MS022115 (gene) Bitter gourd (TR) v1

Overview


Name	MS022115
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	ubiquitin recognition factor in ER-associated degradation protein 1-like
Location	scaffold47: 972923 .. 975838 (-)
RNA-Seq Expression	MS022115
Synteny	MS022115

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGTATTTTGATGGATATGGTTATCGTGGAACCACATTTGAACACAGATATCAATGCTTCTCTGCGTCATTTATTGATAAGGTTTGATTACCTTCAACATCTGTCACCAGAAATGTACTCAAATGCTGATTAGTATTTGATTTGTTTCCTGAATTTTGCATTTTCATTGCTAAGCATCCATAATAAAGGCGGTTTCCATGATAGAAAATTAAATGTAGGCAGCAGTTGCAATATGCTCTTGTCTTTGTTTGAAGTTGGAGCATGGAACAAGCATTGCTCTTGAATTAATTTTTTTTATGAGCTTATAACTGCATATAATATTAAGCAATCACCGCTCATGTCTCAAATTTGTTGGCTAAAAGGCGTTTTAAGCATCCATATTTGCATGCATATAACTTGAGAGCGCTTCCTAAAGTGAATATTTTCTTCTAATTCCAATTAATCTTTTTCATACTGCAGCCACACATTGAAACTGGAGATAGAAGTAAGATGTTCTTTCTTTACCATTTTTATGGTTTAGGTTCCATGTCCCATCTTAACGTATTTTTTTAACTCCATCTTCTTAATTTCTCATGTTGTTTATTGTTATTTTCATTGTGCAGTTATAATGCCTCCATCAGCCCTTGATCGCCTCGGTTTGTTGGGATCTCTTTAAAAATCCTTTTTCTTCTCCTGTTTTTTCCATCGTTGTTCGTTTCATTGTAGGTTACTGATTTTAAACATAACCCCCTGCAGCATCTTTACAAATTGATTATCCAATGTTGTTTGAACTTCGAAATGATGCTGTTGAGCGAGTCTCTCATTGCGGGGTTTTGGAGTTTGTTGCAGAGGAAGGCATGATTTACATGCCTTATTGGGTAGGTCCATATTTCTCTTGCATGATATGTATCCCCGGTGTTATTAGCTCTTACTTCCTATCCAATGATTCTCCCACTTCCTTTCTAATTGTTTCCCCTTCAGATGATGGAGAACATGCTTTTACCAGAAGGAGGCCTTGTGCATGTGAAGAATGTCACTCTTCCAAAGGGAACCTATGTCAAATTACAACCTCACACGAAGGACTTCTTGGATATCTCCAATCCAAAAGCAATGTGAGTTAATTGTTCATGTTTTGGTTGGTGATACATGTGTCTAATGTTCTCCAATTGTTGGTATTTCCAGCTTGGGTCATAGGAAGGAGTTTTAAAGCTGAAATCTTCTACCACTTATTTAATTTGAAAGCGCTCTCTTTAACCTCTGTTAATTTAGCAATTACCAACCACGTTTAAAGTCTCAAGCCCAAGGAGTACACAAAATGCTTGAACATCATCAAAGCACCCATATCTAAGTTCCATGTTTCAATGAACGCATGGTATCCCCTTAGAATATTGAGTATAACAGAAAAACTTGTTGACGTCAATTGTTCTAGGGTTGGACTATTAGTCCTTTCAACTAGTTAAGATATGTGAAGCTAGTCCAAATCTATACATATGAAAGAATGCATTACTACAGCCATCTTGAAAGCGCTTTTCGATCTTGCAAGAATACCCCTAGCTTAATGAATGTAATGCTGAAAATTTTTATGGTGTTTGGTTGAATATCAAATTGTTTTCTCAATTTGTCTGTGCTTGGTTTTCTTAATAAAAAGGAAGAACTAAAAAGTTGCCTGTTCTTGAAAACATTGTCTAATCCTTCTGGAAGAAGTCTAAGAAGCGCGCTCAAGTGTTAATATTGCTCTCGAAAACATTTCCAAACTCATCCTTAGTCTTGACGGATGAGGAGGGAGGTCTTTCTTGTCTGTAATGATGTGCCCTTGTCATACATCATATATGATTTCTCCATCTGTAATGGTTGGAACGATGAAGTTTGTTTACATTACACTTTTGTATTTTATTTTATTTTTTTTGTCATTACAGCTTGGAGACAACACTTCGGAATTTCTCCTGCCTCTCCACTGGAGACAGTATTATGGTGGCATATAACAACAAGAAATATTACATTGACATAGTTGAAACGAAGCCTTCCAATGCAATAAGTATTATTGAGACGGATTGTGAGGTGGATTTCGCACCTCCCTTGGATTACAAGGAACCGGAGAAGCCTGTTGCACCAATCAAGGGGAAGGAGCAAGGTATAATCTTCTACACTTTTTCTCCTACACTGCAATTTGCGGCTGCTGCAGTGCTGCCGTTGTTTTTCATTTTTAACAGTTTGGTGTTTCCTCTCGTTTTATCTATGCCTATGAAATTGACCTTTTATATCAGTTTCTTATTGTAGTTTATTGATTTTAAACACAACCCCCCTGCATTAAATCGTGACGTGCACATCGTGTAGACTGAACCAGTTAAATTTATTTTGACATACCAGTATAATGTTGGTCAAATCAACTCGGGAGAGATGCATTTAGGAAGGAGGCAGTCTGTCTAATTCTAAATGAATTCTCTTGCAGTTGCAGAGGCTCCAGCAGCGGAAGCCGAGCCCAAATTTAGTGCTTTCACAGGAACAGGAAGACGTTTAGATGGAAAATCTGCAAGTCACCAGCCTCAGTCAATTTCATCCTCTAGGTCATCAGATGAGAAGCAATCTGCTCAATCTGCTGGGTCTAGCTCACAGAACGGAACTCGTCGGTCTCTGGGAAAGTTAGTGTTTGGACAAAATGCTCCTCGAAACCCTAAAGAAGCTCCAAAGGTACCCTACCCACTTTGCACATTCCATCATCCTATTTTAAATCAATGCTTTTCCCAACCAGGAAACCAGCCTGGTAAAAGGTTTTTTTGCTCCTATTGCCTTCCATCAATTGTATTGAAAAAGAAAAGAAAACTAAACAGAGTTTTTGTCATTTCGTAGGATGCCACGAAAGAGAGTAAACAAGAGCAGCCTGAAAAGGACGAGCCGAAATTTGAGCCCTTCTCTGGGAAAAGGTACTCGCTGAGAGGT

mRNA sequence

CAGTATTTTGATGGATATGGTTATCGTGGAACCACATTTGAACACAGATATCAATGCTTCTCTGCGTCATTTATTGATAAGCCACACATTGAAACTGGAGATAGAATTATAATGCCTCCATCAGCCCTTGATCGCCTCGCATCTTTACAAATTGATTATCCAATGTTGTTTGAACTTCGAAATGATGCTGTTGAGCGAGTCTCTCATTGCGGGGTTTTGGAGTTTGTTGCAGAGGAAGGCATGATTTACATGCCTTATTGGATGATGGAGAACATGCTTTTACCAGAAGGAGGCCTTGTGCATGTGAAGAATGTCACTCTTCCAAAGGGAACCTATGTCAAATTACAACCTCACACGAAGGACTTCTTGGATATCTCCAATCCAAAAGCAATCTTGGAGACAACACTTCGGAATTTCTCCTGCCTCTCCACTGGAGACAGTATTATGGTGGCATATAACAACAAGAAATATTACATTGACATAGTTGAAACGAAGCCTTCCAATGCAATAAGTATTATTGAGACGGATTGTGAGGTGGATTTCGCACCTCCCTTGGATTACAAGGAACCGGAGAAGCCTGTTGCACCAATCAAGGGGAAGGAGCAAGTTGCAGAGGCTCCAGCAGCGGAAGCCGAGCCCAAATTTAGTGCTTTCACAGGAACAGGAAGACGTTTAGATGGAAAATCTGCAAGTCACCAGCCTCAGTCAATTTCATCCTCTAGGTCATCAGATGAGAAGCAATCTGCTCAATCTGCTGGGTCTAGCTCACAGAACGGAACTCGTCGGTCTCTGGGAAAGTTAGTGTTTGGACAAAATGCTCCTCGAAACCCTAAAGAAGCTCCAAAGGATGCCACGAAAGAGAGTAAACAAGAGCAGCCTGAAAAGGACGAGCCGAAATTTGAGCCCTTCTCTGGGAAAAGGTACTCGCTGAGAGGT

Coding sequence (CDS)

CAGTATTTTGATGGATATGGTTATCGTGGAACCACATTTGAACACAGATATCAATGCTTCTCTGCGTCATTTATTGATAAGCCACACATTGAAACTGGAGATAGAATTATAATGCCTCCATCAGCCCTTGATCGCCTCGCATCTTTACAAATTGATTATCCAATGTTGTTTGAACTTCGAAATGATGCTGTTGAGCGAGTCTCTCATTGCGGGGTTTTGGAGTTTGTTGCAGAGGAAGGCATGATTTACATGCCTTATTGGATGATGGAGAACATGCTTTTACCAGAAGGAGGCCTTGTGCATGTGAAGAATGTCACTCTTCCAAAGGGAACCTATGTCAAATTACAACCTCACACGAAGGACTTCTTGGATATCTCCAATCCAAAAGCAATCTTGGAGACAACACTTCGGAATTTCTCCTGCCTCTCCACTGGAGACAGTATTATGGTGGCATATAACAACAAGAAATATTACATTGACATAGTTGAAACGAAGCCTTCCAATGCAATAAGTATTATTGAGACGGATTGTGAGGTGGATTTCGCACCTCCCTTGGATTACAAGGAACCGGAGAAGCCTGTTGCACCAATCAAGGGGAAGGAGCAAGTTGCAGAGGCTCCAGCAGCGGAAGCCGAGCCCAAATTTAGTGCTTTCACAGGAACAGGAAGACGTTTAGATGGAAAATCTGCAAGTCACCAGCCTCAGTCAATTTCATCCTCTAGGTCATCAGATGAGAAGCAATCTGCTCAATCTGCTGGGTCTAGCTCACAGAACGGAACTCGTCGGTCTCTGGGAAAGTTAGTGTTTGGACAAAATGCTCCTCGAAACCCTAAAGAAGCTCCAAAGGATGCCACGAAAGAGAGTAAACAAGAGCAGCCTGAAAAGGACGAGCCGAAATTTGAGCCCTTCTCTGGGAAAAGGTACTCGCTGAGAGGT

Protein sequence

QYFDGYGYRGTTFEHRYQCFSASFIDKPHIETGDRIIMPPSALDRLASLQIDYPMLFELRNDAVERVSHCGVLEFVAEEGMIYMPYWMMENMLLPEGGLVHVKNVTLPKGTYVKLQPHTKDFLDISNPKAILETTLRNFSCLSTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKEPEKPVAPIKGKEQVAEAPAAEAEPKFSAFTGTGRRLDGKSASHQPQSISSSRSSDEKQSAQSAGSSSQNGTRRSLGKLVFGQNAPRNPKEAPKDATKESKQEQPEKDEPKFEPFSGKRYSLRG

Homology

[Close]

BLAST of MS022115 vs. NCBI nr
Match: XP_022135862.1 (ubiquitin recognition factor in ER-associated degradation protein 1-like [Momordica charantia])

HSP 1 Score: 605.9 bits (1561), Expect = 2.0e-169
Identity = 307/311 (98.71%), Postives = 308/311 (99.04%), Query Frame = 0


Query: 2   YFDGYGYRGTTFEHRYQCFSASFIDKPHIETGDRIIMPPSALDRLASLQIDYPMLFELRN 61
           YFDGYGYRGTTFEHRYQCFSASFIDKPHIETGDRIIMPPSALDRLASLQIDYPMLFELRN
Sbjct: 2   YFDGYGYRGTTFEHRYQCFSASFIDKPHIETGDRIIMPPSALDRLASLQIDYPMLFELRN 61

Query: 62  DAVERVSHCGVLEFVAEEGMIYMPYWMMENMLLPEGGLVHVKNVTLPKGTYVKLQPHTKD 121
           DAVERVSHCGVLEFVAEEGMIYMPYWMMENMLLPEGGLVHVKNVTLPKGTYVKLQPHTKD
Sbjct: 62  DAVERVSHCGVLEFVAEEGMIYMPYWMMENMLLPEGGLVHVKNVTLPKGTYVKLQPHTKD 121

Query: 122 FLDISNPKAILETTLRNFSCLSTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDF 181
           FLDISNPKAILETTLRNFSCLSTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDF
Sbjct: 122 FLDISNPKAILETTLRNFSCLSTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDF 181

Query: 182 APPLDYKEPEKPVAPIKGKEQVAEAPAAEAEPKFSAFTGTGRRLDGKSASHQPQSISSSR 241
           APPLDYKEPEKPV PIKGKEQVAEAPAAEAEPKF+AFTGTGRRLDGKS SHQPQSISSSR
Sbjct: 182 APPLDYKEPEKPVVPIKGKEQVAEAPAAEAEPKFNAFTGTGRRLDGKSVSHQPQSISSSR 241

Query: 242 SSDEKQSAQSAGSSSQNGTRRSLGKLVFGQNAPRNPKEAPKDATKESKQEQPEKDEPKFE 301
           SSDEKQSAQSAGSSSQNGTRRS GKLVFGQNAPRNPKEAPKDATKESKQEQPEKDEPKFE
Sbjct: 242 SSDEKQSAQSAGSSSQNGTRRSQGKLVFGQNAPRNPKEAPKDATKESKQEQPEKDEPKFE 301

Query: 302 PFSGKRYSLRG 313
           PFSGKRYSLRG
Sbjct: 302 PFSGKRYSLRG 312

[Close]

BLAST of MS022115 vs. NCBI nr
Match: XP_038887743.1 (ubiquitin recognition factor in ER-associated degradation protein 1-like isoform X1 [Benincasa hispida])

HSP 1 Score: 552.0 bits (1421), Expect = 3.3e-153
Identity = 286/320 (89.38%), Postives = 296/320 (92.50%), Query Frame = 0


Query: 2   YFDGYGYRGTTFEHRYQCFSASFIDKPHIETGDRIIMPPSALDRLASLQIDYPMLFELRN 61
           YFDGYGYRGT+FE RYQCFSASFIDKPHIETGDRIIMPPSALDRLASLQIDYPMLFELRN
Sbjct: 3   YFDGYGYRGTSFEQRYQCFSASFIDKPHIETGDRIIMPPSALDRLASLQIDYPMLFELRN 62

Query: 62  DAVERVSHCGVLEFVAEEGMIYMPYWMMENMLLPEGGLVHVKNVTLPKGTYVKLQPHTKD 121
           DAVERVSHCGVLEFVAEEGMIYMPYWMMENMLL EG LV VKNVTLPKGTYVKLQPHTKD
Sbjct: 63  DAVERVSHCGVLEFVAEEGMIYMPYWMMENMLLQEGDLVQVKNVTLPKGTYVKLQPHTKD 122

Query: 122 FLDISNPKAILETTLRNFSCLSTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDF 181
           FLDISNPKAILETTLRNFSCL+TGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDF
Sbjct: 123 FLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDF 182

Query: 182 APPLDYKEPEKPVAPIKGKEQVAEAPAAEAEPKFSAFTGTGRRLDGKSASHQPQSISSSR 241
           APPLDYKEPEKPVA IKGKEQVAEAP AEAEPKFSAF GTGRRLDGKS++HQPQ ISSSR
Sbjct: 183 APPLDYKEPEKPVASIKGKEQVAEAPYAEAEPKFSAFMGTGRRLDGKSSNHQPQPISSSR 242

Query: 242 SSDEKQSA---------QSAGSSSQNGTRRSLGKLVFGQNAPRNPKEAPKDATKESKQEQ 301
           SSDEKQS          QSAGSSS NGTR S GKLVFGQNA RNPKE  K+A+KESKQ+Q
Sbjct: 243 SSDEKQSGGNSRYGHSQQSAGSSSVNGTRHSEGKLVFGQNANRNPKETLKEASKESKQKQ 302

Query: 302 PEKDEPKFEPFSGKRYSLRG 313
           PEK++PKF+PFSGKRYSLRG
Sbjct: 303 PEKEDPKFQPFSGKRYSLRG 322

[Close]

BLAST of MS022115 vs. NCBI nr
Match: XP_038887744.1 (ubiquitin recognition factor in ER-associated degradation protein 1-like isoform X2 [Benincasa hispida])

HSP 1 Score: 543.9 bits (1400), Expect = 9.1e-151
Identity = 284/320 (88.75%), Postives = 294/320 (91.88%), Query Frame = 0


Query: 2   YFDGYGYRGTTFEHRYQCFSASFIDKPHIETGDRIIMPPSALDRLASLQIDYPMLFELRN 61
           YFDGYGYRGT+FE RYQCFSASFIDKPHIETGDRIIMPPSALDRLASLQIDYPMLFELRN
Sbjct: 3   YFDGYGYRGTSFEQRYQCFSASFIDKPHIETGDRIIMPPSALDRLASLQIDYPMLFELRN 62

Query: 62  DAVERVSHCGVLEFVAEEGMIYMPYWMMENMLLPEGGLVHVKNVTLPKGTYVKLQPHTKD 121
           DAVERVSHCGVLEFVAEEGMIYMPYWMMENMLL EG LV VKNVTLPKGTYVKLQPHTKD
Sbjct: 63  DAVERVSHCGVLEFVAEEGMIYMPYWMMENMLLQEGDLVQVKNVTLPKGTYVKLQPHTKD 122

Query: 122 FLDISNPKAILETTLRNFSCLSTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDF 181
           FLDISNPKAILETTLRNFSCL+TGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDF
Sbjct: 123 FLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDF 182

Query: 182 APPLDYKEPEKPVAPIKGKEQVAEAPAAEAEPKFSAFTGTGRRLDGKSASHQPQSISSSR 241
           APPLDYKEPEKPVA IKGKEQ  EAP AEAEPKFSAF GTGRRLDGKS++HQPQ ISSSR
Sbjct: 183 APPLDYKEPEKPVASIKGKEQ--EAPYAEAEPKFSAFMGTGRRLDGKSSNHQPQPISSSR 242

Query: 242 SSDEKQSA---------QSAGSSSQNGTRRSLGKLVFGQNAPRNPKEAPKDATKESKQEQ 301
           SSDEKQS          QSAGSSS NGTR S GKLVFGQNA RNPKE  K+A+KESKQ+Q
Sbjct: 243 SSDEKQSGGNSRYGHSQQSAGSSSVNGTRHSEGKLVFGQNANRNPKETLKEASKESKQKQ 302

Query: 302 PEKDEPKFEPFSGKRYSLRG 313
           PEK++PKF+PFSGKRYSLRG
Sbjct: 303 PEKEDPKFQPFSGKRYSLRG 320

[Close]

BLAST of MS022115 vs. NCBI nr
Match: XP_023554070.1 (ubiquitin recognition factor in ER-associated degradation protein 1-like isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 541.6 bits (1394), Expect = 4.5e-150
Identity = 280/322 (86.96%), Postives = 292/322 (90.68%), Query Frame = 0


Query: 2   YFDGYGYRGTTFEHRYQCFSASFIDKPHIETGDRIIMPPSALDRLASLQIDYPMLFELRN 61
           YFDGYGYRGT+FE RYQCFSASFIDKPH+ETGDRIIMPPSALDRLASLQIDYPMLFE+RN
Sbjct: 2   YFDGYGYRGTSFEQRYQCFSASFIDKPHVETGDRIIMPPSALDRLASLQIDYPMLFEVRN 61

Query: 62  DAVERVSHCGVLEFVAEEGMIYMPYWMMENMLLPEGGLVHVKNVTLPKGTYVKLQPHTKD 121
           DAVERVSHCGVLEFVAEEGMIYMPYWMMENMLL EG LVHVKNVTLPKGTYVKLQPHTKD
Sbjct: 62  DAVERVSHCGVLEFVAEEGMIYMPYWMMENMLLQEGDLVHVKNVTLPKGTYVKLQPHTKD 121

Query: 122 FLDISNPKAILETTLRNFSCLSTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDF 181
           FLDISNPKAILETTLRNFSCL+TGDSIMVAYNNKKYYIDIVET+PSNAISIIETDCEVDF
Sbjct: 122 FLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETRPSNAISIIETDCEVDF 181

Query: 182 APPLDYKEPEKPVAPIKGKEQVAEAPAAEAEPKFSAFTGTGRRLDGKSASHQPQSISSSR 241
           APPLDYKEPEKPVAP KGKEQVAEA   EAEPKF AFTGTGRRLDGKS++HQPQ ISS+R
Sbjct: 182 APPLDYKEPEKPVAPTKGKEQVAEAIEPEAEPKFVAFTGTGRRLDGKSSNHQPQPISSAR 241

Query: 242 SSDEKQSA-----------QSAGSSSQNGTRRSLGKLVFGQNAPRNPKEAPKDATKESKQ 301
            SD KQS            QSAGSSS NGTRRS GKLVFG NA RNPKE PK+A+KESKQ
Sbjct: 242 PSDVKQSGGSSSSRYGHSQQSAGSSSVNGTRRSHGKLVFGHNAHRNPKENPKEASKESKQ 301

Query: 302 EQPEKDEPKFEPFSGKRYSLRG 313
           EQP K+EPKF+ FSGKRYSLRG
Sbjct: 302 EQPGKEEPKFQAFSGKRYSLRG 323

[Close]

BLAST of MS022115 vs. NCBI nr
Match: XP_008444838.1 (PREDICTED: ubiquitin fusion degradation protein 1 homolog isoform X1 [Cucumis melo])

HSP 1 Score: 537.7 bits (1384), Expect = 6.5e-149
Identity = 275/320 (85.94%), Postives = 291/320 (90.94%), Query Frame = 0


Query: 2   YFDGYGYRGTTFEHRYQCFSASFIDKPHIETGDRIIMPPSALDRLASLQIDYPMLFELRN 61
           YFDGYGYRGT+FE  YQCFS SFIDKPH+ETGDRIIMPPSALDRLASLQIDYPMLFELRN
Sbjct: 2   YFDGYGYRGTSFEQSYQCFSTSFIDKPHLETGDRIIMPPSALDRLASLQIDYPMLFELRN 61

Query: 62  DAVERVSHCGVLEFVAEEGMIYMPYWMMENMLLPEGGLVHVKNVTLPKGTYVKLQPHTKD 121
           DAVERVSHCGVLEFVAEEGMIYMPYWMMENMLL EG LV VKNV LPKGTYVKLQPHTKD
Sbjct: 62  DAVERVSHCGVLEFVAEEGMIYMPYWMMENMLLQEGDLVRVKNVPLPKGTYVKLQPHTKD 121

Query: 122 FLDISNPKAILETTLRNFSCLSTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDF 181
           FLDISNPKAILETTLRNFSCL+TGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDF
Sbjct: 122 FLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDF 181

Query: 182 APPLDYKEPEKPVAPIKGKEQVAEAPAAEAEPKFSAFTGTGRRLDGKSASHQPQSISSSR 241
           APPLDYKEPEKPVAP KGKEQVAEAP AEAEPKFSAFTGTGRRLDGKS++HQPQ ISSSR
Sbjct: 182 APPLDYKEPEKPVAPTKGKEQVAEAPDAEAEPKFSAFTGTGRRLDGKSSNHQPQPISSSR 241

Query: 242 SSDEKQSA---------QSAGSSSQNGTRRSLGKLVFGQNAPRNPKEAPKDATKESKQEQ 301
           S D KQS          QSAGSSS NG  +S GKLVFGQNA RNPKE PK+A++E+K++Q
Sbjct: 242 SGDAKQSGGRSRYGHSQQSAGSSSVNGAHQSQGKLVFGQNANRNPKETPKEASRENKKDQ 301

Query: 302 PEKDEPKFEPFSGKRYSLRG 313
            EK++PKF+PF+GKRYSLRG
Sbjct: 302 AEKEDPKFQPFTGKRYSLRG 321

[Close]

BLAST of MS022115 vs. ExPASy Swiss-Prot
Match: Q9ES53 (Ubiquitin recognition factor in ER-associated degradation protein 1 OS=Rattus norvegicus OX=10116 GN=Ufd1 PE=1 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 4.8e-62
Identity = 140/303 (46.20%), Postives = 187/303 (61.72%), Query Frame = 0


Query: 13  FEHRYQCFSASFI----DKPHIETGDRIIMPPSALDRLASLQIDYPMLFELRNDAVERVS 72
           F  +Y+CFS S +    D+  +E G +IIMPPSALD+L+ L I YPMLF+L N   +R++
Sbjct: 19  FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78

Query: 73  HCGVLEFVAEEGMIYMPYWMMENMLLPEGGLVHVKNVTLPKGTYVKLQPHTKDFLDISNP 132
           HCGVLEFVA+EG+ Y+P+WMM+N+LL EGGLV V++V L   TY K QP + DFLDI+NP
Sbjct: 79  HCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNP 138

Query: 133 KAILETTLRNFSCLSTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYK 192
           KA+LE  LRNF+CL+TGD I + YN K Y + ++ETKP  A+SIIE D  VDF  PL YK
Sbjct: 139 KAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYK 198

Query: 193 EPEKPVAPIKGKEQVAEAPAAEAEPKFSAFTGTGRRLDGKSASHQPQSISSSRSSDEKQS 252
           EPE+PV   +  E  A+      E  F AF+G+G RLDGK    +P S S  +  D K+ 
Sbjct: 199 EPERPVQHEESIEGEADHSGYAGEVGFRAFSGSGNRLDGKKKGVEP-SPSPIKPGDIKRG 258

Query: 253 AQSAGSSSQNGTRRSLGKLVFGQNAPRNPKEAPKDATKESKQEQPEKDEPKFEPFSGKRY 312
             +            LGK+ F +N+    K+  +D           +   +F  FSG+  
Sbjct: 259 IPN--------YEFKLGKITFIRNSRPMVKKVEED-----------EAGGRFVAFSGEGQ 301

[Close]

BLAST of MS022115 vs. ExPASy Swiss-Prot
Match: P70362 (Ubiquitin recognition factor in ER-associated degradation protein 1 OS=Mus musculus OX=10090 GN=Ufd1 PE=1 SV=2)

HSP 1 Score: 238.8 bits (608), Expect = 8.2e-62
Identity = 140/303 (46.20%), Postives = 187/303 (61.72%), Query Frame = 0


Query: 13  FEHRYQCFSASFI----DKPHIETGDRIIMPPSALDRLASLQIDYPMLFELRNDAVERVS 72
           F  +Y+CFS S +    D+  +E G +IIMPPSALD+L+ L I YPMLF+L N   +R++
Sbjct: 19  FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78

Query: 73  HCGVLEFVAEEGMIYMPYWMMENMLLPEGGLVHVKNVTLPKGTYVKLQPHTKDFLDISNP 132
           HCGVLEFVA+EG+ Y+P+WMM+N+LL EGGLV V++V L   TY K QP + DFLDI+NP
Sbjct: 79  HCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNP 138

Query: 133 KAILETTLRNFSCLSTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYK 192
           KA+LE  LRNF+CL+TGD I + YN K Y + ++ETKP  A+SIIE D  VDF  PL YK
Sbjct: 139 KAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYK 198

Query: 193 EPEKPVAPIKGKEQVAEAPAAEAEPKFSAFTGTGRRLDGKSASHQPQSISSSRSSDEKQS 252
           EPE+PV   +  E  A+      E  F AF+G+G RLDGK    +P S S  +  D K+ 
Sbjct: 199 EPERPVQHEESIEGEADHSGYAGEVGFRAFSGSGNRLDGKKKGVEP-SPSPIKPGDIKRG 258

Query: 253 AQSAGSSSQNGTRRSLGKLVFGQNAPRNPKEAPKDATKESKQEQPEKDEPKFEPFSGKRY 312
             +            LGK+ F +N+    K+  +D           +   +F  FSG+  
Sbjct: 259 IPN--------YEFKLGKITFIRNSRPLVKKVEED-----------EAGGRFIAFSGEGQ 301

[Close]

BLAST of MS022115 vs. ExPASy Swiss-Prot
Match: Q92890 (Ubiquitin recognition factor in ER-associated degradation protein 1 OS=Homo sapiens OX=9606 GN=UFD1 PE=1 SV=3)

HSP 1 Score: 236.5 bits (602), Expect = 4.1e-61
Identity = 139/303 (45.87%), Postives = 186/303 (61.39%), Query Frame = 0


Query: 13  FEHRYQCFSASFI----DKPHIETGDRIIMPPSALDRLASLQIDYPMLFELRNDAVERVS 72
           F  +Y+CFS S +    D+  +E G +IIMPPSALD+L+ L I YPMLF+L N   +R++
Sbjct: 19  FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78

Query: 73  HCGVLEFVAEEGMIYMPYWMMENMLLPEGGLVHVKNVTLPKGTYVKLQPHTKDFLDISNP 132
           HCGVLEFVA+EG+ Y+P+WMM+N+LL EGGLV V++V L   TY K QP + DFLDI+NP
Sbjct: 79  HCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNP 138

Query: 133 KAILETTLRNFSCLSTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYK 192
           KA+LE  LRNF+CL+TGD I + YN K Y + ++ETKP  A+SIIE D  VDF  PL YK
Sbjct: 139 KAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYK 198

Query: 193 EPEKPVAPIKGKEQVAEAPAAEAEPKFSAFTGTGRRLDGKSASHQPQSISSSRSSDEKQS 252
           EPE+ V   +  E  A+      E  F AF+G+G RLDGK    +P S S  +  D K+ 
Sbjct: 199 EPERQVQHEESTEGEADHSGYAGELGFRAFSGSGNRLDGKKKGVEP-SPSPIKPGDIKRG 258

Query: 253 AQSAGSSSQNGTRRSLGKLVFGQNAPRNPKEAPKDATKESKQEQPEKDEPKFEPFSGKRY 312
             +            LGK+ F +N+    K+  +D           +   +F  FSG+  
Sbjct: 259 IPN--------YEFKLGKITFIRNSRPLVKKVEED-----------EAGGRFVAFSGEGQ 301

[Close]

BLAST of MS022115 vs. ExPASy Swiss-Prot
Match: Q55BK0 (Ubiquitin fusion degradation protein 1 homolog OS=Dictyostelium discoideum OX=44689 GN=ufd1 PE=3 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 5.5e-58
Identity = 130/332 (39.16%), Postives = 190/332 (57.23%), Query Frame = 0


Query: 13  FEHRYQCFSASFI--DKPHIETGDRIIMPPSALDRLASLQIDYPMLFELRNDAVERVSHC 72
           +E +++ F  SF+  +K  +E+G +I++PPSAL+ L+ L I YPMLFE+ N    + SHC
Sbjct: 25  YEQKFKAFPISFLPKEKHSLESGGKILLPPSALNALSRLNIQYPMLFEISNPISGKKSHC 84

Query: 73  GVLEFVAEEGMIYMPYWMMENMLLPEGGLVHVKNVTLPKGTYVKLQPHTKDFLDISNPKA 132
           GVLEF+AEEG+ Y+P WMM+N+ L EG  + +KN TL KGT+VK+QP T +F+DISNPKA
Sbjct: 85  GVLEFIAEEGICYLPLWMMQNLQLKEGEFIDIKNATLAKGTFVKIQPRTSNFIDISNPKA 144

Query: 133 ILETTLRNFSCLSTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKEP 192
           +LE +LR F+ L+  D IM+ YNN KYY+ +VE KP+NAISIIE D  VDFAPP+D KE 
Sbjct: 145 VLENSLRKFATLTKDDEIMIDYNNTKYYLKVVELKPANAISIIEADVSVDFAPPMDSKEA 204

Query: 193 EKP------------------------VAPIKG----KEQVAEAPAAEAEPKFSAFTGTG 252
             P                          PI G    K++      ++ EPKF AF GTG
Sbjct: 205 TSPSTSSPGSHVSGPSKGLTFGPASTSAKPIPGGKKKKDESDSDSDSDDEPKFKAFAGTG 264

Query: 253 RRLDGKSAS---HQPQSISSSRSSDEKQSAQSAGSSSQNGTRRSLGKLVFGQNAPRNPKE 312
            RLDGK  +     P++++++ +++   +  +  +++ N                     
Sbjct: 265 ARLDGKVGTPLGTSPKTLNTNNNNNNNNNNNNNNNNNNN--------------------- 324

[Close]

BLAST of MS022115 vs. ExPASy Swiss-Prot
Match: Q9VTF9 (Ubiquitin fusion degradation protein 1 homolog OS=Drosophila melanogaster OX=7227 GN=Ufd1-like PE=2 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 8.0e-57
Identity = 114/241 (47.30%), Postives = 156/241 (64.73%), Query Frame = 0


Query: 2   YFDGYGY---RGTTFEHRYQCFSASFI---DKPHIETGDRIIMPPSALDRLASLQIDYPM 61
           +F G+      G  F   Y+CFS S +   ++  +E G +IIMPPSALD L  L ++YPM
Sbjct: 3   HFSGFNMMFPEGRNFHANYKCFSVSMLPGNERTDVEKGGKIIMPPSALDTLTRLNVEYPM 62

Query: 62  LFELRNDAVERVSHCGVLEFVAEEGMIYMPYWMMENMLLPEGGLVHVKNVTLPKGTYVKL 121
           LF+L N    R SH GVLEFVA+EG  Y+P+WMMEN+LL EG ++++++V+LP  T+ K 
Sbjct: 63  LFKLTNVKKSRSSHAGVLEFVADEGKCYLPHWMMENLLLGEGDILNIESVSLPVATFSKF 122

Query: 122 QPHTKDFLDISNPKAILETTLRNFSCLSTGDSIMVAYNNKKYYIDIVETKPSNAISIIET 181
           QPH+ DFLDI+NPKA+LE  LRNF+CL+ GD I + YN K Y + ++ETKP NA+SIIE 
Sbjct: 123 QPHSTDFLDITNPKAVLENALRNFACLTRGDVIAIKYNKKVYELCVLETKPGNAVSIIEC 182

Query: 182 DCEVDFAPPLDYKEPEKPVAPIKGKE--------QVAEAPAAEAEPKFSAFTGTGRRLDG 229
           D  V+F  P+ YK+  +  A   G++        ++A A  A  E     F G+G RLDG
Sbjct: 183 DMNVEFEAPVGYKDHSETQASGSGQQGAAGTVGGEIAGATNAILEEVVETFKGSGVRLDG 242

[Close]

BLAST of MS022115 vs. ExPASy TrEMBL
Match: A0A6J1C3Y9 (ubiquitin recognition factor in ER-associated degradation protein 1-like OS=Momordica charantia OX=3673 GN=LOC111007708 PE=3 SV=1)

HSP 1 Score: 605.9 bits (1561), Expect = 9.4e-170
Identity = 307/311 (98.71%), Postives = 308/311 (99.04%), Query Frame = 0


Query: 2   YFDGYGYRGTTFEHRYQCFSASFIDKPHIETGDRIIMPPSALDRLASLQIDYPMLFELRN 61
           YFDGYGYRGTTFEHRYQCFSASFIDKPHIETGDRIIMPPSALDRLASLQIDYPMLFELRN
Sbjct: 2   YFDGYGYRGTTFEHRYQCFSASFIDKPHIETGDRIIMPPSALDRLASLQIDYPMLFELRN 61

Query: 62  DAVERVSHCGVLEFVAEEGMIYMPYWMMENMLLPEGGLVHVKNVTLPKGTYVKLQPHTKD 121
           DAVERVSHCGVLEFVAEEGMIYMPYWMMENMLLPEGGLVHVKNVTLPKGTYVKLQPHTKD
Sbjct: 62  DAVERVSHCGVLEFVAEEGMIYMPYWMMENMLLPEGGLVHVKNVTLPKGTYVKLQPHTKD 121

Query: 122 FLDISNPKAILETTLRNFSCLSTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDF 181
           FLDISNPKAILETTLRNFSCLSTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDF
Sbjct: 122 FLDISNPKAILETTLRNFSCLSTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDF 181

Query: 182 APPLDYKEPEKPVAPIKGKEQVAEAPAAEAEPKFSAFTGTGRRLDGKSASHQPQSISSSR 241
           APPLDYKEPEKPV PIKGKEQVAEAPAAEAEPKF+AFTGTGRRLDGKS SHQPQSISSSR
Sbjct: 182 APPLDYKEPEKPVVPIKGKEQVAEAPAAEAEPKFNAFTGTGRRLDGKSVSHQPQSISSSR 241

Query: 242 SSDEKQSAQSAGSSSQNGTRRSLGKLVFGQNAPRNPKEAPKDATKESKQEQPEKDEPKFE 301
           SSDEKQSAQSAGSSSQNGTRRS GKLVFGQNAPRNPKEAPKDATKESKQEQPEKDEPKFE
Sbjct: 242 SSDEKQSAQSAGSSSQNGTRRSQGKLVFGQNAPRNPKEAPKDATKESKQEQPEKDEPKFE 301

Query: 302 PFSGKRYSLRG 313
           PFSGKRYSLRG
Sbjct: 302 PFSGKRYSLRG 312

[Close]

BLAST of MS022115 vs. ExPASy TrEMBL
Match: A0A1S3BAT8 (ubiquitin fusion degradation protein 1 homolog isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488062 PE=3 SV=1)

HSP 1 Score: 537.7 bits (1384), Expect = 3.2e-149
Identity = 275/320 (85.94%), Postives = 291/320 (90.94%), Query Frame = 0


Query: 2   YFDGYGYRGTTFEHRYQCFSASFIDKPHIETGDRIIMPPSALDRLASLQIDYPMLFELRN 61
           YFDGYGYRGT+FE  YQCFS SFIDKPH+ETGDRIIMPPSALDRLASLQIDYPMLFELRN
Sbjct: 2   YFDGYGYRGTSFEQSYQCFSTSFIDKPHLETGDRIIMPPSALDRLASLQIDYPMLFELRN 61

Query: 62  DAVERVSHCGVLEFVAEEGMIYMPYWMMENMLLPEGGLVHVKNVTLPKGTYVKLQPHTKD 121
           DAVERVSHCGVLEFVAEEGMIYMPYWMMENMLL EG LV VKNV LPKGTYVKLQPHTKD
Sbjct: 62  DAVERVSHCGVLEFVAEEGMIYMPYWMMENMLLQEGDLVRVKNVPLPKGTYVKLQPHTKD 121

Query: 122 FLDISNPKAILETTLRNFSCLSTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDF 181
           FLDISNPKAILETTLRNFSCL+TGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDF
Sbjct: 122 FLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDF 181

Query: 182 APPLDYKEPEKPVAPIKGKEQVAEAPAAEAEPKFSAFTGTGRRLDGKSASHQPQSISSSR 241
           APPLDYKEPEKPVAP KGKEQVAEAP AEAEPKFSAFTGTGRRLDGKS++HQPQ ISSSR
Sbjct: 182 APPLDYKEPEKPVAPTKGKEQVAEAPDAEAEPKFSAFTGTGRRLDGKSSNHQPQPISSSR 241

Query: 242 SSDEKQSA---------QSAGSSSQNGTRRSLGKLVFGQNAPRNPKEAPKDATKESKQEQ 301
           S D KQS          QSAGSSS NG  +S GKLVFGQNA RNPKE PK+A++E+K++Q
Sbjct: 242 SGDAKQSGGRSRYGHSQQSAGSSSVNGAHQSQGKLVFGQNANRNPKETPKEASRENKKDQ 301

Query: 302 PEKDEPKFEPFSGKRYSLRG 313
            EK++PKF+PF+GKRYSLRG
Sbjct: 302 AEKEDPKFQPFTGKRYSLRG 321

[Close]

BLAST of MS022115 vs. ExPASy TrEMBL
Match: A0A6J1I2L0 (ubiquitin recognition factor in ER-associated degradation protein 1-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111468441 PE=3 SV=1)

HSP 1 Score: 537.3 bits (1383), Expect = 4.1e-149
Identity = 280/323 (86.69%), Postives = 293/323 (90.71%), Query Frame = 0


Query: 2   YFDGYGYRGTTFEHRYQCFSASFIDKPHIETGDRIIMPPSALDRLASLQIDYPMLFELRN 61
           YFDGYGYRGT+FE RYQCFSASFIDKPH+ETGDRIIMPPSALDRLASLQIDYPMLFE RN
Sbjct: 2   YFDGYGYRGTSFEQRYQCFSASFIDKPHVETGDRIIMPPSALDRLASLQIDYPMLFEFRN 61

Query: 62  DAVERVSHCGVLEFVAEEGMIYMPYWMMENMLLPEGGLVHVKNVTLPKGTYVKLQPHTKD 121
           DAVERVSHCGVLEFVAEEGMIYMPYWMMENMLL EG LVHVKNVTLPKGTYVKLQPHTKD
Sbjct: 62  DAVERVSHCGVLEFVAEEGMIYMPYWMMENMLLQEGDLVHVKNVTLPKGTYVKLQPHTKD 121

Query: 122 FLDISNPKAILETTLRNFSCLSTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDF 181
           FLDISNPKAILETTLRNFSCL+TGDSIMVAYNNKKYYIDIVET+PSNAISIIETDCEVDF
Sbjct: 122 FLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETRPSNAISIIETDCEVDF 181

Query: 182 APPLDYKEPEKPVAPIKGKEQVAEAPAAEAEPKFSAFTGTGRRLDGKSASHQPQSISS-S 241
           APPLDYKEPEKPVAP KGKEQVAEA   EAEPKF AFTGTGRRLDGKS+++QPQ ISS +
Sbjct: 182 APPLDYKEPEKPVAPTKGKEQVAEAIEPEAEPKFVAFTGTGRRLDGKSSNYQPQPISSAA 241

Query: 242 RSSDEKQSA-----------QSAGSSSQNGTRRSLGKLVFGQNAPRNPKEAPKDATKESK 301
           R SD KQS            QSAGSSS NGTRRS GKLVFGQNA RNPKE+PK+A+KESK
Sbjct: 242 RPSDVKQSGGSSSSRYGHSQQSAGSSSVNGTRRSHGKLVFGQNAHRNPKESPKEASKESK 301

Query: 302 QEQPEKDEPKFEPFSGKRYSLRG 313
           QEQP K+EPKF+ FSGKRYSLRG
Sbjct: 302 QEQPGKEEPKFQAFSGKRYSLRG 324

[Close]

BLAST of MS022115 vs. ExPASy TrEMBL
Match: A0A1S3BJQ5 (ubiquitin fusion degradation protein 1 homolog isoform X3 OS=Cucumis melo OX=3656 GN=LOC103490342 PE=3 SV=1)

HSP 1 Score: 537.0 bits (1382), Expect = 5.4e-149
Identity = 275/320 (85.94%), Postives = 290/320 (90.62%), Query Frame = 0


Query: 2   YFDGYGYRGTTFEHRYQCFSASFIDKPHIETGDRIIMPPSALDRLASLQIDYPMLFELRN 61
           YFDGYGYRGT+FE  YQCFS SFIDKPH+ETGDRIIMPPSALDRLASLQIDYPMLFELRN
Sbjct: 2   YFDGYGYRGTSFEQSYQCFSTSFIDKPHLETGDRIIMPPSALDRLASLQIDYPMLFELRN 61

Query: 62  DAVERVSHCGVLEFVAEEGMIYMPYWMMENMLLPEGGLVHVKNVTLPKGTYVKLQPHTKD 121
           DAVERVSHCGVLEFVAEEGMIYMPYWMMENMLL EG LV VKNV LPKGTYVKLQPHTKD
Sbjct: 62  DAVERVSHCGVLEFVAEEGMIYMPYWMMENMLLQEGDLVRVKNVPLPKGTYVKLQPHTKD 121

Query: 122 FLDISNPKAILETTLRNFSCLSTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDF 181
           FLDISNPKAILETTLRNFSCL+TGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDF
Sbjct: 122 FLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDF 181

Query: 182 APPLDYKEPEKPVAPIKGKEQVAEAPAAEAEPKFSAFTGTGRRLDGKSASHQPQSISSSR 241
           APPLDYKEPEKPVAP KGKEQVAEAP AEAEPKFSAFTGTGRRLDGKS++HQPQ ISSSR
Sbjct: 182 APPLDYKEPEKPVAPTKGKEQVAEAPDAEAEPKFSAFTGTGRRLDGKSSNHQPQPISSSR 241

Query: 242 SSDEKQ---------SAQSAGSSSQNGTRRSLGKLVFGQNAPRNPKEAPKDATKESKQEQ 301
           S D KQ         S QSAGSSS NG  +S GKLVFGQNA RNPKE PK+ +KESK+++
Sbjct: 242 SGDAKQLGGRSRYGHSQQSAGSSSVNGAHQSQGKLVFGQNANRNPKETPKETSKESKKDE 301

Query: 302 PEKDEPKFEPFSGKRYSLRG 313
            EK++PKF+PF+GKRYSLRG
Sbjct: 302 AEKEDPKFQPFTGKRYSLRG 321

[Close]

BLAST of MS022115 vs. ExPASy TrEMBL
Match: A0A6J1IGH0 (ubiquitin recognition factor in ER-associated degradation protein 1-like isoform X5 OS=Cucurbita maxima OX=3661 GN=LOC111474528 PE=3 SV=1)

HSP 1 Score: 534.3 bits (1375), Expect = 3.5e-148
Identity = 279/323 (86.38%), Postives = 291/323 (90.09%), Query Frame = 0


Query: 2   YFDGYGYRGTTFEHRYQCFSASFIDKPHIETGDRIIMPPSALDRLASLQIDYPMLFELRN 61
           YFDGYGYRGT+FE RYQCFSASFIDKPH+ETGDRIIMPPSALDRLASLQIDYPMLFE RN
Sbjct: 2   YFDGYGYRGTSFEQRYQCFSASFIDKPHVETGDRIIMPPSALDRLASLQIDYPMLFEFRN 61

Query: 62  DAVERVSHCGVLEFVAEEGMIYMPYWMMENMLLPEGGLVHVKNVTLPKGTYVKLQPHTKD 121
           DAVERVSHCGVLEFVAEEGMIYMPYWMMENMLL EG LVHVKNVTLPKGTYVKLQPHTKD
Sbjct: 62  DAVERVSHCGVLEFVAEEGMIYMPYWMMENMLLQEGDLVHVKNVTLPKGTYVKLQPHTKD 121

Query: 122 FLDISNPKAILETTLRNFSCLSTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDF 181
           FLDISNPKAILETTLRNFSCL+TGDSIMVAYNNKKYYIDIVET+PSNAISIIETDCEVDF
Sbjct: 122 FLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETRPSNAISIIETDCEVDF 181

Query: 182 APPLDYKEPEKPVAPIKGKEQVAEAPAAEAEPKFSAFTGTGRRLDGKSASHQPQSISS-S 241
           APPLDYKEPEKPVAP KGKEQVAEA   EAEPKF AFTGTGRRLDGKS+++QPQ ISS +
Sbjct: 182 APPLDYKEPEKPVAPTKGKEQVAEAIEPEAEPKFVAFTGTGRRLDGKSSNYQPQPISSAA 241

Query: 242 RSSDEKQSA-----------QSAGSSSQNGTRRSLGKLVFGQNAPRNPKEAPKDATKESK 301
           R SD KQS            QSAGSSS NGTRRS GKLVFGQNA RNP E PK+A+KESK
Sbjct: 242 RPSDVKQSGGSSSSRYGHSQQSAGSSSVNGTRRSHGKLVFGQNAHRNPNENPKEASKESK 301

Query: 302 QEQPEKDEPKFEPFSGKRYSLRG 313
           QEQP K+EPKF+ FSGKRYSLRG
Sbjct: 302 QEQPGKEEPKFQAFSGKRYSLRG 324

[Close]

BLAST of MS022115 vs. TAIR 10
Match: AT2G21270.1 (ubiquitin fusion degradation 1 )

HSP 1 Score: 419.1 bits (1076), Expect = 3.2e-117
Identity = 221/318 (69.50%), Postives = 256/318 (80.50%), Query Frame = 0


Query: 2   YFDGYGYRGTTFEHRYQCFSASFIDKPHIETGDRIIMPPSALDRLASLQIDYPMLFELRN 61
           +FDGY Y GTTFE  Y+C+ ASFIDKP +E+GD+IIMPPSALDRLASL IDYPMLFELRN
Sbjct: 2   FFDGYHYHGTTFEQSYRCYPASFIDKPQLESGDKIIMPPSALDRLASLHIDYPMLFELRN 61

Query: 62  DAVERVSHCGVLEFVAEEGMIYMPYWMMENMLLPEGGLVHVKNVTLPKGTYVKLQPHTKD 121
             +ERV+HCGVLEF+AEEGMIYMPYWMM+N+LL EG +V V+NVTLPKGTYVKLQPHT D
Sbjct: 62  AGIERVTHCGVLEFIAEEGMIYMPYWMMQNLLLQEGDIVRVRNVTLPKGTYVKLQPHTTD 121

Query: 122 FLDISNPKAILETTLRNFSCLSTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDF 181
           FLDISNPKAILET LRN+SCL++GDSIMV YNNKKY+IDIVETKP+NAISIIETDCEVDF
Sbjct: 122 FLDISNPKAILETALRNYSCLTSGDSIMVPYNNKKYFIDIVETKPANAISIIETDCEVDF 181

Query: 182 APPLDYKEPEKPVAPIKGKEQV-AEAPAAEAEPKFSAFTGTGRRLDGKSASHQPQSISSS 241
           APPLDYKEPE+P AP   K    AE    E EPKF+ FTG+GRRLDG+  +++P   SSS
Sbjct: 182 APPLDYKEPERPTAPSAAKGPAKAEEVVDEPEPKFNPFTGSGRRLDGRPLAYEPAPASSS 241

Query: 242 RSSD---EKQSAQSAGSSSQNGTRRSLGKLVFGQNAPRNPKE-APK-DATKES-KQEQPE 301
           +         + QS+ +SS     R+ GKLVFG N  R PKE APK  A KE+ K+EQ +
Sbjct: 242 KGKQPVVANGNGQSSVASSSEKATRAQGKLVFGANGNRAPKEAAPKVGAAKETKKEEQEK 301

Query: 302 KDEPKFEPFSGKRYSLRG 313
           KDEPKF+ FSGK+YSLRG
Sbjct: 302 KDEPKFQAFSGKKYSLRG 319

[Close]

BLAST of MS022115 vs. TAIR 10
Match: AT2G21270.2 (ubiquitin fusion degradation 1 )

HSP 1 Score: 419.1 bits (1076), Expect = 3.2e-117
Identity = 221/318 (69.50%), Postives = 256/318 (80.50%), Query Frame = 0


Query: 2   YFDGYGYRGTTFEHRYQCFSASFIDKPHIETGDRIIMPPSALDRLASLQIDYPMLFELRN 61
           +FDGY Y GTTFE  Y+C+ ASFIDKP +E+GD+IIMPPSALDRLASL IDYPMLFELRN
Sbjct: 2   FFDGYHYHGTTFEQSYRCYPASFIDKPQLESGDKIIMPPSALDRLASLHIDYPMLFELRN 61

Query: 62  DAVERVSHCGVLEFVAEEGMIYMPYWMMENMLLPEGGLVHVKNVTLPKGTYVKLQPHTKD 121
             +ERV+HCGVLEF+AEEGMIYMPYWMM+N+LL EG +V V+NVTLPKGTYVKLQPHT D
Sbjct: 62  AGIERVTHCGVLEFIAEEGMIYMPYWMMQNLLLQEGDIVRVRNVTLPKGTYVKLQPHTTD 121

Query: 122 FLDISNPKAILETTLRNFSCLSTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDF 181
           FLDISNPKAILET LRN+SCL++GDSIMV YNNKKY+IDIVETKP+NAISIIETDCEVDF
Sbjct: 122 FLDISNPKAILETALRNYSCLTSGDSIMVPYNNKKYFIDIVETKPANAISIIETDCEVDF 181

Query: 182 APPLDYKEPEKPVAPIKGKEQV-AEAPAAEAEPKFSAFTGTGRRLDGKSASHQPQSISSS 241
           APPLDYKEPE+P AP   K    AE    E EPKF+ FTG+GRRLDG+  +++P   SSS
Sbjct: 182 APPLDYKEPERPTAPSAAKGPAKAEEVVDEPEPKFNPFTGSGRRLDGRPLAYEPAPASSS 241

Query: 242 RSSD---EKQSAQSAGSSSQNGTRRSLGKLVFGQNAPRNPKE-APK-DATKES-KQEQPE 301
           +         + QS+ +SS     R+ GKLVFG N  R PKE APK  A KE+ K+EQ +
Sbjct: 242 KGKQPVVANGNGQSSVASSSEKATRAQGKLVFGANGNRAPKEAAPKVGAAKETKKEEQEK 301

Query: 302 KDEPKFEPFSGKRYSLRG 313
           KDEPKF+ FSGK+YSLRG
Sbjct: 302 KDEPKFQAFSGKKYSLRG 319

[Close]

BLAST of MS022115 vs. TAIR 10
Match: AT2G21270.3 (ubiquitin fusion degradation 1 )

HSP 1 Score: 419.1 bits (1076), Expect = 3.2e-117
Identity = 221/318 (69.50%), Postives = 256/318 (80.50%), Query Frame = 0


Query: 2   YFDGYGYRGTTFEHRYQCFSASFIDKPHIETGDRIIMPPSALDRLASLQIDYPMLFELRN 61
           +FDGY Y GTTFE  Y+C+ ASFIDKP +E+GD+IIMPPSALDRLASL IDYPMLFELRN
Sbjct: 23  FFDGYHYHGTTFEQSYRCYPASFIDKPQLESGDKIIMPPSALDRLASLHIDYPMLFELRN 82

Query: 62  DAVERVSHCGVLEFVAEEGMIYMPYWMMENMLLPEGGLVHVKNVTLPKGTYVKLQPHTKD 121
             +ERV+HCGVLEF+AEEGMIYMPYWMM+N+LL EG +V V+NVTLPKGTYVKLQPHT D
Sbjct: 83  AGIERVTHCGVLEFIAEEGMIYMPYWMMQNLLLQEGDIVRVRNVTLPKGTYVKLQPHTTD 142

Query: 122 FLDISNPKAILETTLRNFSCLSTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDF 181
           FLDISNPKAILET LRN+SCL++GDSIMV YNNKKY+IDIVETKP+NAISIIETDCEVDF
Sbjct: 143 FLDISNPKAILETALRNYSCLTSGDSIMVPYNNKKYFIDIVETKPANAISIIETDCEVDF 202

Query: 182 APPLDYKEPEKPVAPIKGKEQV-AEAPAAEAEPKFSAFTGTGRRLDGKSASHQPQSISSS 241
           APPLDYKEPE+P AP   K    AE    E EPKF+ FTG+GRRLDG+  +++P   SSS
Sbjct: 203 APPLDYKEPERPTAPSAAKGPAKAEEVVDEPEPKFNPFTGSGRRLDGRPLAYEPAPASSS 262

Query: 242 RSSD---EKQSAQSAGSSSQNGTRRSLGKLVFGQNAPRNPKE-APK-DATKES-KQEQPE 301
           +         + QS+ +SS     R+ GKLVFG N  R PKE APK  A KE+ K+EQ +
Sbjct: 263 KGKQPVVANGNGQSSVASSSEKATRAQGKLVFGANGNRAPKEAAPKVGAAKETKKEEQEK 322

Query: 302 KDEPKFEPFSGKRYSLRG 313
           KDEPKF+ FSGK+YSLRG
Sbjct: 323 KDEPKFQAFSGKKYSLRG 340

[Close]

BLAST of MS022115 vs. TAIR 10
Match: AT4G38930.2 (Ubiquitin fusion degradation UFD1 family protein )

HSP 1 Score: 415.6 bits (1067), Expect = 3.5e-116
Identity = 210/314 (66.88%), Postives = 253/314 (80.57%), Query Frame = 0


Query: 2   YFDGYGYRGTTFEHRYQCFSASFIDKPHIETGDRIIMPPSALDRLASLQIDYPMLFELRN 61
           ++DGY Y GTTFE  Y+C+ +SFIDKP IE+GD+IIMPPSALDRLASLQIDYPMLFELRN
Sbjct: 2   FYDGYAYHGTTFEQTYRCYPSSFIDKPQIESGDKIIMPPSALDRLASLQIDYPMLFELRN 61

Query: 62  DAVERVSHCGVLEFVAEEGMIYMPYWMMENMLLPEGGLVHVKNVTLPKGTYVKLQPHTKD 121
            + +  SHCGVLEF+AEEG+IY+PYWMM+N+LL EG +V V+NVTLPKGTYVKLQPHT D
Sbjct: 62  ASTDSFSHCGVLEFIAEEGVIYIPYWMMQNLLLQEGDMVRVRNVTLPKGTYVKLQPHTTD 121

Query: 122 FLDISNPKAILETTLRNFSCLSTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDF 181
           FLDI+NPKAILET LRN+SCL+ GDSIMV YNNKKY+IDIVE KPSN ISIIETDCEVDF
Sbjct: 122 FLDIANPKAILETALRNYSCLTVGDSIMVPYNNKKYFIDIVEAKPSNGISIIETDCEVDF 181

Query: 182 APPLDYKEPEKPV--APIKGKEQVAEAPAAEAEPKFSAFTGTGRRLDGKSASHQPQSISS 241
           APPLDYKEPE+PV  AP KG+ +  E   AEAEPKF+ FTG+GRRLDG+  S++PQ  ++
Sbjct: 182 APPLDYKEPERPVAPAPAKGEAKAKEVDVAEAEPKFNPFTGSGRRLDGRPLSYEPQPGAA 241

Query: 242 SRSSDEKQSAQSAGSSSQNGTRRSLGKLVFGQNAPRNPKEAPK-DATKESKQEQPEKDEP 301
           + +      A S+ S S+  T+++ GKLVFG N  R+ KE  K  A K+ KQE+  + E 
Sbjct: 242 NSNGQSHPVASSSSSGSEKATQQNRGKLVFGSNVERSTKETTKVGAGKDRKQEEEAEKEA 301

Query: 302 KFEPFSGKRYSLRG 313
           KF+ FSGK+YSLRG
Sbjct: 302 KFQAFSGKKYSLRG 315

[Close]

BLAST of MS022115 vs. TAIR 10
Match: AT4G38930.1 (Ubiquitin fusion degradation UFD1 family protein )

HSP 1 Score: 412.9 bits (1060), Expect = 2.3e-115
Identity = 209/312 (66.99%), Postives = 251/312 (80.45%), Query Frame = 0


Query: 2   YFDGYGYRGTTFEHRYQCFSASFIDKPHIETGDRIIMPPSALDRLASLQIDYPMLFELRN 61
           ++DGY Y GTTFE  Y+C+ +SFIDKP IE+GD+IIMPPSALDRLASLQIDYPMLFELRN
Sbjct: 2   FYDGYAYHGTTFEQTYRCYPSSFIDKPQIESGDKIIMPPSALDRLASLQIDYPMLFELRN 61

Query: 62  DAVERVSHCGVLEFVAEEGMIYMPYWMMENMLLPEGGLVHVKNVTLPKGTYVKLQPHTKD 121
            + +  SHCGVLEF+AEEG+IY+PYWMM+N+LL EG +V V+NVTLPKGTYVKLQPHT D
Sbjct: 62  ASTDSFSHCGVLEFIAEEGVIYIPYWMMQNLLLQEGDMVRVRNVTLPKGTYVKLQPHTTD 121

Query: 122 FLDISNPKAILETTLRNFSCLSTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDF 181
           FLDI+NPKAILET LRN+SCL+ GDSIMV YNNKKY+IDIVE KPSN ISIIETDCEVDF
Sbjct: 122 FLDIANPKAILETALRNYSCLTVGDSIMVPYNNKKYFIDIVEAKPSNGISIIETDCEVDF 181

Query: 182 APPLDYKEPEKPVAPIKGKEQVAEAPAAEAEPKFSAFTGTGRRLDGKSASHQPQSISSSR 241
           APPLDYKEPE+PVAP   K +  E   AEAEPKF+ FTG+GRRLDG+  S++PQ  +++ 
Sbjct: 182 APPLDYKEPERPVAPAPAKAK--EVDVAEAEPKFNPFTGSGRRLDGRPLSYEPQPGAANS 241

Query: 242 SSDEKQSAQSAGSSSQNGTRRSLGKLVFGQNAPRNPKEAPK-DATKESKQEQPEKDEPKF 301
           +      A S+ S S+  T+++ GKLVFG N  R+ KE  K  A K+ KQE+  + E KF
Sbjct: 242 NGQSHPVASSSSSGSEKATQQNRGKLVFGSNVERSTKETTKVGAGKDRKQEEEAEKEAKF 301

Query: 302 EPFSGKRYSLRG 313
           + FSGK+YSLRG
Sbjct: 302 QAFSGKKYSLRG 311

The following BLAST results are available for this feature:

BLAST of MS022115 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022135862.1	2.0e-169	98.71	ubiquitin recognition factor in ER-associated degradation protein 1-like [Momord...	[more]
XP_038887743.1	3.3e-153	89.38	ubiquitin recognition factor in ER-associated degradation protein 1-like isoform...	[more]
XP_038887744.1	9.1e-151	88.75	ubiquitin recognition factor in ER-associated degradation protein 1-like isoform...	[more]
XP_023554070.1	4.5e-150	86.96	ubiquitin recognition factor in ER-associated degradation protein 1-like isoform...	[more]
XP_008444838.1	6.5e-149	85.94	PREDICTED: ubiquitin fusion degradation protein 1 homolog isoform X1 [Cucumis me...	[more]

BLAST of MS022115 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ES53	4.8e-62	46.20	Ubiquitin recognition factor in ER-associated degradation protein 1 OS=Rattus no...	[more]
P70362	8.2e-62	46.20	Ubiquitin recognition factor in ER-associated degradation protein 1 OS=Mus muscu...	[more]
Q92890	4.1e-61	45.87	Ubiquitin recognition factor in ER-associated degradation protein 1 OS=Homo sapi...	[more]
Q55BK0	5.5e-58	39.16	Ubiquitin fusion degradation protein 1 homolog OS=Dictyostelium discoideum OX=44...	[more]
Q9VTF9	8.0e-57	47.30	Ubiquitin fusion degradation protein 1 homolog OS=Drosophila melanogaster OX=722...	[more]

BLAST of MS022115 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C3Y9	9.4e-170	98.71	ubiquitin recognition factor in ER-associated degradation protein 1-like OS=Momo...	[more]
A0A1S3BAT8	3.2e-149	85.94	ubiquitin fusion degradation protein 1 homolog isoform X1 OS=Cucumis melo OX=365...	[more]
A0A6J1I2L0	4.1e-149	86.69	ubiquitin recognition factor in ER-associated degradation protein 1-like isoform...	[more]
A0A1S3BJQ5	5.4e-149	85.94	ubiquitin fusion degradation protein 1 homolog isoform X3 OS=Cucumis melo OX=365...	[more]
A0A6J1IGH0	3.5e-148	86.38	ubiquitin recognition factor in ER-associated degradation protein 1-like isoform...	[more]

BLAST of MS022115 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G21270.1	3.2e-117	69.50	ubiquitin fusion degradation 1	[more]
AT2G21270.2	3.2e-117	69.50	ubiquitin fusion degradation 1	[more]
AT2G21270.3	3.2e-117	69.50	ubiquitin fusion degradation 1	[more]
AT4G38930.2	3.5e-116	66.88	Ubiquitin fusion degradation UFD1 family protein	[more]
AT4G38930.1	2.3e-115	66.99	Ubiquitin fusion degradation UFD1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR042299	Ufd1-like, Nn domain	GENE3D	2.40.40.50		coord: 7..107 e-value: 1.4E-40 score: 139.2
None	No IPR available	GENE3D	3.10.330.10		coord: 109..182 e-value: 3.4E-34 score: 118.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 279..306
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 226..265
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 200..312
None	No IPR available	PANTHER	PTHR12555:SF23	UBIQUITIN FUSION DEGRADATION PROTEIN 1 HOMOLOG	coord: 1..312
IPR004854	Ubiquitin fusion degradation protein Ufd1-like	PFAM	PF03152	UFD1	coord: 13..184 e-value: 4.6E-76 score: 254.1
IPR004854	Ubiquitin fusion degradation protein Ufd1-like	PANTHER	PTHR12555	UBIQUITIN FUSION DEGRADATON PROTEIN 1	coord: 1..312

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS022115.1	MS022115.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process