MS022205 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCACGCGAAATCGTACTCGGAGGTGACGAGCGTGGAGCAGTCGTCGCCGGCGCGATCGCCGCGGCGGCCGCTCTACTACGTGCAGAGCCCGTCGAACCACGACGTGGAGAAAATGTCGTACGGGTCGAGCCCGATGGGGTCGCCGCCGCACCACTTCTACCACGCCTCCCCCATCCACCACTCCCGCGAGTCCTCCACCTCCCGCTTCTCCGCCTCCCTCAAGCCTAACCCCCGCAACCTCGCCGCCTGGAGGAAGCTCCACCGCCCCCTCGAATCCGACGCCGACGACGACGATGACGACGCCACCGCCGCCGCCGACGACCGCGATTCCGAATGGACCCGGAAGTTCCGGCTTTACTTGTTCTTGTTCGTTTTCTTCGTACTTCTCTTCACTGTGTTCTCCCTCATCCTCTGGGGCGCCAGCAGATCCTTCCACCCCCAAATCATCCTTCAGGTACACCCCATTGCAAATTTATTTTCATTGATTTTGGTTTTCATCTCTAATTTTGACTTTTTCATCTAGTTTTACACGCATTAATCGCTTATTATTATTATTATTATTATTATTATTTTTTGTGTGAAAAGCACATTAATGGCTTTTAGTGTTTGTGTTAACAAGAAATTGTTTTGTAGCTGGGACATTAAGTGGGAAGAAATGTATACATATTATTCTAAATATATATATATACATACACATTTTCTTTTGAATTCTAAGTTTCTAACATGTTGGGGGGATTGGAGCTCCAAACTAATTTAACTATAGAAAATATGAATAATATTTATGTATTGAATGGTAATGAATTTTTTTTAGTACAATAAATAGGAGGTATTAAGTTTGACTTTTGATCTCAAGAAAAGGAGCATGAATCTCCTTACTTGTGGTTCTAACTTAAGATAATTATTTGAAATCTAAAAATTATTTTTTTAATAATAACTTAAATGTACTTATAAGGGGTAAAAATATACGCAAAAAATTACAAGTATAATATTTAAAAATAAAAAATAAAAAATTTAAAAGAATACATTGCATAGTTTGAAGAGAAATTACAGCCACTTATCCCCAACCGGAATTCGAATCACCAAATCCCTATATTGTACTAGAAAAAGAAATTAAGAAAAAAGGGAAATATACTCAAATGGGATTTAAATAGGTTAGTTTATTTATTCTTTGGCAATTTCAGTACCTGAAAAGGTGGAAATTGTTATTATTAAATATATATGAAAAGCCGAAAAGTAGCATGTTTTGAGTTGGGAAAAATAAAAAAGGTGATAATATTTATATTATATTTATTGTGGAACAGAGTATGGTATTCGAGAGGTTTAACGTACAAGCGGGGAGTGATGCGGGGGGAGTGGCAACTGATCTGATGTCATTAAATTCGACGGTCAGGATCAAGTACAGAAATCCGGCCACGTTTTTCGGTGTCCACGTCAGCTCTTCCCCCATCCAGCTCAACTATTTCCAGCTCCAAATCGCCTCCGGCCAGGTATTTTTATTGTTTTAATTACATTTAGGCATGGCTGGCACGTCGTATCGTATCGTAGCCCGTAGGTTTGTGTGTTTTTGTTGCGGGTTTTGGCCCTTAGGTTTTGAATATTACAAAAGGGTGGTGGGGATCGGGGAATAGTGTAAATAGTGGTTTTTGTGGGGGTGAGGAATGGTAATTTGAGGAGACTTTTCAGACATTGGGAGCTGGGACGATTATAATTCGCAATCAGAAGTCTGCAAAGTCTGAGCAGTAGTAGTCTTTTTCATACTGGCAGTCTCTTTTGTAATTTTCCCGTTGGAGATAAAAAGGAGGATTTTTGGAAACTGTCCTATTTTATTCTTTTTTCACATTTTAAATTATCATAGGTTCAATCTTTTTTTTTAATCATATAGATTATTGTACCATGACCTTAGAATTTTTATGAGGTTTGTTTCAAGCCTCTCAAAACTTTTTTATTAATTGTTTAATAGGCGGATAATGTAGGTTTTTATTTATTTATTATTTTTTTTTGTAGTTTTATGTATATTGATGTGCTGACGTGGGTGTCTATTAGATCGATGACATAATAAAAATGATCTAAAAAGTCACGATTTTATAGTTTTTTTCCTTCTAATTTCTCCATCAATATTCAAAATTGAAAAATTTTGTATATAAAAAATTCAGATGTAAAATTTGGTCCATCCGTCCTTCATAGTTCATAGATTTAAACACCCACGTCAGCACATCAATATACATAAATTTTTTTTAGTACAAGTTATCGGGATGAGGATCGAACTCTCAACTTCATAAGTTGGATATATATACTTTAATTCGTTAAACTATGCGTGGATGACCAAAAATAGTTAATTTTTAAGGTTAGGAACTAAAGTAAATATAAATTTAGGAATGAAAATGAGATTTAAACTAGAGCTTTATCTCAAAATTTTCTTCTCTCCCTTTTTCCTCTCTAAGCTATTGATCCTATCCTTTTCAATTTCTATTTAAATTAGGTATAATATGTTCGTATCCTCATTCCAACTGACTAATAATTATATAGATATATAGATGTTAATTACCAATCAAACATTTTCCTTTAAAATTTTGCAATGGAGAAAATGAGAGGGAGTAAAGGAAATGAAACAAAGAATCAAATAATGCTTTAGCAATGGTACATATAGGTGGAGATCAAACATTTAACCTTAAAGGAAAGAAGTAGAGATGTTTTAACAACTGAACTTATATATATATATTTAAATTAGATGATGGAGTTCTACGAAAAAAGGCAGAGCTCTCGGAGGGTGGCGACAGCGGTGGCGGGGCACCAGGTGCCGCTGTACGGTGGGATCGCGGTGATCGGAAACTGGAGGGAGCAGCGACAGGAGGGGGTGGAGGTGCCGCTGAACCTGACGGTGGCGGTGAGGTCAAGAGCTTACATTCTGGGGAAGCTGGTGAAGTCCACATTCCACACCACAATTACTTGCTCACTCACTCTCAGAACTAAGAATCTTGGCAAATCCCACTCTCTCAACAATTCTTGCATTTAC ATGCACGCGAAATCGTACTCGGAGGTGACGAGCGTGGAGCAGTCGTCGCCGGCGCGATCGCCGCGGCGGCCGCTCTACTACGTGCAGAGCCCGTCGAACCACGACGTGGAGAAAATGTCGTACGGGTCGAGCCCGATGGGGTCGCCGCCGCACCACTTCTACCACGCCTCCCCCATCCACCACTCCCGCGAGTCCTCCACCTCCCGCTTCTCCGCCTCCCTCAAGCCTAACCCCCGCAACCTCGCCGCCTGGAGGAAGCTCCACCGCCCCCTCGAATCCGACGCCGACGACGACGATGACGACGCCACCGCCGCCGCCGACGACCGCGATTCCGAATGGACCCGGAAGTTCCGGCTTTACTTGTTCTTGTTCGTTTTCTTCGTACTTCTCTTCACTGTGTTCTCCCTCATCCTCTGGGGCGCCAGCAGATCCTTCCACCCCCAAATCATCCTTCAGAGTATGGTATTCGAGAGGTTTAACGTACAAGCGGGGAGTGATGCGGGGGGAGTGGCAACTGATCTGATGTCATTAAATTCGACGGTCAGGATCAAGTACAGAAATCCGGCCACGTTTTTCGGTGTCCACGTCAGCTCTTCCCCCATCCAGCTCAACTATTTCCAGCTCCAAATCGCCTCCGGCCAGATGATGGAGTTCTACGAAAAAAGGCAGAGCTCTCGGAGGGTGGCGACAGCGGTGGCGGGGCACCAGGTGCCGCTGTACGGTGGGATCGCGGTGATCGGAAACTGGAGGGAGCAGCGACAGGAGGGGGTGGAGGTGCCGCTGAACCTGACGGTGGCGGTGAGGTCAAGAGCTTACATTCTGGGGAAGCTGGTGAAGTCCACATTCCACACCACAATTACTTGCTCACTCACTCTCAGAACTAAGAATCTTGGCAAATCCCACTCTCTCAACAATTCTTGCATTTAC ATGCACGCGAAATCGTACTCGGAGGTGACGAGCGTGGAGCAGTCGTCGCCGGCGCGATCGCCGCGGCGGCCGCTCTACTACGTGCAGAGCCCGTCGAACCACGACGTGGAGAAAATGTCGTACGGGTCGAGCCCGATGGGGTCGCCGCCGCACCACTTCTACCACGCCTCCCCCATCCACCACTCCCGCGAGTCCTCCACCTCCCGCTTCTCCGCCTCCCTCAAGCCTAACCCCCGCAACCTCGCCGCCTGGAGGAAGCTCCACCGCCCCCTCGAATCCGACGCCGACGACGACGATGACGACGCCACCGCCGCCGCCGACGACCGCGATTCCGAATGGACCCGGAAGTTCCGGCTTTACTTGTTCTTGTTCGTTTTCTTCGTACTTCTCTTCACTGTGTTCTCCCTCATCCTCTGGGGCGCCAGCAGATCCTTCCACCCCCAAATCATCCTTCAGAGTATGGTATTCGAGAGGTTTAACGTACAAGCGGGGAGTGATGCGGGGGGAGTGGCAACTGATCTGATGTCATTAAATTCGACGGTCAGGATCAAGTACAGAAATCCGGCCACGTTTTTCGGTGTCCACGTCAGCTCTTCCCCCATCCAGCTCAACTATTTCCAGCTCCAAATCGCCTCCGGCCAGATGATGGAGTTCTACGAAAAAAGGCAGAGCTCTCGGAGGGTGGCGACAGCGGTGGCGGGGCACCAGGTGCCGCTGTACGGTGGGATCGCGGTGATCGGAAACTGGAGGGAGCAGCGACAGGAGGGGGTGGAGGTGCCGCTGAACCTGACGGTGGCGGTGAGGTCAAGAGCTTACATTCTGGGGAAGCTGGTGAAGTCCACATTCCACACCACAATTACTTGCTCACTCACTCTCAGAACTAAGAATCTTGGCAAATCCCACTCTCTCAACAATTCTTGCATTTAC MHAKSYSEVTSVEQSSPARSPRRPLYYVQSPSNHDVEKMSYGSSPMGSPPHHFYHASPIHHSRESSTSRFSASLKPNPRNLAAWRKLHRPLESDADDDDDDATAAADDRDSEWTRKFRLYLFLFVFFVLLFTVFSLILWGASRSFHPQIILQSMVFERFNVQAGSDAGGVATDLMSLNSTVRIKYRNPATFFGVHVSSSPIQLNYFQLQIASGQMMEFYEKRQSSRRVATAVAGHQVPLYGGIAVIGNWREQRQEGVEVPLNLTVAVRSRAYILGKLVKSTFHTTITCSLTLRTKNLGKSHSLNNSCIY Homology
BLAST of MS022205 vs. NCBI nr
Match: XP_022135688.1 (uncharacterized protein LOC111007587 isoform X1 [Momordica charantia] >XP_022135689.1 uncharacterized protein LOC111007587 isoform X2 [Momordica charantia]) HSP 1 Score: 599.4 bits (1544), Expect = 1.8e-167 Identity = 306/309 (99.03%), Postives = 306/309 (99.03%), Query Frame = 0
BLAST of MS022205 vs. NCBI nr
Match: XP_038888376.1 (uncharacterized protein LOC120078225 [Benincasa hispida]) HSP 1 Score: 513.1 bits (1320), Expect = 1.7e-141 Identity = 261/312 (83.65%), Postives = 283/312 (90.71%), Query Frame = 0
BLAST of MS022205 vs. NCBI nr
Match: XP_008447896.1 (PREDICTED: uncharacterized protein LOC103490245 [Cucumis melo]) HSP 1 Score: 508.4 bits (1308), Expect = 4.2e-140 Identity = 258/314 (82.17%), Postives = 282/314 (89.81%), Query Frame = 0
BLAST of MS022205 vs. NCBI nr
Match: XP_004144875.1 (uncharacterized protein LOC101215215 [Cucumis sativus] >KGN43297.1 hypothetical protein Csa_020295 [Cucumis sativus]) HSP 1 Score: 507.7 bits (1306), Expect = 7.2e-140 Identity = 256/314 (81.53%), Postives = 282/314 (89.81%), Query Frame = 0
BLAST of MS022205 vs. NCBI nr
Match: XP_022928427.1 (uncharacterized protein LOC111435243 [Cucurbita moschata]) HSP 1 Score: 501.5 bits (1290), Expect = 5.1e-138 Identity = 256/312 (82.05%), Postives = 278/312 (89.10%), Query Frame = 0
BLAST of MS022205 vs. ExPASy TrEMBL
Match: A0A6J1C5K4 (uncharacterized protein LOC111007587 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007587 PE=4 SV=1) HSP 1 Score: 599.4 bits (1544), Expect = 8.8e-168 Identity = 306/309 (99.03%), Postives = 306/309 (99.03%), Query Frame = 0
BLAST of MS022205 vs. ExPASy TrEMBL
Match: A0A1S3BJ42 (uncharacterized protein LOC103490245 OS=Cucumis melo OX=3656 GN=LOC103490245 PE=4 SV=1) HSP 1 Score: 508.4 bits (1308), Expect = 2.0e-140 Identity = 258/314 (82.17%), Postives = 282/314 (89.81%), Query Frame = 0
BLAST of MS022205 vs. ExPASy TrEMBL
Match: A0A0A0K4T2 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G018790 PE=4 SV=1) HSP 1 Score: 507.7 bits (1306), Expect = 3.5e-140 Identity = 256/314 (81.53%), Postives = 282/314 (89.81%), Query Frame = 0
BLAST of MS022205 vs. ExPASy TrEMBL
Match: A0A6J1EJW4 (uncharacterized protein LOC111435243 OS=Cucurbita moschata OX=3662 GN=LOC111435243 PE=4 SV=1) HSP 1 Score: 501.5 bits (1290), Expect = 2.5e-138 Identity = 256/312 (82.05%), Postives = 278/312 (89.10%), Query Frame = 0
BLAST of MS022205 vs. ExPASy TrEMBL
Match: A0A6J1JK28 (uncharacterized protein LOC111486495 OS=Cucurbita maxima OX=3661 GN=LOC111486495 PE=4 SV=1) HSP 1 Score: 498.4 bits (1282), Expect = 2.1e-137 Identity = 254/312 (81.41%), Postives = 278/312 (89.10%), Query Frame = 0
BLAST of MS022205 vs. TAIR 10
Match: AT2G41990.1 (CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT4G35170.1); Has 172 Blast hits to 168 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 172; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 278.1 bits (710), Expect = 8.6e-75 Identity = 163/313 (52.08%), Postives = 210/313 (67.09%), Query Frame = 0
BLAST of MS022205 vs. TAIR 10
Match: AT1G45688.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G42860.1); Has 258 Blast hits to 242 proteins in 39 species: Archae - 0; Bacteria - 11; Metazoa - 10; Fungi - 14; Plants - 198; Viruses - 17; Other Eukaryotes - 8 (source: NCBI BLink). ) HSP 1 Score: 228.4 bits (581), Expect = 7.8e-60 Identity = 148/339 (43.66%), Postives = 205/339 (60.47%), Query Frame = 0
BLAST of MS022205 vs. TAIR 10
Match: AT4G35170.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family ) HSP 1 Score: 224.9 bits (572), Expect = 8.6e-59 Identity = 137/296 (46.28%), Postives = 188/296 (63.51%), Query Frame = 0
BLAST of MS022205 vs. TAIR 10
Match: AT5G42860.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G45688.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 204.1 bits (518), Expect = 1.6e-52 Identity = 136/335 (40.60%), Postives = 189/335 (56.42%), Query Frame = 0
BLAST of MS022205 vs. TAIR 10
Match: AT1G45688.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G42860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 176.4 bits (446), Expect = 3.5e-44 Identity = 113/228 (49.56%), Postives = 150/228 (65.79%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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