MS022696 (gene) Bitter gourd (TR) v1

Overview


Name	MS022696
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Vesicle transport protein SEC20
Location	scaffold41: 114996 .. 123510 (+)
RNA-Seq Expression	MS022696
Synteny	MS022696

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACAAGGTGTCAGAGGAGGTGGATCGGGTGAAAAATGAGTGGAACGATGCTTACCATAAGACTCTTGATCAGATTAAAGCAATTGAAGTATATGAGAAACAAAGTGAGTCGACGGAGAAGAATTCGCTCCCAAGATTGAATGCCCTCGCACAAGATGGATTGAATTTGCTATCTTCGTTAGAATTCAAGCTTGATCTTCTTGCGCCCCAGTTGCTCTCTGATTCCGAAGTTGAGGCTGCTCAATCATTGATTGAATCTTGGAAAAATCAATCCCACAAGTAACTCATCTCACTCTTCCTTTTAATTGAATTGTTGCATATTGAGCATCTAGAATTTGACTCGAATTTCTTCATTGTTGTTTGGTAGTAACGAATGTTTTGTGTATATATTTCAGTTTGCGATCGAGTCTGAGAAATGCAAATATGCAAGCAAAAGCCAACATGAGAAAGGCTGCTCAGGAGGAGGTGACTATCATTCAAACTGGTTTTTATCGAATTGTCGAAAACAGTTACAGATTAGCCATAGTTTTTCTTACTGTTAAAATGTGGTATTCATCCATCATTTCCTGAATTGAAAATTTATTTAAGATTCATCCATGTGAAAATTTATGTTATTCTCAAAATTTTGGTGAATTTCATTGTAGAGAGAACGCCTTCTAGGCGGAGGAGAAGAGTCCACAATTCGCAGACGGAATTTACAGTATGTTGTCAATACTTAATGTTTTCAGAAGATTTATAATAACTTTCTAAAACTCTGGTATTAAATTCCATTTCTTTTGTAATGTACAAAATCTTTATTTCTCCTTTTGCAGAACTAAGGCTGGAATGACATCTGCTGCAGAAAGCATCACAGAGAGCCTTCGTCGCACCCGTCAACTTATGGTTCAGGTCTGTTGCTGTTGTTATAGTTTTAATTCTCTTCGAAGCATGGATACGGACACGAGACATGATACGGCGTGACATATCATTTTAAAGACACCATTTTTTAAATATATCATGTTTATACATGAAGGAATTTCAAAGTCGATAAGTTTATCCATTTATGTGGTTTTAAAAATGAGTTTTATGTATTTCTCTGTCATTTTGTCCTATATTATTATTTATGTCTATTTATTATGCTTAACAAGTGTTCGATAAGTGTCAAACAAGTGTTGGAGAGTTGGAGTGTCGGATAAGTGTTGGACACGGACACATCCGTGCTTCTCAGTTTCTAATCTGTTTACTTTGACCTAGATTGAATTTTAAATTTCCTTTCTTTTGAGGATGTAACGTTCTTGAATATCGTATCTGTAGGAAGTGGAAAGAACCGCAAACACGATTGAGACTTTCGGTATGTTCTTACAATGTTTTCAAATATCTCTTCATGGTAGAAATTTCAAAAATCTCTTGTCGTTCAATTGTACATGGTTTATTTGAATGCAAATAAACCATGTACGATCTTACCTTGAGCTGAGCAATCTAAATTCTTTCTATACCTGTAGACTTTATTTATTCCTTCAGATAATTAATTAGAAAGTAAGGCATAATATAATGTTTATTTATTTGTGAGAATGTTTGTTTAGTATTTAATTTGACTAGCATCTCATTTAGTGATCTAATAACACTGCGCATCTCGATCCGAGAGAAATGATGAGGAATCGGTGGAACTTGGAAGTAGTTTCATTTCCTTGTTGTTTGCAGAATTTCTCTAGAACAAGTCAAAGTACGTCTTGGTTTGAATGGAGTATATTGATTTCATAGTCATTGTCGTTCAATTGTTACTTGGACCATTTGAAGTCCACATTAAATCTTTTTGTTCTGCAGTTTGCATTGTCTCTAATTAGTAATGCAATATCAGTTTAGAGGTTTATGATGATCTGTATGGATCCTAAATTATGATCATGATGAGGAATTAAACTTGTGCCACTCTCACAGTATGAAATCAAAAAAAAAAAAAAAAAAATTGGGTGTGGGGGGAGATTAAAAGCTAGCTTTTATTCAGATAAGCAAAGGTACAAAGAATAAGAGCATACAAAAACAATGGCCTAGAAATGGAGCCTAAAAACAAAACCTGGAAAAAGAAGGAAAAAAAAGAACAAATAAAGGAGAAATTGGCTCCCATTGTTAAGAACCAAGAATAAAGAAAAATTGGAAAAAAGCTTAGTCATAAAAACTCAAAAGGAAGGCATTGAGATGCACCAAGCTCCAAACCTCTTTCCAAGACCTTTCAGATACCCAAAAGGAATTTCTCTACTTCCTTCTGTTAGAGTATATATATTAGTATATTTTATATTCTTGTATTAATATTAATTTGTCCTTTACCTTCTCCTTATAGGATTAGGTCAACCTTGTATATTTGTGTCTATATATAGACTTTAATAATGAGAATAGATAACATTGGATTCTCTCCGACCTTAGTCTCTACATCTTCCAAGTCAAATGAACCAAATAACGTTAAAGATTATACCTCTGAGTTGTTCAAAAGAATCTCTTCCATCATAGCACAACCATCCTTGTTGAAGGCTAACCACACCCCAAAAGTCTGAAAATCACATAAAACGGGATTTAAAAGAACCTCCTCCATTGTCCTGTTAATTGTTTGACCCATTTATATTTGAGCTGGACCTGGACCTTTATAATTGAGCTGGAATCCAAAATGGAACTTTCCTTCATTTTACCCATGCGACTTTCTGTTGTGGAGGCCTCATCAGAAAAGTTTGCTACATGGGCTTAGTGGAGTGATTTTGTAATTCTCAGATTAATTAGAGAAAGCATGTGAGATGGTGTGTTAATTATCCTTCCATAATTTTACATTCTTCTTCTTCGTTTTTCTGAGAAGCAAAATTGAGTGTGGGAGAATTTTCCTCTGTAATTGCTGGAAATTCCTTCCTCGATTGTAATGGCTCGATGAACTGAGATGCAACGAAGGCTATTACTTGTCTTGCATAGTGGATGTAGATGTAGACCTATGTGGTCGAACCACTATAAGTACTGTGTGTTCTCTTTTTCTTCTACACTTTTACTTTGTTTTCTGCTGAAGTATTGCTCCTGATTAAGACTGGTAGTATCAATCTGTGCATCTGTTGGTTATTGGATCTGTCTTTTTGGGTTTATTATTTTAACAAATTTTATCAGAGCTGGACATTGATCTTACTGCTGCTTATTTTCTTCTGATACTGCGATACTTGTTACTGTCATCAAAGTTTGAAGTTCAACCTAGATTCATCATTATTCAACTCGTCTTTTATCAGTTTGTTTCGTATTTGTTCTGAATCTCTATCTAATTGTTCTATTTCTTCGACTCTGTTTTGTGAAATTTTTGTGATAATGTCTGCCAAGTTTGAATTGAATAAATTTGACGGTAAAGGGGACTTTAGCCTCAGGGGAAGAAATTAAAAGCCTTCTGGTCCAACAAAAAGGTTGGAAAATTCTTGACAATCCAGATACTCGGCCAGAAACATTCACAAAGGAAAAACGATGAAAAATGAAAGAGATTGCTTACAGTACAACGATACTTCATTTGTCTAGGTTAATGATACTGATAAGGTTGTAGATCTTTGGAAGAAGCTAGAGACTACTCTATACTTAGTAAATCTCTACCTAATAAGATTTACCTTGAGGAAAAGTTTTTCAGATATAAAATGCAAGCCTCTAAATCACTAGAAGAAAGCTTGGATGACTTTAACAGAATATGCATGGACTTAGCAAACATAGGAGAAAAACTTGTTGATGAGAATCAAGCGATAATATTGTTGAATTCACTGCCTGAAAATTACAAAGAAGTAAAAACCGCAATTAAGTACAGTATGGATTTGTTATCTCTATCTACAGTCCTAGATGATCTTAGATCAAAGGACTTTGAGATAAAATCAGGAAAAAAAAAAGGAAGTAGAGGGCTTGGTGGCTAGGGATACAACAGAAAACAAATCCAAAGCTCCAGCAAAGTCAAATGAAAATAGATAAAAGTCAATAGGTAAAGAAAAGAGGAAGTGTTACTACTGCCATTAGGAAGGGCATCTCATTAGGAACTGTTTCCAGCTAAAAAATAAAAATAAAAATAAAATCCCAGAGACGGATGAAAGACAAACCTCAGCAAGTGTCCATGAGGGATATGAATCTGCAGAGGTGTTGACAGTTTCAGAATCTGCTCTCTGTGATGAGTGGATCCTTGACTCGGGTTGTTCATACCATATGACCCTTTGTAAAGATTACTTTCAAGACTTGAAGGAGATTGATGGAAGTAAAGTCTTAATGGGCAATGATCATCAATGTCAAGTAAAGGGGATTAGCTCAGTCAAATTAAGACTATATGATTAATGATGGTTTGGACAAGATTCTACCGGAGGTGAGATCTGTCCCTGATTTGAAGAGAAATTTGATTTCTCTAGGACCGTTGGATAAGGGAAGTTATTCATATAAATCAGAGGGTAGAGTGCTACAAATTTATAAGGGATCCTTATTAAAAATGAAGGGTACTTCGAGAAATGGTTTGTATTTTCAAGGCTCTTCCATTAATTCACATGAGGTGAACACTGTTGATGATGTAATATCAGTAGAATTAGTTTTCTTAATCAGTTGGTATTTTGTTTAGTTTTAAGTCAGTTGGCTTTCTGTTTTAAAGTTAGTTGGCAACTAGTTTGTTTTGGGCAGTTAAGTCCTTTGTTTCGGGTTTCCAGCCTCTTTAAATAGCTGGCCCTTTTTGTTGATCATTAATTCAATAATAGTTCAAGATTTCTCCTTTTTTGGTTTACACCAGTTGAGGAACAAGTAAATTCAGAAATTGTTCTTTGGCATAAGAGACTTGCTCATGTCTCTCAAAAGGGCTTGGATGAACTTGGTAAACAAGGTTTATTAGGAAAATTTAAACCAACTGAACTTCCATTTTTTGAGCACTGCACTTGAGGTAAGTCAACAAGAATTAAATTCTCAAAAGGCTTACATACTTCTAAAGGAGTTCTGGAATATGTCCATTCGGATCTTTGGGGTCCAGCTAGAGTTACCACACTTGGAGGTGATAAATACTTTATGACAACAGTGGATGACTACTCTAGAAAATTATGGGTATATGTGTTGAAGAGGAAAAAATGATGCTTTTGAAACCTTTGTAAACTGGAAAATTTTAGTTGAAAAGCAGACCGGAAAAAGAATAAAAACCTTGAGAACAGACGATGCTCTTGAATATTTTAATGACAGTTTTATAAATCTTTGTAAGAAGGGTGAAATTAAGAGGCATCATACAGTTCCCTACACACCCCAACAGAATGGCTTGGCAGAAAGGTTTAATAGAACTTTGCTTGAGAAGGGTGTGTTGTATGCTTGCTAATGCAAGGCTTCCTAAGTTGTTTTGGGGGGAAGCTATTTCTATTGCAGCTTATCTAATAAATAGGAGCCCATCTACTGCTCTAAATTTGAAAACACTTCAAGAAGTGTGGTCTGGAAAAAACCTCCAAGCTTAAGTCATTTAGAGATCTTTGGTTGTGCAGCATATGCACATTTTCCCAAAATAAGCTTGAACCTCAAGCAAGAAAATGTATTCTTCTTGGATATCCATCAGAAGTTAAAGGCTATAACTTTTTTTTTTTTTTTCTTTTTTCTCCTGTGGTCAGAAACAAGTATTTCATATGTATGAAATAACCAAAAAGCTCATAATGGCTAATTACAAGAAAGCCCGCCAATTATAGATTACGGCAGAATGGGAGTAATTGTTGAAGGGGGAATAATAAGATTTTACACCATCCAAGGGCTAAAACAATAACCCTATAAAAAAAACCTCAAATGGGAGAAGTGTGTCATTGAAAATCTGATTGTTCCTTTCCAACCAAATGCTCCAAATGAAGGCACGAACTAACTGTTCCCAAAGAACTCCCTGGTGTGTTAGAATAGACCAGGGACCCCTGTAAGAATTGTAGCTATTGCTAGGCCATGTTTCTGTGGTTACTAGAGAGAGGTGGAAGATGCATCGTAATTTGTAAGTAGAGATGTGAAGTTTGATGAAAATGATTTTCCATGGGAAAAAGAAGGAAGCCTTGGTTATGATCAAAATGTTGAGTCCCAAATTAGTTCTTTTGAGATAGAACTTGAAGGCACTCAAACAACACACCTCAGACAGCAGCTACTTCAGTACATCAACCTTCTCAGTCAGAAACTGTTGCTTCAGGGCATCAAATTTCTGAAATTTTTCAGAGTCAGCAACTAGTTGATACTTCTAATTCTCAACTTCATGATGTGATAGAATCAGTTGATAATGTAAATTCTGACCCTCATTTGTCTAATTATCAATTGACAAGAGAGACAAATAAGACCCCCATCAAGATATGATTCATCTAGCGTTGCGATAGATAATTCTGATATCACAGCTTATGCTTTAAATTGCAGTGATATTTTTGGTGATAAACCTGTTACATATGATGAAGCTATAAACTCTAAACATAGTGATAAGTGGCTTGAATCAATGAAAGAAGAACTGAATTCTTCGCACAGAAATGAAATATGGGAACTGAAAAACCAGAAATCATAAGCTTGTTGATTCTGAGTGGATCTACAAGCTAAAACCAAGCATTAGTGGGGTGAACCAACCAAGTTTTAAAGCAAGGCTTGTAGCTAGGGTAATACACAAGAGTTGCTCAGAAAATGGATCAGAAAATTTCAGATGGAATCAGCCAAACCAGTCAAGATACCTCTAGCTCAACACTTTAAATTATCCAAGCAGCAGTCACCTAAAACAGAGGAAAAAAAAGTGAAAATGTCCGAAATTCCTTATGCAAATGCTGTAGGTTTCTATGGCTCAAGTGGTCAATAAGGGCCTTTGTAAATAGTAAAGGACTTAGAGGGAATGAGTTCAAACCATGGTGGCCACCTACCTAGGATTTAATATCCTACGAGTTACCTTGTCAACCAAATGTAGTAGGGTCAGGCGGTTGACCCGTAATTAGTCGAGGTGAGCGCAAGCTGGCCCGGACACACGGATTTCAAAAAAAAAAAAAAATGCTGTAGGTTTCTTGATGTATGGGATGACTTGTACGCGTCTGGATCTAGCTCATGCTTTGAGCATCGTTAGTGAATATATAAAGTTGCCCAGGATTCAGGAAAGTCCCATTGGGAGGCAGTTAAATGGATCCTTCGATACATAAAGGGAACAAAAGACACTAGGTTGATTTATGCAAATTAGAAGTCTGATATTCCTTGTCTCGAAGGCTTTGTGGATGAAGATTTTGCAGCTGACTTCGATAAAAGAGGACGACCCACTACAGGTTTTGTGTTCAAGTTGTATGGAAATACAATTAGTTGGAGATTTTCCCTTCAATCTGTGGTTGCATTATCAACTACTCGGTCAGAGTATATTGCACTTACGGAATCTGCCTAGGAATCAGTGTGGTTAAAGGGGCTGATATCTGAGTTATTGGGAGAAATTTCAGAACCTATTATTCACTGTGATAGTCAGAGTGCTTTAGTACTTTCTAAAAATCCTCTTTATCATGACAAGACAAAACATGTAGATTTAGTGAACAAGAATGAAGTGATACTTAAAAAGGTAGCAACTGATGTGAACCCAGCAGACATGTTACAAAATCCATTTCAGGTGTAAGATTTGAATGCCTCAATGACATACTTAAAGTAGTAGGTGTTGGCTAATCCTCTCTACTGCGAGTATTAAGTGCTTGATGAGTTATTTTCTGCTGTTGCGGTTCTGTTTTTCCTTTGAGCTTTGATATAATTGGTTCAAGAGGGTGATTTGTTAATTGTTTGACCCATTTATATATGAGCTGGACCTTTATAATTGAGCTTGATCTGGAATCCAAGCTGGAGCTTTCCCTCATTTTTTACCCATGTGACTTTCTATTGTGGAGGCCTCGTCAGCAAAATTTTTTACGCAGGCTTAGTGGAGTGATTTTGTAATTTTCAGATTATAAGAGAAAGGGTGTGAGAGGCTGTTTACATTCTTCTTCTTTGTTTTTCTGAGAGAGCAAAATAGAGTGTGTGGGAGAATTCTCCTCTGTAATTGCTGGAAATTCTTTCCTCGATTGTAATGGCTCGATGAACTGAGATGCAATGAAGGTTATTACTCATCTTGCACAGTGGACGTATACCTATGTGGTCGAACCACTGTAATTAACTTGTGTTCTTTTTTTCTTCTACTTTTTTACTTTTTTCTTTCTGCTGAAGTATTGCTCCTGATTAAGATTGATAGTATCAATATGTGCATGTGCTGGTTATTGGATCTGTTTTTCTTGGTTTATTATTTTAACACGTCCAAAATTTCAAAGGTGTTATGTTTTCTTATTTTAGCCTAGTTTTTTTTTTCCTTAAAAATCATATGATAGAGAATCAGCAGACATTAACTGATTCTTTGAATGAATTCAAGGATATGTATCTCTGTATGTTTTGTGAACCACAGCTAGCTTTACGTGGTTTTTACAGAGGAATCAACTGGAGTGTTGAAGAAGGCTGAGAGTGAATACAAGGGGCACCGCTCATTGTTGACTCGGACCAGAAACTTACTTTCCACAATGCAACGGCAGGATGTAATGGACAGG

mRNA sequence

ATGGACAAGGTGTCAGAGGAGGTGGATCGGGTGAAAAATGAGTGGAACGATGCTTACCATAAGACTCTTGATCAGATTAAAGCAATTGAAGTATATGAGAAACAAAGTGAGTCGACGGAGAAGAATTCGCTCCCAAGATTGAATGCCCTCGCACAAGATGGATTGAATTTGCTATCTTCGTTAGAATTCAAGCTTGATCTTCTTGCGCCCCAGTTGCTCTCTGATTCCGAAGTTGAGGCTGCTCAATCATTGATTGAATCTTGGAAAAATCAATCCCACAATTTGCGATCGAGTCTGAGAAATGCAAATATGCAAGCAAAAGCCAACATGAGAAAGGCTGCTCAGGAGGAGAGAGAACGCCTTCTAGGCGGAGGAGAAGAGTCCACAATTCGCAGACGGAATTTACAAACTAAGGCTGGAATGACATCTGCTGCAGAAAGCATCACAGAGAGCCTTCGTCGCACCCGTCAACTTATGGTTCAGGAAGTGGAAAGAACCGCAAACACGATTGAGACTTTCGAGGAATCAACTGGAGTGTTGAAGAAGGCTGAGAGTGAATACAAGGGGCACCGCTCATTGTTGACTCGGACCAGAAACTTACTTTCCACAATGCAACGGCAGGATGTAATGGACAGG

Coding sequence (CDS)

ATGGACAAGGTGTCAGAGGAGGTGGATCGGGTGAAAAATGAGTGGAACGATGCTTACCATAAGACTCTTGATCAGATTAAAGCAATTGAAGTATATGAGAAACAAAGTGAGTCGACGGAGAAGAATTCGCTCCCAAGATTGAATGCCCTCGCACAAGATGGATTGAATTTGCTATCTTCGTTAGAATTCAAGCTTGATCTTCTTGCGCCCCAGTTGCTCTCTGATTCCGAAGTTGAGGCTGCTCAATCATTGATTGAATCTTGGAAAAATCAATCCCACAATTTGCGATCGAGTCTGAGAAATGCAAATATGCAAGCAAAAGCCAACATGAGAAAGGCTGCTCAGGAGGAGAGAGAACGCCTTCTAGGCGGAGGAGAAGAGTCCACAATTCGCAGACGGAATTTACAAACTAAGGCTGGAATGACATCTGCTGCAGAAAGCATCACAGAGAGCCTTCGTCGCACCCGTCAACTTATGGTTCAGGAAGTGGAAAGAACCGCAAACACGATTGAGACTTTCGAGGAATCAACTGGAGTGTTGAAGAAGGCTGAGAGTGAATACAAGGGGCACCGCTCATTGTTGACTCGGACCAGAAACTTACTTTCCACAATGCAACGGCAGGATGTAATGGACAGG

Protein sequence

MDKVSEEVDRVKNEWNDAYHKTLDQIKAIEVYEKQSESTEKNSLPRLNALAQDGLNLLSSLEFKLDLLAPQLLSDSEVEAAQSLIESWKNQSHNLRSSLRNANMQAKANMRKAAQEERERLLGGGEESTIRRRNLQTKAGMTSAAESITESLRRTRQLMVQEVERTANTIETFEESTGVLKKAESEYKGHRSLLTRTRNLLSTMQRQDVMDR

Homology

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BLAST of MS022696 vs. NCBI nr
Match: XP_022157044.1 (uncharacterized protein LOC111023863 [Momordica charantia] >XP_022157045.1 uncharacterized protein LOC111023863 [Momordica charantia] >XP_022157046.1 uncharacterized protein LOC111023863 [Momordica charantia] >XP_022157047.1 uncharacterized protein LOC111023863 [Momordica charantia])

HSP 1 Score: 387.1 bits (993), Expect = 9.7e-104
Identity = 211/212 (99.53%), Postives = 212/212 (100.00%), Query Frame = 0


Query: 1   MDKVSEEVDRVKNEWNDAYHKTLDQIKAIEVYEKQSESTEKNSLPRLNALAQDGLNLLSS 60
           MDKVSEEVDRVKNEWNDAYHKTLDQIKAIEVYEKQSESTEKNSLPRLNALAQDGLNLLSS
Sbjct: 1   MDKVSEEVDRVKNEWNDAYHKTLDQIKAIEVYEKQSESTEKNSLPRLNALAQDGLNLLSS 60

Query: 61  LEFKLDLLAPQLLSDSEVEAAQSLIESWKNQSHNLRSSLRNANMQAKANMRKAAQEERER 120
           LEFKLDLLAPQLLSDSEVEAAQSLIESWKNQSHNLRSSLRNANMQAKANMRKAAQEERER
Sbjct: 61  LEFKLDLLAPQLLSDSEVEAAQSLIESWKNQSHNLRSSLRNANMQAKANMRKAAQEERER 120

Query: 121 LLGGGEESTIRRRNLQTKAGMTSAAESITESLRRTRQLMVQEVERTANTIETFEESTGVL 180
           LLGGGEESTIRRRNLQTKAGMTSAAESITESLRRTRQLMVQEVERTANTIETFEESTGVL
Sbjct: 121 LLGGGEESTIRRRNLQTKAGMTSAAESITESLRRTRQLMVQEVERTANTIETFEESTGVL 180

Query: 181 KKAESEYKGHRSLLTRTRNLLSTMQRQDVMDR 213
           KKAE+EYKGHRSLLTRTRNLLSTMQRQDVMDR
Sbjct: 181 KKAETEYKGHRSLLTRTRNLLSTMQRQDVMDR 212

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BLAST of MS022696 vs. NCBI nr
Match: XP_023513480.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111778073 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 368.2 bits (944), Expect = 4.7e-98
Identity = 200/212 (94.34%), Postives = 209/212 (98.58%), Query Frame = 0


Query: 1   MDKVSEEVDRVKNEWNDAYHKTLDQIKAIEVYEKQSESTEKNSLPRLNALAQDGLNLLSS 60
           MDKV+EEVDRVKNEWNDA+H+TLD+IKAIE Y+KQS ST+ NSLPRLNALAQDGLNLLSS
Sbjct: 1   MDKVAEEVDRVKNEWNDAFHQTLDRIKAIESYKKQSGSTDTNSLPRLNALAQDGLNLLSS 60

Query: 61  LEFKLDLLAPQLLSDSEVEAAQSLIESWKNQSHNLRSSLRNANMQAKANMRKAAQEERER 120
           LEFKLDLLAPQLLSDSEVEAAQSL+ESWKNQSHNLRSSLRNANMQAKANMRKAAQEERE+
Sbjct: 61  LEFKLDLLAPQLLSDSEVEAAQSLLESWKNQSHNLRSSLRNANMQAKANMRKAAQEEREQ 120

Query: 121 LLGGGEESTIRRRNLQTKAGMTSAAESITESLRRTRQLMVQEVERTANTIETFEESTGVL 180
           LLGGGEESTIRRRNLQTKAGMTSAAESITESLRRTRQLMVQEVERTA+TIETFEESTGVL
Sbjct: 121 LLGGGEESTIRRRNLQTKAGMTSAAESITESLRRTRQLMVQEVERTASTIETFEESTGVL 180

Query: 181 KKAESEYKGHRSLLTRTRNLLSTMQRQDVMDR 213
           KKAESEYKGHRSLLTRTRNLLSTMQRQDVMDR
Sbjct: 181 KKAESEYKGHRSLLTRTRNLLSTMQRQDVMDR 212

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BLAST of MS022696 vs. NCBI nr
Match: XP_022960516.1 (uncharacterized protein LOC111461229 [Cucurbita moschata] >KAG6592931.1 Vesicle transport protein SEC20, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 368.2 bits (944), Expect = 4.7e-98
Identity = 200/212 (94.34%), Postives = 209/212 (98.58%), Query Frame = 0


Query: 1   MDKVSEEVDRVKNEWNDAYHKTLDQIKAIEVYEKQSESTEKNSLPRLNALAQDGLNLLSS 60
           MDKV+EEVDRVKNEWNDA+H+TLD+IKAIE Y+KQS ST+ NSLPRLNALAQDGLNLLSS
Sbjct: 1   MDKVAEEVDRVKNEWNDAFHQTLDRIKAIESYKKQSGSTDTNSLPRLNALAQDGLNLLSS 60

Query: 61  LEFKLDLLAPQLLSDSEVEAAQSLIESWKNQSHNLRSSLRNANMQAKANMRKAAQEERER 120
           LEFKLDLLAPQLLSDSEVEAAQSL+ESWKNQSHNLRSSLRNANMQAKANMRKAAQEERE+
Sbjct: 61  LEFKLDLLAPQLLSDSEVEAAQSLLESWKNQSHNLRSSLRNANMQAKANMRKAAQEEREQ 120

Query: 121 LLGGGEESTIRRRNLQTKAGMTSAAESITESLRRTRQLMVQEVERTANTIETFEESTGVL 180
           LLGGGEESTIRRRNLQTKAGMTSAAESITESLRRTRQLMVQEVERTA+TIETFEESTGVL
Sbjct: 121 LLGGGEESTIRRRNLQTKAGMTSAAESITESLRRTRQLMVQEVERTASTIETFEESTGVL 180

Query: 181 KKAESEYKGHRSLLTRTRNLLSTMQRQDVMDR 213
           KKAESEYKGHRSLLTRTRNLLSTMQRQDVMDR
Sbjct: 181 KKAESEYKGHRSLLTRTRNLLSTMQRQDVMDR 212

[Close]

BLAST of MS022696 vs. NCBI nr
Match: KAG7025339.1 (Vesicle transport protein SEC20 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 367.1 bits (941), Expect = 1.0e-97
Identity = 199/212 (93.87%), Postives = 209/212 (98.58%), Query Frame = 0


Query: 1   MDKVSEEVDRVKNEWNDAYHKTLDQIKAIEVYEKQSESTEKNSLPRLNALAQDGLNLLSS 60
           MDKV+EEVDRVKNEWNDA+H+TLD+IKAIE Y+KQS ST+ NSLPRLNALAQDGLNLLSS
Sbjct: 1   MDKVAEEVDRVKNEWNDAFHQTLDRIKAIESYKKQSGSTDTNSLPRLNALAQDGLNLLSS 60

Query: 61  LEFKLDLLAPQLLSDSEVEAAQSLIESWKNQSHNLRSSLRNANMQAKANMRKAAQEERER 120
           LEFKLDLLAPQLLSDSEVEAAQSL+ESWKNQSHNLRSSLRNANMQAKANMRKAAQEERE+
Sbjct: 61  LEFKLDLLAPQLLSDSEVEAAQSLLESWKNQSHNLRSSLRNANMQAKANMRKAAQEEREQ 120

Query: 121 LLGGGEESTIRRRNLQTKAGMTSAAESITESLRRTRQLMVQEVERTANTIETFEESTGVL 180
           LLGGGEESTIRRRNLQTKAGMTSAAESITESLRRTRQLMVQEVERTA+TIETFEESTGVL
Sbjct: 121 LLGGGEESTIRRRNLQTKAGMTSAAESITESLRRTRQLMVQEVERTASTIETFEESTGVL 180

Query: 181 KKAESEYKGHRSLLTRTRNLLSTMQRQDVMDR 213
           KKAESEYKGHRSL+TRTRNLLSTMQRQDVMDR
Sbjct: 181 KKAESEYKGHRSLVTRTRNLLSTMQRQDVMDR 212

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BLAST of MS022696 vs. NCBI nr
Match: XP_038875148.1 (uncharacterized protein LOC120067685 isoform X2 [Benincasa hispida])

HSP 1 Score: 367.1 bits (941), Expect = 1.0e-97
Identity = 200/212 (94.34%), Postives = 207/212 (97.64%), Query Frame = 0


Query: 1   MDKVSEEVDRVKNEWNDAYHKTLDQIKAIEVYEKQSESTEKNSLPRLNALAQDGLNLLSS 60
           MDKV+EEVDRVKNEWN A+H TL++IKAIE YEKQSES EKNSLPRLNALAQDGLNLLSS
Sbjct: 1   MDKVAEEVDRVKNEWNHAFHHTLERIKAIEAYEKQSESMEKNSLPRLNALAQDGLNLLSS 60

Query: 61  LEFKLDLLAPQLLSDSEVEAAQSLIESWKNQSHNLRSSLRNANMQAKANMRKAAQEERER 120
           LEF LDLLAPQLLSDSEVEAAQSL++SWKNQS+NLRSSLRNANMQAKANMRKAAQEERER
Sbjct: 61  LEFNLDLLAPQLLSDSEVEAAQSLLQSWKNQSNNLRSSLRNANMQAKANMRKAAQEERER 120

Query: 121 LLGGGEESTIRRRNLQTKAGMTSAAESITESLRRTRQLMVQEVERTANTIETFEESTGVL 180
           LLGGGEESTIRRRNLQTKAGMTSAAESITESLRRTRQLMVQEVERTANTIETFEESTGVL
Sbjct: 121 LLGGGEESTIRRRNLQTKAGMTSAAESITESLRRTRQLMVQEVERTANTIETFEESTGVL 180

Query: 181 KKAESEYKGHRSLLTRTRNLLSTMQRQDVMDR 213
           KKAESEYKGHRSLLTRTRNLLSTMQRQDVMDR
Sbjct: 181 KKAESEYKGHRSLLTRTRNLLSTMQRQDVMDR 212

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BLAST of MS022696 vs. ExPASy TrEMBL
Match: A0A6J1DTI9 (uncharacterized protein LOC111023863 OS=Momordica charantia OX=3673 GN=LOC111023863 PE=4 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 4.7e-104
Identity = 211/212 (99.53%), Postives = 212/212 (100.00%), Query Frame = 0


Query: 1   MDKVSEEVDRVKNEWNDAYHKTLDQIKAIEVYEKQSESTEKNSLPRLNALAQDGLNLLSS 60
           MDKVSEEVDRVKNEWNDAYHKTLDQIKAIEVYEKQSESTEKNSLPRLNALAQDGLNLLSS
Sbjct: 1   MDKVSEEVDRVKNEWNDAYHKTLDQIKAIEVYEKQSESTEKNSLPRLNALAQDGLNLLSS 60

Query: 61  LEFKLDLLAPQLLSDSEVEAAQSLIESWKNQSHNLRSSLRNANMQAKANMRKAAQEERER 120
           LEFKLDLLAPQLLSDSEVEAAQSLIESWKNQSHNLRSSLRNANMQAKANMRKAAQEERER
Sbjct: 61  LEFKLDLLAPQLLSDSEVEAAQSLIESWKNQSHNLRSSLRNANMQAKANMRKAAQEERER 120

Query: 121 LLGGGEESTIRRRNLQTKAGMTSAAESITESLRRTRQLMVQEVERTANTIETFEESTGVL 180
           LLGGGEESTIRRRNLQTKAGMTSAAESITESLRRTRQLMVQEVERTANTIETFEESTGVL
Sbjct: 121 LLGGGEESTIRRRNLQTKAGMTSAAESITESLRRTRQLMVQEVERTANTIETFEESTGVL 180

Query: 181 KKAESEYKGHRSLLTRTRNLLSTMQRQDVMDR 213
           KKAE+EYKGHRSLLTRTRNLLSTMQRQDVMDR
Sbjct: 181 KKAETEYKGHRSLLTRTRNLLSTMQRQDVMDR 212

[Close]

BLAST of MS022696 vs. ExPASy TrEMBL
Match: A0A6J1H7T9 (uncharacterized protein LOC111461229 OS=Cucurbita moschata OX=3662 GN=LOC111461229 PE=4 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 2.3e-98
Identity = 200/212 (94.34%), Postives = 209/212 (98.58%), Query Frame = 0


Query: 1   MDKVSEEVDRVKNEWNDAYHKTLDQIKAIEVYEKQSESTEKNSLPRLNALAQDGLNLLSS 60
           MDKV+EEVDRVKNEWNDA+H+TLD+IKAIE Y+KQS ST+ NSLPRLNALAQDGLNLLSS
Sbjct: 1   MDKVAEEVDRVKNEWNDAFHQTLDRIKAIESYKKQSGSTDTNSLPRLNALAQDGLNLLSS 60

Query: 61  LEFKLDLLAPQLLSDSEVEAAQSLIESWKNQSHNLRSSLRNANMQAKANMRKAAQEERER 120
           LEFKLDLLAPQLLSDSEVEAAQSL+ESWKNQSHNLRSSLRNANMQAKANMRKAAQEERE+
Sbjct: 61  LEFKLDLLAPQLLSDSEVEAAQSLLESWKNQSHNLRSSLRNANMQAKANMRKAAQEEREQ 120

Query: 121 LLGGGEESTIRRRNLQTKAGMTSAAESITESLRRTRQLMVQEVERTANTIETFEESTGVL 180
           LLGGGEESTIRRRNLQTKAGMTSAAESITESLRRTRQLMVQEVERTA+TIETFEESTGVL
Sbjct: 121 LLGGGEESTIRRRNLQTKAGMTSAAESITESLRRTRQLMVQEVERTASTIETFEESTGVL 180

Query: 181 KKAESEYKGHRSLLTRTRNLLSTMQRQDVMDR 213
           KKAESEYKGHRSLLTRTRNLLSTMQRQDVMDR
Sbjct: 181 KKAESEYKGHRSLLTRTRNLLSTMQRQDVMDR 212

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BLAST of MS022696 vs. ExPASy TrEMBL
Match: A0A6J1KS49 (uncharacterized protein LOC111498164 OS=Cucurbita maxima OX=3661 GN=LOC111498164 PE=4 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 1.5e-97
Identity = 198/212 (93.40%), Postives = 208/212 (98.11%), Query Frame = 0


Query: 1   MDKVSEEVDRVKNEWNDAYHKTLDQIKAIEVYEKQSESTEKNSLPRLNALAQDGLNLLSS 60
           MDKV+EEVDRVKNEWNDA+H+TLD+IKAIE Y+KQS ST+ NSLPRLNALAQDGLNLLSS
Sbjct: 1   MDKVAEEVDRVKNEWNDAFHQTLDRIKAIESYKKQSGSTDTNSLPRLNALAQDGLNLLSS 60

Query: 61  LEFKLDLLAPQLLSDSEVEAAQSLIESWKNQSHNLRSSLRNANMQAKANMRKAAQEERER 120
           LEFKLDLL PQLLSDSEVEAAQSL+ESWKNQSHNLRSSLRNANMQAKANMRKAAQEERE+
Sbjct: 61  LEFKLDLLVPQLLSDSEVEAAQSLLESWKNQSHNLRSSLRNANMQAKANMRKAAQEEREQ 120

Query: 121 LLGGGEESTIRRRNLQTKAGMTSAAESITESLRRTRQLMVQEVERTANTIETFEESTGVL 180
           LLGGGEESTIRRRNLQTKAGMTSAAESITESLRRTRQLMVQEVERTA+TIETF+ESTGVL
Sbjct: 121 LLGGGEESTIRRRNLQTKAGMTSAAESITESLRRTRQLMVQEVERTASTIETFDESTGVL 180

Query: 181 KKAESEYKGHRSLLTRTRNLLSTMQRQDVMDR 213
           KKAESEYKGHRSLLTRTRNLLSTMQRQDVMDR
Sbjct: 181 KKAESEYKGHRSLLTRTRNLLSTMQRQDVMDR 212

[Close]

BLAST of MS022696 vs. ExPASy TrEMBL
Match: A0A5A7TE96 (Putative vesicle transporter Sec20 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002810 PE=4 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 1.6e-96
Identity = 197/212 (92.92%), Postives = 207/212 (97.64%), Query Frame = 0


Query: 1   MDKVSEEVDRVKNEWNDAYHKTLDQIKAIEVYEKQSESTEKNSLPRLNALAQDGLNLLSS 60
           MDKV+EEV+RVKNEWN+A+H TL++IKAIE Y+KQSES  KNSLPRLNALAQDGLNLLSS
Sbjct: 1   MDKVAEEVNRVKNEWNEAFHHTLERIKAIESYDKQSESMGKNSLPRLNALAQDGLNLLSS 60

Query: 61  LEFKLDLLAPQLLSDSEVEAAQSLIESWKNQSHNLRSSLRNANMQAKANMRKAAQEERER 120
           LEFKLDLLAPQLLSDSE+EAAQSL+ESWKNQS NLRSSLRNANMQAKANMRKAAQEERER
Sbjct: 61  LEFKLDLLAPQLLSDSEIEAAQSLLESWKNQSQNLRSSLRNANMQAKANMRKAAQEERER 120

Query: 121 LLGGGEESTIRRRNLQTKAGMTSAAESITESLRRTRQLMVQEVERTANTIETFEESTGVL 180
           LLGGGEESTIRRRNLQTKAGMTSAAESITESLRRTRQLMVQEVERTA+TIETFEESTGVL
Sbjct: 121 LLGGGEESTIRRRNLQTKAGMTSAAESITESLRRTRQLMVQEVERTASTIETFEESTGVL 180

Query: 181 KKAESEYKGHRSLLTRTRNLLSTMQRQDVMDR 213
           KKAESEYKGHRSLLTRTRNLLSTMQRQDVMDR
Sbjct: 181 KKAESEYKGHRSLLTRTRNLLSTMQRQDVMDR 212

[Close]

BLAST of MS022696 vs. ExPASy TrEMBL
Match: E5GCN4 (Vesicle transport protein SEC20 OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 1.6e-96
Identity = 197/212 (92.92%), Postives = 207/212 (97.64%), Query Frame = 0


Query: 1   MDKVSEEVDRVKNEWNDAYHKTLDQIKAIEVYEKQSESTEKNSLPRLNALAQDGLNLLSS 60
           MDKV+EEV+RVKNEWN+A+H TL++IKAIE Y+KQSES  KNSLPRLNALAQDGLNLLSS
Sbjct: 1   MDKVAEEVNRVKNEWNEAFHHTLERIKAIESYDKQSESMGKNSLPRLNALAQDGLNLLSS 60

Query: 61  LEFKLDLLAPQLLSDSEVEAAQSLIESWKNQSHNLRSSLRNANMQAKANMRKAAQEERER 120
           LEFKLDLLAPQLLSDSE+EAAQSL+ESWKNQS NLRSSLRNANMQAKANMRKAAQEERER
Sbjct: 61  LEFKLDLLAPQLLSDSEIEAAQSLLESWKNQSQNLRSSLRNANMQAKANMRKAAQEERER 120

Query: 121 LLGGGEESTIRRRNLQTKAGMTSAAESITESLRRTRQLMVQEVERTANTIETFEESTGVL 180
           LLGGGEESTIRRRNLQTKAGMTSAAESITESLRRTRQLMVQEVERTA+TIETFEESTGVL
Sbjct: 121 LLGGGEESTIRRRNLQTKAGMTSAAESITESLRRTRQLMVQEVERTASTIETFEESTGVL 180

Query: 181 KKAESEYKGHRSLLTRTRNLLSTMQRQDVMDR 213
           KKAESEYKGHRSLLTRTRNLLSTMQRQDVMDR
Sbjct: 181 KKAESEYKGHRSLLTRTRNLLSTMQRQDVMDR 212

[Close]

BLAST of MS022696 vs. TAIR 10
Match: AT3G24315.1 (Sec20 family protein )

HSP 1 Score: 264.2 bits (674), Expect = 8.8e-71
Identity = 148/215 (68.84%), Postives = 175/215 (81.40%), Query Frame = 0


Query: 1   MDKVSEEVDRVKNEWNDAYHKTLDQIKAIEVYEKQSE---STEKNSLPRLNALAQDGLNL 60
           MD+V  EV++ K EW +AY KT+  I +I+ Y K        EK SL RLN LAQDGL+L
Sbjct: 1   MDEVVVEVEKTKREWEEAYEKTIGHIISIQQYGKSRRGDGGEEKFSLQRLNGLAQDGLSL 60

Query: 61  LSSLEFKLDLLAPQLLSDSEVEAAQSLIESWKNQSHNLRSSLRNANMQAKANMRKAAQEE 120
           L+SL+F LDLLAPQL SD +V++ QSL+E+WKNQ H+LR +LR+AN+QAK NMRKAAQEE
Sbjct: 61  LNSLQFNLDLLAPQLPSDDQVQSTQSLLETWKNQYHSLRVNLRSANLQAKDNMRKAAQEE 120

Query: 121 RERLLGGGEESTIRRRNLQTKAGMTSAAESITESLRRTRQLMVQEVERTANTIETFEEST 180
           RE LLGGG EST+ RR  Q  AG+TS AESITESLRR+RQLMVQEVER+ NT+  F+EST
Sbjct: 121 RELLLGGGTESTVLRRKRQANAGVTSDAESITESLRRSRQLMVQEVERSTNTLVAFDEST 180

Query: 181 GVLKKAESEYKGHRSLLTRTRNLLSTMQRQDVMDR 213
           GVLKKAESEYKGHRSLL+RTRNLLSTMQRQDV+DR
Sbjct: 181 GVLKKAESEYKGHRSLLSRTRNLLSTMQRQDVIDR 215

The following BLAST results are available for this feature:

BLAST of MS022696 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022157044.1	9.7e-104	99.53	uncharacterized protein LOC111023863 [Momordica charantia] >XP_022157045.1 uncha...	[more]
XP_023513480.1	4.7e-98	94.34	LOW QUALITY PROTEIN: uncharacterized protein LOC111778073 [Cucurbita pepo subsp....	[more]
XP_022960516.1	4.7e-98	94.34	uncharacterized protein LOC111461229 [Cucurbita moschata] >KAG6592931.1 Vesicle ...	[more]
KAG7025339.1	1.0e-97	93.87	Vesicle transport protein SEC20 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_038875148.1	1.0e-97	94.34	uncharacterized protein LOC120067685 isoform X2 [Benincasa hispida]	[more]

BLAST of MS022696 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS022696 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DTI9	4.7e-104	99.53	uncharacterized protein LOC111023863 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1H7T9	2.3e-98	94.34	uncharacterized protein LOC111461229 OS=Cucurbita moschata OX=3662 GN=LOC1114612...	[more]
A0A6J1KS49	1.5e-97	93.40	uncharacterized protein LOC111498164 OS=Cucurbita maxima OX=3661 GN=LOC111498164...	[more]
A0A5A7TE96	1.6e-96	92.92	Putative vesicle transporter Sec20 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
E5GCN4	1.6e-96	92.92	Vesicle transport protein SEC20 OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]

BLAST of MS022696 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G24315.1	8.8e-71	68.84	Sec20 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 85..119
IPR005606	Sec20	PFAM	PF03908	Sec20	coord: 143..212 e-value: 5.1E-19 score: 68.0
IPR005606	Sec20	PANTHER	PTHR12825	BNIP1-RELATED	coord: 1..212

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS022696.1	MS022696.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006890	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
molecular_function	GO:0005484	SNAP receptor activity