MS022515 (gene) Bitter gourd (TR) v1

Overview


Name	MS022515
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	MYB transcription factor
Location	scaffold720: 218709 .. 219113 (+)
RNA-Seq Expression	MS022515
Synteny	MS022515

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGCACGGGGGGTGGTGCAGGAAAGTGAAGGTGAAGAGAGGTTTGTGGTCTCCCGAGGAAGACGAGAAGCTGGTGAATTGTATAAGGAGAAGGAGTGGTGGTGGAAATGGGCATGCTTTTTCCTGGAGTAGCGTGCCTAAATTGGCAGGGTTGGCGAGATGTGGGAAGAGCTGCCGGTTGAGGTGGATCAACTACCTGAGACCAGATCTGAAGAGGGGTAGCTTCAGCGCCGAGGAAGAGAGGACCATCGTGGACGTCCACCGGATCCTGGGGAACCGATGGGCCCAGATAGCCAAGCATCTCCCCGGCAGAACTGACAACGAGATCAAGAACTTCTGGAACTCCTGCATCAAGAAGAAGCTCATTGCCCAAGGCCTGGATCCCAATACCCACAATCTTCTC

mRNA sequence

ATGGGGCACGGGGGGTGGTGCAGGAAAGTGAAGGTGAAGAGAGGTTTGTGGTCTCCCGAGGAAGACGAGAAGCTGGTGAATTGTATAAGGAGAAGGAGTGGTGGTGGAAATGGGCATGCTTTTTCCTGGAGTAGCGTGCCTAAATTGGCAGGGTTGGCGAGATGTGGGAAGAGCTGCCGGTTGAGGTGGATCAACTACCTGAGACCAGATCTGAAGAGGGGTAGCTTCAGCGCCGAGGAAGAGAGGACCATCGTGGACGTCCACCGGATCCTGGGGAACCGATGGGCCCAGATAGCCAAGCATCTCCCCGGCAGAACTGACAACGAGATCAAGAACTTCTGGAACTCCTGCATCAAGAAGAAGCTCATTGCCCAAGGCCTGGATCCCAATACCCACAATCTTCTC

Coding sequence (CDS)

ATGGGGCACGGGGGGTGGTGCAGGAAAGTGAAGGTGAAGAGAGGTTTGTGGTCTCCCGAGGAAGACGAGAAGCTGGTGAATTGTATAAGGAGAAGGAGTGGTGGTGGAAATGGGCATGCTTTTTCCTGGAGTAGCGTGCCTAAATTGGCAGGGTTGGCGAGATGTGGGAAGAGCTGCCGGTTGAGGTGGATCAACTACCTGAGACCAGATCTGAAGAGGGGTAGCTTCAGCGCCGAGGAAGAGAGGACCATCGTGGACGTCCACCGGATCCTGGGGAACCGATGGGCCCAGATAGCCAAGCATCTCCCCGGCAGAACTGACAACGAGATCAAGAACTTCTGGAACTCCTGCATCAAGAAGAAGCTCATTGCCCAAGGCCTGGATCCCAATACCCACAATCTTCTC

Protein sequence

MGHGGWCRKVKVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAGLARCGKSCRLRWINYLRPDLKRGSFSAEEERTIVDVHRILGNRWAQIAKHLPGRTDNEIKNFWNSCIKKKLIAQGLDPNTHNLL

Homology

[Close]

BLAST of MS022515 vs. NCBI nr
Match: XP_022146666.1 (transcription factor MYB8-like [Momordica charantia])

HSP 1 Score: 297.0 bits (759), Expect = 8.4e-77
Identity = 134/135 (99.26%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 1   MGHGGWCRKVKVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAGLARCGKSCR 60
           MGHGGWCRKVKVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAGLARCGKSCR
Sbjct: 1   MGHGGWCRKVKVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAGLARCGKSCR 60

Query: 61  LRWINYLRPDLKRGSFSAEEERTIVDVHRILGNRWAQIAKHLPGRTDNEIKNFWNSCIKK 120
           LRWINYLRPDLKRGSFSAEEERTIVDVHRILGNRWAQIAKHLPGRTDNEIKNFWNSCIKK
Sbjct: 61  LRWINYLRPDLKRGSFSAEEERTIVDVHRILGNRWAQIAKHLPGRTDNEIKNFWNSCIKK 120

Query: 121 KLIAQGLDPNTHNLL 136
           KL+AQGLDPNTHNLL
Sbjct: 121 KLLAQGLDPNTHNLL 135

[Close]

BLAST of MS022515 vs. NCBI nr
Match: XP_023518177.1 (transcription factor MYB20-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 236.9 bits (603), Expect = 1.0e-58
Identity = 110/135 (81.48%), Postives = 115/135 (85.19%), Query Frame = 0


Query: 1   MGHGGWCRKVKVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAGLARCGKSCR 60
           MGH   C KVKVKRGLWSPEEDEKL+ CIR+  G        WS VPK+AGL RCGKSCR
Sbjct: 1   MGHHSCCTKVKVKRGLWSPEEDEKLIKCIRKIEGQA-----CWSRVPKMAGLDRCGKSCR 60

Query: 61  LRWINYLRPDLKRGSFSAEEERTIVDVHRILGNRWAQIAKHLPGRTDNEIKNFWNSCIKK 120
           LRWINYLRPDLKRG FSAEEERTI+DVHRILGNRWAQIAKHLPGRTDNEIKNFWNS IKK
Sbjct: 61  LRWINYLRPDLKRGCFSAEEERTIIDVHRILGNRWAQIAKHLPGRTDNEIKNFWNSSIKK 120

Query: 121 KLIAQGLDPNTHNLL 136
           KL+A GLDPNTHNLL
Sbjct: 121 KLLALGLDPNTHNLL 130

[Close]

BLAST of MS022515 vs. NCBI nr
Match: KAG6594374.1 (Transcription factor MYB61, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 236.9 bits (603), Expect = 1.0e-58
Identity = 110/135 (81.48%), Postives = 115/135 (85.19%), Query Frame = 0


Query: 1   MGHGGWCRKVKVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAGLARCGKSCR 60
           MGH   C KVKVKRGLWSPEEDEKL+ CIR+  G        WS VPK+AGL RCGKSCR
Sbjct: 1   MGHHSCCTKVKVKRGLWSPEEDEKLIKCIRKIEGQA-----CWSRVPKMAGLDRCGKSCR 60

Query: 61  LRWINYLRPDLKRGSFSAEEERTIVDVHRILGNRWAQIAKHLPGRTDNEIKNFWNSCIKK 120
           LRWINYLRPDLKRG FSAEEERTI+DVHRILGNRWAQIAKHLPGRTDNEIKNFWNS IKK
Sbjct: 61  LRWINYLRPDLKRGCFSAEEERTIIDVHRILGNRWAQIAKHLPGRTDNEIKNFWNSSIKK 120

Query: 121 KLIAQGLDPNTHNLL 136
           KL+A GLDPNTHNLL
Sbjct: 121 KLLALGLDPNTHNLL 130

[Close]

BLAST of MS022515 vs. NCBI nr
Match: XP_023900538.1 (transcription factor MYB86-like isoform X1 [Quercus suber])

HSP 1 Score: 236.1 bits (601), Expect = 1.8e-58
Identity = 113/135 (83.70%), Postives = 118/135 (87.41%), Query Frame = 0


Query: 1   MGHGGWCRKVKVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAGLARCGKSCR 60
           MGH   C K KVKRGLWSPEEDEKLVN I       +GH  SWSSVPKLAGL RCGKSCR
Sbjct: 1   MGH-HCCSKQKVKRGLWSPEEDEKLVNYITT-----HGHG-SWSSVPKLAGLQRCGKSCR 60

Query: 61  LRWINYLRPDLKRGSFSAEEERTIVDVHRILGNRWAQIAKHLPGRTDNEIKNFWNSCIKK 120
           LRWINYLRPDLKRGSFSA+EER I+DVHRILGNRWAQIAKHLPGRTDNE+KNFWNSCIKK
Sbjct: 61  LRWINYLRPDLKRGSFSAQEERIIIDVHRILGNRWAQIAKHLPGRTDNEVKNFWNSCIKK 120

Query: 121 KLIAQGLDPNTHNLL 136
           KL+AQGLDPNTHNLL
Sbjct: 121 KLLAQGLDPNTHNLL 128

[Close]

BLAST of MS022515 vs. NCBI nr
Match: XP_022926820.1 (protein ODORANT1-like [Cucurbita moschata])

HSP 1 Score: 236.1 bits (601), Expect = 1.8e-58
Identity = 110/135 (81.48%), Postives = 115/135 (85.19%), Query Frame = 0


Query: 1   MGHGGWCRKVKVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAGLARCGKSCR 60
           MGH   C KVKVKRGLWSPEEDEKL+ CIR+  G        WS VPK+AGL RCGKSCR
Sbjct: 1   MGHHSCCTKVKVKRGLWSPEEDEKLMKCIRKIEGQA-----CWSRVPKMAGLDRCGKSCR 60

Query: 61  LRWINYLRPDLKRGSFSAEEERTIVDVHRILGNRWAQIAKHLPGRTDNEIKNFWNSCIKK 120
           LRWINYLRPDLKRG FSAEEERTI+DVHRILGNRWAQIAKHLPGRTDNEIKNFWNS IKK
Sbjct: 61  LRWINYLRPDLKRGCFSAEEERTIIDVHRILGNRWAQIAKHLPGRTDNEIKNFWNSSIKK 120

Query: 121 KLIAQGLDPNTHNLL 136
           KL+A GLDPNTHNLL
Sbjct: 121 KLLALGLDPNTHNLL 130

[Close]

BLAST of MS022515 vs. ExPASy Swiss-Prot
Match: Q8LPH6 (Transcription factor MYB86 OS=Arabidopsis thaliana OX=3702 GN=MYB86 PE=2 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 1.8e-50
Identity = 92/135 (68.15%), Postives = 106/135 (78.52%), Query Frame = 0


Query: 1   MGHGGWCRKVKVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAGLARCGKSCR 60
           MG    C K K+++GLWSPEEDEKL+N I R     +GH   WSSVPKLAGL RCGKSCR
Sbjct: 1   MGRHSCCFKQKLRKGLWSPEEDEKLLNYITR-----HGHG-CWSSVPKLAGLQRCGKSCR 60

Query: 61  LRWINYLRPDLKRGSFSAEEERTIVDVHRILGNRWAQIAKHLPGRTDNEIKNFWNSCIKK 120
           LRWINYLRPDLKRG+FS +EE  I+++H  LGNRW+QIA  LPGRTDNEIKNFWNSC+KK
Sbjct: 61  LRWINYLRPDLKRGAFSQDEESLIIELHAALGNRWSQIATRLPGRTDNEIKNFWNSCLKK 120

Query: 121 KLIAQGLDPNTHNLL 136
           KL  +G+DP TH  L
Sbjct: 121 KLRRKGIDPTTHKPL 129

[Close]

BLAST of MS022515 vs. ExPASy Swiss-Prot
Match: Q8VZQ2 (Transcription factor MYB61 OS=Arabidopsis thaliana OX=3702 GN=MYB61 PE=2 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 3.5e-49
Identity = 91/132 (68.94%), Postives = 103/132 (78.03%), Query Frame = 0


Query: 1   MGHGGWCRKVKVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAGLARCGKSCR 60
           MG    C K K+++GLWSPEEDEKL+  I       +GH   WSSVPKLAGL RCGKSCR
Sbjct: 1   MGRHSCCYKQKLRKGLWSPEEDEKLLTHIT-----NHGHG-CWSSVPKLAGLQRCGKSCR 60

Query: 61  LRWINYLRPDLKRGSFSAEEERTIVDVHRILGNRWAQIAKHLPGRTDNEIKNFWNSCIKK 120
           LRWINYLRPDLKRG+FS EEE  IV++H +LGNRW+QIA  LPGRTDNEIKN WNS IKK
Sbjct: 61  LRWINYLRPDLKRGAFSPEEENLIVELHAVLGNRWSQIASRLPGRTDNEIKNLWNSSIKK 120

Query: 121 KLIAQGLDPNTH 133
           KL  +G+DPNTH
Sbjct: 121 KLKQRGIDPNTH 126

[Close]

BLAST of MS022515 vs. ExPASy Swiss-Prot
Match: P20027 (Myb-related protein Hv33 OS=Hordeum vulgare OX=4513 GN=MYB2 PE=2 SV=3)

HSP 1 Score: 192.6 bits (488), Expect = 2.9e-48
Identity = 90/122 (73.77%), Postives = 98/122 (80.33%), Query Frame = 0


Query: 11  KVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAGLARCGKSCRLRWINYLRPD 70
           KV++GLWSPEEDEKL N I R   G       WSSVP+LA L RCGKSCRLRWINYLRPD
Sbjct: 13  KVRKGLWSPEEDEKLYNHIIRHGVG------CWSSVPRLAALNRCGKSCRLRWINYLRPD 72

Query: 71  LKRGSFSAEEERTIVDVHRILGNRWAQIAKHLPGRTDNEIKNFWNSCIKKKLIAQGLDPN 130
           LKRG FS +EE  IV +H+ILGNRW+QIA HLPGRTDNEIKNFWNSCIKKKL  QG+DP 
Sbjct: 73  LKRGCFSQQEEDHIVALHQILGNRWSQIASHLPGRTDNEIKNFWNSCIKKKLRQQGIDPA 128

Query: 131 TH 133
           TH
Sbjct: 133 TH 128

[Close]

BLAST of MS022515 vs. ExPASy Swiss-Prot
Match: Q9SPG3 (Transcription factor MYB26 OS=Arabidopsis thaliana OX=3702 GN=MYB26 PE=2 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 9.4e-47
Identity = 93/144 (64.58%), Postives = 103/144 (71.53%), Query Frame = 0


Query: 1   MGHGGWCRKVKVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAG--------- 60
           MGH   C K KVKRGLWSPEEDEKL+N I        GH   WSSVPK AG         
Sbjct: 1   MGHHSCCNKQKVKRGLWSPEEDEKLINYI-----NSYGHG-CWSSVPKHAGTYTHIHGFC 60

Query: 61  LARCGKSCRLRWINYLRPDLKRGSFSAEEERTIVDVHRILGNRWAQIAKHLPGRTDNEIK 120
           L RCGKSCRLRWINYLRPDLKRGSFS +E   I+++H ILGNRWAQIAKHLPGRTDNE+K
Sbjct: 61  LQRCGKSCRLRWINYLRPDLKRGSFSPQEAALIIELHSILGNRWAQIAKHLPGRTDNEVK 120

Query: 121 NFWNSCIKKKLIAQGLDPNTHNLL 136
           NFWNS IKKKL++     + H+ L
Sbjct: 121 NFWNSSIKKKLMSHHHHGHHHHHL 138

[Close]

BLAST of MS022515 vs. ExPASy Swiss-Prot
Match: Q9FJP2 (Transcription factor MYB53 OS=Arabidopsis thaliana OX=3702 GN=MYB53 PE=1 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 4.7e-46
Identity = 83/132 (62.88%), Postives = 102/132 (77.27%), Query Frame = 0


Query: 1   MGHGGWCRKVKVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAGLARCGKSCR 60
           MG      +  +K+G W PEED+KL+N I +     +GH+ SWS++PKLAGL RCGKSCR
Sbjct: 1   MGRSPSSDETGLKKGPWLPEEDDKLINYIHK-----HGHS-SWSALPKLAGLNRCGKSCR 60

Query: 61  LRWINYLRPDLKRGSFSAEEERTIVDVHRILGNRWAQIAKHLPGRTDNEIKNFWNSCIKK 120
           LRW NYLRPD+KRG FSAEEE TI+++H +LGN+W+ IA HLPGRTDNEIKNFWN+ +KK
Sbjct: 61  LRWTNYLRPDIKRGKFSAEEEETILNLHAVLGNKWSMIASHLPGRTDNEIKNFWNTHLKK 120

Query: 121 KLIAQGLDPNTH 133
           KLI  G DP TH
Sbjct: 121 KLIQMGFDPMTH 126

[Close]

BLAST of MS022515 vs. ExPASy TrEMBL
Match: A0A6J1D018 (transcription factor MYB8-like OS=Momordica charantia OX=3673 GN=LOC111015816 PE=4 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 4.1e-77
Identity = 134/135 (99.26%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 1   MGHGGWCRKVKVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAGLARCGKSCR 60
           MGHGGWCRKVKVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAGLARCGKSCR
Sbjct: 1   MGHGGWCRKVKVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAGLARCGKSCR 60

Query: 61  LRWINYLRPDLKRGSFSAEEERTIVDVHRILGNRWAQIAKHLPGRTDNEIKNFWNSCIKK 120
           LRWINYLRPDLKRGSFSAEEERTIVDVHRILGNRWAQIAKHLPGRTDNEIKNFWNSCIKK
Sbjct: 61  LRWINYLRPDLKRGSFSAEEERTIVDVHRILGNRWAQIAKHLPGRTDNEIKNFWNSCIKK 120

Query: 121 KLIAQGLDPNTHNLL 136
           KL+AQGLDPNTHNLL
Sbjct: 121 KLLAQGLDPNTHNLL 135

[Close]

BLAST of MS022515 vs. ExPASy TrEMBL
Match: A0A6J1KS24 (transcription factor MYB13-like OS=Cucurbita maxima OX=3661 GN=LOC111497119 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 8.5e-59
Identity = 110/135 (81.48%), Postives = 115/135 (85.19%), Query Frame = 0


Query: 1   MGHGGWCRKVKVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAGLARCGKSCR 60
           MGH   C KVKVKRGLWSPEEDEKL+ CIR+  G        WS VPK+AGL RCGKSCR
Sbjct: 1   MGHHSCCTKVKVKRGLWSPEEDEKLMKCIRKIEGQA-----CWSRVPKMAGLDRCGKSCR 60

Query: 61  LRWINYLRPDLKRGSFSAEEERTIVDVHRILGNRWAQIAKHLPGRTDNEIKNFWNSCIKK 120
           LRWINYLRPDLKRG FSAEEERTI+DVHRILGNRWAQIAKHLPGRTDNEIKNFWNS IKK
Sbjct: 61  LRWINYLRPDLKRGCFSAEEERTIIDVHRILGNRWAQIAKHLPGRTDNEIKNFWNSSIKK 120

Query: 121 KLIAQGLDPNTHNLL 136
           KL+A GLDPNTHNLL
Sbjct: 121 KLLALGLDPNTHNLL 130

[Close]

BLAST of MS022515 vs. ExPASy TrEMBL
Match: A0A6J1EM66 (protein ODORANT1-like OS=Cucurbita moschata OX=3662 GN=LOC111433821 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 8.5e-59
Identity = 110/135 (81.48%), Postives = 115/135 (85.19%), Query Frame = 0


Query: 1   MGHGGWCRKVKVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAGLARCGKSCR 60
           MGH   C KVKVKRGLWSPEEDEKL+ CIR+  G        WS VPK+AGL RCGKSCR
Sbjct: 1   MGHHSCCTKVKVKRGLWSPEEDEKLMKCIRKIEGQA-----CWSRVPKMAGLDRCGKSCR 60

Query: 61  LRWINYLRPDLKRGSFSAEEERTIVDVHRILGNRWAQIAKHLPGRTDNEIKNFWNSCIKK 120
           LRWINYLRPDLKRG FSAEEERTI+DVHRILGNRWAQIAKHLPGRTDNEIKNFWNS IKK
Sbjct: 61  LRWINYLRPDLKRGCFSAEEERTIIDVHRILGNRWAQIAKHLPGRTDNEIKNFWNSSIKK 120

Query: 121 KLIAQGLDPNTHNLL 136
           KL+A GLDPNTHNLL
Sbjct: 121 KLLALGLDPNTHNLL 130

[Close]

BLAST of MS022515 vs. ExPASy TrEMBL
Match: A0A7N2MVY0 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 1.9e-58
Identity = 112/135 (82.96%), Postives = 118/135 (87.41%), Query Frame = 0


Query: 1   MGHGGWCRKVKVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAGLARCGKSCR 60
           MGH   C K KVKRGLWSPEEDEKLVN I       +GH  SWSSVPKLAGL RCGKSCR
Sbjct: 1   MGH-HCCSKQKVKRGLWSPEEDEKLVNYITT-----HGHG-SWSSVPKLAGLQRCGKSCR 60

Query: 61  LRWINYLRPDLKRGSFSAEEERTIVDVHRILGNRWAQIAKHLPGRTDNEIKNFWNSCIKK 120
           LRWINYLRPDLKRGSFS++EER I+DVHRILGNRWAQIAKHLPGRTDNE+KNFWNSCIKK
Sbjct: 61  LRWINYLRPDLKRGSFSSQEERIIIDVHRILGNRWAQIAKHLPGRTDNEVKNFWNSCIKK 120

Query: 121 KLIAQGLDPNTHNLL 136
           KL+AQGLDPNTHNLL
Sbjct: 121 KLLAQGLDPNTHNLL 128

[Close]

BLAST of MS022515 vs. ExPASy TrEMBL
Match: A0A6P8D1R8 (transcription factor MYB8-like OS=Punica granatum OX=22663 GN=LOC116202856 PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 4.2e-58
Identity = 111/135 (82.22%), Postives = 118/135 (87.41%), Query Frame = 0


Query: 1   MGHGGWCRKVKVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAGLARCGKSCR 60
           MGH   C K KVKRGLWSPEEDEKL+  I       +GH  SWSSVPKLAGL RCGKSCR
Sbjct: 1   MGH-QCCSKQKVKRGLWSPEEDEKLIRHITT-----HGHG-SWSSVPKLAGLQRCGKSCR 60

Query: 61  LRWINYLRPDLKRGSFSAEEERTIVDVHRILGNRWAQIAKHLPGRTDNEIKNFWNSCIKK 120
           LRWINYLRPDLKRGSF+A+EERTI+DVHRILGNRW+QIAKHLPGRTDNE+KNFWNSCIKK
Sbjct: 61  LRWINYLRPDLKRGSFTAQEERTIIDVHRILGNRWSQIAKHLPGRTDNEVKNFWNSCIKK 120

Query: 121 KLIAQGLDPNTHNLL 136
           KLIAQGLDPNTHNLL
Sbjct: 121 KLIAQGLDPNTHNLL 128

[Close]

BLAST of MS022515 vs. TAIR 10
Match: AT3G12720.1 (myb domain protein 67 )

HSP 1 Score: 221.9 bits (564), Expect = 3.2e-58
Identity = 104/135 (77.04%), Postives = 116/135 (85.93%), Query Frame = 0


Query: 1   MGHGGWCRKVKVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAGLARCGKSCR 60
           MGH   C K KVKRGLWSPEEDEKL+  I       +GH  SWSSVPKLAGL RCGKSCR
Sbjct: 12  MGH-RCCGKHKVKRGLWSPEEDEKLLRYITT-----HGHP-SWSSVPKLAGLQRCGKSCR 71

Query: 61  LRWINYLRPDLKRGSFSAEEERTIVDVHRILGNRWAQIAKHLPGRTDNEIKNFWNSCIKK 120
           LRWINYLRPDL+RGSF+ EEE+ I+DVHRILGN+WAQIAKHLPGRTDNE+KNFWNSCIKK
Sbjct: 72  LRWINYLRPDLRRGSFNEEEEQIIIDVHRILGNKWAQIAKHLPGRTDNEVKNFWNSCIKK 131

Query: 121 KLIAQGLDPNTHNLL 136
           KL++QGLDP+THNL+
Sbjct: 132 KLLSQGLDPSTHNLM 139

[Close]

BLAST of MS022515 vs. TAIR 10
Match: AT5G26660.1 (myb domain protein 86 )

HSP 1 Score: 199.9 bits (507), Expect = 1.3e-51
Identity = 92/135 (68.15%), Postives = 106/135 (78.52%), Query Frame = 0


Query: 1   MGHGGWCRKVKVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAGLARCGKSCR 60
           MG    C K K+++GLWSPEEDEKL+N I R     +GH   WSSVPKLAGL RCGKSCR
Sbjct: 1   MGRHSCCFKQKLRKGLWSPEEDEKLLNYITR-----HGHG-CWSSVPKLAGLQRCGKSCR 60

Query: 61  LRWINYLRPDLKRGSFSAEEERTIVDVHRILGNRWAQIAKHLPGRTDNEIKNFWNSCIKK 120
           LRWINYLRPDLKRG+FS +EE  I+++H  LGNRW+QIA  LPGRTDNEIKNFWNSC+KK
Sbjct: 61  LRWINYLRPDLKRGAFSQDEESLIIELHAALGNRWSQIATRLPGRTDNEIKNFWNSCLKK 120

Query: 121 KLIAQGLDPNTHNLL 136
           KL  +G+DP TH  L
Sbjct: 121 KLRRKGIDPTTHKPL 129

[Close]

BLAST of MS022515 vs. TAIR 10
Match: AT1G57560.1 (myb domain protein 50 )

HSP 1 Score: 198.4 bits (503), Expect = 3.8e-51
Identity = 90/129 (69.77%), Postives = 106/129 (82.17%), Query Frame = 0


Query: 7   CRKVKVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAGLARCGKSCRLRWINY 66
           C K K+++GLWSPEEDEKL+N I +     +GH   WSSVPKLAGL RCGKSCRLRWINY
Sbjct: 7   CYKQKLRKGLWSPEEDEKLLNYITK-----HGHG-CWSSVPKLAGLERCGKSCRLRWINY 66

Query: 67  LRPDLKRGSFSAEEERTIVDVHRILGNRWAQIAKHLPGRTDNEIKNFWNSCIKKKLIAQG 126
           LRPDLKRG+FS+EE+  IV++H +LGNRW+QIA  LPGRTDNEIKN WNSCIKKKL+ +G
Sbjct: 67  LRPDLKRGAFSSEEQNLIVELHAVLGNRWSQIAARLPGRTDNEIKNLWNSCIKKKLMKKG 126

Query: 127 LDPNTHNLL 136
           +DP TH  L
Sbjct: 127 IDPITHKPL 129

[Close]

BLAST of MS022515 vs. TAIR 10
Match: AT1G09540.1 (myb domain protein 61 )

HSP 1 Score: 195.7 bits (496), Expect = 2.5e-50
Identity = 91/132 (68.94%), Postives = 103/132 (78.03%), Query Frame = 0


Query: 1   MGHGGWCRKVKVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAGLARCGKSCR 60
           MG    C K K+++GLWSPEEDEKL+  I       +GH   WSSVPKLAGL RCGKSCR
Sbjct: 1   MGRHSCCYKQKLRKGLWSPEEDEKLLTHIT-----NHGHG-CWSSVPKLAGLQRCGKSCR 60

Query: 61  LRWINYLRPDLKRGSFSAEEERTIVDVHRILGNRWAQIAKHLPGRTDNEIKNFWNSCIKK 120
           LRWINYLRPDLKRG+FS EEE  IV++H +LGNRW+QIA  LPGRTDNEIKN WNS IKK
Sbjct: 61  LRWINYLRPDLKRGAFSPEEENLIVELHAVLGNRWSQIASRLPGRTDNEIKNLWNSSIKK 120

Query: 121 KLIAQGLDPNTH 133
           KL  +G+DPNTH
Sbjct: 121 KLKQRGIDPNTH 126

[Close]

BLAST of MS022515 vs. TAIR 10
Match: AT3G13890.2 (myb domain protein 26 )

HSP 1 Score: 195.3 bits (495), Expect = 3.2e-50
Identity = 93/135 (68.89%), Postives = 103/135 (76.30%), Query Frame = 0


Query: 1   MGHGGWCRKVKVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAGLARCGKSCR 60
           MGH   C K KVKRGLWSPEEDEKL+N I        GH   WSSVPK AGL RCGKSCR
Sbjct: 1   MGHHSCCNKQKVKRGLWSPEEDEKLINYI-----NSYGHG-CWSSVPKHAGLQRCGKSCR 60

Query: 61  LRWINYLRPDLKRGSFSAEEERTIVDVHRILGNRWAQIAKHLPGRTDNEIKNFWNSCIKK 120
           LRWINYLRPDLKRGSFS +E   I+++H ILGNRWAQIAKHLPGRTDNE+KNFWNS IKK
Sbjct: 61  LRWINYLRPDLKRGSFSPQEAALIIELHSILGNRWAQIAKHLPGRTDNEVKNFWNSSIKK 120

Query: 121 KLIAQGLDPNTHNLL 136
           KL++     + H+ L
Sbjct: 121 KLMSHHHHGHHHHHL 129

The following BLAST results are available for this feature:

BLAST of MS022515 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022146666.1	8.4e-77	99.26	transcription factor MYB8-like [Momordica charantia]	[more]
XP_023518177.1	1.0e-58	81.48	transcription factor MYB20-like [Cucurbita pepo subsp. pepo]	[more]
KAG6594374.1	1.0e-58	81.48	Transcription factor MYB61, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023900538.1	1.8e-58	83.70	transcription factor MYB86-like isoform X1 [Quercus suber]	[more]
XP_022926820.1	1.8e-58	81.48	protein ODORANT1-like [Cucurbita moschata]	[more]

BLAST of MS022515 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LPH6	1.8e-50	68.15	Transcription factor MYB86 OS=Arabidopsis thaliana OX=3702 GN=MYB86 PE=2 SV=1	[more]
Q8VZQ2	3.5e-49	68.94	Transcription factor MYB61 OS=Arabidopsis thaliana OX=3702 GN=MYB61 PE=2 SV=1	[more]
P20027	2.9e-48	73.77	Myb-related protein Hv33 OS=Hordeum vulgare OX=4513 GN=MYB2 PE=2 SV=3	[more]
Q9SPG3	9.4e-47	64.58	Transcription factor MYB26 OS=Arabidopsis thaliana OX=3702 GN=MYB26 PE=2 SV=1	[more]
Q9FJP2	4.7e-46	62.88	Transcription factor MYB53 OS=Arabidopsis thaliana OX=3702 GN=MYB53 PE=1 SV=1	[more]

BLAST of MS022515 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D018	4.1e-77	99.26	transcription factor MYB8-like OS=Momordica charantia OX=3673 GN=LOC111015816 PE...	[more]
A0A6J1KS24	8.5e-59	81.48	transcription factor MYB13-like OS=Cucurbita maxima OX=3661 GN=LOC111497119 PE=4...	[more]
A0A6J1EM66	8.5e-59	81.48	protein ODORANT1-like OS=Cucurbita moschata OX=3662 GN=LOC111433821 PE=4 SV=1	[more]
A0A7N2MVY0	1.9e-58	82.96	Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1	[more]
A0A6P8D1R8	4.2e-58	82.22	transcription factor MYB8-like OS=Punica granatum OX=22663 GN=LOC116202856 PE=4 ...	[more]

BLAST of MS022515 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12720.1	3.2e-58	77.04	myb domain protein 67	[more]
AT5G26660.1	1.3e-51	68.15	myb domain protein 86	[more]
AT1G57560.1	3.8e-51	69.77	myb domain protein 50	[more]
AT1G09540.1	2.5e-50	68.94	myb domain protein 61	[more]
AT3G13890.2	3.2e-50	68.89	myb domain protein 26	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 13..69 e-value: 1.5E-5 score: 34.5 coord: 72..120 e-value: 1.1E-15 score: 68.1
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 9..67 score: 9.97646
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 68..118 score: 10.359669
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 17..67 e-value: 3.13104E-6 score: 39.8662
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 75..115 e-value: 3.62924E-11 score: 52.5778
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 14..67 e-value: 8.0E-12 score: 45.2 coord: 73..116 e-value: 1.6E-15 score: 57.0
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 9..67 score: 14.200234
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 68..122 score: 25.952282
None	No IPR available	GENE3D	1.10.10.60		coord: 75..122 e-value: 2.4E-20 score: 74.2
None	No IPR available	GENE3D	1.10.10.60		coord: 11..73 e-value: 4.7E-16 score: 60.5
None	No IPR available	PANTHER	PTHR47997	MYB DOMAIN PROTEIN 55	coord: 6..135
None	No IPR available	PANTHER	PTHR47997:SF16	BNAC05G40480D PROTEIN	coord: 6..135
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 11..114

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS022515.1	MS022515.1	mRNA