MS022187 (gene) Bitter gourd (TR) v1

Overview


Name	MS022187
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	DNL-type domain-containing protein
Location	scaffold47: 1514555 .. 1516411 (-)
RNA-Seq Expression	MS022187
Synteny	MS022187

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTCTCTAATCAACGCTTCTCCTGCTGCGATCGTCTCCTCCTCTTCTTCTTTTTCAATGTCTTTGCCCAATAGGATTCCTTCTCTCAGATCTTTTCAAGTTCCGCACGCCTCGAAAGGTATTCGTAGTTTGTGTCTGATTTCTGCTCCGGTTTTTGTTCTTTTGTTTGTTTACATCTTTCTTTGAGGAAATTTGAGGAAATTCGCAATCGGTGTGTGTTGTCGAAGCGCTTGCTGAAAGATCCTGCTTATCGTTTGATTTTGTTTCGTCTTGGAAGGAATTTTGTTGTATTATTGATTTTATGTTTCTTGTTTTGAGTTGCCTGCTTAAGTTTTGTAATCTATCTTCAGGTAACGAGAACGAATCTGATTCTCAGACTGATTCGAATAACATTAGGAACCTTCCAATCCTAAGTAAACGCCACCTCTCTCTTTCCCCTCTTTCGAAGGTATCCTCTCTGTGTTGCTATTGTTTCCTTATTTTAATGCTCTCTTCGTTATGTTTCTGCTAATTTAAGATAAAGTTCATGGATTATCATTCATCCAACTACTTGTTTTGATCTCGTTGTTCCCTACTTGTTTTCTTTCTTTTTTTTCCTTCTAAAATTCTTCTTAAAAAAAAAAAAAAAGAAGAAGAAGAAGGAGAAAGAACTACACTAGAGAGAAATAGAATTGTTATTTATTTTCTGTAATTTCTGTAAGAAGAAAAATGATGATTCTGGAATAAGAGAGTTCGTGAACCTTTATAGGTGCAAATTGCAATTGGTTGGATTGAATCCTAGAACTAAATTAGATATATGGACTTTTTTGTTTTGCCATTCGATCTTATTGAAGCTTCCTGTAAACTGTAAAGTTTTCCTGTTTATTTTCCTTTCCGCTTTAGGATGTTGCCATGGGAGTGGTGCTTAGCGCAGCCACGGGAAGAGGATGGACGACAGGGTCTGGCATGGAAGGTCCCTCAGCTCCGGCTGGATTGGAGGGCAAATCAAGCACTGAGAATATCTCCACTTTCCCATGGTCACTTTTCACGAAATCTCCTCGTCGAAGAATGCTTGTGGCTTTTACTTGTAACATTTGTGGGCAACGAACGACACGAGCCATCAACCCCCATGCTTATACTGATGGCACTGTGTTTGTGCAGGTAAGATTTCACACACTTAGTGCAATTTATTTTGACCATTTGAGTTTATCTACAAATTAGAAGCATTAGAAGCATATAGTTTTCACTTTTTTGGGTGAGGTTTCTTACCGAAATGATTTTATACAATTTCCGTTTCGTAAAGAATTGGTGTCAAAGAAATCATACAACAGAACACATTAATCTTTGAGTTCTGATAGTAGCCTAATGAGGTGCAGAAAATACNTTTTAAGTTTCTTTTTATAAATAAATAAATAAATATATATATATATATATATATATATAAGTGGTTAGGCGCTGAGGCGCACACCTCAAGCACCTTTTTTAAGGGTGCCTTGCTTCTAGGGGGCTTTTCTGGGAAGTGCGCCTAGGTGCCAGGCCCCCTTTTCAGAACGTTGTTCTGCATGTTGGCTCATATTCTCTCAGTTATTTTAGTTCTTGGTTCAAATGTGTTGCCGAAAGCTGTAGGTGGACAATTAGACACAAATTTGTAGAGAAATAAATTACAAATTGACGGCAACCTAATCGGGTTCGTCCTTGCTTTCGCTCTTGTAGTGTTGTGGATGCAGTGCATACCACAAGCTCGTGGACAACTTGAACCTGTTTCATGAGATGAAATGCTACATCAACCCGAGTTTTAACTATGGGAGTAATGGATGGGGCGATGTAAACTTCAAATATCTGGACGATGGAAGCGATGATATATACCCGATACAA

mRNA sequence

ATGGAGTCTCTAATCAACGCTTCTCCTGCTGCGATCGTCTCCTCCTCTTCTTCTTTTTCAATGTCTTTGCCCAATAGGATTCCTTCTCTCAGATCTTTTCAAGTTCCGCACGCCTCGAAAGGTAACGAGAACGAATCTGATTCTCAGACTGATTCGAATAACATTAGGAACCTTCCAATCCTAAGTAAACGCCACCTCTCTCTTTCCCCTCTTTCGAAGGATGTTGCCATGGGAGTGGTGCTTAGCGCAGCCACGGGAAGAGGATGGACGACAGGGTCTGGCATGGAAGGTCCCTCAGCTCCGGCTGGATTGGAGGGCAAATCAAGCACTGAGAATATCTCCACTTTCCCATGGTCACTTTTCACGAAATCTCCTCGTCGAAGAATGCTTGTGGCTTTTACTTGTAACATTTGTGGGCAACGAACGACACGAGCCATCAACCCCCATGCTTATACTGATGGCACTGTGTTTGTGCAGTGTTGTGGATGCAGTGCATACCACAAGCTCGTGGACAACTTGAACCTGTTTCATGAGATGAAATGCTACATCAACCCGAGTTTTAACTATGGGAGTAATGGATGGGGCGATGTAAACTTCAAATATCTGGACGATGGAAGCGATGATATATACCCGATACAA

Coding sequence (CDS)

ATGGAGTCTCTAATCAACGCTTCTCCTGCTGCGATCGTCTCCTCCTCTTCTTCTTTTTCAATGTCTTTGCCCAATAGGATTCCTTCTCTCAGATCTTTTCAAGTTCCGCACGCCTCGAAAGGTAACGAGAACGAATCTGATTCTCAGACTGATTCGAATAACATTAGGAACCTTCCAATCCTAAGTAAACGCCACCTCTCTCTTTCCCCTCTTTCGAAGGATGTTGCCATGGGAGTGGTGCTTAGCGCAGCCACGGGAAGAGGATGGACGACAGGGTCTGGCATGGAAGGTCCCTCAGCTCCGGCTGGATTGGAGGGCAAATCAAGCACTGAGAATATCTCCACTTTCCCATGGTCACTTTTCACGAAATCTCCTCGTCGAAGAATGCTTGTGGCTTTTACTTGTAACATTTGTGGGCAACGAACGACACGAGCCATCAACCCCCATGCTTATACTGATGGCACTGTGTTTGTGCAGTGTTGTGGATGCAGTGCATACCACAAGCTCGTGGACAACTTGAACCTGTTTCATGAGATGAAATGCTACATCAACCCGAGTTTTAACTATGGGAGTAATGGATGGGGCGATGTAAACTTCAAATATCTGGACGATGGAAGCGATGATATATACCCGATACAA

Protein sequence

MESLINASPAAIVSSSSSFSMSLPNRIPSLRSFQVPHASKGNENESDSQTDSNNIRNLPILSKRHLSLSPLSKDVAMGVVLSAATGRGWTTGSGMEGPSAPAGLEGKSSTENISTFPWSLFTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHEMKCYINPSFNYGSNGWGDVNFKYLDDGSDDIYPIQ

Homology

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BLAST of MS022187 vs. NCBI nr
Match: XP_022135584.1 (uncharacterized protein LOC111007505 [Momordica charantia])

HSP 1 Score: 429.9 bits (1104), Expect = 1.3e-116
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0


Query: 1   MESLINASPAAIVSSSSSFSMSLPNRIPSLRSFQVPHASKGNENESDSQTDSNNIRNLPI 60
           MESLINASPAAIVSSSSSFSMSLPNRIPSLRSFQVPHASKGNENESDSQTDSNNIRNLPI
Sbjct: 1   MESLINASPAAIVSSSSSFSMSLPNRIPSLRSFQVPHASKGNENESDSQTDSNNIRNLPI 60

Query: 61  LSKRHLSLSPLSKDVAMGVVLSAATGRGWTTGSGMEGPSAPAGLEGKSSTENISTFPWSL 120
           LSKRHLSLSPLSKDVAMGVVLSAATGRGWTTGSGMEGPSAPAGLEGKSSTENISTFPWSL
Sbjct: 61  LSKRHLSLSPLSKDVAMGVVLSAATGRGWTTGSGMEGPSAPAGLEGKSSTENISTFPWSL 120

Query: 121 FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHEMK 180
           FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHEMK
Sbjct: 121 FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHEMK 180

Query: 181 CYINPSFNYGSNGWGDVNFKYLDDGSDDIYPIQ 214
           CYINPSFNYGSNGWGDVNFKYLDDGSDDIYPIQ
Sbjct: 181 CYINPSFNYGSNGWGDVNFKYLDDGSDDIYPIQ 213

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BLAST of MS022187 vs. NCBI nr
Match: XP_008447918.1 (PREDICTED: uncharacterized protein LOC103490262 [Cucumis melo] >KAA0025115.1 Mitochondrial protein import protein ZIM17 [Cucumis melo var. makuwa] >TYK19358.1 Mitochondrial protein import protein ZIM17 [Cucumis melo var. makuwa])

HSP 1 Score: 389.8 bits (1000), Expect = 1.5e-104
Identity = 195/216 (90.28%), Postives = 203/216 (93.98%), Query Frame = 0


Query: 1   MESLINASPAAIVSSSSSFSMSLPNRIPSLRSFQVPHASKGNENESDSQTDSNNIRNLPI 60
           MESLINAS AAIVSSSSSF +S P R   LRSFQVPHASKGN+NESDSQ+DSNNIRNLPI
Sbjct: 1   MESLINASSAAIVSSSSSFPISSPIRNLPLRSFQVPHASKGNDNESDSQSDSNNIRNLPI 60

Query: 61  LSKRHLSLSPLSKDVAMGVVLSAATGRGWTTGSGMEGPSAPAGLEGKSSTENISTFPWSL 120
           LSKRHLSLSPLSKDVAMG+VLSAATGRGWTTGSGMEGP APAGLE KS TEN+STFPWSL
Sbjct: 61  LSKRHLSLSPLSKDVAMGMVLSAATGRGWTTGSGMEGPPAPAGLEAKSGTENVSTFPWSL 120

Query: 121 FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHEMK 180
           FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGC+AYHKLVDNLNLFHEMK
Sbjct: 121 FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHEMK 180

Query: 181 CYINPSFNYGSNGWGDVNFKYLD---DGSDDIYPIQ 214
           CYINPSFNYGSNGWGDVNFKYLD   DG+DDI+PIQ
Sbjct: 181 CYINPSFNYGSNGWGDVNFKYLDVEEDGNDDIFPIQ 216

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BLAST of MS022187 vs. NCBI nr
Match: XP_022989271.1 (uncharacterized protein LOC111486391 isoform X2 [Cucurbita maxima])

HSP 1 Score: 387.9 bits (995), Expect = 5.7e-104
Identity = 193/216 (89.35%), Postives = 202/216 (93.52%), Query Frame = 0


Query: 1   MESLINASPAAIVSSSSSFSMSLPNRIPSLRSFQVPHASKGNENESDSQTDSNNIRNLPI 60
           MESLINAS AAIVSSSS+F +S PNR+  LRSFQVPHASKGNENESDSQ+DS NIRNLPI
Sbjct: 1   MESLINASSAAIVSSSSTFPISSPNRMLPLRSFQVPHASKGNENESDSQSDSKNIRNLPI 60

Query: 61  LSKRHLSLSPLSKDVAMGVVLSAATGRGWTTGSGMEGPSAPAGLEGKSSTENISTFPWSL 120
           LSKRHLSLSPLSKDVAMGVVLSAATGRGWTTGSGMEGPS+P GLE KS TEN+STFPWSL
Sbjct: 61  LSKRHLSLSPLSKDVAMGVVLSAATGRGWTTGSGMEGPSSPVGLEAKSGTENVSTFPWSL 120

Query: 121 FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHEMK 180
           FTKSPRRRMLVAFTC ICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHEMK
Sbjct: 121 FTKSPRRRMLVAFTCKICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHEMK 180

Query: 181 CYINPSFNYGSNGWGDVNFKYLD---DGSDDIYPIQ 214
           CY+NPSFNYGSNGWGDVNFKYLD   DGS+DI+P Q
Sbjct: 181 CYVNPSFNYGSNGWGDVNFKYLDMEEDGSNDIFPNQ 216

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BLAST of MS022187 vs. NCBI nr
Match: XP_038886988.1 (uncharacterized protein LOC120077156 [Benincasa hispida])

HSP 1 Score: 384.8 bits (987), Expect = 4.8e-103
Identity = 192/216 (88.89%), Postives = 200/216 (92.59%), Query Frame = 0


Query: 1   MESLINASPAAIVSSSSSFSMSLPNRIPSLRSFQVPHASKGNENESDSQTDSNNIRNLPI 60
           MESLINAS AAIVSSSSSF +  PNR+  LRSFQVPHASKGNENESDS++DS NIRNLPI
Sbjct: 1   MESLINASSAAIVSSSSSFPIPSPNRMLPLRSFQVPHASKGNENESDSESDSKNIRNLPI 60

Query: 61  LSKRHLSLSPLSKDVAMGVVLSAATGRGWTTGSGMEGPSAPAGLEGKSSTENISTFPWSL 120
           LSKRHLSLSPL KDVAMGVVLSAA GRGWTTGSGMEGP APAGLEGKS TEN+STFPWSL
Sbjct: 61  LSKRHLSLSPLPKDVAMGVVLSAARGRGWTTGSGMEGPPAPAGLEGKSGTENVSTFPWSL 120

Query: 121 FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHEMK 180
           FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGC+AYHKLVDNLNLFHEMK
Sbjct: 121 FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHEMK 180

Query: 181 CYINPSFNYGSNGWGDVNFKYLD---DGSDDIYPIQ 214
           CY+NPSFNYGSNGW DVNFKYLD    GSDDI+PIQ
Sbjct: 181 CYVNPSFNYGSNGWEDVNFKYLDIEEGGSDDIFPIQ 216

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BLAST of MS022187 vs. NCBI nr
Match: XP_004144863.1 (uncharacterized protein LOC101212325 [Cucumis sativus] >KGN43276.1 hypothetical protein Csa_020164 [Cucumis sativus])

HSP 1 Score: 382.9 bits (982), Expect = 1.8e-102
Identity = 190/216 (87.96%), Postives = 200/216 (92.59%), Query Frame = 0


Query: 1   MESLINASPAAIVSSSSSFSMSLPNRIPSLRSFQVPHASKGNENESDSQTDSNNIRNLPI 60
           MESLINAS A IVSSSSSF +S P R   LRSFQVPHASKGN+NESDSQ+DS N RNLPI
Sbjct: 1   MESLINASSAGIVSSSSSFPISSPIRNLPLRSFQVPHASKGNDNESDSQSDSKNTRNLPI 60

Query: 61  LSKRHLSLSPLSKDVAMGVVLSAATGRGWTTGSGMEGPSAPAGLEGKSSTENISTFPWSL 120
           LSKRHLSLSPLSKDVAMG+VLSAATGRGWTTGSGMEGP APAG+E KS TEN+STFPWSL
Sbjct: 61  LSKRHLSLSPLSKDVAMGMVLSAATGRGWTTGSGMEGPPAPAGMEAKSGTENVSTFPWSL 120

Query: 121 FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHEMK 180
           FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGC+AYHKLVDNLNLFHEMK
Sbjct: 121 FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHEMK 180

Query: 181 CYINPSFNYGSNGWGDVNFKYLD---DGSDDIYPIQ 214
           CYINPSFNYGSNGWGDVNFKYLD   DG+DD++PIQ
Sbjct: 181 CYINPSFNYGSNGWGDVNFKYLDVEEDGNDDVFPIQ 216

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BLAST of MS022187 vs. ExPASy Swiss-Prot
Match: B3LPE4 (Mitochondrial protein import protein ZIM17 OS=Saccharomyces cerevisiae (strain RM11-1a) OX=285006 GN=ZIM17 PE=3 SV=2)

HSP 1 Score: 55.8 bits (133), Expect = 6.7e-07
Identity = 26/91 (28.57%), Postives = 47/91 (51.65%), Query Frame = 0


Query: 123 KSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHE---- 182
           K  + +M++AFTC  C  R++  ++  AY  GTV + C  C   H + D+L +FH+    
Sbjct: 63  KVDKPKMMIAFTCKKCNTRSSHTMSKQAYEKGTVLISCPHCKVRHLIADHLKIFHDHHVT 122

Query: 183 MKCYINPSFNYGSNGWGDVNFKYLDDGSDDI 210
           ++  +  +    S   GD+ F+ + D   D+
Sbjct: 123 VEQLMKANGEQVSQDVGDLEFEDIPDSLKDV 153

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BLAST of MS022187 vs. ExPASy Swiss-Prot
Match: B5VQB0 (Mitochondrial protein import protein ZIM17 OS=Saccharomyces cerevisiae (strain AWRI1631) OX=545124 GN=ZIM17 PE=3 SV=2)

HSP 1 Score: 55.8 bits (133), Expect = 6.7e-07
Identity = 26/91 (28.57%), Postives = 47/91 (51.65%), Query Frame = 0


Query: 123 KSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHE---- 182
           K  + +M++AFTC  C  R++  ++  AY  GTV + C  C   H + D+L +FH+    
Sbjct: 63  KVDKPKMMIAFTCKKCNTRSSHTMSKQAYEKGTVLISCPHCKVRHLIADHLKIFHDHHVT 122

Query: 183 MKCYINPSFNYGSNGWGDVNFKYLDDGSDDI 210
           ++  +  +    S   GD+ F+ + D   D+
Sbjct: 123 VEQLMKANGEQVSQDVGDLEFEDIPDSLKDV 153

[Close]

BLAST of MS022187 vs. ExPASy Swiss-Prot
Match: A6ZSH0 (Mitochondrial protein import protein ZIM17 OS=Saccharomyces cerevisiae (strain YJM789) OX=307796 GN=ZIM17 PE=3 SV=2)

HSP 1 Score: 55.8 bits (133), Expect = 6.7e-07
Identity = 26/91 (28.57%), Postives = 47/91 (51.65%), Query Frame = 0


Query: 123 KSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHE---- 182
           K  + +M++AFTC  C  R++  ++  AY  GTV + C  C   H + D+L +FH+    
Sbjct: 63  KVDKPKMMIAFTCKKCNTRSSHTMSKQAYEKGTVLISCPHCKVRHLIADHLKIFHDHHVT 122

Query: 183 MKCYINPSFNYGSNGWGDVNFKYLDDGSDDI 210
           ++  +  +    S   GD+ F+ + D   D+
Sbjct: 123 VEQLMKANGEQVSQDVGDLEFEDIPDSLKDV 153

[Close]

BLAST of MS022187 vs. ExPASy Swiss-Prot
Match: P42844 (Mitochondrial protein import protein ZIM17 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=ZIM17 PE=1 SV=2)

HSP 1 Score: 55.8 bits (133), Expect = 6.7e-07
Identity = 26/91 (28.57%), Postives = 47/91 (51.65%), Query Frame = 0


Query: 123 KSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHE---- 182
           K  + +M++AFTC  C  R++  ++  AY  GTV + C  C   H + D+L +FH+    
Sbjct: 63  KVDKPKMMIAFTCKKCNTRSSHTMSKQAYEKGTVLISCPHCKVRHLIADHLKIFHDHHVT 122

Query: 183 MKCYINPSFNYGSNGWGDVNFKYLDDGSDDI 210
           ++  +  +    S   GD+ F+ + D   D+
Sbjct: 123 VEQLMKANGEQVSQDVGDLEFEDIPDSLKDV 153

[Close]

BLAST of MS022187 vs. ExPASy Swiss-Prot
Match: Q9D113 (DNL-type zinc finger protein OS=Mus musculus OX=10090 GN=Dnlz PE=1 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 9.7e-06
Identity = 29/96 (30.21%), Postives = 45/96 (46.88%), Query Frame = 0


Query: 87  RGWTTG--SGMEGPSAPAGLEGKSSTENISTFPWSLFTKSPRRRMLVAFTCNICGQRTTR 146
           RGW  G  SG    S+  G    ++   +    + L            +TC +CG R+++
Sbjct: 40  RGWAWGWASGWRSSSSAPGSGRAAALGRVEADHYQL-----------VYTCKVCGTRSSK 99

Query: 147 AINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHEMK 181
            I+  AY  G V V C GC  +H + DNL+ F ++K
Sbjct: 100 RISKLAYHQGVVIVTCPGCQNHHIIADNLSWFSDLK 124

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BLAST of MS022187 vs. ExPASy TrEMBL
Match: A0A6J1C1U8 (uncharacterized protein LOC111007505 OS=Momordica charantia OX=3673 GN=LOC111007505 PE=4 SV=1)

HSP 1 Score: 429.9 bits (1104), Expect = 6.3e-117
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0


Query: 1   MESLINASPAAIVSSSSSFSMSLPNRIPSLRSFQVPHASKGNENESDSQTDSNNIRNLPI 60
           MESLINASPAAIVSSSSSFSMSLPNRIPSLRSFQVPHASKGNENESDSQTDSNNIRNLPI
Sbjct: 1   MESLINASPAAIVSSSSSFSMSLPNRIPSLRSFQVPHASKGNENESDSQTDSNNIRNLPI 60

Query: 61  LSKRHLSLSPLSKDVAMGVVLSAATGRGWTTGSGMEGPSAPAGLEGKSSTENISTFPWSL 120
           LSKRHLSLSPLSKDVAMGVVLSAATGRGWTTGSGMEGPSAPAGLEGKSSTENISTFPWSL
Sbjct: 61  LSKRHLSLSPLSKDVAMGVVLSAATGRGWTTGSGMEGPSAPAGLEGKSSTENISTFPWSL 120

Query: 121 FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHEMK 180
           FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHEMK
Sbjct: 121 FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHEMK 180

Query: 181 CYINPSFNYGSNGWGDVNFKYLDDGSDDIYPIQ 214
           CYINPSFNYGSNGWGDVNFKYLDDGSDDIYPIQ
Sbjct: 181 CYINPSFNYGSNGWGDVNFKYLDDGSDDIYPIQ 213

[Close]

BLAST of MS022187 vs. ExPASy TrEMBL
Match: A0A5D3D712 (Mitochondrial protein import protein ZIM17 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3037G00120 PE=4 SV=1)

HSP 1 Score: 389.8 bits (1000), Expect = 7.3e-105
Identity = 195/216 (90.28%), Postives = 203/216 (93.98%), Query Frame = 0


Query: 1   MESLINASPAAIVSSSSSFSMSLPNRIPSLRSFQVPHASKGNENESDSQTDSNNIRNLPI 60
           MESLINAS AAIVSSSSSF +S P R   LRSFQVPHASKGN+NESDSQ+DSNNIRNLPI
Sbjct: 1   MESLINASSAAIVSSSSSFPISSPIRNLPLRSFQVPHASKGNDNESDSQSDSNNIRNLPI 60

Query: 61  LSKRHLSLSPLSKDVAMGVVLSAATGRGWTTGSGMEGPSAPAGLEGKSSTENISTFPWSL 120
           LSKRHLSLSPLSKDVAMG+VLSAATGRGWTTGSGMEGP APAGLE KS TEN+STFPWSL
Sbjct: 61  LSKRHLSLSPLSKDVAMGMVLSAATGRGWTTGSGMEGPPAPAGLEAKSGTENVSTFPWSL 120

Query: 121 FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHEMK 180
           FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGC+AYHKLVDNLNLFHEMK
Sbjct: 121 FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHEMK 180

Query: 181 CYINPSFNYGSNGWGDVNFKYLD---DGSDDIYPIQ 214
           CYINPSFNYGSNGWGDVNFKYLD   DG+DDI+PIQ
Sbjct: 181 CYINPSFNYGSNGWGDVNFKYLDVEEDGNDDIFPIQ 216

[Close]

BLAST of MS022187 vs. ExPASy TrEMBL
Match: A0A1S3BII6 (uncharacterized protein LOC103490262 OS=Cucumis melo OX=3656 GN=LOC103490262 PE=4 SV=1)

HSP 1 Score: 389.8 bits (1000), Expect = 7.3e-105
Identity = 195/216 (90.28%), Postives = 203/216 (93.98%), Query Frame = 0


Query: 1   MESLINASPAAIVSSSSSFSMSLPNRIPSLRSFQVPHASKGNENESDSQTDSNNIRNLPI 60
           MESLINAS AAIVSSSSSF +S P R   LRSFQVPHASKGN+NESDSQ+DSNNIRNLPI
Sbjct: 1   MESLINASSAAIVSSSSSFPISSPIRNLPLRSFQVPHASKGNDNESDSQSDSNNIRNLPI 60

Query: 61  LSKRHLSLSPLSKDVAMGVVLSAATGRGWTTGSGMEGPSAPAGLEGKSSTENISTFPWSL 120
           LSKRHLSLSPLSKDVAMG+VLSAATGRGWTTGSGMEGP APAGLE KS TEN+STFPWSL
Sbjct: 61  LSKRHLSLSPLSKDVAMGMVLSAATGRGWTTGSGMEGPPAPAGLEAKSGTENVSTFPWSL 120

Query: 121 FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHEMK 180
           FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGC+AYHKLVDNLNLFHEMK
Sbjct: 121 FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHEMK 180

Query: 181 CYINPSFNYGSNGWGDVNFKYLD---DGSDDIYPIQ 214
           CYINPSFNYGSNGWGDVNFKYLD   DG+DDI+PIQ
Sbjct: 181 CYINPSFNYGSNGWGDVNFKYLDVEEDGNDDIFPIQ 216

[Close]

BLAST of MS022187 vs. ExPASy TrEMBL
Match: A0A6J1JJL2 (uncharacterized protein LOC111486391 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111486391 PE=4 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 2.8e-104
Identity = 193/216 (89.35%), Postives = 202/216 (93.52%), Query Frame = 0


Query: 1   MESLINASPAAIVSSSSSFSMSLPNRIPSLRSFQVPHASKGNENESDSQTDSNNIRNLPI 60
           MESLINAS AAIVSSSS+F +S PNR+  LRSFQVPHASKGNENESDSQ+DS NIRNLPI
Sbjct: 1   MESLINASSAAIVSSSSTFPISSPNRMLPLRSFQVPHASKGNENESDSQSDSKNIRNLPI 60

Query: 61  LSKRHLSLSPLSKDVAMGVVLSAATGRGWTTGSGMEGPSAPAGLEGKSSTENISTFPWSL 120
           LSKRHLSLSPLSKDVAMGVVLSAATGRGWTTGSGMEGPS+P GLE KS TEN+STFPWSL
Sbjct: 61  LSKRHLSLSPLSKDVAMGVVLSAATGRGWTTGSGMEGPSSPVGLEAKSGTENVSTFPWSL 120

Query: 121 FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHEMK 180
           FTKSPRRRMLVAFTC ICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHEMK
Sbjct: 121 FTKSPRRRMLVAFTCKICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHEMK 180

Query: 181 CYINPSFNYGSNGWGDVNFKYLD---DGSDDIYPIQ 214
           CY+NPSFNYGSNGWGDVNFKYLD   DGS+DI+P Q
Sbjct: 181 CYVNPSFNYGSNGWGDVNFKYLDMEEDGSNDIFPNQ 216

[Close]

BLAST of MS022187 vs. ExPASy TrEMBL
Match: A0A6J1EQU5 (uncharacterized protein LOC111435053 OS=Cucurbita moschata OX=3662 GN=LOC111435053 PE=4 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 8.9e-103
Identity = 192/217 (88.48%), Postives = 201/217 (92.63%), Query Frame = 0


Query: 1   MESLINASPAAIVSSSSSFSMSLPNRIPSLRSFQVPHASKGNENESDSQTDSNNIRNLPI 60
           MESLINAS AAIVSSSSSF +S PNR+  LRSFQVPHASKGNENESD Q+DS NIRNLPI
Sbjct: 1   MESLINASSAAIVSSSSSFPISSPNRMLPLRSFQVPHASKGNENESDCQSDSKNIRNLPI 60

Query: 61  LSKRHLSLSPLSKDVAMGVVLSAATGRGWTTGSGMEGPSAPAGLEGKSSTENISTFPWSL 120
           LSK HLSLSPLSKD+AMGVVLSAATGRGWTTGSGMEGPS+PAGLE KS T N+STFPWSL
Sbjct: 61  LSKHHLSLSPLSKDIAMGVVLSAATGRGWTTGSGMEGPSSPAGLEAKSGTGNVSTFPWSL 120

Query: 121 FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHEMK 180
           FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHE+K
Sbjct: 121 FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHELK 180

Query: 181 CYINPSFNYGSNGWGDVNFKYLD---DGS-DDIYPIQ 214
           CY+NPSFNYGSNGWGDVNFKYLD   DGS DDI+P Q
Sbjct: 181 CYVNPSFNYGSNGWGDVNFKYLDMEEDGSNDDIFPTQ 217

[Close]

BLAST of MS022187 vs. TAIR 10
Match: AT5G27280.1 (Zim17-type zinc finger protein )

HSP 1 Score: 198.4 bits (503), Expect = 6.0e-51
Identity = 116/214 (54.21%), Postives = 142/214 (66.36%), Query Frame = 0


Query: 1   MESLINASPAAIVSSSSS-FSMSLPNR----IPSLRSFQVPHASKGNENESDSQTDSNNI 60
           ME+   +S A I+SSSSS  S+  P +     P  R  ++  ++K  + + D Q   +N 
Sbjct: 1   MEATSLSSAATIISSSSSPLSIFSPKKRTDSSPPPRIVRL--SNKKEDKDYDPQHSESNS 60

Query: 61  RNLPILSKRHLSLSPLSKDVAMGVVLSAATGRGWTTGSGMEGPSAPAGLEGKSSTENIST 120
            +L            LS D AMG+VLSAA+ +GWTTGSGMEGPS PA    K+ T+ +ST
Sbjct: 61  SSL-------FRNRTLSNDEAMGLVLSAASVKGWTTGSGMEGPSLPA----KTDTDTVST 120

Query: 121 FPWSLFTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNL 180
           FPWSLFTKSPRRRM VAFTCN+CGQRTTRAINPHAYTDGTVFVQCCGC+ +HKLVDNLNL
Sbjct: 121 FPWSLFTKSPRRRMRVAFTCNVCGQRTTRAINPHAYTDGTVFVQCCGCNVFHKLVDNLNL 180

Query: 181 FHEMKCYI-NPSFNYGSNGWGDVNFKYLDDGSDD 209
           FHE+K Y+ + SF+Y    W        DD  DD
Sbjct: 181 FHEVKYYVSSSSFDYTDAKWDVSGLNLFDDEDDD 201

[Close]

BLAST of MS022187 vs. TAIR 10
Match: AT1G68730.1 (Zim17-type zinc finger protein )

HSP 1 Score: 79.7 bits (195), Expect = 3.1e-15
Identity = 37/60 (61.67%), Postives = 41/60 (68.33%), Query Frame = 0


Query: 119 SLFTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHE 178
           S+  K PRR + V FTCN CG+RT R IN HAY  G VFVQC GC  +HKLVDNL L  E
Sbjct: 96  SIDIKLPRRSLQVEFTCNSCGERTKRLINRHAYEKGLVFVQCAGCLKHHKLVDNLGLIVE 155

The following BLAST results are available for this feature:

BLAST of MS022187 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022135584.1	1.3e-116	100.00	uncharacterized protein LOC111007505 [Momordica charantia]	[more]
XP_008447918.1	1.5e-104	90.28	PREDICTED: uncharacterized protein LOC103490262 [Cucumis melo] >KAA0025115.1 Mit...	[more]
XP_022989271.1	5.7e-104	89.35	uncharacterized protein LOC111486391 isoform X2 [Cucurbita maxima]	[more]
XP_038886988.1	4.8e-103	88.89	uncharacterized protein LOC120077156 [Benincasa hispida]	[more]
XP_004144863.1	1.8e-102	87.96	uncharacterized protein LOC101212325 [Cucumis sativus] >KGN43276.1 hypothetical ...	[more]

BLAST of MS022187 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B3LPE4	6.7e-07	28.57	Mitochondrial protein import protein ZIM17 OS=Saccharomyces cerevisiae (strain R...	[more]
B5VQB0	6.7e-07	28.57	Mitochondrial protein import protein ZIM17 OS=Saccharomyces cerevisiae (strain A...	[more]
A6ZSH0	6.7e-07	28.57	Mitochondrial protein import protein ZIM17 OS=Saccharomyces cerevisiae (strain Y...	[more]
P42844	6.7e-07	28.57	Mitochondrial protein import protein ZIM17 OS=Saccharomyces cerevisiae (strain A...	[more]
Q9D113	9.7e-06	30.21	DNL-type zinc finger protein OS=Mus musculus OX=10090 GN=Dnlz PE=1 SV=1	[more]

BLAST of MS022187 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C1U8	6.3e-117	100.00	uncharacterized protein LOC111007505 OS=Momordica charantia OX=3673 GN=LOC111007...	[more]
A0A5D3D712	7.3e-105	90.28	Mitochondrial protein import protein ZIM17 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3BII6	7.3e-105	90.28	uncharacterized protein LOC103490262 OS=Cucumis melo OX=3656 GN=LOC103490262 PE=...	[more]
A0A6J1JJL2	2.8e-104	89.35	uncharacterized protein LOC111486391 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1EQU5	8.9e-103	88.48	uncharacterized protein LOC111435053 OS=Cucurbita moschata OX=3662 GN=LOC1114350...	[more]

BLAST of MS022187 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G27280.1	6.0e-51	54.21	Zim17-type zinc finger protein	[more]
AT1G68730.1	3.1e-15	61.67	Zim17-type zinc finger protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007853	Zinc finger, DNL-type	PFAM	PF05180	zf-DNL	coord: 131..183 e-value: 2.9E-16 score: 59.2
IPR007853	Zinc finger, DNL-type	PROSITE	PS51501	ZF_DNL	coord: 124..213 score: 14.392239
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..56
None	No IPR available	PANTHER	PTHR20922:SF15	A_TM021B04.14 PROTEIN	coord: 1..212
IPR024158	Mitochondrial import protein TIM15	PANTHER	PTHR20922	UNCHARACTERIZED	coord: 1..212

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS022187.1	MS022187.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008270	zinc ion binding