MS022511 (gene) Bitter gourd (TR) v1

Overview


Name	MS022511
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Pentatricopeptide repeat-containing protein
Location	scaffold720: 147849 .. 149042 (-)
RNA-Seq Expression	MS022511
Synteny	MS022511

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGCCAAACACACTCACCTATAATTTGATTATTAAGGCACTCTGTAAGTTAGGACAGATAGAGAGAGCTATTGAGACTTTCAGAGAAATGCCACTCAAGAGCTGCAATCCTGACGTTTTTACTTATAGTACATTAATGGATGGGTTGTGTAAGGAGAGGAGAATAGACGAGGCAGTGTTTCTGCTGGATGAGATGCAAATAGAAGGCTGCCTTCCAAATCCAGTGACATTTAATGTGTTGATTGATGCAATATGCAAGAATGGTGACTTGAGTCGTGCAGCAAAGCTTTTGGATAATATGTTTCTCAAAGGTTGTGTTCCAAACGAAGTGACTTATAATACCCTTATCCACGGTTTGTGCTTAAAGGGCAAGTTTGACAAAGCTCTCAGTCTTTTGGATAAAATGGTGTCGAGTAAATGTGTTCCTAATGAAGTCACTTATGGAATAATCATTAACGGTCTTGTTAAACAAGGAAGAGCTGAAGATGGAGCTCAGATTTTGGTGTCTATGGAGGAAAGAGGGCATAAAGCTAATGAGTATATTTACTCGTCCCTCATAAGTGGTTTGTTTAAGGAGGGAAAGTCTGAAGATGCTGTGAGGTTGTGGAAAGAAATGAGTGAGAAGGGATGCAAACCCAACGTTGTTGTTTATGGTGCCTTTATAGATGGTCTATGTCGAGAAGGAAGGCCGGATGAAGCCAAAGAAATTTTGGATGAGATGTTAATTAATGGTTGTTTACCAAATGCCTTCACTTACAGCACCTTAATGAATGGTTTCTTTAAGAAAGGTGACAGCCAGAAAGCAATTCTTGTGTGGAAAGAGACGATGAATCAAGATAGTAGGCACAACGAAGTTTGTTGCAGTGTCCTACTTAATGGCCTGTGTGAGGATGGAAAAATAAGGGAGGCCTTGATAGTATGGAAGCACATGCTCAGCGAAGGACTTAAACCTGATGTTGTAGCTTATAGCTCAATGATTAAAGGCCTTTGTGATGCTGGCTATGTAGACCAGGGCTTGAAGCTTTTCTATGAGATGCAATGTCAGGAGCCCAAATCCCAACCAGATGTGATAACCTATAATATTATTTTCAATGCCCTTTGTAAGGAGGGTAATCTCACCCGTGCCATCGATCTTCTAAACGGTATGCTGGATAGAGGTTGTGATCCTGACCTAGCTACATGCAATATCTTTTTG

mRNA sequence

CAGCCAAACACACTCACCTATAATTTGATTATTAAGGCACTCTGTAAGTTAGGACAGATAGAGAGAGCTATTGAGACTTTCAGAGAAATGCCACTCAAGAGCTGCAATCCTGACGTTTTTACTTATAGTACATTAATGGATGGGTTGTGTAAGGAGAGGAGAATAGACGAGGCAGTGTTTCTGCTGGATGAGATGCAAATAGAAGGCTGCCTTCCAAATCCAGTGACATTTAATGTGTTGATTGATGCAATATGCAAGAATGGTGACTTGAGTCGTGCAGCAAAGCTTTTGGATAATATGTTTCTCAAAGGTTGTGTTCCAAACGAAGTGACTTATAATACCCTTATCCACGGTTTGTGCTTAAAGGGCAAGTTTGACAAAGCTCTCAGTCTTTTGGATAAAATGGTGTCGAGTAAATGTGTTCCTAATGAAGTCACTTATGGAATAATCATTAACGGTCTTGTTAAACAAGGAAGAGCTGAAGATGGAGCTCAGATTTTGGTGTCTATGGAGGAAAGAGGGCATAAAGCTAATGAGTATATTTACTCGTCCCTCATAAGTGGTTTGTTTAAGGAGGGAAAGTCTGAAGATGCTGTGAGGTTGTGGAAAGAAATGAGTGAGAAGGGATGCAAACCCAACGTTGTTGTTTATGGTGCCTTTATAGATGGTCTATGTCGAGAAGGAAGGCCGGATGAAGCCAAAGAAATTTTGGATGAGATGTTAATTAATGGTTGTTTACCAAATGCCTTCACTTACAGCACCTTAATGAATGGTTTCTTTAAGAAAGGTGACAGCCAGAAAGCAATTCTTGTGTGGAAAGAGACGATGAATCAAGATAGTAGGCACAACGAAGTTTGTTGCAGTGTCCTACTTAATGGCCTGTGTGAGGATGGAAAAATAAGGGAGGCCTTGATAGTATGGAAGCACATGCTCAGCGAAGGACTTAAACCTGATGTTGTAGCTTATAGCTCAATGATTAAAGGCCTTTGTGATGCTGGCTATGTAGACCAGGGCTTGAAGCTTTTCTATGAGATGCAATGTCAGGAGCCCAAATCCCAACCAGATGTGATAACCTATAATATTATTTTCAATGCCCTTTGTAAGGAGGGTAATCTCACCCGTGCCATCGATCTTCTAAACGGTATGCTGGATAGAGGTTGTGATCCTGACCTAGCTACATGCAATATCTTTTTG

Coding sequence (CDS)

CAGCCAAACACACTCACCTATAATTTGATTATTAAGGCACTCTGTAAGTTAGGACAGATAGAGAGAGCTATTGAGACTTTCAGAGAAATGCCACTCAAGAGCTGCAATCCTGACGTTTTTACTTATAGTACATTAATGGATGGGTTGTGTAAGGAGAGGAGAATAGACGAGGCAGTGTTTCTGCTGGATGAGATGCAAATAGAAGGCTGCCTTCCAAATCCAGTGACATTTAATGTGTTGATTGATGCAATATGCAAGAATGGTGACTTGAGTCGTGCAGCAAAGCTTTTGGATAATATGTTTCTCAAAGGTTGTGTTCCAAACGAAGTGACTTATAATACCCTTATCCACGGTTTGTGCTTAAAGGGCAAGTTTGACAAAGCTCTCAGTCTTTTGGATAAAATGGTGTCGAGTAAATGTGTTCCTAATGAAGTCACTTATGGAATAATCATTAACGGTCTTGTTAAACAAGGAAGAGCTGAAGATGGAGCTCAGATTTTGGTGTCTATGGAGGAAAGAGGGCATAAAGCTAATGAGTATATTTACTCGTCCCTCATAAGTGGTTTGTTTAAGGAGGGAAAGTCTGAAGATGCTGTGAGGTTGTGGAAAGAAATGAGTGAGAAGGGATGCAAACCCAACGTTGTTGTTTATGGTGCCTTTATAGATGGTCTATGTCGAGAAGGAAGGCCGGATGAAGCCAAAGAAATTTTGGATGAGATGTTAATTAATGGTTGTTTACCAAATGCCTTCACTTACAGCACCTTAATGAATGGTTTCTTTAAGAAAGGTGACAGCCAGAAAGCAATTCTTGTGTGGAAAGAGACGATGAATCAAGATAGTAGGCACAACGAAGTTTGTTGCAGTGTCCTACTTAATGGCCTGTGTGAGGATGGAAAAATAAGGGAGGCCTTGATAGTATGGAAGCACATGCTCAGCGAAGGACTTAAACCTGATGTTGTAGCTTATAGCTCAATGATTAAAGGCCTTTGTGATGCTGGCTATGTAGACCAGGGCTTGAAGCTTTTCTATGAGATGCAATGTCAGGAGCCCAAATCCCAACCAGATGTGATAACCTATAATATTATTTTCAATGCCCTTTGTAAGGAGGGTAATCTCACCCGTGCCATCGATCTTCTAAACGGTATGCTGGATAGAGGTTGTGATCCTGACCTAGCTACATGCAATATCTTTTTG

Protein sequence

QPNTLTYNLIIKALCKLGQIERAIETFREMPLKSCNPDVFTYSTLMDGLCKERRIDEAVFLLDEMQIEGCLPNPVTFNVLIDAICKNGDLSRAAKLLDNMFLKGCVPNEVTYNTLIHGLCLKGKFDKALSLLDKMVSSKCVPNEVTYGIIINGLVKQGRAEDGAQILVSMEERGHKANEYIYSSLISGLFKEGKSEDAVRLWKEMSEKGCKPNVVVYGAFIDGLCREGRPDEAKEILDEMLINGCLPNAFTYSTLMNGFFKKGDSQKAILVWKETMNQDSRHNEVCCSVLLNGLCEDGKIREALIVWKHMLSEGLKPDVVAYSSMIKGLCDAGYVDQGLKLFYEMQCQEPKSQPDVITYNIIFNALCKEGNLTRAIDLLNGMLDRGCDPDLATCNIFL

Homology

[Close]

BLAST of MS022511 vs. NCBI nr
Match: XP_022146575.1 (pentatricopeptide repeat-containing protein At4g20090 [Momordica charantia] >XP_022146576.1 pentatricopeptide repeat-containing protein At4g20090 [Momordica charantia] >XP_022146577.1 pentatricopeptide repeat-containing protein At4g20090 [Momordica charantia] >XP_022146578.1 pentatricopeptide repeat-containing protein At4g20090 [Momordica charantia])

HSP 1 Score: 820.1 bits (2117), Expect = 8.4e-234
Identity = 393/398 (98.74%), Postives = 398/398 (100.00%), Query Frame = 0


Query: 1   QPNTLTYNLIIKALCKLGQIERAIETFREMPLKSCNPDVFTYSTLMDGLCKERRIDEAVF 60
           QPNTLTYNLIIKALCKLGQIERAIETFREMPLKSCNPDVFTYSTLMDGLCKERRIDEAVF
Sbjct: 189 QPNTLTYNLIIKALCKLGQIERAIETFREMPLKSCNPDVFTYSTLMDGLCKERRIDEAVF 248

Query: 61  LLDEMQIEGCLPNPVTFNVLIDAICKNGDLSRAAKLLDNMFLKGCVPNEVTYNTLIHGLC 120
           LLDEMQIEGCLPNPVTFNVLIDAICKNGDLSRAAKLLDNMFLKGCVPNEVTYNTLIHGLC
Sbjct: 249 LLDEMQIEGCLPNPVTFNVLIDAICKNGDLSRAAKLLDNMFLKGCVPNEVTYNTLIHGLC 308

Query: 121 LKGKFDKALSLLDKMVSSKCVPNEVTYGIIINGLVKQGRAEDGAQILVSMEERGHKANEY 180
           LKGKFDKALSLLDKMVSSKCVPNEVTYGIIINGLVKQGRAEDGAQILVSMEERGHKANEY
Sbjct: 309 LKGKFDKALSLLDKMVSSKCVPNEVTYGIIINGLVKQGRAEDGAQILVSMEERGHKANEY 368

Query: 181 IYSSLISGLFKEGKSEDAVRLWKEMSEKGCKPNVVVYGAFIDGLCREGRPDEAKEILDEM 240
           IYSSLISGLFKEGKSEDAVRLWKEMSEKGCKPNVVVYGAFIDGLCREG+PDEA+EILDEM
Sbjct: 369 IYSSLISGLFKEGKSEDAVRLWKEMSEKGCKPNVVVYGAFIDGLCREGKPDEAEEILDEM 428

Query: 241 LINGCLPNAFTYSTLMNGFFKKGDSQKAILVWKETMNQDSRHNEVCCSVLLNGLCEDGKI 300
           LINGCLPNAFTYSTLMNGFFKKGDSQKAILVWKETMNQDSRHNEVCCS+LLNGLCEDGKI
Sbjct: 429 LINGCLPNAFTYSTLMNGFFKKGDSQKAILVWKETMNQDSRHNEVCCSILLNGLCEDGKI 488

Query: 301 REALIVWKHMLSEGLKPDVVAYSSMIKGLCDAGYVDQGLKLFYEMQCQEPKSQPDVITYN 360
           REAL+VWKHMLS+GLKPDVVAYSSMIKGLCDAGYVDQGLKLFYEMQCQEPKSQPDVITYN
Sbjct: 489 REALMVWKHMLSKGLKPDVVAYSSMIKGLCDAGYVDQGLKLFYEMQCQEPKSQPDVITYN 548

Query: 361 IIFNALCKEGNLTRAIDLLNGMLDRGCDPDLATCNIFL 399
           IIFNALCKEGNLTRAIDLLNGMLDRGCDPDLATCNIFL
Sbjct: 549 IIFNALCKEGNLTRAIDLLNGMLDRGCDPDLATCNIFL 586

[Close]

BLAST of MS022511 vs. NCBI nr
Match: XP_022926533.1 (pentatricopeptide repeat-containing protein At4g20090 [Cucurbita moschata] >XP_022926534.1 pentatricopeptide repeat-containing protein At4g20090 [Cucurbita moschata])

HSP 1 Score: 754.2 bits (1946), Expect = 5.7e-214
Identity = 355/398 (89.20%), Postives = 377/398 (94.72%), Query Frame = 0


Query: 1   QPNTLTYNLIIKALCKLGQIERAIETFREMPLKSCNPDVFTYSTLMDGLCKERRIDEAVF 60
           QPN LTYNLIIK LCKLG+I+RA+ETFREM LK+CNPDVFTYSTLM+GLCKERRIDEAVF
Sbjct: 189 QPNVLTYNLIIKVLCKLGEIDRAVETFREMALKNCNPDVFTYSTLMNGLCKERRIDEAVF 248

Query: 61  LLDEMQIEGCLPNPVTFNVLIDAICKNGDLSRAAKLLDNMFLKGCVPNEVTYNTLIHGLC 120
           LLDE+Q EGCLPNPVTFNVLIDA+CKNGDLSRAAKL+DNMFLKGCVPNEVTYNTLIHGLC
Sbjct: 249 LLDELQTEGCLPNPVTFNVLIDALCKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLC 308

Query: 121 LKGKFDKALSLLDKMVSSKCVPNEVTYGIIINGLVKQGRAEDGAQILVSMEERGHKANEY 180
           LKGK DKALSLLDKMVSSKCVPNEVTYG IINGLVKQGRAEDGA ILVSMEERGHKAN+Y
Sbjct: 309 LKGKLDKALSLLDKMVSSKCVPNEVTYGTIINGLVKQGRAEDGAHILVSMEERGHKANQY 368

Query: 181 IYSSLISGLFKEGKSEDAVRLWKEMSEKGCKPNVVVYGAFIDGLCREGRPDEAKEILDEM 240
           IYSSLISGLFKEGKSEDAVR+WKEM EKGCKPNVVVYGAFIDGLCREG+PDEA+EIL EM
Sbjct: 369 IYSSLISGLFKEGKSEDAVRVWKEMMEKGCKPNVVVYGAFIDGLCREGKPDEAEEILYEM 428

Query: 241 LINGCLPNAFTYSTLMNGFFKKGDSQKAILVWKETMNQDSRHNEVCCSVLLNGLCEDGKI 300
           +  GCLPNAF YS+LM GFFKKGDSQKAILVWKE M+QD+RHNEVCCSVLLNGLCEDG++
Sbjct: 429 VSKGCLPNAFAYSSLMKGFFKKGDSQKAILVWKEMMSQDARHNEVCCSVLLNGLCEDGRV 488

Query: 301 REALIVWKHMLSEGLKPDVVAYSSMIKGLCDAGYVDQGLKLFYEMQCQEPKSQPDVITYN 360
           REAL VWKHMLSEG+KPDVVAYSSMIKGLCDAG VDQGLKLFYEMQCQEPKSQPDVITYN
Sbjct: 489 REALTVWKHMLSEGIKPDVVAYSSMIKGLCDAGSVDQGLKLFYEMQCQEPKSQPDVITYN 548

Query: 361 IIFNALCKEGNLTRAIDLLNGMLDRGCDPDLATCNIFL 399
           I+F ALC+EGNL RA+DLLN MLDRGCDPD  TCNIFL
Sbjct: 549 ILFKALCREGNLIRAVDLLNSMLDRGCDPDSTTCNIFL 586

[Close]

BLAST of MS022511 vs. NCBI nr
Match: XP_023518291.1 (pentatricopeptide repeat-containing protein At4g20090 [Cucurbita pepo subsp. pepo] >XP_023518292.1 pentatricopeptide repeat-containing protein At4g20090 [Cucurbita pepo subsp. pepo] >XP_023518293.1 pentatricopeptide repeat-containing protein At4g20090 [Cucurbita pepo subsp. pepo] >XP_023522712.1 pentatricopeptide repeat-containing protein At4g20090-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 753.8 bits (1945), Expect = 7.4e-214
Identity = 355/398 (89.20%), Postives = 377/398 (94.72%), Query Frame = 0


Query: 1   QPNTLTYNLIIKALCKLGQIERAIETFREMPLKSCNPDVFTYSTLMDGLCKERRIDEAVF 60
           QPN LTYNLIIK LCKLG+I+RA+ETFREMPLK+CNPDVFTYSTLM+GLCKERRIDEAVF
Sbjct: 189 QPNVLTYNLIIKVLCKLGEIDRAVETFREMPLKNCNPDVFTYSTLMNGLCKERRIDEAVF 248

Query: 61  LLDEMQIEGCLPNPVTFNVLIDAICKNGDLSRAAKLLDNMFLKGCVPNEVTYNTLIHGLC 120
           LLDE+Q EGCLPNPVTFNVLIDA+CKNGDLSRAAKL+DNMFLKGCVPNEVTYNTLIHGLC
Sbjct: 249 LLDELQTEGCLPNPVTFNVLIDALCKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLC 308

Query: 121 LKGKFDKALSLLDKMVSSKCVPNEVTYGIIINGLVKQGRAEDGAQILVSMEERGHKANEY 180
           LKGK DKALSLLDKMVSSKCVPNEVTYG IINGLVKQGRAEDGA ILVSMEERGHKAN+Y
Sbjct: 309 LKGKLDKALSLLDKMVSSKCVPNEVTYGTIINGLVKQGRAEDGAHILVSMEERGHKANQY 368

Query: 181 IYSSLISGLFKEGKSEDAVRLWKEMSEKGCKPNVVVYGAFIDGLCREGRPDEAKEILDEM 240
           IYSSLISGLFKEGKSEDAVR+WKEM EKGCKPNVVVYGAFIDGLCREG+PDEA+EIL EM
Sbjct: 369 IYSSLISGLFKEGKSEDAVRVWKEMMEKGCKPNVVVYGAFIDGLCREGKPDEAEEILYEM 428

Query: 241 LINGCLPNAFTYSTLMNGFFKKGDSQKAILVWKETMNQDSRHNEVCCSVLLNGLCEDGKI 300
           +  GCLPNAF YS+LM GFFKKGDSQKAILVWKE M+QD+RHNEVCCSVLL+GLCEDG++
Sbjct: 429 VSKGCLPNAFAYSSLMKGFFKKGDSQKAILVWKEMMSQDARHNEVCCSVLLHGLCEDGRV 488

Query: 301 REALIVWKHMLSEGLKPDVVAYSSMIKGLCDAGYVDQGLKLFYEMQCQEPKSQPDVITYN 360
           REAL VWKHMLSEG+KPDVVAYSSMIKGLCDAG VDQGLKLFYEMQCQEPKSQPDVITYN
Sbjct: 489 REALTVWKHMLSEGIKPDVVAYSSMIKGLCDAGSVDQGLKLFYEMQCQEPKSQPDVITYN 548

Query: 361 IIFNALCKEGNLTRAIDLLNGMLDRGCDPDLATCNIFL 399
           I+F ALCKEGNL RA+DLLN MLD GCDPD  TCNIFL
Sbjct: 549 ILFKALCKEGNLIRAVDLLNSMLDGGCDPDSTTCNIFL 586

[Close]

BLAST of MS022511 vs. NCBI nr
Match: XP_023003433.1 (pentatricopeptide repeat-containing protein At4g20090 [Cucurbita maxima] >XP_023003434.1 pentatricopeptide repeat-containing protein At4g20090 [Cucurbita maxima])

HSP 1 Score: 752.7 bits (1942), Expect = 1.6e-213
Identity = 354/398 (88.94%), Postives = 376/398 (94.47%), Query Frame = 0


Query: 1   QPNTLTYNLIIKALCKLGQIERAIETFREMPLKSCNPDVFTYSTLMDGLCKERRIDEAVF 60
           QPN LTYNLIIK LCKLG+I+RA+ETFREMPLK+CNPDVFTYSTLM+GLCKERRIDEAVF
Sbjct: 189 QPNVLTYNLIIKVLCKLGEIDRAVETFREMPLKNCNPDVFTYSTLMNGLCKERRIDEAVF 248

Query: 61  LLDEMQIEGCLPNPVTFNVLIDAICKNGDLSRAAKLLDNMFLKGCVPNEVTYNTLIHGLC 120
           LLDE+Q EGCLPNPVTFNVLIDA+CKNGDLSRAAKL+DNMFLKGCVPNEVTYNTLIHGLC
Sbjct: 249 LLDELQTEGCLPNPVTFNVLIDALCKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLC 308

Query: 121 LKGKFDKALSLLDKMVSSKCVPNEVTYGIIINGLVKQGRAEDGAQILVSMEERGHKANEY 180
           LKGK DKALSLLDKMVSSKCVPNEVTYG IINGLVKQGRAEDGA ILVSMEERGHKAN+Y
Sbjct: 309 LKGKLDKALSLLDKMVSSKCVPNEVTYGTIINGLVKQGRAEDGAHILVSMEERGHKANQY 368

Query: 181 IYSSLISGLFKEGKSEDAVRLWKEMSEKGCKPNVVVYGAFIDGLCREGRPDEAKEILDEM 240
           IYSSLISGLFKEGKSEDAVR+WKEM EKGCKPNVVVYGA IDGLCREG+PDEA+EIL EM
Sbjct: 369 IYSSLISGLFKEGKSEDAVRVWKEMMEKGCKPNVVVYGALIDGLCREGKPDEAEEILYEM 428

Query: 241 LINGCLPNAFTYSTLMNGFFKKGDSQKAILVWKETMNQDSRHNEVCCSVLLNGLCEDGKI 300
           +  GCLPNAF YS+LM GFFKKGDSQKAILVWKE M+QD+RHNEVCCSVLL+GLCEDG++
Sbjct: 429 VSKGCLPNAFAYSSLMKGFFKKGDSQKAILVWKEMMSQDARHNEVCCSVLLHGLCEDGRV 488

Query: 301 REALIVWKHMLSEGLKPDVVAYSSMIKGLCDAGYVDQGLKLFYEMQCQEPKSQPDVITYN 360
           REAL VWKHMLSEG+KPDVVAYSSMIKGLCDAG VDQGLKLFYEMQCQEPKSQPDVITYN
Sbjct: 489 REALTVWKHMLSEGIKPDVVAYSSMIKGLCDAGSVDQGLKLFYEMQCQEPKSQPDVITYN 548

Query: 361 IIFNALCKEGNLTRAIDLLNGMLDRGCDPDLATCNIFL 399
           I+F  LCKEGNL RA+DLLN MLDRGCDPD  TCNIFL
Sbjct: 549 ILFKVLCKEGNLIRAVDLLNSMLDRGCDPDSTTCNIFL 586

[Close]

BLAST of MS022511 vs. NCBI nr
Match: KAG6594382.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 751.1 bits (1938), Expect = 4.8e-213
Identity = 354/398 (88.94%), Postives = 376/398 (94.47%), Query Frame = 0


Query: 1   QPNTLTYNLIIKALCKLGQIERAIETFREMPLKSCNPDVFTYSTLMDGLCKERRIDEAVF 60
           QPN LTYNLIIK LCKLG+I+RA+ETFREMPLK+CNPDVFTYSTLM+GLCKERRIDEAVF
Sbjct: 189 QPNVLTYNLIIKVLCKLGEIDRAVETFREMPLKNCNPDVFTYSTLMNGLCKERRIDEAVF 248

Query: 61  LLDEMQIEGCLPNPVTFNVLIDAICKNGDLSRAAKLLDNMFLKGCVPNEVTYNTLIHGLC 120
           LLDE+Q EGCLPNPVTFNVLIDA+CKNGDLSRAAKL+DNMFLKGCVPNEVTYNTLIHGLC
Sbjct: 249 LLDELQTEGCLPNPVTFNVLIDALCKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLC 308

Query: 121 LKGKFDKALSLLDKMVSSKCVPNEVTYGIIINGLVKQGRAEDGAQILVSMEERGHKANEY 180
           LKGK DKALSLLDKMVSSKCVPNEVTYG IINGLVKQGRAEDGA ILVSMEERGHKAN+Y
Sbjct: 309 LKGKLDKALSLLDKMVSSKCVPNEVTYGTIINGLVKQGRAEDGAHILVSMEERGHKANQY 368

Query: 181 IYSSLISGLFKEGKSEDAVRLWKEMSEKGCKPNVVVYGAFIDGLCREGRPDEAKEILDEM 240
           IYSSLISGLFKEGKSEDAVR+WKEM EKGCKPNVVVYGAFIDGLCREG+PDEA+EIL EM
Sbjct: 369 IYSSLISGLFKEGKSEDAVRVWKEMMEKGCKPNVVVYGAFIDGLCREGKPDEAEEILYEM 428

Query: 241 LINGCLPNAFTYSTLMNGFFKKGDSQKAILVWKETMNQDSRHNEVCCSVLLNGLCEDGKI 300
           +  GCLPNAF YS+LM GFFKKGD QKAILVWKE M+QD+RHNEVCCSVLLNGLCEDG++
Sbjct: 429 VSKGCLPNAFAYSSLMKGFFKKGDGQKAILVWKEIMSQDARHNEVCCSVLLNGLCEDGRV 488

Query: 301 REALIVWKHMLSEGLKPDVVAYSSMIKGLCDAGYVDQGLKLFYEMQCQEPKSQPDVITYN 360
           REAL VWKHMLSEG+KPDVVAYSSMIKGLCDAG VDQGLKLFYEMQCQEPKSQPDVITYN
Sbjct: 489 REALTVWKHMLSEGIKPDVVAYSSMIKGLCDAGSVDQGLKLFYEMQCQEPKSQPDVITYN 548

Query: 361 IIFNALCKEGNLTRAIDLLNGMLDRGCDPDLATCNIFL 399
           I+F ALC+EGNL RA+DLLN MLDRGCDPD  T NIFL
Sbjct: 549 ILFKALCREGNLIRAVDLLNSMLDRGCDPDSTTGNIFL 586

[Close]

BLAST of MS022511 vs. ExPASy Swiss-Prot
Match: O49436 (Pentatricopeptide repeat-containing protein At4g20090 OS=Arabidopsis thaliana OX=3702 GN=EMB1025 PE=3 SV=1)

HSP 1 Score: 578.9 bits (1491), Expect = 4.3e-164
Identity = 264/398 (66.33%), Postives = 328/398 (82.41%), Query Frame = 0


Query: 2   PNTLTYNLIIKALCKLGQIERAIETFREMPLKSCNPDVFTYSTLMDGLCKERRIDEAVFL 61
           PN L++NL+IKALCKL  ++RAIE FR MP + C PD +TY TLMDGLCKE RIDEAV L
Sbjct: 185 PNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLL 244

Query: 62  LDEMQIEGCLPNPVTFNVLIDAICKNGDLSRAAKLLDNMFLKGCVPNEVTYNTLIHGLCL 121
           LDEMQ EGC P+PV +NVLID +CK GDL+R  KL+DNMFLKGCVPNEVTYNTLIHGLCL
Sbjct: 245 LDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCL 304

Query: 122 KGKFDKALSLLDKMVSSKCVPNEVTYGIIINGLVKQGRAEDGAQILVSMEERGHKANEYI 181
           KGK DKA+SLL++MVSSKC+PN+VTYG +INGLVKQ RA D  ++L SMEERG+  N++I
Sbjct: 305 KGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHI 364

Query: 182 YSSLISGLFKEGKSEDAVRLWKEMSEKGCKPNVVVYGAFIDGLCREGRPDEAKEILDEML 241
           YS LISGLFKEGK+E+A+ LW++M+EKGCKPN+VVY   +DGLCREG+P+EAKEIL+ M+
Sbjct: 365 YSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMI 424

Query: 242 INGCLPNAFTYSTLMNGFFKKGDSQKAILVWKETMNQDSRHNEVCCSVLLNGLCEDGKIR 301
            +GCLPNA+TYS+LM GFFK G  ++A+ VWKE        N+ C SVL++GLC  G+++
Sbjct: 425 ASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVK 484

Query: 302 EALIVWKHMLSEGLKPDVVAYSSMIKGLCDAGYVDQGLKLFYEMQCQ-EPKSQPDVITYN 361
           EA++VW  ML+ G+KPD VAYSS+IKGLC  G +D  LKL++EM CQ EPKSQPDV+TYN
Sbjct: 485 EAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYN 544

Query: 362 IIFNALCKEGNLTRAIDLLNGMLDRGCDPDLATCNIFL 399
           I+ + LC + +++RA+DLLN MLDRGCDPD+ TCN FL
Sbjct: 545 ILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFL 582

[Close]

BLAST of MS022511 vs. ExPASy Swiss-Prot
Match: Q3EDF8 (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX=3702 GN=At1g09900 PE=2 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 2.4e-74
Identity = 133/397 (33.50%), Postives = 228/397 (57.43%), Query Frame = 0


Query: 2   PNTLTYNLIIKALCKLGQIERAIETFREMPLKSCNPDVFTYSTLMDGLCKERRIDEAVFL 61
           P+ +TYN++I   CK G+I  A+     M   S +PDV TY+T++  LC   ++ +A+ +
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEV 229

Query: 62  LDEMQIEGCLPNPVTFNVLIDAICKNGDLSRAAKLLDNMFLKGCVPNEVTYNTLIHGLCL 121
           LD M    C P+ +T+ +LI+A C++  +  A KLLD M  +GC P+ VTYN L++G+C 
Sbjct: 230 LDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICK 289

Query: 122 KGKFDKALSLLDKMVSSKCVPNEVTYGIIINGLVKQGRAEDGAQILVSMEERGHKANEYI 181
           +G+ D+A+  L+ M SS C PN +T+ II+  +   GR  D  ++L  M  +G   +   
Sbjct: 290 EGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVT 349

Query: 182 YSSLISGLFKEGKSEDAVRLWKEMSEKGCKPNVVVYGAFIDGLCREGRPDEAKEILDEML 241
           ++ LI+ L ++G    A+ + ++M + GC+PN + Y   + G C+E + D A E L+ M+
Sbjct: 350 FNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMV 409

Query: 242 INGCLPNAFTYSTLMNGFFKKGDSQKAILVWKETMNQDSRHNEVCCSVLLNGLCEDGKIR 301
             GC P+  TY+T++    K G  + A+ +  +  ++      +  + +++GL + GK  
Sbjct: 410 SRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTG 469

Query: 302 EALIVWKHMLSEGLKPDVVAYSSMIKGLCDAGYVDQGLKLFYEMQCQEPKSQPDVITYNI 361
           +A+ +   M ++ LKPD + YSS++ GL   G VD+ +K F+E   +    +P+ +T+N 
Sbjct: 470 KAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEF--ERMGIRPNAVTFNS 529

Query: 362 IFNALCKEGNLTRAIDLLNGMLDRGCDPDLATCNIFL 399
           I   LCK     RAID L  M++RGC P+  +  I +
Sbjct: 530 IMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILI 561

[Close]

BLAST of MS022511 vs. ExPASy Swiss-Prot
Match: Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 3.6e-70
Identity = 133/378 (35.19%), Postives = 219/378 (57.94%), Query Frame = 0


Query: 2   PNTLTYNLIIKALCKLGQIERAIETFREMPLKSCNPDVFTYSTLMDGLCKERRIDEAVFL 61
           PN  TYN++I+  C  G I+ A+  F +M  K C P+V TY+TL+DG CK R+ID+   L
Sbjct: 203 PNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKL 262

Query: 62  LDEMQIEGCLPNPVTFNVLIDAICKNGDLSRAAKLLDNMFLKGCVPNEVTYNTLIHGLCL 121
           L  M ++G  PN +++NV+I+ +C+ G +   + +L  M  +G   +EVTYNTLI G C 
Sbjct: 263 LRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCK 322

Query: 122 KGKFDKALSLLDKMVSSKCVPNEVTYGIIINGLVKQGRAEDGAQILVSMEERGHKANEYI 181
           +G F +AL +  +M+     P+ +TY  +I+ + K G      + L  M  RG   NE  
Sbjct: 323 EGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERT 382

Query: 182 YSSLISGLFKEGKSEDAVRLWKEMSEKGCKPNVVVYGAFIDGLCREGRPDEAKEILDEML 241
           Y++L+ G  ++G   +A R+ +EM++ G  P+VV Y A I+G C  G+ ++A  +L++M 
Sbjct: 383 YTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMK 442

Query: 242 INGCLPNAFTYSTLMNGFFKKGDSQKAILVWKETMNQDSRHNEVCCSVLLNGLCEDGKIR 301
             G  P+  +YST+++GF +  D  +A+ V +E + +  + + +  S L+ G CE  + +
Sbjct: 443 EKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTK 502

Query: 302 EALIVWKHMLSEGLKPDVVAYSSMIKGLCDAGYVDQGLKLFYEMQCQEPKSQPDVITYNI 361
           EA  +++ ML  GL PD   Y+++I   C  G +++ L+L  EM   E    PDV+TY++
Sbjct: 503 EACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEM--VEKGVLPDVVTYSV 562

Query: 362 IFNALCKEGNLTRAIDLL 380
           + N L K+     A  LL
Sbjct: 563 LINGLNKQSRTREAKRLL 578

[Close]

BLAST of MS022511 vs. ExPASy Swiss-Prot
Match: Q9CAN0 (Pentatricopeptide repeat-containing protein At1g63130, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g63130 PE=2 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 3.6e-70
Identity = 137/398 (34.42%), Postives = 221/398 (55.53%), Query Frame = 0


Query: 1   QPNTLTYNLIIKALCKLGQIERAIETFREMPLKSCNPDVFTYSTLMDGLCKERRIDEAVF 60
           QP++ T+N +I  L +  +   A+     M +K C PD+ TY  +++GLCK   ID A+ 
Sbjct: 183 QPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALS 242

Query: 61  LLDEMQIEGCLPNPVTFNVLIDAICKNGDLSRAAKLLDNMFLKGCVPNEVTYNTLIHGLC 120
           LL +M+     P  V +N +IDA+C   +++ A  L   M  KG  PN VTYN+LI  LC
Sbjct: 243 LLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 302

Query: 121 LKGKFDKALSLLDKMVSSKCVPNEVTYGIIINGLVKQGRAEDGAQILVSMEERGHKANEY 180
             G++  A  LL  M+  K  PN VT+  +I+  VK+G+  +  ++   M +R    + +
Sbjct: 303 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 362

Query: 181 IYSSLISGLFKEGKSEDAVRLWKEMSEKGCKPNVVVYGAFIDGLCREGRPDEAKEILDEM 240
            YSSLI+G     + ++A  +++ M  K C PNVV Y   I G C+  R DE  E+  EM
Sbjct: 363 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREM 422

Query: 241 LINGCLPNAFTYSTLMNGFFKKGDSQKAILVWKETMNQDSRHNEVCCSVLLNGLCEDGKI 300
              G + N  TY+TL++GFF+  +   A +V+K+ ++     + +  S+LL+GLC +GK+
Sbjct: 423 SQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKV 482

Query: 301 REALIVWKHMLSEGLKPDVVAYSSMIKGLCDAGYVDQGLKLFYEMQCQEPKSQPDVITYN 360
             AL+V++++    ++PD+  Y+ MI+G+C AG V+ G  LF  +  +  K  P+V+TY 
Sbjct: 483 ETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK--PNVVTYT 542

Query: 361 IIFNALCKEGNLTRAIDLLNGMLDRGCDPDLATCNIFL 399
            + +  C++G    A  L   M + G  PD  T N  +
Sbjct: 543 TMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLI 578

[Close]

BLAST of MS022511 vs. ExPASy Swiss-Prot
Match: Q9SR00 (Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g04760 PE=2 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.0e-69
Identity = 130/398 (32.66%), Postives = 213/398 (53.52%), Query Frame = 0


Query: 1   QPNTLTYNLIIKALCKLGQIERAIETFREMPLKSCNPDVFTYSTLMDGLCKERRIDEAVF 60
           QP+   YN +I   CK+ +I+ A      M  K  +PD  TY+ ++  LC   ++D A+ 
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214

Query: 61  LLDEMQIEGCLPNPVTFNVLIDAICKNGDLSRAAKLLDNMFLKGCVPNEVTYNTLIHGLC 120
           +L+++  + C P  +T+ +LI+A    G +  A KL+D M  +G  P+  TYNT+I G+C
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274

Query: 121 LKGKFDKALSLLDKMVSSKCVPNEVTYGIIINGLVKQGRAEDGAQILVSMEERGHKANEY 180
            +G  D+A  ++  +    C P+ ++Y I++  L+ QG+ E+G +++  M       N  
Sbjct: 275 KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334

Query: 181 IYSSLISGLFKEGKSEDAVRLWKEMSEKGCKPNVVVYGAFIDGLCREGRPDEAKEILDEM 240
            YS LI+ L ++GK E+A+ L K M EKG  P+   Y   I   CREGR D A E L+ M
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394

Query: 241 LINGCLPNAFTYSTLMNGFFKKGDSQKAILVWKETMNQDSRHNEVCCSVLLNGLCEDGKI 300
           + +GCLP+   Y+T++    K G + +A+ ++ +        N    + + + L   G  
Sbjct: 395 ISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDK 454

Query: 301 REALIVWKHMLSEGLKPDVVAYSSMIKGLCDAGYVDQGLKLFYEMQCQEPKSQPDVITYN 360
             AL +   M+S G+ PD + Y+SMI  LC  G VD+  +L  +M+  E    P V+TYN
Sbjct: 455 IRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCE--FHPSVVTYN 514

Query: 361 IIFNALCKEGNLTRAIDLLNGMLDRGCDPDLATCNIFL 399
           I+    CK   +  AI++L  M+  GC P+  T  + +
Sbjct: 515 IVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLI 550

[Close]

BLAST of MS022511 vs. ExPASy TrEMBL
Match: A0A6J1CYY5 (pentatricopeptide repeat-containing protein At4g20090 OS=Momordica charantia OX=3673 GN=LOC111015754 PE=4 SV=1)

HSP 1 Score: 820.1 bits (2117), Expect = 4.1e-234
Identity = 393/398 (98.74%), Postives = 398/398 (100.00%), Query Frame = 0


Query: 1   QPNTLTYNLIIKALCKLGQIERAIETFREMPLKSCNPDVFTYSTLMDGLCKERRIDEAVF 60
           QPNTLTYNLIIKALCKLGQIERAIETFREMPLKSCNPDVFTYSTLMDGLCKERRIDEAVF
Sbjct: 189 QPNTLTYNLIIKALCKLGQIERAIETFREMPLKSCNPDVFTYSTLMDGLCKERRIDEAVF 248

Query: 61  LLDEMQIEGCLPNPVTFNVLIDAICKNGDLSRAAKLLDNMFLKGCVPNEVTYNTLIHGLC 120
           LLDEMQIEGCLPNPVTFNVLIDAICKNGDLSRAAKLLDNMFLKGCVPNEVTYNTLIHGLC
Sbjct: 249 LLDEMQIEGCLPNPVTFNVLIDAICKNGDLSRAAKLLDNMFLKGCVPNEVTYNTLIHGLC 308

Query: 121 LKGKFDKALSLLDKMVSSKCVPNEVTYGIIINGLVKQGRAEDGAQILVSMEERGHKANEY 180
           LKGKFDKALSLLDKMVSSKCVPNEVTYGIIINGLVKQGRAEDGAQILVSMEERGHKANEY
Sbjct: 309 LKGKFDKALSLLDKMVSSKCVPNEVTYGIIINGLVKQGRAEDGAQILVSMEERGHKANEY 368

Query: 181 IYSSLISGLFKEGKSEDAVRLWKEMSEKGCKPNVVVYGAFIDGLCREGRPDEAKEILDEM 240
           IYSSLISGLFKEGKSEDAVRLWKEMSEKGCKPNVVVYGAFIDGLCREG+PDEA+EILDEM
Sbjct: 369 IYSSLISGLFKEGKSEDAVRLWKEMSEKGCKPNVVVYGAFIDGLCREGKPDEAEEILDEM 428

Query: 241 LINGCLPNAFTYSTLMNGFFKKGDSQKAILVWKETMNQDSRHNEVCCSVLLNGLCEDGKI 300
           LINGCLPNAFTYSTLMNGFFKKGDSQKAILVWKETMNQDSRHNEVCCS+LLNGLCEDGKI
Sbjct: 429 LINGCLPNAFTYSTLMNGFFKKGDSQKAILVWKETMNQDSRHNEVCCSILLNGLCEDGKI 488

Query: 301 REALIVWKHMLSEGLKPDVVAYSSMIKGLCDAGYVDQGLKLFYEMQCQEPKSQPDVITYN 360
           REAL+VWKHMLS+GLKPDVVAYSSMIKGLCDAGYVDQGLKLFYEMQCQEPKSQPDVITYN
Sbjct: 489 REALMVWKHMLSKGLKPDVVAYSSMIKGLCDAGYVDQGLKLFYEMQCQEPKSQPDVITYN 548

Query: 361 IIFNALCKEGNLTRAIDLLNGMLDRGCDPDLATCNIFL 399
           IIFNALCKEGNLTRAIDLLNGMLDRGCDPDLATCNIFL
Sbjct: 549 IIFNALCKEGNLTRAIDLLNGMLDRGCDPDLATCNIFL 586

[Close]

BLAST of MS022511 vs. ExPASy TrEMBL
Match: A0A6J1EIB7 (pentatricopeptide repeat-containing protein At4g20090 OS=Cucurbita moschata OX=3662 GN=LOC111433651 PE=4 SV=1)

HSP 1 Score: 754.2 bits (1946), Expect = 2.7e-214
Identity = 355/398 (89.20%), Postives = 377/398 (94.72%), Query Frame = 0


Query: 1   QPNTLTYNLIIKALCKLGQIERAIETFREMPLKSCNPDVFTYSTLMDGLCKERRIDEAVF 60
           QPN LTYNLIIK LCKLG+I+RA+ETFREM LK+CNPDVFTYSTLM+GLCKERRIDEAVF
Sbjct: 189 QPNVLTYNLIIKVLCKLGEIDRAVETFREMALKNCNPDVFTYSTLMNGLCKERRIDEAVF 248

Query: 61  LLDEMQIEGCLPNPVTFNVLIDAICKNGDLSRAAKLLDNMFLKGCVPNEVTYNTLIHGLC 120
           LLDE+Q EGCLPNPVTFNVLIDA+CKNGDLSRAAKL+DNMFLKGCVPNEVTYNTLIHGLC
Sbjct: 249 LLDELQTEGCLPNPVTFNVLIDALCKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLC 308

Query: 121 LKGKFDKALSLLDKMVSSKCVPNEVTYGIIINGLVKQGRAEDGAQILVSMEERGHKANEY 180
           LKGK DKALSLLDKMVSSKCVPNEVTYG IINGLVKQGRAEDGA ILVSMEERGHKAN+Y
Sbjct: 309 LKGKLDKALSLLDKMVSSKCVPNEVTYGTIINGLVKQGRAEDGAHILVSMEERGHKANQY 368

Query: 181 IYSSLISGLFKEGKSEDAVRLWKEMSEKGCKPNVVVYGAFIDGLCREGRPDEAKEILDEM 240
           IYSSLISGLFKEGKSEDAVR+WKEM EKGCKPNVVVYGAFIDGLCREG+PDEA+EIL EM
Sbjct: 369 IYSSLISGLFKEGKSEDAVRVWKEMMEKGCKPNVVVYGAFIDGLCREGKPDEAEEILYEM 428

Query: 241 LINGCLPNAFTYSTLMNGFFKKGDSQKAILVWKETMNQDSRHNEVCCSVLLNGLCEDGKI 300
           +  GCLPNAF YS+LM GFFKKGDSQKAILVWKE M+QD+RHNEVCCSVLLNGLCEDG++
Sbjct: 429 VSKGCLPNAFAYSSLMKGFFKKGDSQKAILVWKEMMSQDARHNEVCCSVLLNGLCEDGRV 488

Query: 301 REALIVWKHMLSEGLKPDVVAYSSMIKGLCDAGYVDQGLKLFYEMQCQEPKSQPDVITYN 360
           REAL VWKHMLSEG+KPDVVAYSSMIKGLCDAG VDQGLKLFYEMQCQEPKSQPDVITYN
Sbjct: 489 REALTVWKHMLSEGIKPDVVAYSSMIKGLCDAGSVDQGLKLFYEMQCQEPKSQPDVITYN 548

Query: 361 IIFNALCKEGNLTRAIDLLNGMLDRGCDPDLATCNIFL 399
           I+F ALC+EGNL RA+DLLN MLDRGCDPD  TCNIFL
Sbjct: 549 ILFKALCREGNLIRAVDLLNSMLDRGCDPDSTTCNIFL 586

[Close]

BLAST of MS022511 vs. ExPASy TrEMBL
Match: A0A6J1KWH5 (pentatricopeptide repeat-containing protein At4g20090 OS=Cucurbita maxima OX=3661 GN=LOC111497049 PE=4 SV=1)

HSP 1 Score: 752.7 bits (1942), Expect = 8.0e-214
Identity = 354/398 (88.94%), Postives = 376/398 (94.47%), Query Frame = 0


Query: 1   QPNTLTYNLIIKALCKLGQIERAIETFREMPLKSCNPDVFTYSTLMDGLCKERRIDEAVF 60
           QPN LTYNLIIK LCKLG+I+RA+ETFREMPLK+CNPDVFTYSTLM+GLCKERRIDEAVF
Sbjct: 189 QPNVLTYNLIIKVLCKLGEIDRAVETFREMPLKNCNPDVFTYSTLMNGLCKERRIDEAVF 248

Query: 61  LLDEMQIEGCLPNPVTFNVLIDAICKNGDLSRAAKLLDNMFLKGCVPNEVTYNTLIHGLC 120
           LLDE+Q EGCLPNPVTFNVLIDA+CKNGDLSRAAKL+DNMFLKGCVPNEVTYNTLIHGLC
Sbjct: 249 LLDELQTEGCLPNPVTFNVLIDALCKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLC 308

Query: 121 LKGKFDKALSLLDKMVSSKCVPNEVTYGIIINGLVKQGRAEDGAQILVSMEERGHKANEY 180
           LKGK DKALSLLDKMVSSKCVPNEVTYG IINGLVKQGRAEDGA ILVSMEERGHKAN+Y
Sbjct: 309 LKGKLDKALSLLDKMVSSKCVPNEVTYGTIINGLVKQGRAEDGAHILVSMEERGHKANQY 368

Query: 181 IYSSLISGLFKEGKSEDAVRLWKEMSEKGCKPNVVVYGAFIDGLCREGRPDEAKEILDEM 240
           IYSSLISGLFKEGKSEDAVR+WKEM EKGCKPNVVVYGA IDGLCREG+PDEA+EIL EM
Sbjct: 369 IYSSLISGLFKEGKSEDAVRVWKEMMEKGCKPNVVVYGALIDGLCREGKPDEAEEILYEM 428

Query: 241 LINGCLPNAFTYSTLMNGFFKKGDSQKAILVWKETMNQDSRHNEVCCSVLLNGLCEDGKI 300
           +  GCLPNAF YS+LM GFFKKGDSQKAILVWKE M+QD+RHNEVCCSVLL+GLCEDG++
Sbjct: 429 VSKGCLPNAFAYSSLMKGFFKKGDSQKAILVWKEMMSQDARHNEVCCSVLLHGLCEDGRV 488

Query: 301 REALIVWKHMLSEGLKPDVVAYSSMIKGLCDAGYVDQGLKLFYEMQCQEPKSQPDVITYN 360
           REAL VWKHMLSEG+KPDVVAYSSMIKGLCDAG VDQGLKLFYEMQCQEPKSQPDVITYN
Sbjct: 489 REALTVWKHMLSEGIKPDVVAYSSMIKGLCDAGSVDQGLKLFYEMQCQEPKSQPDVITYN 548

Query: 361 IIFNALCKEGNLTRAIDLLNGMLDRGCDPDLATCNIFL 399
           I+F  LCKEGNL RA+DLLN MLDRGCDPD  TCNIFL
Sbjct: 549 ILFKVLCKEGNLIRAVDLLNSMLDRGCDPDSTTCNIFL 586

[Close]

BLAST of MS022511 vs. ExPASy TrEMBL
Match: A0A0A0LP34 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G238820 PE=4 SV=1)

HSP 1 Score: 724.2 bits (1868), Expect = 3.0e-205
Identity = 342/398 (85.93%), Postives = 369/398 (92.71%), Query Frame = 0


Query: 1   QPNTLTYNLIIKALCKLGQIERAIETFREMPLKSCNPDVFTYSTLMDGLCKERRIDEAVF 60
           QPN LTYNLIIKALCKLGQI+RA++TFREMPLK+CNPDVFTYSTLM+GLCKERR+DEAVF
Sbjct: 195 QPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVF 254

Query: 61  LLDEMQIEGCLPNPVTFNVLIDAICKNGDLSRAAKLLDNMFLKGCVPNEVTYNTLIHGLC 120
           LLDEMQ EGCLPNPVTFNVLIDA+ KNGDLSRAAKL+DNMFLKGCVPNEVTYNTLIHGLC
Sbjct: 255 LLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLC 314

Query: 121 LKGKFDKALSLLDKMVSSKCVPNEVTYGIIINGLVKQGRAEDGAQILVSMEERGHKANEY 180
           LKGK DKALSLL+KMVSSKCVPN+VTYG IINGLVKQ RAEDG  IL+SMEERG KANEY
Sbjct: 315 LKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEY 374

Query: 181 IYSSLISGLFKEGKSEDAVRLWKEMSEKGCKPNVVVYGAFIDGLCREGRPDEAKEILDEM 240
           IYSSLISGLFKEGKSE+AVRLWKEM+EKGCKPNVVVYGAFIDGLCR+ +PDEA++IL EM
Sbjct: 375 IYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEM 434

Query: 241 LINGCLPNAFTYSTLMNGFFKKGDSQKAILVWKETMNQDSRHNEVCCSVLLNGLCEDGKI 300
           L  G LPNAFTYS+LM GFFKKGDSQKAILVWKE M+QD RHN VCCSVLLNGLCE G++
Sbjct: 435 LSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRL 494

Query: 301 REALIVWKHMLSEGLKPDVVAYSSMIKGLCDAGYVDQGLKLFYEMQCQEPKSQPDVITYN 360
           REAL VW HML EGLKPDVVAYSSMIKGLCD G VD+GLKLFYEMQCQEPKS+PDV+TYN
Sbjct: 495 REALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYN 554

Query: 361 IIFNALCKEGNLTRAIDLLNGMLDRGCDPDLATCNIFL 399
           I+FNALC++ NLTRAIDLLN MLD GCDPD  TCNIFL
Sbjct: 555 ILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFL 592

[Close]

BLAST of MS022511 vs. ExPASy TrEMBL
Match: A0A1S3CAZ3 (pentatricopeptide repeat-containing protein At4g20090 OS=Cucumis melo OX=3656 GN=LOC103498433 PE=4 SV=1)

HSP 1 Score: 721.5 bits (1861), Expect = 2.0e-204
Identity = 340/398 (85.43%), Postives = 367/398 (92.21%), Query Frame = 0


Query: 1   QPNTLTYNLIIKALCKLGQIERAIETFREMPLKSCNPDVFTYSTLMDGLCKERRIDEAVF 60
           QPN LTYNLIIK LCKLGQI+RA++TFREMPLK+CNPDVFTYSTLM+GLCKE R+DEAVF
Sbjct: 171 QPNLLTYNLIIKTLCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKESRVDEAVF 230

Query: 61  LLDEMQIEGCLPNPVTFNVLIDAICKNGDLSRAAKLLDNMFLKGCVPNEVTYNTLIHGLC 120
           LLDEMQ EGCLPNPVT+NVLIDA+CKNGDLSRAAKL+DNMFLKGCVPNEVTYNTLIHGLC
Sbjct: 231 LLDEMQAEGCLPNPVTYNVLIDALCKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLC 290

Query: 121 LKGKFDKALSLLDKMVSSKCVPNEVTYGIIINGLVKQGRAEDGAQILVSMEERGHKANEY 180
           LKGK DKALSLL+KMVSSKCVPN VTYG IINGLV+Q RAEDG  ILVSMEERG KANEY
Sbjct: 291 LKGKLDKALSLLEKMVSSKCVPNRVTYGTIINGLVQQRRAEDGVHILVSMEERGQKANEY 350

Query: 181 IYSSLISGLFKEGKSEDAVRLWKEMSEKGCKPNVVVYGAFIDGLCREGRPDEAKEILDEM 240
           IYSSLISGLFKEGKSE+AVRLWKEM+EKGCKPNVVVYGAFIDGLCR+ +PDEA++IL EM
Sbjct: 351 IYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEM 410

Query: 241 LINGCLPNAFTYSTLMNGFFKKGDSQKAILVWKETMNQDSRHNEVCCSVLLNGLCEDGKI 300
           L  G LPNAFTYS+LM GFFKKGDSQKAILVWKE M+QD RHN VCCSVLLNGLCE G++
Sbjct: 411 LSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRL 470

Query: 301 REALIVWKHMLSEGLKPDVVAYSSMIKGLCDAGYVDQGLKLFYEMQCQEPKSQPDVITYN 360
           REAL VWKHML EGLKPDVVAYSSMIKGLCD G VD+GLKLFYEMQCQEPKS+PDV+TYN
Sbjct: 471 REALTVWKHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYN 530

Query: 361 IIFNALCKEGNLTRAIDLLNGMLDRGCDPDLATCNIFL 399
           I+ NALC++ NLTRAIDLLN MLD GCDPD  TCNIFL
Sbjct: 531 ILLNALCRQDNLTRAIDLLNSMLDEGCDPDSYTCNIFL 568

[Close]

BLAST of MS022511 vs. TAIR 10
Match: AT4G20090.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 578.9 bits (1491), Expect = 3.0e-165
Identity = 264/398 (66.33%), Postives = 328/398 (82.41%), Query Frame = 0


Query: 2   PNTLTYNLIIKALCKLGQIERAIETFREMPLKSCNPDVFTYSTLMDGLCKERRIDEAVFL 61
           PN L++NL+IKALCKL  ++RAIE FR MP + C PD +TY TLMDGLCKE RIDEAV L
Sbjct: 185 PNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLL 244

Query: 62  LDEMQIEGCLPNPVTFNVLIDAICKNGDLSRAAKLLDNMFLKGCVPNEVTYNTLIHGLCL 121
           LDEMQ EGC P+PV +NVLID +CK GDL+R  KL+DNMFLKGCVPNEVTYNTLIHGLCL
Sbjct: 245 LDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCL 304

Query: 122 KGKFDKALSLLDKMVSSKCVPNEVTYGIIINGLVKQGRAEDGAQILVSMEERGHKANEYI 181
           KGK DKA+SLL++MVSSKC+PN+VTYG +INGLVKQ RA D  ++L SMEERG+  N++I
Sbjct: 305 KGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHI 364

Query: 182 YSSLISGLFKEGKSEDAVRLWKEMSEKGCKPNVVVYGAFIDGLCREGRPDEAKEILDEML 241
           YS LISGLFKEGK+E+A+ LW++M+EKGCKPN+VVY   +DGLCREG+P+EAKEIL+ M+
Sbjct: 365 YSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMI 424

Query: 242 INGCLPNAFTYSTLMNGFFKKGDSQKAILVWKETMNQDSRHNEVCCSVLLNGLCEDGKIR 301
            +GCLPNA+TYS+LM GFFK G  ++A+ VWKE        N+ C SVL++GLC  G+++
Sbjct: 425 ASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVK 484

Query: 302 EALIVWKHMLSEGLKPDVVAYSSMIKGLCDAGYVDQGLKLFYEMQCQ-EPKSQPDVITYN 361
           EA++VW  ML+ G+KPD VAYSS+IKGLC  G +D  LKL++EM CQ EPKSQPDV+TYN
Sbjct: 485 EAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYN 544

Query: 362 IIFNALCKEGNLTRAIDLLNGMLDRGCDPDLATCNIFL 399
           I+ + LC + +++RA+DLLN MLDRGCDPD+ TCN FL
Sbjct: 545 ILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFL 582

[Close]

BLAST of MS022511 vs. TAIR 10
Match: AT1G09900.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 280.8 bits (717), Expect = 1.7e-75
Identity = 133/397 (33.50%), Postives = 228/397 (57.43%), Query Frame = 0


Query: 2   PNTLTYNLIIKALCKLGQIERAIETFREMPLKSCNPDVFTYSTLMDGLCKERRIDEAVFL 61
           P+ +TYN++I   CK G+I  A+     M   S +PDV TY+T++  LC   ++ +A+ +
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEV 229

Query: 62  LDEMQIEGCLPNPVTFNVLIDAICKNGDLSRAAKLLDNMFLKGCVPNEVTYNTLIHGLCL 121
           LD M    C P+ +T+ +LI+A C++  +  A KLLD M  +GC P+ VTYN L++G+C 
Sbjct: 230 LDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICK 289

Query: 122 KGKFDKALSLLDKMVSSKCVPNEVTYGIIINGLVKQGRAEDGAQILVSMEERGHKANEYI 181
           +G+ D+A+  L+ M SS C PN +T+ II+  +   GR  D  ++L  M  +G   +   
Sbjct: 290 EGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVT 349

Query: 182 YSSLISGLFKEGKSEDAVRLWKEMSEKGCKPNVVVYGAFIDGLCREGRPDEAKEILDEML 241
           ++ LI+ L ++G    A+ + ++M + GC+PN + Y   + G C+E + D A E L+ M+
Sbjct: 350 FNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMV 409

Query: 242 INGCLPNAFTYSTLMNGFFKKGDSQKAILVWKETMNQDSRHNEVCCSVLLNGLCEDGKIR 301
             GC P+  TY+T++    K G  + A+ +  +  ++      +  + +++GL + GK  
Sbjct: 410 SRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTG 469

Query: 302 EALIVWKHMLSEGLKPDVVAYSSMIKGLCDAGYVDQGLKLFYEMQCQEPKSQPDVITYNI 361
           +A+ +   M ++ LKPD + YSS++ GL   G VD+ +K F+E   +    +P+ +T+N 
Sbjct: 470 KAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEF--ERMGIRPNAVTFNS 529

Query: 362 IFNALCKEGNLTRAIDLLNGMLDRGCDPDLATCNIFL 399
           I   LCK     RAID L  M++RGC P+  +  I +
Sbjct: 530 IMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILI 561

[Close]

BLAST of MS022511 vs. TAIR 10
Match: AT1G63130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 266.9 bits (681), Expect = 2.6e-71
Identity = 137/398 (34.42%), Postives = 221/398 (55.53%), Query Frame = 0


Query: 1   QPNTLTYNLIIKALCKLGQIERAIETFREMPLKSCNPDVFTYSTLMDGLCKERRIDEAVF 60
           QP++ T+N +I  L +  +   A+     M +K C PD+ TY  +++GLCK   ID A+ 
Sbjct: 183 QPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALS 242

Query: 61  LLDEMQIEGCLPNPVTFNVLIDAICKNGDLSRAAKLLDNMFLKGCVPNEVTYNTLIHGLC 120
           LL +M+     P  V +N +IDA+C   +++ A  L   M  KG  PN VTYN+LI  LC
Sbjct: 243 LLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 302

Query: 121 LKGKFDKALSLLDKMVSSKCVPNEVTYGIIINGLVKQGRAEDGAQILVSMEERGHKANEY 180
             G++  A  LL  M+  K  PN VT+  +I+  VK+G+  +  ++   M +R    + +
Sbjct: 303 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 362

Query: 181 IYSSLISGLFKEGKSEDAVRLWKEMSEKGCKPNVVVYGAFIDGLCREGRPDEAKEILDEM 240
            YSSLI+G     + ++A  +++ M  K C PNVV Y   I G C+  R DE  E+  EM
Sbjct: 363 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREM 422

Query: 241 LINGCLPNAFTYSTLMNGFFKKGDSQKAILVWKETMNQDSRHNEVCCSVLLNGLCEDGKI 300
              G + N  TY+TL++GFF+  +   A +V+K+ ++     + +  S+LL+GLC +GK+
Sbjct: 423 SQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKV 482

Query: 301 REALIVWKHMLSEGLKPDVVAYSSMIKGLCDAGYVDQGLKLFYEMQCQEPKSQPDVITYN 360
             AL+V++++    ++PD+  Y+ MI+G+C AG V+ G  LF  +  +  K  P+V+TY 
Sbjct: 483 ETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK--PNVVTYT 542

Query: 361 IIFNALCKEGNLTRAIDLLNGMLDRGCDPDLATCNIFL 399
            + +  C++G    A  L   M + G  PD  T N  +
Sbjct: 543 TMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLI 578

[Close]

BLAST of MS022511 vs. TAIR 10
Match: AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 266.9 bits (681), Expect = 2.6e-71
Identity = 133/378 (35.19%), Postives = 219/378 (57.94%), Query Frame = 0


Query: 2   PNTLTYNLIIKALCKLGQIERAIETFREMPLKSCNPDVFTYSTLMDGLCKERRIDEAVFL 61
           PN  TYN++I+  C  G I+ A+  F +M  K C P+V TY+TL+DG CK R+ID+   L
Sbjct: 203 PNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKL 262

Query: 62  LDEMQIEGCLPNPVTFNVLIDAICKNGDLSRAAKLLDNMFLKGCVPNEVTYNTLIHGLCL 121
           L  M ++G  PN +++NV+I+ +C+ G +   + +L  M  +G   +EVTYNTLI G C 
Sbjct: 263 LRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCK 322

Query: 122 KGKFDKALSLLDKMVSSKCVPNEVTYGIIINGLVKQGRAEDGAQILVSMEERGHKANEYI 181
           +G F +AL +  +M+     P+ +TY  +I+ + K G      + L  M  RG   NE  
Sbjct: 323 EGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERT 382

Query: 182 YSSLISGLFKEGKSEDAVRLWKEMSEKGCKPNVVVYGAFIDGLCREGRPDEAKEILDEML 241
           Y++L+ G  ++G   +A R+ +EM++ G  P+VV Y A I+G C  G+ ++A  +L++M 
Sbjct: 383 YTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMK 442

Query: 242 INGCLPNAFTYSTLMNGFFKKGDSQKAILVWKETMNQDSRHNEVCCSVLLNGLCEDGKIR 301
             G  P+  +YST+++GF +  D  +A+ V +E + +  + + +  S L+ G CE  + +
Sbjct: 443 EKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTK 502

Query: 302 EALIVWKHMLSEGLKPDVVAYSSMIKGLCDAGYVDQGLKLFYEMQCQEPKSQPDVITYNI 361
           EA  +++ ML  GL PD   Y+++I   C  G +++ L+L  EM   E    PDV+TY++
Sbjct: 503 EACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEM--VEKGVLPDVVTYSV 562

Query: 362 IFNALCKEGNLTRAIDLL 380
           + N L K+     A  LL
Sbjct: 563 LINGLNKQSRTREAKRLL 578

[Close]

BLAST of MS022511 vs. TAIR 10
Match: AT3G04760.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 265.4 bits (677), Expect = 7.4e-71
Identity = 130/398 (32.66%), Postives = 213/398 (53.52%), Query Frame = 0


Query: 1   QPNTLTYNLIIKALCKLGQIERAIETFREMPLKSCNPDVFTYSTLMDGLCKERRIDEAVF 60
           QP+   YN +I   CK+ +I+ A      M  K  +PD  TY+ ++  LC   ++D A+ 
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214

Query: 61  LLDEMQIEGCLPNPVTFNVLIDAICKNGDLSRAAKLLDNMFLKGCVPNEVTYNTLIHGLC 120
           +L+++  + C P  +T+ +LI+A    G +  A KL+D M  +G  P+  TYNT+I G+C
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274

Query: 121 LKGKFDKALSLLDKMVSSKCVPNEVTYGIIINGLVKQGRAEDGAQILVSMEERGHKANEY 180
            +G  D+A  ++  +    C P+ ++Y I++  L+ QG+ E+G +++  M       N  
Sbjct: 275 KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334

Query: 181 IYSSLISGLFKEGKSEDAVRLWKEMSEKGCKPNVVVYGAFIDGLCREGRPDEAKEILDEM 240
            YS LI+ L ++GK E+A+ L K M EKG  P+   Y   I   CREGR D A E L+ M
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394

Query: 241 LINGCLPNAFTYSTLMNGFFKKGDSQKAILVWKETMNQDSRHNEVCCSVLLNGLCEDGKI 300
           + +GCLP+   Y+T++    K G + +A+ ++ +        N    + + + L   G  
Sbjct: 395 ISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDK 454

Query: 301 REALIVWKHMLSEGLKPDVVAYSSMIKGLCDAGYVDQGLKLFYEMQCQEPKSQPDVITYN 360
             AL +   M+S G+ PD + Y+SMI  LC  G VD+  +L  +M+  E    P V+TYN
Sbjct: 455 IRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCE--FHPSVVTYN 514

Query: 361 IIFNALCKEGNLTRAIDLLNGMLDRGCDPDLATCNIFL 399
           I+    CK   +  AI++L  M+  GC P+  T  + +
Sbjct: 515 IVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLI 550

The following BLAST results are available for this feature:

BLAST of MS022511 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022146575.1	8.4e-234	98.74	pentatricopeptide repeat-containing protein At4g20090 [Momordica charantia] >XP_...	[more]
XP_022926533.1	5.7e-214	89.20	pentatricopeptide repeat-containing protein At4g20090 [Cucurbita moschata] >XP_0...	[more]
XP_023518291.1	7.4e-214	89.20	pentatricopeptide repeat-containing protein At4g20090 [Cucurbita pepo subsp. pep...	[more]
XP_023003433.1	1.6e-213	88.94	pentatricopeptide repeat-containing protein At4g20090 [Cucurbita maxima] >XP_023...	[more]
KAG6594382.1	4.8e-213	88.94	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]

BLAST of MS022511 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O49436	4.3e-164	66.33	Pentatricopeptide repeat-containing protein At4g20090 OS=Arabidopsis thaliana OX...	[more]
Q3EDF8	2.4e-74	33.50	Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX...	[more]
Q9FIX3	3.6e-70	35.19	Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX...	[more]
Q9CAN0	3.6e-70	34.42	Pentatricopeptide repeat-containing protein At1g63130, mitochondrial OS=Arabidop...	[more]
Q9SR00	1.0e-69	32.66	Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidop...	[more]

BLAST of MS022511 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CYY5	4.1e-234	98.74	pentatricopeptide repeat-containing protein At4g20090 OS=Momordica charantia OX=...	[more]
A0A6J1EIB7	2.7e-214	89.20	pentatricopeptide repeat-containing protein At4g20090 OS=Cucurbita moschata OX=3...	[more]
A0A6J1KWH5	8.0e-214	88.94	pentatricopeptide repeat-containing protein At4g20090 OS=Cucurbita maxima OX=366...	[more]
A0A0A0LP34	3.0e-205	85.93	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G238820 PE=4 SV=1	[more]
A0A1S3CAZ3	2.0e-204	85.43	pentatricopeptide repeat-containing protein At4g20090 OS=Cucumis melo OX=3656 GN...	[more]

BLAST of MS022511 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G20090.1	3.0e-165	66.33	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G09900.1	1.7e-75	33.50	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT1G63130.1	2.6e-71	34.42	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G39710.1	2.6e-71	35.19	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G04760.1	7.4e-71	32.66	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 279..346 e-value: 8.7E-17 score: 63.2 coord: 208..278 e-value: 1.6E-21 score: 78.7 coord: 347..398 e-value: 7.2E-13 score: 50.5
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 90..207 e-value: 1.8E-37 score: 131.4
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 1..89 e-value: 7.4E-31 score: 108.9
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 181..210 e-value: 4.2E-8 score: 32.9
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 69..100 e-value: 9.7E-11 score: 41.2
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 354..398 e-value: 2.9E-12 score: 46.6 coord: 2..51 e-value: 7.8E-18 score: 64.4 coord: 212..261 e-value: 1.0E-15 score: 57.7 coord: 107..156 e-value: 2.6E-17 score: 62.7 coord: 283..331 e-value: 1.2E-13 score: 51.0
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 40..73 e-value: 1.5E-10 score: 38.5 coord: 180..214 e-value: 2.4E-11 score: 41.1 coord: 215..249 e-value: 3.4E-10 score: 37.5 coord: 145..178 e-value: 5.9E-7 score: 27.3 coord: 75..109 e-value: 4.5E-8 score: 30.8 coord: 110..144 e-value: 1.2E-12 score: 45.2 coord: 357..390 e-value: 5.7E-10 score: 36.7 coord: 6..39 e-value: 7.4E-9 score: 33.3 coord: 285..319 e-value: 5.9E-7 score: 27.3 coord: 320..347 e-value: 5.9E-6 score: 24.1 coord: 250..279 e-value: 3.6E-5 score: 21.7
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 318..352 score: 10.435215
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 73..107 score: 12.528824
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 355..389 score: 12.737088
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 178..212 score: 13.526301
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 38..72 score: 13.405727
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 213..247 score: 13.274192
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 143..177 score: 10.676364
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 3..37 score: 12.550746
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 248..282 score: 8.900633
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 108..142 score: 13.624953
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 283..317 score: 11.73961
None	No IPR available	PANTHER	PTHR45613:SF99	PPR CONTAINING PLANT-LIKE PROTEIN	coord: 1..398
None	No IPR available	PANTHER	PTHR45613	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 1..398
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 116..316

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS022511.1	MS022511.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding