Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACACAAATGTGGCTTCTCTGGTGGCCGAAGACCGTCTCCGCCGGCGGCAAAACTACCACATCCTCCGCCACCGCCGCGGTAACTGCGACTTCCCTCGCCAAAAAGGCGTCCTCCTCCTCCTCTCACTGCAACTGCGTCGCCAAACTGTTGCGGAAACTGAAGAAACGAGGGCGAGTTTTATGCAGCACTAGTGGAGAGAGCAGCGCGTTCCAGTGCCGGTACGATCCGCTGAGCTACTCTCTCAACTTCGACACCAGCGGCTGCGGAAGCTTGTTAGACGAAGATTACTATCAGTTCTGCGCGTTCTCTTCCAGATTCGCGTCAAATCCAGGAAATGCTTCTCATTCTGTCCCTGATGTAACAGTCACTGCTTCGCGC
mRNA sequence
ATGACACAAATGTGGCTTCTCTGGTGGCCGAAGACCGTCTCCGCCGGCGGCAAAACTACCACATCCTCCGCCACCGCCGCGGTAACTGCGACTTCCCTCGCCAAAAAGGCGTCCTCCTCCTCCTCTCACTGCAACTGCGTCGCCAAACTGTTGCGGAAACTGAAGAAACGAGGGCGAGTTTTATGCAGCACTAGTGGAGAGAGCAGCGCGTTCCAGTGCCGGTACGATCCGCTGAGCTACTCTCTCAACTTCGACACCAGCGGCTGCGGAAGCTTGTTAGACGAAGATTACTATCAGTTCTGCGCGTTCTCTTCCAGATTCGCGTCAAATCCAGGAAATGCTTCTCATTCTGTCCCTGATGTAACAGTCACTGCTTCGCGC
Coding sequence (CDS)
ATGACACAAATGTGGCTTCTCTGGTGGCCGAAGACCGTCTCCGCCGGCGGCAAAACTACCACATCCTCCGCCACCGCCGCGGTAACTGCGACTTCCCTCGCCAAAAAGGCGTCCTCCTCCTCCTCTCACTGCAACTGCGTCGCCAAACTGTTGCGGAAACTGAAGAAACGAGGGCGAGTTTTATGCAGCACTAGTGGAGAGAGCAGCGCGTTCCAGTGCCGGTACGATCCGCTGAGCTACTCTCTCAACTTCGACACCAGCGGCTGCGGAAGCTTGTTAGACGAAGATTACTATCAGTTCTGCGCGTTCTCTTCCAGATTCGCGTCAAATCCAGGAAATGCTTCTCATTCTGTCCCTGATGTAACAGTCACTGCTTCGCGC
Protein sequence
MTQMWLLWWPKTVSAGGKTTTSSATAAVTATSLAKKASSSSSHCNCVAKLLRKLKKRGRVLCSTSGESSAFQCRYDPLSYSLNFDTSGCGSLLDEDYYQFCAFSSRFASNPGNASHSVPDVTVTASR
Homology
BLAST of MS022497 vs. NCBI nr
Match:
XP_022146664.1 (uncharacterized protein LOC111015812 [Momordica charantia])
HSP 1 Score: 241.9 bits (616), Expect = 3.0e-60
Identity = 125/127 (98.43%), Postives = 125/127 (98.43%), Query Frame = 0
Query: 1 MTQMWLLWWPKTVSAGGKTTTSSATAAVTATSLAKKASSSSSHCNCVAKLLRKLKKRGRV 60
MTQMWLLWWPKTVSAGGKTTTSSATAAVTATSLAKKA S SSHCNCVAKLLRKLKKRGRV
Sbjct: 1 MTQMWLLWWPKTVSAGGKTTTSSATAAVTATSLAKKA-SPSSHCNCVAKLLRKLKKRGRV 60
Query: 61 LCSTSGESSAFQCRYDPLSYSLNFDTSGCGSLLDEDYYQFCAFSSRFASNPGNASHSVPD 120
LCSTSGESSAFQCRYDPLSYSLNFDTSGCGSLLDEDYYQFCAFSSRFASNPGNASHSVPD
Sbjct: 61 LCSTSGESSAFQCRYDPLSYSLNFDTSGCGSLLDEDYYQFCAFSSRFASNPGNASHSVPD 120
Query: 121 VTVTASR 128
VTVTASR
Sbjct: 121 VTVTASR 126
BLAST of MS022497 vs. NCBI nr
Match:
KAG7026395.1 (hypothetical protein SDJN02_10395, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 198.4 bits (503), Expect = 3.8e-47
Identity = 106/128 (82.81%), Postives = 110/128 (85.94%), Query Frame = 0
Query: 1 MTQMWLLWWPKTVSAGGKTTTSSATAAVTATSLAKKASSSSSHCNCVAKLLRKLKKRGRV 60
M QMWLLWWPK SA KT+TSSATAAVTATSLA K SSSHCN +AKLLRKLKKRGRV
Sbjct: 1 MAQMWLLWWPKNSSAAAKTSTSSATAAVTATSLATKV--SSSHCNRIAKLLRKLKKRGRV 60
Query: 61 LCSTSGESSA-FQCRYDPLSYSLNFDTSGCGSLLDEDYYQFCAFSSRFASNPGNASHSVP 120
LCST+GESS+ FQCRYDPLSYSLNFDTSGCGSLLDE YYQFCAFSSRFASNPG S P
Sbjct: 61 LCSTTGESSSNFQCRYDPLSYSLNFDTSGCGSLLDEHYYQFCAFSSRFASNPGTVSRPAP 120
Query: 121 DVTVTASR 128
D TVTASR
Sbjct: 121 DGTVTASR 126
BLAST of MS022497 vs. NCBI nr
Match:
XP_023518962.1 (uncharacterized protein LOC111782330 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 196.8 bits (499), Expect = 1.1e-46
Identity = 105/128 (82.03%), Postives = 109/128 (85.16%), Query Frame = 0
Query: 1 MTQMWLLWWPKTVSAGGKTTTSSATAAVTATSLAKKASSSSSHCNCVAKLLRKLKKRGRV 60
M QMWLLWWPK SA KT+TSSAT AVTATSLA K SSSHCN +AKLLRKLKKRGRV
Sbjct: 1 MAQMWLLWWPKNSSAAAKTSTSSATGAVTATSLATKV--SSSHCNRIAKLLRKLKKRGRV 60
Query: 61 LCSTSGESSA-FQCRYDPLSYSLNFDTSGCGSLLDEDYYQFCAFSSRFASNPGNASHSVP 120
LCST+GESS+ FQCRYDPLSYSLNFDTSGCGSLLDE YYQFCAFSSRFASNPG S P
Sbjct: 61 LCSTTGESSSNFQCRYDPLSYSLNFDTSGCGSLLDEHYYQFCAFSSRFASNPGTVSRPAP 120
Query: 121 DVTVTASR 128
D TVTASR
Sbjct: 121 DGTVTASR 126
BLAST of MS022497 vs. NCBI nr
Match:
XP_022926526.1 (uncharacterized protein LOC111433647 [Cucurbita moschata])
HSP 1 Score: 196.8 bits (499), Expect = 1.1e-46
Identity = 105/128 (82.03%), Postives = 109/128 (85.16%), Query Frame = 0
Query: 1 MTQMWLLWWPKTVSAGGKTTTSSATAAVTATSLAKKASSSSSHCNCVAKLLRKLKKRGRV 60
M QMWLLWWPK SA KT+TSSATAAVTATSLA K SSSHCN +AKLLRKLKKRGRV
Sbjct: 1 MAQMWLLWWPKNSSAAAKTSTSSATAAVTATSLATKV--SSSHCNRIAKLLRKLKKRGRV 60
Query: 61 LCSTSGESSA-FQCRYDPLSYSLNFDTSGCGSLLDEDYYQFCAFSSRFASNPGNASHSVP 120
LCST+GESS+ FQCRYDPLSYSLNFDTSGCGSLLDE YYQFC FSSRFASNPG S P
Sbjct: 61 LCSTTGESSSNFQCRYDPLSYSLNFDTSGCGSLLDEHYYQFCTFSSRFASNPGTVSRPAP 120
Query: 121 DVTVTASR 128
D TVTASR
Sbjct: 121 DGTVTASR 126
BLAST of MS022497 vs. NCBI nr
Match:
KAG6594391.1 (hypothetical protein SDJN03_10944, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 194.9 bits (494), Expect = 4.2e-46
Identity = 104/125 (83.20%), Postives = 108/125 (86.40%), Query Frame = 0
Query: 4 MWLLWWPKTVSAGGKTTTSSATAAVTATSLAKKASSSSSHCNCVAKLLRKLKKRGRVLCS 63
MWLLWWPK SA KT+TSSATAAVTATSLA K SSSHCN +AKLLRKLKKRGRVLCS
Sbjct: 1 MWLLWWPKNSSAAAKTSTSSATAAVTATSLATKV--SSSHCNRIAKLLRKLKKRGRVLCS 60
Query: 64 TSGESSA-FQCRYDPLSYSLNFDTSGCGSLLDEDYYQFCAFSSRFASNPGNASHSVPDVT 123
T+GESS+ FQCRYDPLSYSLNFDTSGCGSLLDE YYQFCAFSSRFASNPG S PD T
Sbjct: 61 TTGESSSNFQCRYDPLSYSLNFDTSGCGSLLDEHYYQFCAFSSRFASNPGTVSRPAPDGT 120
Query: 124 VTASR 128
VTASR
Sbjct: 121 VTASR 123
BLAST of MS022497 vs. ExPASy TrEMBL
Match:
A0A6J1CYQ9 (uncharacterized protein LOC111015812 OS=Momordica charantia OX=3673 GN=LOC111015812 PE=4 SV=1)
HSP 1 Score: 241.9 bits (616), Expect = 1.5e-60
Identity = 125/127 (98.43%), Postives = 125/127 (98.43%), Query Frame = 0
Query: 1 MTQMWLLWWPKTVSAGGKTTTSSATAAVTATSLAKKASSSSSHCNCVAKLLRKLKKRGRV 60
MTQMWLLWWPKTVSAGGKTTTSSATAAVTATSLAKKA S SSHCNCVAKLLRKLKKRGRV
Sbjct: 1 MTQMWLLWWPKTVSAGGKTTTSSATAAVTATSLAKKA-SPSSHCNCVAKLLRKLKKRGRV 60
Query: 61 LCSTSGESSAFQCRYDPLSYSLNFDTSGCGSLLDEDYYQFCAFSSRFASNPGNASHSVPD 120
LCSTSGESSAFQCRYDPLSYSLNFDTSGCGSLLDEDYYQFCAFSSRFASNPGNASHSVPD
Sbjct: 61 LCSTSGESSAFQCRYDPLSYSLNFDTSGCGSLLDEDYYQFCAFSSRFASNPGNASHSVPD 120
Query: 121 VTVTASR 128
VTVTASR
Sbjct: 121 VTVTASR 126
BLAST of MS022497 vs. ExPASy TrEMBL
Match:
A0A6J1EF60 (uncharacterized protein LOC111433647 OS=Cucurbita moschata OX=3662 GN=LOC111433647 PE=4 SV=1)
HSP 1 Score: 196.8 bits (499), Expect = 5.4e-47
Identity = 105/128 (82.03%), Postives = 109/128 (85.16%), Query Frame = 0
Query: 1 MTQMWLLWWPKTVSAGGKTTTSSATAAVTATSLAKKASSSSSHCNCVAKLLRKLKKRGRV 60
M QMWLLWWPK SA KT+TSSATAAVTATSLA K SSSHCN +AKLLRKLKKRGRV
Sbjct: 1 MAQMWLLWWPKNSSAAAKTSTSSATAAVTATSLATKV--SSSHCNRIAKLLRKLKKRGRV 60
Query: 61 LCSTSGESSA-FQCRYDPLSYSLNFDTSGCGSLLDEDYYQFCAFSSRFASNPGNASHSVP 120
LCST+GESS+ FQCRYDPLSYSLNFDTSGCGSLLDE YYQFC FSSRFASNPG S P
Sbjct: 61 LCSTTGESSSNFQCRYDPLSYSLNFDTSGCGSLLDEHYYQFCTFSSRFASNPGTVSRPAP 120
Query: 121 DVTVTASR 128
D TVTASR
Sbjct: 121 DGTVTASR 126
BLAST of MS022497 vs. ExPASy TrEMBL
Match:
A0A6J1KS95 (uncharacterized protein LOC111497167 OS=Cucurbita maxima OX=3661 GN=LOC111497167 PE=4 SV=1)
HSP 1 Score: 192.2 bits (487), Expect = 1.3e-45
Identity = 102/128 (79.69%), Postives = 108/128 (84.38%), Query Frame = 0
Query: 1 MTQMWLLWWPKTVSAGGKTTTSSATAAVTATSLAKKASSSSSHCNCVAKLLRKLKKRGRV 60
M QMWLLWWPK SA K++T SAT AV+ATSLA K SSSHCN +AKLLRKLKKRGRV
Sbjct: 1 MAQMWLLWWPKNSSAAAKSSTPSATGAVSATSLASKV--SSSHCNRIAKLLRKLKKRGRV 60
Query: 61 LCSTSGESSA-FQCRYDPLSYSLNFDTSGCGSLLDEDYYQFCAFSSRFASNPGNASHSVP 120
LCST+GESS+ FQCRYDPLSYSLNFDTSGCGSLLDE YYQFCAFSSRFASNPG S P
Sbjct: 61 LCSTTGESSSNFQCRYDPLSYSLNFDTSGCGSLLDEHYYQFCAFSSRFASNPGTVSRPAP 120
Query: 121 DVTVTASR 128
D TVTASR
Sbjct: 121 DGTVTASR 126
BLAST of MS022497 vs. ExPASy TrEMBL
Match:
A0A6J1EFV9 (uncharacterized protein LOC111433012 OS=Cucurbita moschata OX=3662 GN=LOC111433012 PE=4 SV=1)
HSP 1 Score: 178.7 bits (452), Expect = 1.5e-41
Identity = 100/126 (79.37%), Postives = 105/126 (83.33%), Query Frame = 0
Query: 4 MWLLWWPK-TVSAGGKTTTSSATAAVTATSLAKKASSSSSHCNCVAKLLRKLKKRGRVLC 63
MWLLWWPK SA KT TSS AAVTATSLA+KA SSS+CNC AKLLRKLKKR RVL
Sbjct: 1 MWLLWWPKNNASADAKTCTSS--AAVTATSLARKA--SSSNCNCFAKLLRKLKKRSRVLR 60
Query: 64 STSGESSA-FQCRYDPLSYSLNFDTSGCGSLLDEDYYQFCAFSSRFASNPGNASHSVPDV 123
ST+GESS+ FQCRYDPLSYSLNFDTSGCG LLDE YYQ+CAFSSRFASNPGN SHS P
Sbjct: 61 STAGESSSTFQCRYDPLSYSLNFDTSGCGGLLDEHYYQYCAFSSRFASNPGNVSHSAPVA 120
Query: 124 TVTASR 128
TVT SR
Sbjct: 121 TVTTSR 122
BLAST of MS022497 vs. ExPASy TrEMBL
Match:
A0A6J1IQV7 (uncharacterized protein LOC111477613 OS=Cucurbita maxima OX=3661 GN=LOC111477613 PE=4 SV=1)
HSP 1 Score: 177.6 bits (449), Expect = 3.4e-41
Identity = 100/126 (79.37%), Postives = 106/126 (84.13%), Query Frame = 0
Query: 4 MWLLWWPK-TVSAGGKTTTSSATAAVTATSLAKKASSSSSHCNCVAKLLRKLKKRGRVLC 63
MWLLWWPK S+G KT TSS AAVTATSLA+KA SSS+ NC AKLLRKLKKR RVL
Sbjct: 1 MWLLWWPKNNASSGAKTCTSS--AAVTATSLARKA--SSSNYNCFAKLLRKLKKRSRVLR 60
Query: 64 STSGESSA-FQCRYDPLSYSLNFDTSGCGSLLDEDYYQFCAFSSRFASNPGNASHSVPDV 123
ST+GESS+ FQCRYDPLSYSLNFDTSGCG LLDE YYQ+CAFSSRFASNPGN SHS P V
Sbjct: 61 STAGESSSTFQCRYDPLSYSLNFDTSGCGGLLDEHYYQYCAFSSRFASNPGNVSHSAPVV 120
Query: 124 TVTASR 128
TVT SR
Sbjct: 121 TVTTSR 122
BLAST of MS022497 vs. TAIR 10
Match:
AT4G19980.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: root, pedicel; EXPRESSED DURING: 4 anthesis; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )
HSP 1 Score: 82.0 bits (201), Expect = 3.7e-16
Identity = 50/102 (49.02%), Postives = 70/102 (68.63%), Query Frame = 0
Query: 27 AVTATSLAKKAS--SSSSHC--NCVAKLLRKLKKRGRVLCSTS---GESSAFQCRYDPLS 86
A TAT++ KK++ + + +C C+A+L+RKLKK+GR+L +TS + S+ QCRYDP+S
Sbjct: 12 ATTATAVTKKSNVPTPTPNCCVTCLARLIRKLKKKGRLLLATSTARRQGSSLQCRYDPMS 71
Query: 87 YSLNFDTSGCGSLL-DEDYY-QFCAFSSRFASNPGNASHSVP 120
YSLNFD CG+L DEDYY +F AFSSR+ + N P
Sbjct: 72 YSLNFDGGACGTLPDDEDYYLRFYAFSSRYVTTTNNIRKRPP 113
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_022146664.1 | 3.0e-60 | 98.43 | uncharacterized protein LOC111015812 [Momordica charantia] | [more] |
| KAG7026395.1 | 3.8e-47 | 82.81 | hypothetical protein SDJN02_10395, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
| XP_023518962.1 | 1.1e-46 | 82.03 | uncharacterized protein LOC111782330 [Cucurbita pepo subsp. pepo] | [more] |
| XP_022926526.1 | 1.1e-46 | 82.03 | uncharacterized protein LOC111433647 [Cucurbita moschata] | [more] |
| KAG6594391.1 | 4.2e-46 | 83.20 | hypothetical protein SDJN03_10944, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1CYQ9 | 1.5e-60 | 98.43 | uncharacterized protein LOC111015812 OS=Momordica charantia OX=3673 GN=LOC111015... | [more] |
| A0A6J1EF60 | 5.4e-47 | 82.03 | uncharacterized protein LOC111433647 OS=Cucurbita moschata OX=3662 GN=LOC1114336... | [more] |
| A0A6J1KS95 | 1.3e-45 | 79.69 | uncharacterized protein LOC111497167 OS=Cucurbita maxima OX=3661 GN=LOC111497167... | [more] |
| A0A6J1EFV9 | 1.5e-41 | 79.37 | uncharacterized protein LOC111433012 OS=Cucurbita moschata OX=3662 GN=LOC1114330... | [more] |
| A0A6J1IQV7 | 3.4e-41 | 79.37 | uncharacterized protein LOC111477613 OS=Cucurbita maxima OX=3661 GN=LOC111477613... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT4G19980.1 | 3.7e-16 | 49.02 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |
