MS022700 (gene) Bitter gourd (TR) v1

Overview


Name	MS022700
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	ULP_PROTEASE domain-containing protein
Location	scaffold41: 179893 .. 180105 (-)
RNA-Seq Expression	MS022700
Synteny	MS022700

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GCGTTTGTATTAGACGGTATCAAGAAAGAGAAAATTTTGAACTCGGCATCTAAAAACTGGCGTCAATTCAAATCTTTATTAGCACGAAAATATGTCTATCAAAATAAGGATGATTTGGATTGTAAAAGGAATCCACCCAAATTGTATCCTTTCATTAGTCAACAAGATTGGAATAACTTTATCCATGCAAGACTGAACGAAGAGTTTCAGGTA

mRNA sequence

GCGTTTGTATTAGACGGTATCAAGAAAGAGAAAATTTTGAACTCGGCATCTAAAAACTGGCGTCAATTCAAATCTTTATTAGCACGAAAATATGTCTATCAAAATAAGGATGATTTGGATTGTAAAAGGAATCCACCCAAATTGTATCCTTTCATTAGTCAACAAGATTGGAATAACTTTATCCATGCAAGACTGAACGAAGAGTTTCAGGTA

Coding sequence (CDS)

GCGTTTGTATTAGACGGTATCAAGAAAGAGAAAATTTTGAACTCGGCATCTAAAAACTGGCGTCAATTCAAATCTTTATTAGCACGAAAATATGTCTATCAAAATAAGGATGATTTGGATTGTAAAAGGAATCCACCCAAATTGTATCCTTTCATTAGTCAACAAGATTGGAATAACTTTATCCATGCAAGACTGAACGAAGAGTTTCAGGTA

Protein sequence

AFVLDGIKKEKILNSASKNWRQFKSLLARKYVYQNKDDLDCKRNPPKLYPFISQQDWNNFIHARLNEEFQV

Homology

[Close]

BLAST of MS022700 vs. NCBI nr
Match: XP_022136080.1 (uncharacterized protein LOC111007859 isoform X4 [Momordica charantia])

HSP 1 Score: 78.2 bits (191), Expect = 3.2e-11
Identity = 36/70 (51.43%), Postives = 49/70 (70.00%), Query Frame = 0


Query: 1   AFVLDGIKKEKILNSASKNWRQFKSLLARKYVYQNKDDLDCKRNPPKLYPFISQQDWNNF 60
           +FVLD   K  IL SASK +R FKS L R Y+   KD+  C +NPP+ YP I Q+ WN+F
Sbjct: 99  SFVLDWRSKHHILQSASKKFRTFKSTLTRTYILPFKDEPICLQNPPEKYPHIDQEQWNSF 158

Query: 61  IHARLNEEFQ 71
           ++ARL+EE++
Sbjct: 159 VNARLSEEWE 168

[Close]

BLAST of MS022700 vs. NCBI nr
Match: XP_022136076.1 (uncharacterized protein LOC111007859 isoform X1 [Momordica charantia])

HSP 1 Score: 78.2 bits (191), Expect = 3.2e-11
Identity = 36/70 (51.43%), Postives = 49/70 (70.00%), Query Frame = 0


Query: 1   AFVLDGIKKEKILNSASKNWRQFKSLLARKYVYQNKDDLDCKRNPPKLYPFISQQDWNNF 60
           +FVLD   K  IL SASK +R FKS L R Y+   KD+  C +NPP+ YP I Q+ WN+F
Sbjct: 99  SFVLDWRSKHHILQSASKKFRTFKSTLTRTYILPFKDEPICLQNPPEKYPHIDQEQWNSF 158

Query: 61  IHARLNEEFQ 71
           ++ARL+EE++
Sbjct: 159 VNARLSEEWE 168

[Close]

BLAST of MS022700 vs. NCBI nr
Match: XP_022136079.1 (uncharacterized protein LOC111007859 isoform X3 [Momordica charantia])

HSP 1 Score: 78.2 bits (191), Expect = 3.2e-11
Identity = 36/70 (51.43%), Postives = 49/70 (70.00%), Query Frame = 0


Query: 1   AFVLDGIKKEKILNSASKNWRQFKSLLARKYVYQNKDDLDCKRNPPKLYPFISQQDWNNF 60
           +FVLD   K  IL SASK +R FKS L R Y+   KD+  C +NPP+ YP I Q+ WN+F
Sbjct: 99  SFVLDWRSKHHILQSASKKFRTFKSTLTRTYILPFKDEPICLQNPPEKYPHIDQEQWNSF 158

Query: 61  IHARLNEEFQ 71
           ++ARL+EE++
Sbjct: 159 VNARLSEEWE 168

[Close]

BLAST of MS022700 vs. NCBI nr
Match: XP_022136077.1 (uncharacterized protein LOC111007859 isoform X2 [Momordica charantia])

HSP 1 Score: 78.2 bits (191), Expect = 3.2e-11
Identity = 36/70 (51.43%), Postives = 49/70 (70.00%), Query Frame = 0


Query: 1   AFVLDGIKKEKILNSASKNWRQFKSLLARKYVYQNKDDLDCKRNPPKLYPFISQQDWNNF 60
           +FVLD   K  IL SASK +R FKS L R Y+   KD+  C +NPP+ YP I Q+ WN+F
Sbjct: 98  SFVLDWRSKHHILQSASKKFRTFKSTLTRTYILPFKDEPICLQNPPEKYPHIDQEQWNSF 157

Query: 61  IHARLNEEFQ 71
           ++ARL+EE++
Sbjct: 158 VNARLSEEWE 167

[Close]

BLAST of MS022700 vs. NCBI nr
Match: XP_021801251.1 (uncharacterized protein LOC110745471 isoform X1 [Prunus avium])

HSP 1 Score: 77.8 bits (190), Expect = 4.2e-11
Identity = 35/71 (49.30%), Postives = 47/71 (66.20%), Query Frame = 0


Query: 1   AFVLDGIKKEKILNSASKNWRQFKSLLARKYVYQNKDDLDCKRNPPKLYPFISQQDWNNF 60
           AFVL    ++ +L SAS  WRQFKS L RKY+   KD+ +  +NPP+ Y FI QQ W  F
Sbjct: 100 AFVLAPKSRKMVLTSASNRWRQFKSDLTRKYIMPFKDEAEALKNPPEDYGFIKQQHWKQF 159

Query: 61  IHARLNEEFQV 72
           ++ RL +EFQ+
Sbjct: 160 VNGRLTKEFQI 170

[Close]

BLAST of MS022700 vs. ExPASy TrEMBL
Match: A0A6J1C2V2 (uncharacterized protein LOC111007859 isoform X4 OS=Momordica charantia OX=3673 GN=LOC111007859 PE=3 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.6e-11
Identity = 36/70 (51.43%), Postives = 49/70 (70.00%), Query Frame = 0


Query: 1   AFVLDGIKKEKILNSASKNWRQFKSLLARKYVYQNKDDLDCKRNPPKLYPFISQQDWNNF 60
           +FVLD   K  IL SASK +R FKS L R Y+   KD+  C +NPP+ YP I Q+ WN+F
Sbjct: 99  SFVLDWRSKHHILQSASKKFRTFKSTLTRTYILPFKDEPICLQNPPEKYPHIDQEQWNSF 158

Query: 61  IHARLNEEFQ 71
           ++ARL+EE++
Sbjct: 159 VNARLSEEWE 168

[Close]

BLAST of MS022700 vs. ExPASy TrEMBL
Match: A0A6J1C398 (uncharacterized protein LOC111007859 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111007859 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.6e-11
Identity = 36/70 (51.43%), Postives = 49/70 (70.00%), Query Frame = 0


Query: 1   AFVLDGIKKEKILNSASKNWRQFKSLLARKYVYQNKDDLDCKRNPPKLYPFISQQDWNNF 60
           +FVLD   K  IL SASK +R FKS L R Y+   KD+  C +NPP+ YP I Q+ WN+F
Sbjct: 99  SFVLDWRSKHHILQSASKKFRTFKSTLTRTYILPFKDEPICLQNPPEKYPHIDQEQWNSF 158

Query: 61  IHARLNEEFQ 71
           ++ARL+EE++
Sbjct: 159 VNARLSEEWE 168

[Close]

BLAST of MS022700 vs. ExPASy TrEMBL
Match: A0A6J1C2H7 (uncharacterized protein LOC111007859 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007859 PE=3 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.6e-11
Identity = 36/70 (51.43%), Postives = 49/70 (70.00%), Query Frame = 0


Query: 1   AFVLDGIKKEKILNSASKNWRQFKSLLARKYVYQNKDDLDCKRNPPKLYPFISQQDWNNF 60
           +FVLD   K  IL SASK +R FKS L R Y+   KD+  C +NPP+ YP I Q+ WN+F
Sbjct: 99  SFVLDWRSKHHILQSASKKFRTFKSTLTRTYILPFKDEPICLQNPPEKYPHIDQEQWNSF 158

Query: 61  IHARLNEEFQ 71
           ++ARL+EE++
Sbjct: 159 VNARLSEEWE 168

[Close]

BLAST of MS022700 vs. ExPASy TrEMBL
Match: A0A6J1C4J7 (uncharacterized protein LOC111007859 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111007859 PE=3 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.6e-11
Identity = 36/70 (51.43%), Postives = 49/70 (70.00%), Query Frame = 0


Query: 1   AFVLDGIKKEKILNSASKNWRQFKSLLARKYVYQNKDDLDCKRNPPKLYPFISQQDWNNF 60
           +FVLD   K  IL SASK +R FKS L R Y+   KD+  C +NPP+ YP I Q+ WN+F
Sbjct: 98  SFVLDWRSKHHILQSASKKFRTFKSTLTRTYILPFKDEPICLQNPPEKYPHIDQEQWNSF 157

Query: 61  IHARLNEEFQ 71
           ++ARL+EE++
Sbjct: 158 VNARLSEEWE 167

[Close]

BLAST of MS022700 vs. ExPASy TrEMBL
Match: A0A6P5REI7 (uncharacterized protein LOC110745471 isoform X2 OS=Prunus avium OX=42229 GN=LOC110745471 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 2.0e-11
Identity = 35/71 (49.30%), Postives = 47/71 (66.20%), Query Frame = 0


Query: 1   AFVLDGIKKEKILNSASKNWRQFKSLLARKYVYQNKDDLDCKRNPPKLYPFISQQDWNNF 60
           AFVL    ++ +L SAS  WRQFKS L RKY+   KD+ +  +NPP+ Y FI QQ W  F
Sbjct: 100 AFVLAPKSRKMVLTSASNRWRQFKSDLTRKYIMPFKDEAEALKNPPEDYGFIKQQHWKQF 159

Query: 61  IHARLNEEFQV 72
           ++ RL +EFQ+
Sbjct: 160 VNGRLTKEFQI 170

The following BLAST results are available for this feature:

BLAST of MS022700 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022136080.1	3.2e-11	51.43	uncharacterized protein LOC111007859 isoform X4 [Momordica charantia]	[more]
XP_022136076.1	3.2e-11	51.43	uncharacterized protein LOC111007859 isoform X1 [Momordica charantia]	[more]
XP_022136079.1	3.2e-11	51.43	uncharacterized protein LOC111007859 isoform X3 [Momordica charantia]	[more]
XP_022136077.1	3.2e-11	51.43	uncharacterized protein LOC111007859 isoform X2 [Momordica charantia]	[more]
XP_021801251.1	4.2e-11	49.30	uncharacterized protein LOC110745471 isoform X1 [Prunus avium]	[more]

BLAST of MS022700 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS022700 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C2V2	1.6e-11	51.43	uncharacterized protein LOC111007859 isoform X4 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1C398	1.6e-11	51.43	uncharacterized protein LOC111007859 isoform X3 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1C2H7	1.6e-11	51.43	uncharacterized protein LOC111007859 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1C4J7	1.6e-11	51.43	uncharacterized protein LOC111007859 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A6P5REI7	2.0e-11	49.30	uncharacterized protein LOC110745471 isoform X2 OS=Prunus avium OX=42229 GN=LOC1...	[more]

BLAST of MS022700 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS022700.1	MS022700.1	mRNA