MS022268 (gene) Bitter gourd (TR) v1

Overview


Name	MS022268
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Pentatricopeptide repeat-containing protein
Location	scaffold47: 2137374 .. 2138453 (+)
RNA-Seq Expression	MS022268
Synteny	MS022268

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGTTGCAATTGCAATCTCGCCTTCGAATTTCGAAGATTGTGTCTTCATCAATTTGGAAGTGCGAAAGGCAGCTTCCTCTGCTCCACGATTCACTGCGAACGCAGGATTTCTCGCTCTTGCCGACGCAATCTCGCTGTTTCAGCTCCAATTCCATGGACGACGATTGGGCCATCTCAAATTCCGAGCCGAGGAGCAGCCCGCCGCACCGGCGTTCTCCTCCGGATTCCCGCGAACCTCGTCGAGTTCCTAGATTCTCCGATGGAGTATCTGCTTCTTACCCTGGGGATGATCGGAACCGACGGATTAATAAACGTTCGGAAGGTTCCTCGTTTCGATTTGATAATGAAGGCGGCATTTCGCGGCAAAGGAGTGAGTTTCTGTCTCAGAAGGATTTTAGCTTTCTTGAAAAGTTCAAGCTGAATACTGATAATCAGAGTAGTAGCAAAGAGAAGACCGAGCAGAGCTCTGCTCCTCGGTTTTCTGAATCTGTCCAGGAGAAGCAGTCGCAACCGCAGCGTCCTCCTGAAGCCGATGAGATATTCAAGAAAATGAAGGAGACGGGTCTCATTCCTAATGCTGTCGCCATGCTTGATGGGCTGTGCAAAGATGGGCTTATCCAAGAAGCAATGAAACTCTTTGGTTTGATTCGTGAGAAGGGTACAATTCCAGAAGTTGTGATTTACACCGCTGTGGTTGATGGGTTTTGCAAGGCCGAGAAGCTTGATGAAGCCATCAGGATTTTCAGAAAAATGCAGAAAAATGGCATTTCTCCTAATGCTTTCAGTTTTGGCGTCTTGATACAGGGACTGTACAAATGCAATAAATTAGAGGAAGCCATAGGATTTTGCATTGAGATGTTAGAATCTGGGCATTCTCCAAATGTAACCACTTTCGTTGGCCTAGTTGACGAGTTATGCAAAGAAAGGGGAACGGAAGAAGCTCGGAGTGTCATAGAAACCTTAAAACAAAAAGGGTTCTTGCTGAATGAGAAAGCTTTAAGAGAATTTCTGAACAAAAGAGCCCCCTTTTCACCAAATATCTGGGAAGCAATCTTTGGGAAAAAAACGAAAGAATTTTTC

mRNA sequence

CAGTTGCAATTGCAATCTCGCCTTCGAATTTCGAAGATTGTGTCTTCATCAATTTGGAAGTGCGAAAGGCAGCTTCCTCTGCTCCACGATTCACTGCGAACGCAGGATTTCTCGCTCTTGCCGACGCAATCTCGCTGTTTCAGCTCCAATTCCATGGACGACGATTGGGCCATCTCAAATTCCGAGCCGAGGAGCAGCCCGCCGCACCGGCGTTCTCCTCCGGATTCCCGCGAACCTCGTCGAGTTCCTAGATTCTCCGATGGAGTATCTGCTTCTTACCCTGGGGATGATCGGAACCGACGGATTAATAAACGTTCGGAAGGTTCCTCGTTTCGATTTGATAATGAAGGCGGCATTTCGCGGCAAAGGAGTGAGTTTCTGTCTCAGAAGGATTTTAGCTTTCTTGAAAAGTTCAAGCTGAATACTGATAATCAGAGTAGTAGCAAAGAGAAGACCGAGCAGAGCTCTGCTCCTCGGTTTTCTGAATCTGTCCAGGAGAAGCAGTCGCAACCGCAGCGTCCTCCTGAAGCCGATGAGATATTCAAGAAAATGAAGGAGACGGGTCTCATTCCTAATGCTGTCGCCATGCTTGATGGGCTGTGCAAAGATGGGCTTATCCAAGAAGCAATGAAACTCTTTGGTTTGATTCGTGAGAAGGGTACAATTCCAGAAGTTGTGATTTACACCGCTGTGGTTGATGGGTTTTGCAAGGCCGAGAAGCTTGATGAAGCCATCAGGATTTTCAGAAAAATGCAGAAAAATGGCATTTCTCCTAATGCTTTCAGTTTTGGCGTCTTGATACAGGGACTGTACAAATGCAATAAATTAGAGGAAGCCATAGGATTTTGCATTGAGATGTTAGAATCTGGGCATTCTCCAAATGTAACCACTTTCGTTGGCCTAGTTGACGAGTTATGCAAAGAAAGGGGAACGGAAGAAGCTCGGAGTGTCATAGAAACCTTAAAACAAAAAGGGTTCTTGCTGAATGAGAAAGCTTTAAGAGAATTTCTGAACAAAAGAGCCCCCTTTTCACCAAATATCTGGGAAGCAATCTTTGGGAAAAAAACGAAAGAATTTTTC

Coding sequence (CDS)

CAGTTGCAATTGCAATCTCGCCTTCGAATTTCGAAGATTGTGTCTTCATCAATTTGGAAGTGCGAAAGGCAGCTTCCTCTGCTCCACGATTCACTGCGAACGCAGGATTTCTCGCTCTTGCCGACGCAATCTCGCTGTTTCAGCTCCAATTCCATGGACGACGATTGGGCCATCTCAAATTCCGAGCCGAGGAGCAGCCCGCCGCACCGGCGTTCTCCTCCGGATTCCCGCGAACCTCGTCGAGTTCCTAGATTCTCCGATGGAGTATCTGCTTCTTACCCTGGGGATGATCGGAACCGACGGATTAATAAACGTTCGGAAGGTTCCTCGTTTCGATTTGATAATGAAGGCGGCATTTCGCGGCAAAGGAGTGAGTTTCTGTCTCAGAAGGATTTTAGCTTTCTTGAAAAGTTCAAGCTGAATACTGATAATCAGAGTAGTAGCAAAGAGAAGACCGAGCAGAGCTCTGCTCCTCGGTTTTCTGAATCTGTCCAGGAGAAGCAGTCGCAACCGCAGCGTCCTCCTGAAGCCGATGAGATATTCAAGAAAATGAAGGAGACGGGTCTCATTCCTAATGCTGTCGCCATGCTTGATGGGCTGTGCAAAGATGGGCTTATCCAAGAAGCAATGAAACTCTTTGGTTTGATTCGTGAGAAGGGTACAATTCCAGAAGTTGTGATTTACACCGCTGTGGTTGATGGGTTTTGCAAGGCCGAGAAGCTTGATGAAGCCATCAGGATTTTCAGAAAAATGCAGAAAAATGGCATTTCTCCTAATGCTTTCAGTTTTGGCGTCTTGATACAGGGACTGTACAAATGCAATAAATTAGAGGAAGCCATAGGATTTTGCATTGAGATGTTAGAATCTGGGCATTCTCCAAATGTAACCACTTTCGTTGGCCTAGTTGACGAGTTATGCAAAGAAAGGGGAACGGAAGAAGCTCGGAGTGTCATAGAAACCTTAAAACAAAAAGGGTTCTTGCTGAATGAGAAAGCTTTAAGAGAATTTCTGAACAAAAGAGCCCCCTTTTCACCAAATATCTGGGAAGCAATCTTTGGGAAAAAAACGAAAGAATTTTTC

Protein sequence

QLQLQSRLRISKIVSSSIWKCERQLPLLHDSLRTQDFSLLPTQSRCFSSNSMDDDWAISNSEPRSSPPHRRSPPDSREPRRVPRFSDGVSASYPGDDRNRRINKRSEGSSFRFDNEGGISRQRSEFLSQKDFSFLEKFKLNTDNQSSSKEKTEQSSAPRFSESVQEKQSQPQRPPEADEIFKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVTTFVGLVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAIFGKKTKEFF

Homology

[Close]

BLAST of MS022268 vs. NCBI nr
Match: XP_022136091.1 (pentatricopeptide repeat-containing protein At4g38150 [Momordica charantia] >XP_022136092.1 pentatricopeptide repeat-containing protein At4g38150 [Momordica charantia])

HSP 1 Score: 695.3 bits (1793), Expect = 2.8e-196
Identity = 356/360 (98.89%), Postives = 359/360 (99.72%), Query Frame = 0


Query: 1   QLQLQSRLRISKIVSSSIWKCERQLPLLHDSLRTQDFSLLPTQSRCFSSNSMDDDWAISN 60
           QLQLQSRLR+SKIVSSSIWKCERQLPLLHDSLRTQDFSLLPTQSRCFSSNSMDDDWAISN
Sbjct: 5   QLQLQSRLRMSKIVSSSIWKCERQLPLLHDSLRTQDFSLLPTQSRCFSSNSMDDDWAISN 64

Query: 61  SEPRSSPPHRRSPPDSREPRRVPRFSDGVSASYPGDDRNRRINKRSEGSSFRFDNEGGIS 120
           SEPRS+PPHRRSPPDSREPRRVP+FSDGVSASYPGDDRNRRINKRSEGSSFRFDNEGGIS
Sbjct: 65  SEPRSNPPHRRSPPDSREPRRVPKFSDGVSASYPGDDRNRRINKRSEGSSFRFDNEGGIS 124

Query: 121 RQRSEFLSQKDFSFLEKFKLNTDNQSSSKEKTEQSSAPRFSESVQEKQSQPQRPPEADEI 180
           RQRSEFLSQKDFSFLEKFKLNTDNQSSSKEKTEQSSAPRFSESVQEKQSQPQRPPEADEI
Sbjct: 125 RQRSEFLSQKDFSFLEKFKLNTDNQSSSKEKTEQSSAPRFSESVQEKQSQPQRPPEADEI 184

Query: 181 FKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEK 240
           FKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEK
Sbjct: 185 FKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEK 244

Query: 241 LDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVTTFVG 300
           LDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVTT VG
Sbjct: 245 LDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVTTLVG 304

Query: 301 LVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAIFGKKTKEFF 360
           LVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAIFGKKTKEFF
Sbjct: 305 LVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAIFGKKTKEFF 364

[Close]

BLAST of MS022268 vs. NCBI nr
Match: XP_022969144.1 (pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita maxima] >XP_022969146.1 pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita maxima])

HSP 1 Score: 565.5 bits (1456), Expect = 3.4e-157
Identity = 290/360 (80.56%), Postives = 318/360 (88.33%), Query Frame = 0


Query: 1   QLQLQSRLRISKIVSSSIWKCERQLPLLHDSLRTQDFSLLPTQSRCFSSNSMDDDWAISN 60
           Q+QLQSRLR+SKI+ S+I   ER  PLLHD LRT D SL P +SRCFSSNSMDDDW  S 
Sbjct: 5   QMQLQSRLRVSKILFSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFSR 64

Query: 61  SEPRSSPPHRRSPPDSREPRRVPRFSDGVSASYPGDDRNRRINKRSEGSSFRFDNEGGIS 120
           SEPRSSPP RRSPPD RE RRVP+F+  VSA YP D+RN+R N+  EGS  RF NEG +S
Sbjct: 65  SEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRFNRHWEGSESRFANEGPMS 124

Query: 121 RQRSEFLSQKDFSFLEKFKLNTDNQSSSKEKTEQSSAPRFSESVQEKQSQPQRPPEADEI 180
           R+RSE LSQKDFSFLEKFKLNTDN S+S EKTE SS+ +FSES+Q KQSQPQ PPEADEI
Sbjct: 125 RRRSESLSQKDFSFLEKFKLNTDNLSTSTEKTEPSSSAQFSESMQGKQSQPQCPPEADEI 184

Query: 181 FKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEK 240
           F+KMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVV+YTAVVDGFCKAE 
Sbjct: 185 FRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEN 244

Query: 241 LDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVTTFVG 300
           LDEAIRIFRKMQ NGISPNAFS+GVLIQGLYKC KLE+A+ FCIEMLESGHSPN+TTFVG
Sbjct: 245 LDEAIRIFRKMQNNGISPNAFSYGVLIQGLYKCKKLEDAVSFCIEMLESGHSPNLTTFVG 304

Query: 301 LVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAIFGKKTKEFF 360
           L+DELCKE+G +EA +VIETLKQKGFL+NEKALREFLNKRAPFSP+IWE IFGKKTKEFF
Sbjct: 305 LIDELCKEKGVDEAHTVIETLKQKGFLINEKALREFLNKRAPFSPHIWELIFGKKTKEFF 364

[Close]

BLAST of MS022268 vs. NCBI nr
Match: XP_023554525.1 (pentatricopeptide repeat-containing protein At4g38150-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023554526.1 pentatricopeptide repeat-containing protein At4g38150-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 562.8 bits (1449), Expect = 2.2e-156
Identity = 288/360 (80.00%), Postives = 320/360 (88.89%), Query Frame = 0


Query: 1   QLQLQSRLRISKIVSSSIWKCERQLPLLHDSLRTQDFSLLPTQSRCFSSNSMDDDWAISN 60
           Q+QLQSRLR+SKI+SS+I   ER  PLLHD LRT D SL P +SRCFSSNSMDDDW  S 
Sbjct: 5   QMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFSR 64

Query: 61  SEPRSSPPHRRSPPDSREPRRVPRFSDGVSASYPGDDRNRRINKRSEGSSFRFDNEGGIS 120
           SEPRSSPP RRSPPD RE RRVP+F+   SA YP D+RN+R N+ SEGSS RF NEG +S
Sbjct: 65  SEPRSSPPQRRSPPDPREARRVPKFAGEGSAPYPEDNRNQRFNRHSEGSSSRFANEGPMS 124

Query: 121 RQRSEFLSQKDFSFLEKFKLNTDNQSSSKEKTEQSSAPRFSESVQEKQSQPQRPPEADEI 180
           R+R+E LSQKDFSFLEKFKLNTDNQS+S EK E SS+ +FSES+Q +QSQPQ PPEADEI
Sbjct: 125 RRRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQFSESMQGEQSQPQCPPEADEI 184

Query: 181 FKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEK 240
           F+KMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVV+YTAVVDGFCKAEK
Sbjct: 185 FRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEK 244

Query: 241 LDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVTTFVG 300
           LDEAIRIFRKMQ NGISPNAFS+G+LIQGLYK  +LE+A+ FCIEMLESGHSPN+TTFVG
Sbjct: 245 LDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCIEMLESGHSPNLTTFVG 304

Query: 301 LVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAIFGKKTKEFF 360
           L+DELCKE+G +EA +VIETLKQKGFL+NEKALREFLNKRAPFSP+IWE IFGKKTKEFF
Sbjct: 305 LIDELCKEKGEDEAHTVIETLKQKGFLINEKALREFLNKRAPFSPHIWELIFGKKTKEFF 364

[Close]

BLAST of MS022268 vs. NCBI nr
Match: KAG7011839.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 561.2 bits (1445), Expect = 6.4e-156
Identity = 287/360 (79.72%), Postives = 317/360 (88.06%), Query Frame = 0


Query: 1   QLQLQSRLRISKIVSSSIWKCERQLPLLHDSLRTQDFSLLPTQSRCFSSNSMDDDWAISN 60
           Q+QLQSRLR+SKI+SS+I   ER  PLLHD LRT D SL P +SRCFSSNSMDDDW  S 
Sbjct: 5   QMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFSK 64

Query: 61  SEPRSSPPHRRSPPDSREPRRVPRFSDGVSASYPGDDRNRRINKRSEGSSFRFDNEGGIS 120
           SEPRSSPP RRSPPD RE RRVP+F+  VSA YP D+RN+R N+ SEGSS RF NEG +S
Sbjct: 65  SEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRFNRHSEGSSSRFANEGPMS 124

Query: 121 RQRSEFLSQKDFSFLEKFKLNTDNQSSSKEKTEQSSAPRFSESVQEKQSQPQRPPEADEI 180
           R R+E LSQKDFSFLEKFKLNTDNQS+S EK E SS+ +FSES+Q KQSQPQ PPEADEI
Sbjct: 125 RPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQFSESMQGKQSQPQCPPEADEI 184

Query: 181 FKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEK 240
           F+KMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVV+YTAVVDGFCKAEK
Sbjct: 185 FRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEK 244

Query: 241 LDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVTTFVG 300
            DEAIRIFRKMQ NGISPNAFS+G+LIQGLYK  +LE+A+ FC EMLESGHSPN+TTFVG
Sbjct: 245 FDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCFEMLESGHSPNLTTFVG 304

Query: 301 LVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAIFGKKTKEFF 360
           L+DELCKE+G +EA +VIETLKQKGFL+NEK LREFLNKRAPFSP+IWE IFGKKTKEFF
Sbjct: 305 LIDELCKEKGVDEAHTVIETLKQKGFLINEKDLREFLNKRAPFSPHIWELIFGKKTKEFF 364

[Close]

BLAST of MS022268 vs. NCBI nr
Match: XP_022952706.1 (pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita moschata] >XP_022952707.1 pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita moschata])

HSP 1 Score: 559.7 bits (1441), Expect = 1.9e-155
Identity = 286/360 (79.44%), Postives = 318/360 (88.33%), Query Frame = 0


Query: 1   QLQLQSRLRISKIVSSSIWKCERQLPLLHDSLRTQDFSLLPTQSRCFSSNSMDDDWAISN 60
           Q+QLQSRLR+SKI+SS+I   ER  PLLHD LRT D SL P +SRCFSSNSMDDDW  S 
Sbjct: 5   QMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFSR 64

Query: 61  SEPRSSPPHRRSPPDSREPRRVPRFSDGVSASYPGDDRNRRINKRSEGSSFRFDNEGGIS 120
           SEPRSSPP RRSPPD RE RRVP+F+  VSA YP D+RN+R N+ SEGSS RF N+G +S
Sbjct: 65  SEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRFNRHSEGSSSRFANDGPMS 124

Query: 121 RQRSEFLSQKDFSFLEKFKLNTDNQSSSKEKTEQSSAPRFSESVQEKQSQPQRPPEADEI 180
           R R+E LSQKDFSFLEKFKLNTDNQS+S EK E SS+ + SES+Q KQSQPQ PPEADEI
Sbjct: 125 RPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQISESMQGKQSQPQCPPEADEI 184

Query: 181 FKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEK 240
           F+KMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVV+YTAVVDGFCKAEK
Sbjct: 185 FRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEK 244

Query: 241 LDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVTTFVG 300
           LDEAIRIFRKMQ NGISPNAFS+G+LIQGLYK  +LE+A+ FCIEMLESGHSPN+TTFVG
Sbjct: 245 LDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCIEMLESGHSPNLTTFVG 304

Query: 301 LVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAIFGKKTKEFF 360
           L+DELCKE+G +EA +VIETLKQKGFL+NEK LR+FLNKRAPFSP+IWE IFGKKTKEFF
Sbjct: 305 LIDELCKEKGVDEAHTVIETLKQKGFLINEKDLRDFLNKRAPFSPHIWELIFGKKTKEFF 364

[Close]

BLAST of MS022268 vs. ExPASy Swiss-Prot
Match: Q9SZL5 (Pentatricopeptide repeat-containing protein At4g38150 OS=Arabidopsis thaliana OX=3702 GN=At4g38150 PE=2 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 6.1e-77
Identity = 148/229 (64.63%), Postives = 175/229 (76.42%), Query Frame = 0


Query: 131 DFSFLEKFKLNTDNQSSSKEKTEQSSAPRFSESVQEKQSQPQRPPE-ADEIFKKMKETGL 190
           D  FLE+FKL  +  S    K EQ               +P  PPE +DEIFKKMKE GL
Sbjct: 83  DDGFLEQFKLGVNQDSRETPKPEQ------------YPQEPLPPPEDSDEIFKKMKEGGL 142

Query: 191 IPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFR 250
           IPNAVAMLDGLCKDGL+QEAMKLFGL+R+KGTIPEVVIYTAVV+ FCKA K+++A RIFR
Sbjct: 143 IPNAVAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFR 202

Query: 251 KMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVTTFVGLVDELCKER 310
           KMQ NGI+PNAFS+GVL+QGLY CN L++A+ FC EMLESGHSPNV TFV LVD LC+ +
Sbjct: 203 KMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVK 262

Query: 311 GTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAIFGKKTKE 359
           G E+A+S I+TL QKGF +N KA++EF++KRAPF    WEAIF KK  E
Sbjct: 263 GVEQAQSAIDTLNQKGFAVNVKAVKEFMDKRAPFPSLAWEAIFKKKPTE 299

[Close]

BLAST of MS022268 vs. ExPASy Swiss-Prot
Match: Q9LPX2 (Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12775 PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 3.0e-23
Identity = 57/152 (37.50%), Postives = 85/152 (55.92%), Query Frame = 0


Query: 177 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVD 236
           A E+ +KM+E  +  +AV    ++DGLCKDG +  A  LF  +  KG   +++ Y  ++ 
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG 306

Query: 237 GFCKAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSP 296
           GFC A + D+  ++ R M K  ISPN  +F VLI    K  KL EA     EM++ G +P
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP 366

Query: 297 NVTTFVGLVDELCKERGTEEARSVIETLKQKG 326
           N  T+  L+D  CKE   EEA  +++ +  KG
Sbjct: 367 NTITYNSLIDGFCKENRLEEAIQMVDLMISKG 398

[Close]

BLAST of MS022268 vs. ExPASy Swiss-Prot
Match: Q0WVK7 (Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g05670 PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.9e-22
Identity = 59/179 (32.96%), Postives = 97/179 (54.19%), Query Frame = 0


Query: 176 EADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVV 235
           EA+E F +M   G++P+ V    ++DG CK G I+ A K F  +  +   P+V+ YTA++
Sbjct: 334 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 393

Query: 236 DGFCKAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHS 295
            GFC+   + EA ++F +M   G+ P++ +F  LI G  K   +++A      M+++G S
Sbjct: 394 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS 453

Query: 296 PNVTTFVGLVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAI 352
           PNV T+  L+D LCKE   + A  ++  + + G   N       +N     S NI EA+
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCK-SGNIEEAV 511

[Close]

BLAST of MS022268 vs. ExPASy Swiss-Prot
Match: Q9ASZ8 (Pentatricopeptide repeat-containing protein At1g12620 OS=Arabidopsis thaliana OX=3702 GN=At1g12620 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.3e-21
Identity = 56/165 (33.94%), Postives = 90/165 (54.55%), Query Frame = 0


Query: 177 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVD 236
           A E+ +KM+E  +  +AV    ++DGLCKDG +  A  LF  +  KG   +++IYT ++ 
Sbjct: 231 AMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIR 290

Query: 237 GFCKAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSP 296
           GFC A + D+  ++ R M K  I+P+  +F  LI    K  KL EA     EM++ G SP
Sbjct: 291 GFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISP 350

Query: 297 NVTTFVGLVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLN 339
           +  T+  L+D  CKE   ++A  +++ +  KG   N +     +N
Sbjct: 351 DTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILIN 395

[Close]

BLAST of MS022268 vs. ExPASy Swiss-Prot
Match: Q9FIT7 (Pentatricopeptide repeat-containing protein At5g61990, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g61990 PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 2.1e-21
Identity = 51/152 (33.55%), Postives = 91/152 (59.87%), Query Frame = 0


Query: 177 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVD 236
           AD+  K+M+E G++PN V    +++  CK G + EA   +  + ++G + +   YT +++
Sbjct: 541 ADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMN 600

Query: 237 GFCKAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSP 296
           G  K +K+D+A  IFR+M+  GI+P+ FS+GVLI G  K   +++A     EM+E G +P
Sbjct: 601 GLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTP 660

Query: 297 NVTTFVGLVDELCKERGTEEARSVIETLKQKG 326
           NV  +  L+   C+    E+A+ +++ +  KG
Sbjct: 661 NVIIYNMLLGGFCRSGEIEKAKELLDEMSVKG 692

[Close]

BLAST of MS022268 vs. ExPASy TrEMBL
Match: A0A6J1C2J3 (pentatricopeptide repeat-containing protein At4g38150 OS=Momordica charantia OX=3673 GN=LOC111007869 PE=4 SV=1)

HSP 1 Score: 695.3 bits (1793), Expect = 1.4e-196
Identity = 356/360 (98.89%), Postives = 359/360 (99.72%), Query Frame = 0


Query: 1   QLQLQSRLRISKIVSSSIWKCERQLPLLHDSLRTQDFSLLPTQSRCFSSNSMDDDWAISN 60
           QLQLQSRLR+SKIVSSSIWKCERQLPLLHDSLRTQDFSLLPTQSRCFSSNSMDDDWAISN
Sbjct: 5   QLQLQSRLRMSKIVSSSIWKCERQLPLLHDSLRTQDFSLLPTQSRCFSSNSMDDDWAISN 64

Query: 61  SEPRSSPPHRRSPPDSREPRRVPRFSDGVSASYPGDDRNRRINKRSEGSSFRFDNEGGIS 120
           SEPRS+PPHRRSPPDSREPRRVP+FSDGVSASYPGDDRNRRINKRSEGSSFRFDNEGGIS
Sbjct: 65  SEPRSNPPHRRSPPDSREPRRVPKFSDGVSASYPGDDRNRRINKRSEGSSFRFDNEGGIS 124

Query: 121 RQRSEFLSQKDFSFLEKFKLNTDNQSSSKEKTEQSSAPRFSESVQEKQSQPQRPPEADEI 180
           RQRSEFLSQKDFSFLEKFKLNTDNQSSSKEKTEQSSAPRFSESVQEKQSQPQRPPEADEI
Sbjct: 125 RQRSEFLSQKDFSFLEKFKLNTDNQSSSKEKTEQSSAPRFSESVQEKQSQPQRPPEADEI 184

Query: 181 FKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEK 240
           FKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEK
Sbjct: 185 FKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEK 244

Query: 241 LDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVTTFVG 300
           LDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVTT VG
Sbjct: 245 LDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVTTLVG 304

Query: 301 LVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAIFGKKTKEFF 360
           LVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAIFGKKTKEFF
Sbjct: 305 LVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAIFGKKTKEFF 364

[Close]

BLAST of MS022268 vs. ExPASy TrEMBL
Match: A0A6J1I1Q2 (pentatricopeptide repeat-containing protein At4g38150-like OS=Cucurbita maxima OX=3661 GN=LOC111468227 PE=4 SV=1)

HSP 1 Score: 565.5 bits (1456), Expect = 1.6e-157
Identity = 290/360 (80.56%), Postives = 318/360 (88.33%), Query Frame = 0


Query: 1   QLQLQSRLRISKIVSSSIWKCERQLPLLHDSLRTQDFSLLPTQSRCFSSNSMDDDWAISN 60
           Q+QLQSRLR+SKI+ S+I   ER  PLLHD LRT D SL P +SRCFSSNSMDDDW  S 
Sbjct: 5   QMQLQSRLRVSKILFSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFSR 64

Query: 61  SEPRSSPPHRRSPPDSREPRRVPRFSDGVSASYPGDDRNRRINKRSEGSSFRFDNEGGIS 120
           SEPRSSPP RRSPPD RE RRVP+F+  VSA YP D+RN+R N+  EGS  RF NEG +S
Sbjct: 65  SEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRFNRHWEGSESRFANEGPMS 124

Query: 121 RQRSEFLSQKDFSFLEKFKLNTDNQSSSKEKTEQSSAPRFSESVQEKQSQPQRPPEADEI 180
           R+RSE LSQKDFSFLEKFKLNTDN S+S EKTE SS+ +FSES+Q KQSQPQ PPEADEI
Sbjct: 125 RRRSESLSQKDFSFLEKFKLNTDNLSTSTEKTEPSSSAQFSESMQGKQSQPQCPPEADEI 184

Query: 181 FKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEK 240
           F+KMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVV+YTAVVDGFCKAE 
Sbjct: 185 FRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEN 244

Query: 241 LDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVTTFVG 300
           LDEAIRIFRKMQ NGISPNAFS+GVLIQGLYKC KLE+A+ FCIEMLESGHSPN+TTFVG
Sbjct: 245 LDEAIRIFRKMQNNGISPNAFSYGVLIQGLYKCKKLEDAVSFCIEMLESGHSPNLTTFVG 304

Query: 301 LVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAIFGKKTKEFF 360
           L+DELCKE+G +EA +VIETLKQKGFL+NEKALREFLNKRAPFSP+IWE IFGKKTKEFF
Sbjct: 305 LIDELCKEKGVDEAHTVIETLKQKGFLINEKALREFLNKRAPFSPHIWELIFGKKTKEFF 364

[Close]

BLAST of MS022268 vs. ExPASy TrEMBL
Match: A0A6J1GKZ0 (pentatricopeptide repeat-containing protein At4g38150-like OS=Cucurbita moschata OX=3662 GN=LOC111455321 PE=4 SV=1)

HSP 1 Score: 559.7 bits (1441), Expect = 9.0e-156
Identity = 286/360 (79.44%), Postives = 318/360 (88.33%), Query Frame = 0


Query: 1   QLQLQSRLRISKIVSSSIWKCERQLPLLHDSLRTQDFSLLPTQSRCFSSNSMDDDWAISN 60
           Q+QLQSRLR+SKI+SS+I   ER  PLLHD LRT D SL P +SRCFSSNSMDDDW  S 
Sbjct: 5   QMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFSR 64

Query: 61  SEPRSSPPHRRSPPDSREPRRVPRFSDGVSASYPGDDRNRRINKRSEGSSFRFDNEGGIS 120
           SEPRSSPP RRSPPD RE RRVP+F+  VSA YP D+RN+R N+ SEGSS RF N+G +S
Sbjct: 65  SEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRFNRHSEGSSSRFANDGPMS 124

Query: 121 RQRSEFLSQKDFSFLEKFKLNTDNQSSSKEKTEQSSAPRFSESVQEKQSQPQRPPEADEI 180
           R R+E LSQKDFSFLEKFKLNTDNQS+S EK E SS+ + SES+Q KQSQPQ PPEADEI
Sbjct: 125 RPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQISESMQGKQSQPQCPPEADEI 184

Query: 181 FKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEK 240
           F+KMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVV+YTAVVDGFCKAEK
Sbjct: 185 FRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEK 244

Query: 241 LDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVTTFVG 300
           LDEAIRIFRKMQ NGISPNAFS+G+LIQGLYK  +LE+A+ FCIEMLESGHSPN+TTFVG
Sbjct: 245 LDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCIEMLESGHSPNLTTFVG 304

Query: 301 LVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAIFGKKTKEFF 360
           L+DELCKE+G +EA +VIETLKQKGFL+NEK LR+FLNKRAPFSP+IWE IFGKKTKEFF
Sbjct: 305 LIDELCKEKGVDEAHTVIETLKQKGFLINEKDLRDFLNKRAPFSPHIWELIFGKKTKEFF 364

[Close]

BLAST of MS022268 vs. ExPASy TrEMBL
Match: A0A0A0K6C0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G029950 PE=4 SV=1)

HSP 1 Score: 508.1 bits (1307), Expect = 3.1e-140
Identity = 270/360 (75.00%), Postives = 302/360 (83.89%), Query Frame = 0


Query: 3   QLQSRLRISKIVSSSIWKCERQLPLLHDSLRTQDFSLLPTQSRCFSSNSMDDDWAISNSE 62
           QLQSRL++SKI+SS+I K E   PLLH+ LRT DFSL P QSR F+SNSMDDD A S+SE
Sbjct: 5   QLQSRLQVSKILSSTIRKWEIDFPLLHNPLRTPDFSLYPAQSRRFASNSMDDDHAFSDSE 64

Query: 63  PRSSPPHRRSPPDSREPRRVPRFSDGVSASYPGDDRNRRINKRSEGSSFRFDNEGGISRQ 122
           P ++PP RR PPD RE RRVPR   GV+ASY  D+RN+R N+ SEGSS RF NEG  S Q
Sbjct: 65  PINTPPQRRFPPDHREARRVPR--GGVTASY--DNRNQRFNRHSEGSSSRFTNEGSTSPQ 124

Query: 123 RSEFLSQKDFSFLEKFKLNTDNQSSSKEKTEQ--SSAPRFSESVQEKQSQPQRPPEADEI 182
           RSE LSQKDFSFLEKFKLNTDNQSS KEKTE+  SSAP     ++++QS+PQRPPEADEI
Sbjct: 125 RSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENSSSAPVSESMLEKQQSEPQRPPEADEI 184

Query: 183 FKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEK 242
           F KMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEK
Sbjct: 185 FGKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEK 244

Query: 243 LDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVTTFVG 302
            DEAIRIFRKMQ NGI PNAFSFGVLIQGLYKC KL++A+ FC EMLESGH PN+TTFVG
Sbjct: 245 FDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPNLTTFVG 304

Query: 303 LVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAIFGKKTKEFF 361
           L+D LC E+G +EA SV+ET KQKGFL++EKALRE LNKRAPFSP+IW+  FG +   FF
Sbjct: 305 LIDALCNEKGVDEAHSVVETFKQKGFLIDEKALREVLNKRAPFSPDIWKVFFGNRKPPFF 360

[Close]

BLAST of MS022268 vs. ExPASy TrEMBL
Match: A0A1S3CFW0 (pentatricopeptide repeat-containing protein At4g38150 OS=Cucumis melo OX=3656 GN=LOC103500481 PE=4 SV=1)

HSP 1 Score: 504.2 bits (1297), Expect = 4.5e-139
Identity = 272/360 (75.56%), Postives = 300/360 (83.33%), Query Frame = 0


Query: 3   QLQSRLRISKIVSSSIWKCERQLPLLHDSLRTQDFSLLPTQSRCFSSNSMDDDWAISNSE 62
           Q QSRL++SKI+SSSI K E   PLLH+ LRT DFSL P  SR FSSNSMDDD A S SE
Sbjct: 5   QFQSRLQVSKILSSSIRKWEIDFPLLHNPLRTPDFSLSPAPSRRFSSNSMDDDRAFSESE 64

Query: 63  PRSSPPHRRSPPDSREPRRVPRFSDGVSASYPGDDRNRRINKRSEGSSFRFDNEGGISRQ 122
           PR++PP RR PPD RE RRVPR   GV+ SY  D+RN+R N+ SEGSS RF NEG  SRQ
Sbjct: 65  PRNTPPQRRFPPDHREARRVPR--GGVTDSY--DNRNQRFNRHSEGSSSRFTNEGSTSRQ 124

Query: 123 RSEFLSQKDFSFLEKFKLNTDNQSSSKEKTEQ-SSAPRFSESVQEK-QSQPQRPPEADEI 182
           RSE LSQKDFSFLEKFKLNTDNQSS  EKTE+ SS+   SES+QEK QSQ QRPP ADEI
Sbjct: 125 RSESLSQKDFSFLEKFKLNTDNQSSGNEKTEENSSSAPVSESMQEKQQSQHQRPPAADEI 184

Query: 183 FKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEK 242
           F+KMKE+GLIPNAVAMLDGLCKDGLIQEAMKLF LIREKGTIPEVVIYTAVVDGFCKAEK
Sbjct: 185 FRKMKESGLIPNAVAMLDGLCKDGLIQEAMKLFALIREKGTIPEVVIYTAVVDGFCKAEK 244

Query: 243 LDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVTTFVG 302
            DEAIRIFRKMQ  GISPNAFSFGVLIQGLYKC KL++A+ FC EMLESGH PN+TTFVG
Sbjct: 245 FDEAIRIFRKMQNKGISPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPNLTTFVG 304

Query: 303 LVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAIFGKKTKEFF 361
           L+D LC E+G +EA +V+ET KQKGFL++EKALREFLNKRAPFSP+IW+  FG K   FF
Sbjct: 305 LIDVLCSEKGVDEAHNVVETFKQKGFLIDEKALREFLNKRAPFSPDIWKVFFGNKKAPFF 360

[Close]

BLAST of MS022268 vs. TAIR 10
Match: AT4G38150.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 289.3 bits (739), Expect = 4.3e-78
Identity = 148/229 (64.63%), Postives = 175/229 (76.42%), Query Frame = 0


Query: 131 DFSFLEKFKLNTDNQSSSKEKTEQSSAPRFSESVQEKQSQPQRPPE-ADEIFKKMKETGL 190
           D  FLE+FKL  +  S    K EQ               +P  PPE +DEIFKKMKE GL
Sbjct: 83  DDGFLEQFKLGVNQDSRETPKPEQ------------YPQEPLPPPEDSDEIFKKMKEGGL 142

Query: 191 IPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFR 250
           IPNAVAMLDGLCKDGL+QEAMKLFGL+R+KGTIPEVVIYTAVV+ FCKA K+++A RIFR
Sbjct: 143 IPNAVAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFR 202

Query: 251 KMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVTTFVGLVDELCKER 310
           KMQ NGI+PNAFS+GVL+QGLY CN L++A+ FC EMLESGHSPNV TFV LVD LC+ +
Sbjct: 203 KMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVK 262

Query: 311 GTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAIFGKKTKE 359
           G E+A+S I+TL QKGF +N KA++EF++KRAPF    WEAIF KK  E
Sbjct: 263 GVEQAQSAIDTLNQKGFAVNVKAVKEFMDKRAPFPSLAWEAIFKKKPTE 299

[Close]

BLAST of MS022268 vs. TAIR 10
Match: AT4G38150.2 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 289.3 bits (739), Expect = 4.3e-78
Identity = 148/229 (64.63%), Postives = 175/229 (76.42%), Query Frame = 0


Query: 131 DFSFLEKFKLNTDNQSSSKEKTEQSSAPRFSESVQEKQSQPQRPPE-ADEIFKKMKETGL 190
           D  FLE+FKL  +  S    K EQ               +P  PPE +DEIFKKMKE GL
Sbjct: 83  DDGFLEQFKLGVNQDSRETPKPEQ------------YPQEPLPPPEDSDEIFKKMKEGGL 142

Query: 191 IPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFR 250
           IPNAVAMLDGLCKDGL+QEAMKLFGL+R+KGTIPEVVIYTAVV+ FCKA K+++A RIFR
Sbjct: 143 IPNAVAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFR 202

Query: 251 KMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVTTFVGLVDELCKER 310
           KMQ NGI+PNAFS+GVL+QGLY CN L++A+ FC EMLESGHSPNV TFV LVD LC+ +
Sbjct: 203 KMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVK 262

Query: 311 GTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAIFGKKTKE 359
           G E+A+S I+TL QKGF +N KA++EF++KRAPF    WEAIF KK  E
Sbjct: 263 GVEQAQSAIDTLNQKGFAVNVKAVKEFMDKRAPFPSLAWEAIFKKKPTE 299

[Close]

BLAST of MS022268 vs. TAIR 10
Match: AT5G03560.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 128.3 bits (321), Expect = 1.3e-29
Identity = 100/313 (31.95%), Postives = 158/313 (50.48%), Query Frame = 0


Query: 59  SNSEPRSSPPHRRSPPDSREPRRVPRFSDGVSASY----PGDDRNRR---INKRSEGSSF 118
           S+S   SSP    +    +E +   RFS  + A +    P + R RR    +KR+  S F
Sbjct: 53  SSSSWWSSPDDLTASSKRKEKKTTERFSAVIDAVHDRKLPPELRGRRDFVRSKRNSNSLF 112

Query: 119 RFDNEGGISRQRSEFLSQKDFSFLEKFKLNTDNQSSSKE--------KTEQSSAPRFSES 178
            +   G  +RQ S     K  +    F L+ D+     E        K E    P    S
Sbjct: 113 PWFCGGVFARQFSS--ETKRVNTKVNFSLSDDDSDEETETQVTEDSKKQEPPPPPYDPFS 172

Query: 179 VQEKQSQPQRPPEADEIFKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIP 238
            +    +P+ P    EIF KM+  G    AV M D L KDG   EA++LF  I++K  +P
Sbjct: 173 KKPAIEEPEDPKNLQEIFHKMRTEGFTNEAVKMFDALSKDGRTHEALELFSQIKDKNRMP 232

Query: 239 EVVIYTAVVDGFCKAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKL-EEAIGF 298
           +VV +TA+V+ +  A +  E +++F +M  +G+SPNA+++ VLI+GL    K  ++A  +
Sbjct: 233 DVVAHTAIVEAYANAGQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKY 292

Query: 299 CIEMLESGHSPNVTTFVGLVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLN-KRA 355
            +EM+ +G SPN  T+  + +   +E   E AR +++ +K KGF+ +EKA+RE L  KR 
Sbjct: 293 LLEMMGNGMSPNAATYTAVFEAFVREGKEESARELLQEMKGKGFVPDEKAVREALEYKRG 352

[Close]

BLAST of MS022268 vs. TAIR 10
Match: AT1G12775.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 110.9 bits (276), Expect = 2.1e-24
Identity = 57/152 (37.50%), Postives = 85/152 (55.92%), Query Frame = 0


Query: 177 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVD 236
           A E+ +KM+E  +  +AV    ++DGLCKDG +  A  LF  +  KG   +++ Y  ++ 
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG 306

Query: 237 GFCKAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSP 296
           GFC A + D+  ++ R M K  ISPN  +F VLI    K  KL EA     EM++ G +P
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP 366

Query: 297 NVTTFVGLVDELCKERGTEEARSVIETLKQKG 326
           N  T+  L+D  CKE   EEA  +++ +  KG
Sbjct: 367 NTITYNSLIDGFCKENRLEEAIQMVDLMISKG 398

[Close]

BLAST of MS022268 vs. TAIR 10
Match: AT1G05670.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 108.2 bits (269), Expect = 1.4e-23
Identity = 59/179 (32.96%), Postives = 97/179 (54.19%), Query Frame = 0


Query: 176 EADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVV 235
           EA+E F +M   G++P+ V    ++DG CK G I+ A K F  +  +   P+V+ YTA++
Sbjct: 334 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 393

Query: 236 DGFCKAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHS 295
            GFC+   + EA ++F +M   G+ P++ +F  LI G  K   +++A      M+++G S
Sbjct: 394 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS 453

Query: 296 PNVTTFVGLVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAI 352
           PNV T+  L+D LCKE   + A  ++  + + G   N       +N     S NI EA+
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCK-SGNIEEAV 511

The following BLAST results are available for this feature:

BLAST of MS022268 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022136091.1	2.8e-196	98.89	pentatricopeptide repeat-containing protein At4g38150 [Momordica charantia] >XP_...	[more]
XP_022969144.1	3.4e-157	80.56	pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita maxima] >X...	[more]
XP_023554525.1	2.2e-156	80.00	pentatricopeptide repeat-containing protein At4g38150-like isoform X1 [Cucurbita...	[more]
KAG7011839.1	6.4e-156	79.72	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]
XP_022952706.1	1.9e-155	79.44	pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita moschata] ...	[more]

BLAST of MS022268 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZL5	6.1e-77	64.63	Pentatricopeptide repeat-containing protein At4g38150 OS=Arabidopsis thaliana OX...	[more]
Q9LPX2	3.0e-23	37.50	Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidop...	[more]
Q0WVK7	1.9e-22	32.96	Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidop...	[more]
Q9ASZ8	1.3e-21	33.94	Pentatricopeptide repeat-containing protein At1g12620 OS=Arabidopsis thaliana OX...	[more]
Q9FIT7	2.1e-21	33.55	Pentatricopeptide repeat-containing protein At5g61990, mitochondrial OS=Arabidop...	[more]

BLAST of MS022268 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C2J3	1.4e-196	98.89	pentatricopeptide repeat-containing protein At4g38150 OS=Momordica charantia OX=...	[more]
A0A6J1I1Q2	1.6e-157	80.56	pentatricopeptide repeat-containing protein At4g38150-like OS=Cucurbita maxima O...	[more]
A0A6J1GKZ0	9.0e-156	79.44	pentatricopeptide repeat-containing protein At4g38150-like OS=Cucurbita moschata...	[more]
A0A0A0K6C0	3.1e-140	75.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G029950 PE=4 SV=1	[more]
A0A1S3CFW0	4.5e-139	75.56	pentatricopeptide repeat-containing protein At4g38150 OS=Cucumis melo OX=3656 GN...	[more]

BLAST of MS022268 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38150.1	4.3e-78	64.63	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT4G38150.2	4.3e-78	64.63	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G03560.2	1.3e-29	31.95	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G12775.1	2.1e-24	37.50	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G05670.1	1.4e-23	32.96	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 262..295 e-value: 2.7E-4 score: 18.9 coord: 195..223 e-value: 7.7E-5 score: 20.6 coord: 226..260 e-value: 8.4E-11 score: 39.4
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 223..272 e-value: 6.0E-16 score: 58.4
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 195..220 e-value: 5.7E-5 score: 23.1
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 189..223 score: 8.582755
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 224..258 score: 13.296114
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 259..293 score: 10.314641
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 294..328 score: 8.714292
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 135..284 e-value: 6.1E-30 score: 106.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..84
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 97..111
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..116
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 143..176
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 143..171
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..66
None	No IPR available	PANTHER	PTHR45613:SF39	PPR CONTAINING PLANT-LIKE PROTEIN	coord: 49..358
None	No IPR available	PANTHER	PTHR45613	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 49..358

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS022268.1	MS022268.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding