHPTDARNILSIPLATIKGKDIPMWHYNKDGNYSVKSGCHVCFPQKNWLDQSCSEKME 240
            ++F   +    L IPLA++ G D  +WHY ++G YSVKSG  +   +K+ +    S +++
Sbjct: 910  DIFWDQEVDAKLQIPLASLAGHDCLIWHYERNGMYSVKSGYRLACLEKDKMSGEPSVRVD 969

Query: 241  ---KLWSYCSHLQVPSKIKMFGWKAFKDYIPSGVNLGRRGFVGVEICDRSDHYGEDSLHA 300
               K W     L++P+KIK F W+   D++P G  L  R      IC       E  LHA
Sbjct: 970  LNSKFWKKIWALKIPNKIKFFLWRCAWDFLPCGQILFNRKIAPTPICPNCHRKAESVLHA 1029

Query: 301  LWLSRNSKNLWKETPFYHLQWPTTITSLSDLMWWFKDKLNERNFNCFLILLWAIWNQRNK 360
            +WL   +K +W+ + + ++     + S  +L    +   +      F  L W +WN+RN 
Sbjct: 1030 VWLCETAKEVWRNSAWGNVCEEWRVNSFRELWHALQLSSSGEEQGLFAYLCWGLWNRRNS 1089

Query: 361  VIFMGK 364
             IF GK
Sbjct: 1090 FIFEGK 1094

[Close]

BLAST of MS022704 vs. NCBI nr
Match: ONI01138.1 (hypothetical protein PRUPE_6G123900 [Prunus persica])

HSP 1 Score: 280.8 bits (717), Expect = 1.7e-71
Identity = 137/366 (37.43%), Postives = 202/366 (55.19%), Query Frame = 0


Query: 1   QAIPSYSMSCFKLSKGLIAKCNKLMTRFWWGGREEKRKIHWCKWVNLCGHKRKGGMGFRD 60
           QAIP+YSMSCF++ KGL  + N +M RFWW   ++KR IHW KW  LC  K  GG+GFRD
Sbjct: 464 QAIPTYSMSCFRIPKGLCKELNGIMARFWWAKAKDKRGIHWVKWELLCKSKFAGGLGFRD 523

Query: 61  LECFNKVLLVKQGWRLLTNPDSFVARVLKSKYFRYSSFLEVEKKKKMLFFVWASILWGRD 120
           LE FN+ LL KQ WR+L  P+S VAR+ +++Y     FLE E       F+W S+ WG++
Sbjct: 524 LEAFNQALLAKQCWRILRTPESLVARIFRARYHPSVPFLEAEVGTNP-SFIWRSLQWGKE 583

Query: 121 LLTKGIRWRIGDENSVSIGRHNWIPSNSTLRPIYPYRGEPERLVSTLLNRQDDWNENLIS 180
           LL KG+RWR+G   S+ +    W+P+ S  + + P +      V  L      WN  L+ 
Sbjct: 584 LLNKGLRWRVGSGVSIQVYTDKWLPAPSCFKIMSPPQLPLSTRVCDLFTSSGQWNVPLLK 643

Query: 181 NLFHPTDARNILSIPLATIKGKDIPMWHYNKDGNYSVKSGCHVCFPQKNWLDQSCSEKME 240
           ++F   +   IL IPLA++ G D  +WHY ++G YSVKSG  +   +K+ +    S +++
Sbjct: 644 DIFWDQEVDAILQIPLASLAGHDCLIWHYERNGMYSVKSGYRLAGLEKDKMSGEPSARVD 703

Query: 241 ---KLWSYCSHLQVPSKIKMFGWKAFKDYIPSGVNLGRRGFVGVEICDRSDHYGEDSLHA 300
              K W     L++P+KIK F W+   D++P G  L  R      IC +     E  LHA
Sbjct: 704 LNSKFWKKIWALKIPNKIKFFLWRCAWDFLPCGQILFNRKIAPTPICPKCHRKAESVLHA 763

Query: 301 LWLSRNSKNLWKETPFYHLQWPTTITSLSDLMWWFKDKLNERNFNCFLILLWAIWNQRNK 360
           +WL   +K +W+ + + ++     + S  +L    +   +      F  L W +WN+RN 
Sbjct: 764 VWLCEAAKEVWRNSAWGNVCEVWRVNSFRELWHALQLSSSGEEQGLFAYLCWGLWNRRNS 823

Query: 361 VIFMGK 364
            IF GK
Sbjct: 824 FIFEGK 828

[Close]

BLAST of MS022704 vs. NCBI nr
Match: XP_015382226.1 (uncharacterized protein LOC107175329, partial [Citrus sinensis])

HSP 1 Score: 280.4 bits (716), Expect = 2.2e-71
Identity = 138/363 (38.02%), Postives = 196/363 (53.99%), Query Frame = 0


Query: 1   QAIPSYSMSCFKLSKGLIAKCNKLMTRFWWGGREEKRKIHWCKWVNLCGHKRKGGMGFRD 60
           QA+P+Y+MS FKL   +     K + RFWWG   ++R IHW KW  LC  K +GGMGFRD
Sbjct: 408 QAVPAYAMSVFKLPASICEDIQKAIARFWWGSSSDRRGIHWAKWEKLCQAKMRGGMGFRD 467

Query: 61  LECFNKVLLVKQGWRLLTNPDSFVARVLKSKYFRYSSFLEVEKKKKMLFFVWASILWGRD 120
             CFN+ L+ KQGWR++ +P+S +ARVLK+KYF  SSF+E  K      FVW SILWGR 
Sbjct: 468 FSCFNQALIAKQGWRIIQHPESLMARVLKAKYFNQSSFMEA-KLGSRPSFVWRSILWGRQ 527

Query: 121 LLTKGIRWRIGDENSVSIGRHNWIPSNSTLRPIYPYRGEPERLVSTLLNRQDDWNENLIS 180
           ++ KG+RW+IG  N V I + NW+P     +P  P   + + +V+ L++   +W + +  
Sbjct: 528 IMQKGLRWKIGSGNQVCIYKSNWLPRLEAFKPFSPPTLDIQAVVADLIDENQNWKKEICY 587

Query: 181 NLFHPTDARNILSIPLATIKGKDIPMWHYNKDGNYSVKSGCHVCFPQKNWLDQSCSEKME 240
             F   DA  I+ I L      D  +WHY+K G YSVKSG  +    K       S+   
Sbjct: 588 QHFMKEDAAMIVRIQLPNTPKPDQYLWHYDKYGKYSVKSGYQIALKLKCPDSPCSSDSSL 647

Query: 241 KLWSYCSHLQVPSKIKMFGWKAFKDYIPSGVNLGRRGFVGVEICDRSDHYGEDSLHALWL 300
             W+     ++P KIK+F W+A K+ +P+  NL RR  VG  IC R     ED +HAL  
Sbjct: 648 SQWNVIWAAELPEKIKIFMWRAVKNLLPTTSNLWRRKIVGSPICRRCGVKNEDVIHALLD 707

Query: 301 SRNSKNLWKETPFYHLQWPTTITSLSDLMWWFKDKLNERNFNCFLILLWAIWNQRNKVIF 360
            + +K +W+               L  ++   + K  ++     ++L W IW  RN  IF
Sbjct: 708 CKVAKKVWRNAGCAEEIEKLVQQDLMAVLVEIQRKKGKKELELIVVLCWTIWYSRNLFIF 767

Query: 361 MGK 364
             K
Sbjct: 768 ENK 769

[Close]

BLAST of MS022704 vs. NCBI nr
Match: XP_022150918.1 (uncharacterized protein LOC111018954 [Momordica charantia])

HSP 1 Score: 280.0 bits (715), Expect = 2.9e-71
Identity = 147/364 (40.38%), Postives = 214/364 (58.79%), Query Frame = 0


Query: 1   QAIPSYSMSCFKLSKGLIAKCNKLMTRFWWGGREEKRKIHWCKWVNLCGHKRKGGMGFRD 60
           QAIP Y+MSCF+L K LI + + +  RFWWG  +E +KIHW  W +L   K +GGMGFRD
Sbjct: 591 QAIPCYTMSCFRLPKRLIREFHHITARFWWGSSKEDKKIHWVAWNSLYLPKCEGGMGFRD 650

Query: 61  LECFNKVLLVKQGWRLLTNPDSFVARVLKSKYFRYSSFLEVEKKKKMLFFVWASILWGRD 120
           LE FNK LL KQ WR+L +P+S ++RVLK +YF+  SF+E  K      ++W SILWGRD
Sbjct: 651 LELFNKALLAKQCWRILNHPNSMLSRVLKGRYFKDCSFMEA-KISGNPSYIWRSILWGRD 710

Query: 121 LLTKGIRWRIGDENSVSIGRHNWIPSNSTLRPIYPYRGEPERLVSTLLNRQD-DWNENLI 180
           LL KG+RWRIG+ +SV I   NW+P+  TL+ +   R      VS+L++ ++  W  +++
Sbjct: 711 LLKKGLRWRIGNGDSVFIYGDNWVPNQPTLKILSSPRLPLVSRVSSLVDHEEGGWQGDVV 770

Query: 181 SNLFHPTDARNILSIPLATIKGKDIPMWHYNKDGNYSVKSGCHVCF---PQKNWLDQSCS 240
            + F P +A+ ILSIP+     +D  +W+Y K G YSV+SG  V     P       S S
Sbjct: 771 RDEFTPDEAKGILSIPIGRGAEEDRLIWNYEKTGVYSVRSGYKVALLNNPCVQAPSSSSS 830

Query: 241 EKMEKLWSYCSHLQVPSKIKMFGWKAFKDYIPSGVNLGRRGFVGVEICDRSDHYGEDSLH 300
           E++   W+    + +P+KIK+F W+   D +P+G NL +RG      C      GEDS+H
Sbjct: 831 EEVRCWWNGFWKMHIPNKIKVFLWRLCLDRLPTGCNLSKRGVEITNCCYFCGRNGEDSIH 890

Query: 301 ALWLSRNSKNLWKETPFYHLQWPTTITSLSDLMWWFKDKLNERNFNCFLILLWAIWNQRN 360
             W+ + ++ LW  + F  L  P  I   S       + L++ +F    +++W +WNQRN
Sbjct: 891 LFWICKFAEALWINSKFGKLS-PFLILRES------HESLSKADFEELCVVIWGLWNQRN 946

[Close]

BLAST of MS022704 vs. ExPASy Swiss-Prot
Match: P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 1.3e-29
Identity = 65/153 (42.48%), Postives = 91/153 (59.48%), Query Frame = 0


Query: 2   AIPSYSMSCFKLSKGLIAKCNKLMTRFWWGGREEKRKIHWCKWVNLCGHKR-KGGMGFRD 61
           A+P Y+MSCF+LSK L  K    MT FWW   E KRKI W  W  LC  K   GG+GFRD
Sbjct: 2   ALPVYAMSCFRLSKLLCKKLTSAMTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFRD 61

Query: 62  LECFNKVLLVKQGWRLLTNPDSFVARVLKSKYFRYSSFLEVEKKKKMLFFVWASILWGRD 121
           L  FN+ LL KQ +R++  P + ++R+L+S+YF +SS +E     +   + W SI+ GR+
Sbjct: 62  LGWFNQALLAKQSFRIIHQPHTLLSRLLRSRYFPHSSMMECSVGTRP-SYAWRSIIHGRE 121

Query: 122 LLTKGIRWRIGDENSVSIGRHNWIPSNSTLRPI 154
           LL++G+   IGD     +    WI   + L P+
Sbjct: 122 LLSRGLLRTIGDGIHTKVWLDRWIMDETPLPPL 153

[Close]

BLAST of MS022704 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 3.0e-23
Identity = 92/377 (24.40%), Postives = 151/377 (40.05%), Query Frame = 0


Query: 2   AIPSYSMSCFKLSKGLIAKCNKLMTRFWWGGREEKRKIHWCKWVNLCGHKRKGGMGFRDL 61
           ++P +SMS   L + ++ + ++L   F WG   EK+K H  KW  +C  K++GG+G R  
Sbjct: 47  SMPVHSMSTILLPQSILNRLDQLSRTFLWGSTAEKKKQHLVKWSKVCSPKKEGGLGVRAA 106

Query: 62  ECFNKVLLVKQGWRLLTNPDSFVARVLKSKY----FRYSSFLEVEKKKKMLFFVWASILW 121
           +  N+ L+ K GWRLL   +S    VL+ KY     R S +L     K      W SI  
Sbjct: 107 KSMNRALISKVGWRLLQEKNSLWTLVLQKKYHVGEIRDSRWL---IPKGSWSSTWRSIAI 166

Query: 122 G-RDLLTKGIRWRIGDENSVSIGRHNWIPSNSTLRPIYPYRGEPERLVSTLLNRQ----- 181
           G RD+++ G+ W  GD   +      W+     L       GE      T++ +      
Sbjct: 167 GLRDVVSHGVGWIPGDGQQIRFWTDRWVSGKPLLE---LDNGERPTDCDTVVAKDLWIPG 226

Query: 182 DDWNENLISNLFHPTDARNILSIPLATIKG-KDIPMWHYNKDGNYSVKSGCHVCFPQKNW 241
             W+   I           + ++ L  + G +D   W +++DG +SV+S   +       
Sbjct: 227 RGWDFAKIDPYTTNNTRLELRAVVLDLVTGARDRLSWKFSQDGQFSVRSAYEML-----T 286

Query: 242 LDQSCSEKMEKLWSYCSHLQVPSKIKMFGWKAFKDYIPSGVNLGRRGFVGVEICDRSDHY 301
           +D+     M   ++    ++VP ++K F W      + +     RR      +C      
Sbjct: 287 VDEVPRPNMASFFNCLWKVRVPERVKTFLWLVGNQAVMTEEERHRRHLSASNVCQVCKGG 346

Query: 302 GEDSLHALWLSRNSKNLWKETPFYHLQWPTTITSLSDLMWWFKDKLNERN-------FNC 361
            E  LH L        +W        Q      SL +   W  D L +R+          
Sbjct: 347 VESMLHVLRDCPAQLGIWVRVVPQRRQQGFFSKSLFE---WLYDNLGDRSGCEDIPWSTI 406

[Close]

BLAST of MS022704 vs. ExPASy TrEMBL
Match: A0A803QH07 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 2.1e-72
Identity = 134/363 (36.91%), Postives = 203/363 (55.92%), Query Frame = 0


Query: 1    QAIPSYSMSCFKLSKGLIAKCNKLMTRFWWGGREEKRKIHWCKWVNLCGHKRKGGMGFRD 60
            Q+IP+Y+MSCFKL+K    +   +M  FWWG  +   KIHW +W +LC  K +GGMGFR 
Sbjct: 1270 QSIPTYAMSCFKLTKKFCNQLESMMANFWWGTNQNGTKIHWKRWKSLCKSKHEGGMGFRS 1329

Query: 61   LECFNKVLLVKQGWRLLTNPDSFVARVLKSKYFRYSSFLEVEKKKKMLFFVWASILWGRD 120
               FN+ LL KQ WR+   PDS ++R+LK +YF  +SFL+         + W SI WGR+
Sbjct: 1330 FVHFNQALLAKQAWRIFDMPDSLLSRLLKHRYFSTTSFLDASIGHSP-SYTWQSICWGRE 1389

Query: 121  LLTKGIRWRIGDENSVSIGRHNWIPSNSTLRPIYPYRGEPERLVSTLLNRQDDWNENLIS 180
            LL KG+R+++G+ + +   +  WIPS+ + RP+  Y G P+  VS L+N   +WN  L++
Sbjct: 1390 LLIKGLRFKVGNGSHIDCSKDPWIPSHDSFRPV-SYCGPPQLPVSALINDNREWNSTLLN 1449

Query: 181  NLFHPTDARNILSIPLATIKGKDIPMWHYNKDGNYSVKSGCHVCFPQKNWLDQSCSEKME 240
            + F P D   ILSIPL+    +D  +WH++  G+Y+VKSG H+    ++ L  S S+   
Sbjct: 1450 DFFQPIDVEKILSIPLSYFATQDRLIWHHSTSGSYNVKSGFHLATHLEDQLQSSSSDANR 1509

Query: 241  KLWSYCSHLQVPSKIKMFGWKAFKDYIPSGVNLGRRGFVGVEICDRSDHYGEDSLHALWL 300
              W +  +L +P KI++F WK  +  +P    L +R  +    C   +   E   HAL+ 
Sbjct: 1510 DWWKFFWNLSLPPKIRIFAWKVIQHILPVAAALFKRKVIDSAACSLCNSSWESIGHALFG 1569

Query: 301  SRNSKNLWKETPFYHLQWPTTITSLSDLMWWFKDKLNERNFNCFLILLWAIWNQRNKVIF 360
              ++KN+WKE+ F             D + +      + +F  F+ LLW IW  RN+V  
Sbjct: 1570 CSHAKNIWKESKFIIDFNKAQSMFNGDYLHYLSAVYTQEDFELFICLLWGIWTDRNRVFH 1629

Query: 361  MGK 364
             GK
Sbjct: 1630 GGK 1630

[Close]

BLAST of MS022704 vs. ExPASy TrEMBL
Match: A0A5E4FZN9 (PREDICTED: retrotransposon OS=Prunus dulcis OX=3755 GN=ALMOND_2B007697 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 8.1e-72
Identity = 137/366 (37.43%), Postives = 202/366 (55.19%), Query Frame = 0


Query: 1    QAIPSYSMSCFKLSKGLIAKCNKLMTRFWWGGREEKRKIHWCKWVNLCGHKRKGGMGFRD 60
            QAIP+YSMSCF++ KGL  + N +M RFWW   ++KR IHW KW  LC  K  GG+GFRD
Sbjct: 730  QAIPTYSMSCFRIPKGLCKELNGIMARFWWAKAKDKRGIHWVKWELLCKSKFAGGLGFRD 789

Query: 61   LECFNKVLLVKQGWRLLTNPDSFVARVLKSKYFRYSSFLEVEKKKKMLFFVWASILWGRD 120
            LE FN+ LL KQ WR+L  P+S VAR+ +++Y     FLE E       F+W S+ WG++
Sbjct: 790  LEAFNQALLAKQCWRILRTPESLVARIFRARYHPSVPFLEAEVGTNP-SFIWRSLQWGKE 849

Query: 121  LLTKGIRWRIGDENSVSIGRHNWIPSNSTLRPIYPYRGEPERLVSTLLNRQDDWNENLIS 180
            LL KG+RWR+G+  S+ +    W+P+ S  + + P +     LV  L      WN  L+ 
Sbjct: 850  LLNKGLRWRVGNGVSIQVYTDKWLPAPSFFKIMSPPQLPLSTLVCDLFTSSGQWNVPLLK 909

Query: 181  NLFHPTDARNILSIPLATIKGKDIPMWHYNKDGNYSVKSGCHVCFPQKNWLDQSCSEKME 240
            ++F   +    L IPLA++ G D  +WHY ++G YSVKSG  +   +K+ +    S +++
Sbjct: 910  DIFWDQEVDAKLQIPLASLAGHDCLIWHYERNGMYSVKSGYRLACLEKDKMSGEPSVRVD 969

Query: 241  ---KLWSYCSHLQVPSKIKMFGWKAFKDYIPSGVNLGRRGFVGVEICDRSDHYGEDSLHA 300
               K W     L++P+KIK F W+   D++P G  L  R      IC       E  LHA
Sbjct: 970  LNSKFWKKIWALKIPNKIKFFLWRCAWDFLPCGQILFNRKIAPTPICPNCHRKAESVLHA 1029

Query: 301  LWLSRNSKNLWKETPFYHLQWPTTITSLSDLMWWFKDKLNERNFNCFLILLWAIWNQRNK 360
            +WL   +K +W+ + + ++     + S  +L    +   +      F  L W +WN+RN 
Sbjct: 1030 VWLCETAKEVWRNSAWGNVCEEWRVNSFRELWHALQLSSSGEEQGLFAYLCWGLWNRRNS 1089

Query: 361  VIFMGK 364
             IF GK
Sbjct: 1090 FIFEGK 1094

[Close]

BLAST of MS022704 vs. ExPASy TrEMBL
Match: M5W5F3 (Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa026368mg PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 8.1e-72
Identity = 137/366 (37.43%), Postives = 202/366 (55.19%), Query Frame = 0


Query: 1   QAIPSYSMSCFKLSKGLIAKCNKLMTRFWWGGREEKRKIHWCKWVNLCGHKRKGGMGFRD 60
           QAIP+YSMSCF++ KGL  + N +M RFWW   ++KR IHW KW  LC  K  GG+GFRD
Sbjct: 501 QAIPTYSMSCFRIPKGLCKELNGIMARFWWAKAKDKRGIHWVKWELLCKSKFAGGLGFRD 560

Query: 61  LECFNKVLLVKQGWRLLTNPDSFVARVLKSKYFRYSSFLEVEKKKKMLFFVWASILWGRD 120
           LE FN+ LL KQ WR+L  P+S VAR+ +++Y     FLE E       F+W S+ WG++
Sbjct: 561 LEAFNQALLAKQCWRILRTPESLVARIFRARYHPSVPFLEAEVGTNP-SFIWRSLQWGKE 620

Query: 121 LLTKGIRWRIGDENSVSIGRHNWIPSNSTLRPIYPYRGEPERLVSTLLNRQDDWNENLIS 180
           LL KG+RWR+G   S+ +    W+P+ S  + + P +      V  L      WN  L+ 
Sbjct: 621 LLNKGLRWRVGSGVSIQVYTDKWLPAPSCFKIMSPPQLPLSTRVCDLFTSSGQWNVPLLK 680

Query: 181 NLFHPTDARNILSIPLATIKGKDIPMWHYNKDGNYSVKSGCHVCFPQKNWLDQSCSEKME 240
           ++F   +   IL IPLA++ G D  +WHY ++G YSVKSG  +   +K+ +    S +++
Sbjct: 681 DIFWDQEVDAILQIPLASLAGHDCLIWHYERNGMYSVKSGYRLAGLEKDKMSGEPSARVD 740

Query: 241 ---KLWSYCSHLQVPSKIKMFGWKAFKDYIPSGVNLGRRGFVGVEICDRSDHYGEDSLHA 300
              K W     L++P+KIK F W+   D++P G  L  R      IC +     E  LHA
Sbjct: 741 LNSKFWKKIWALKIPNKIKFFLWRCAWDFLPCGQILFNRKIAPTPICPKCHRKAESVLHA 800

Query: 301 LWLSRNSKNLWKETPFYHLQWPTTITSLSDLMWWFKDKLNERNFNCFLILLWAIWNQRNK 360
           +WL   +K +W+ + + ++     + S  +L    +   +      F  L W +WN+RN 
Sbjct: 801 VWLCEAAKEVWRNSAWGNVCEVWRVNSFRELWHALQLSSSGEEQGLFAYLCWGLWNRRNS 860

Query: 361 VIFMGK 364
            IF GK
Sbjct: 861 FIFEGK 865

[Close]

BLAST of MS022704 vs. ExPASy TrEMBL
Match: A0A251NPF0 (Reverse transcriptase domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_6G123900 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 8.1e-72
Identity = 137/366 (37.43%), Postives = 202/366 (55.19%), Query Frame = 0


Query: 1   QAIPSYSMSCFKLSKGLIAKCNKLMTRFWWGGREEKRKIHWCKWVNLCGHKRKGGMGFRD 60
           QAIP+YSMSCF++ KGL  + N +M RFWW   ++KR IHW KW  LC  K  GG+GFRD
Sbjct: 464 QAIPTYSMSCFRIPKGLCKELNGIMARFWWAKAKDKRGIHWVKWELLCKSKFAGGLGFRD 523

Query: 61  LECFNKVLLVKQGWRLLTNPDSFVARVLKSKYFRYSSFLEVEKKKKMLFFVWASILWGRD 120
           LE FN+ LL KQ WR+L  P+S VAR+ +++Y     FLE E       F+W S+ WG++
Sbjct: 524 LEAFNQALLAKQCWRILRTPESLVARIFRARYHPSVPFLEAEVGTNP-SFIWRSLQWGKE 583

Query: 121 LLTKGIRWRIGDENSVSIGRHNWIPSNSTLRPIYPYRGEPERLVSTLLNRQDDWNENLIS 180
           LL KG+RWR+G   S+ +    W+P+ S  + + P +      V  L      WN  L+ 
Sbjct: 584 LLNKGLRWRVGSGVSIQVYTDKWLPAPSCFKIMSPPQLPLSTRVCDLFTSSGQWNVPLLK 643

Query: 181 NLFHPTDARNILSIPLATIKGKDIPMWHYNKDGNYSVKSGCHVCFPQKNWLDQSCSEKME 240
           ++F   +   IL IPLA++ G D  +WHY ++G YSVKSG  +   +K+ +    S +++
Sbjct: 644 DIFWDQEVDAILQIPLASLAGHDCLIWHYERNGMYSVKSGYRLAGLEKDKMSGEPSARVD 703

Query: 241 ---KLWSYCSHLQVPSKIKMFGWKAFKDYIPSGVNLGRRGFVGVEICDRSDHYGEDSLHA 300
              K W     L++P+KIK F W+   D++P G  L  R      IC +     E  LHA
Sbjct: 704 LNSKFWKKIWALKIPNKIKFFLWRCAWDFLPCGQILFNRKIAPTPICPKCHRKAESVLHA 763

Query: 301 LWLSRNSKNLWKETPFYHLQWPTTITSLSDLMWWFKDKLNERNFNCFLILLWAIWNQRNK 360
           +WL   +K +W+ + + ++     + S  +L    +   +      F  L W +WN+RN 
Sbjct: 764 VWLCEAAKEVWRNSAWGNVCEVWRVNSFRELWHALQLSSSGEEQGLFAYLCWGLWNRRNS 823

Query: 361 VIFMGK 364
            IF GK
Sbjct: 824 FIFEGK 828

[Close]

BLAST of MS022704 vs. ExPASy TrEMBL
Match: A0A6J1DAR4 (uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018954 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 1.4e-71
Identity = 147/364 (40.38%), Postives = 214/364 (58.79%), Query Frame = 0


Query: 1   QAIPSYSMSCFKLSKGLIAKCNKLMTRFWWGGREEKRKIHWCKWVNLCGHKRKGGMGFRD 60
           QAIP Y+MSCF+L K LI + + +  RFWWG  +E +KIHW  W +L   K +GGMGFRD
Sbjct: 591 QAIPCYTMSCFRLPKRLIREFHHITARFWWGSSKEDKKIHWVAWNSLYLPKCEGGMGFRD 650

Query: 61  LECFNKVLLVKQGWRLLTNPDSFVARVLKSKYFRYSSFLEVEKKKKMLFFVWASILWGRD 120
           LE FNK LL KQ WR+L +P+S ++RVLK +YF+  SF+E  K      ++W SILWGRD
Sbjct: 651 LELFNKALLAKQCWRILNHPNSMLSRVLKGRYFKDCSFMEA-KISGNPSYIWRSILWGRD 710

Query: 121 LLTKGIRWRIGDENSVSIGRHNWIPSNSTLRPIYPYRGEPERLVSTLLNRQD-DWNENLI 180
           LL KG+RWRIG+ +SV I   NW+P+  TL+ +   R      VS+L++ ++  W  +++
Sbjct: 711 LLKKGLRWRIGNGDSVFIYGDNWVPNQPTLKILSSPRLPLVSRVSSLVDHEEGGWQGDVV 770

Query: 181 SNLFHPTDARNILSIPLATIKGKDIPMWHYNKDGNYSVKSGCHVCF---PQKNWLDQSCS 240
            + F P +A+ ILSIP+     +D  +W+Y K G YSV+SG  V     P       S S
Sbjct: 771 RDEFTPDEAKGILSIPIGRGAEEDRLIWNYEKTGVYSVRSGYKVALLNNPCVQAPSSSSS 830

Query: 241 EKMEKLWSYCSHLQVPSKIKMFGWKAFKDYIPSGVNLGRRGFVGVEICDRSDHYGEDSLH 300
           E++   W+    + +P+KIK+F W+   D +P+G NL +RG      C      GEDS+H
Sbjct: 831 EEVRCWWNGFWKMHIPNKIKVFLWRLCLDRLPTGCNLSKRGVEITNCCYFCGRNGEDSIH 890

Query: 301 ALWLSRNSKNLWKETPFYHLQWPTTITSLSDLMWWFKDKLNERNFNCFLILLWAIWNQRN 360
             W+ + ++ LW  + F  L  P  I   S       + L++ +F    +++W +WNQRN
Sbjct: 891 LFWICKFAEALWINSKFGKLS-PFLILRES------HESLSKADFEELCVVIWGLWNQRN 946

[Close]

BLAST of MS022704 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 169.5 bits (428), Expect = 5.1e-42
Identity = 113/386 (29.27%), Postives = 179/386 (46.37%), Query Frame = 0


Query: 2   AIPSYSMSCFKLSKGLIAKCNKLMTRFWWGGREEKRKIHWCKWVNLCGHKRKGGMGFRDL 61
           A+P+Y+M+CF L K +  +   ++  FWW  ++E + +HW  W +L  +K +GG+GF+D+
Sbjct: 2   ALPTYTMACFLLPKTVCKQIISVLADFWWRNKQEAKGMHWKAWDHLSCYKAEGGIGFKDI 61

Query: 62  ECFNKVLLVKQGWRLLTNPDSFVARVLKSKYFRYSSFLEVEKKKKMLFFVWASILWGRDL 121
           E FN  LL KQ WR+L+ P+S +A+V KS+YF  S  L      +   FVW SI   +++
Sbjct: 62  EAFNLALLGKQMWRMLSRPESLMAKVFKSRYFHKSDPLNAPLGSRP-SFVWKSIHASQEI 121

Query: 122 LTKGIRWRIGDENSVSIGRHNWIPSNSTLRPIYPYRGEPERL--VSTLLNRQD------- 181
           L +G R  +G+   + I RH W+ S      +   R  P+    VS++L   D       
Sbjct: 122 LRQGARAVVGNGEDIIIWRHKWLDSKPASAALRMQRVPPQEYASVSSILKVSDLIDESGR 181

Query: 182 DWNENLISNLFHPTDARNILSIPLATIKGKDIPMWHYNKDGNYSVKSGCHVC--FPQKNW 241
           +W +++I  LF   + + I  +     +  D   W Y   G+Y+VKSG  V      K  
Sbjct: 182 EWRKDVIEMLFPEVERKLIGELRPGGRRILDSYTWDYTSSGDYTVKSGYWVLTQIINKRS 241

Query: 242 LDQSCSEK-----MEKLWSYCSHLQVPSKIKMFGWKAFKDYIPSGVNLGRRGFVGVEICD 301
             Q  SE       +K+W      Q   KI+ F WK   + +P    L  R       C 
Sbjct: 242 SPQEVSEPSLNPIYQKIWK----SQTSPKIQHFLWKCLSNSLPVAGALAYRHLSKESACI 301

Query: 302 RSDHYGEDSLHALWLSRNSKNLWKETPF---YHLQWPTTITSLSDLMWWFK----DKLNE 361
           R     E   H L+    ++  W  +        +W  +I    +L W F     +   E
Sbjct: 302 RCPSCKETVNHLLFKCTFARLTWAISSIPIPLGGEWADSI--YVNLYWVFNLGNGNPQWE 361

Query: 362 RNFNCFLILLWAIWNQRNKVIFMGKE 365
           +       LLW +W  RN+++F G+E
Sbjct: 362 KASQLVPWLLWRLWKNRNELVFRGRE 380

[Close]

BLAST of MS022704 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 132.1 bits (331), Expect = 9.0e-31
Identity = 65/153 (42.48%), Postives = 91/153 (59.48%), Query Frame = 0


Query: 2   AIPSYSMSCFKLSKGLIAKCNKLMTRFWWGGREEKRKIHWCKWVNLCGHKR-KGGMGFRD 61
           A+P Y+MSCF+LSK L  K    MT FWW   E KRKI W  W  LC  K   GG+GFRD
Sbjct: 2   ALPVYAMSCFRLSKLLCKKLTSAMTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFRD 61

Query: 62  LECFNKVLLVKQGWRLLTNPDSFVARVLKSKYFRYSSFLEVEKKKKMLFFVWASILWGRD 121
           L  FN+ LL KQ +R++  P + ++R+L+S+YF +SS +E     +   + W SI+ GR+
Sbjct: 62  LGWFNQALLAKQSFRIIHQPHTLLSRLLRSRYFPHSSMMECSVGTRP-SYAWRSIIHGRE 121

Query: 122 LLTKGIRWRIGDENSVSIGRHNWIPSNSTLRPI 154
           LL++G+   IGD     +    WI   + L P+
Sbjct: 122 LLSRGLLRTIGDGIHTKVWLDRWIMDETPLPPL 153

[Close]

BLAST of MS022704 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 90.1 bits (222), Expect = 3.9e-18
Identity = 82/298 (27.52%), Postives = 131/298 (43.96%), Query Frame = 0


Query: 88  LKSKYFRYSSFLEVEKKKKMLFFVWASILWGRDLLTKGIRWRIGDENSVSIGRHNWIPSN 147
           +K++YF+  S L+  K +K   + WAS+L G  LL KG R  IGD  ++ IG  N + S+
Sbjct: 1   MKARYFKDVSILDA-KVRKQQSYGWASLLDGIALLKKGTRHLIGDGQNIRIGLDNIVDSH 60

Query: 148 STLRPIYPYRGEPERLVSTLLNRQDD---WNENLISNLFHPTDARNILSIPLATIKGKDI 207
              RP+       E  ++ L  R+     W+++ IS     +D   I  I LA  K  D 
Sbjct: 61  PP-RPLNTEETYKEMTINNLFERKGSYYFWDDSKISQFVDQSDHGFIHRIYLAKSKKPDK 120

Query: 208 PMWHYNKDGNYSVKSGCHVC-------FPQKNWLDQSCSEKMEKLWSYCSHLQVPSKIKM 267
            +W+YN  G Y+V+SG  +         P  N    S   K  ++W    +L +  K+K 
Sbjct: 121 IIWNYNTTGEYTVRSGYWLLTHDPSTNIPAINPPHGSIDLK-TRIW----NLPIMPKLKH 180

Query: 268 FGWKAFKDYIPSGVNLGRRGFVGVEICDRSDHYGEDSLHALWLSRNSKNLWKETPFYHLQ 327
           F W+A    + +   L  RG      C R     E   HAL+            PF  + 
Sbjct: 181 FLWRALSQALATTERLTTRGMRIDPSCPRCHRENESINHALF----------TCPFATMA 240

Query: 328 WPTTITSL--------------SDLMWWFKD-KLNERNFNCFLILLWAIWNQRNKVIF 361
           W  + +SL              S+++ + +D  +++ +    + L+W IW  RN V+F
Sbjct: 241 WRLSDSSLIRNQLMSNDFEENISNILNFVQDTTMSDFHKLLPVWLIWRIWKARNNVVF 281

The following BLAST results are available for this feature:

BLAST of MS022704 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_024950112.1	1.8e-73	38.46	uncharacterized protein LOC112496847 [Citrus sinensis]	[more]
VVA32947.1	1.7e-71	37.43	PREDICTED: retrotransposon [Prunus dulcis]	[more]
ONI01138.1	1.7e-71	37.43	hypothetical protein PRUPE_6G123900 [Prunus persica]	[more]
XP_015382226.1	2.2e-71	38.02	uncharacterized protein LOC107175329, partial [Citrus sinensis]	[more]
XP_022150918.1	2.9e-71	40.38	uncharacterized protein LOC111018954 [Momordica charantia]	[more]

BLAST of MS022704 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P93295	1.3e-29	42.48	Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 ...	[more]
P0C2F6	3.0e-23	24.40	Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1...	[more]

BLAST of MS022704 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A803QH07	2.1e-72	36.91	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]
A0A5E4FZN9	8.1e-72	37.43	PREDICTED: retrotransposon OS=Prunus dulcis OX=3755 GN=ALMOND_2B007697 PE=4 SV=1	[more]
M5W5F3	8.1e-72	37.43	Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=...	[more]
A0A251NPF0	8.1e-72	37.43	Reverse transcriptase domain-containing protein OS=Prunus persica OX=3760 GN=PRU...	[more]
A0A6J1DAR4	1.4e-71	40.38	uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]

BLAST of MS022704 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29090.1	5.1e-42	29.27	Ribonuclease H-like superfamily protein	[more]
ATMG00310.1	9.0e-31	42.48	RNA-directed DNA polymerase (reverse transcriptase)-related family protein	[more]
AT3G09510.1	3.9e-18	27.52	Ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026960	Reverse transcriptase zinc-binding domain	PFAM	PF13966	zf-RVT	coord: 215..308 e-value: 3.1E-6 score: 27.8
None	No IPR available	PANTHER	PTHR33116	REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATED	coord: 1..272
None	No IPR available	PANTHER	PTHR33116:SF45	SUBFAMILY NOT NAMED	coord: 1..272

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS022704.1	MS022704.1	mRNA