MS022101 (gene) Bitter gourd (TR) v1

Overview


Name	MS022101
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	B-box zinc finger family protein
Location	scaffold47: 878939 .. 879839 (+)
RNA-Seq Expression	MS022101
Synteny	MS022101

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGATCCGTTGCGATGTCTGTGATAAAGCGGAAGCCGCTGTATTCTGCTCCGCCGATGAAGCCGCTCTCTGCCATGGCTGCGATCTCCAGGTCCACCAGGCGAACAAGCTCGCCGGCAAGCACTCCCGATTTTCGCTGCTTCAGCCGATCGTAACGGAATCTCCTATCTGCGATATCTGTCAGGTAATTTTTTTTTTTTATTTCAGTTCTGGAAGTGTCCTGTGCGACTTGATTCCCGATTTTTCGGTTACTGTCGAGCTGGACGAATGTTGCAGAGAATCTTTGCGATTTTGTATCTTTCTCGGAAATATCTACTTTCTTTTGTCCGTTTCTCATCTCGTTCTTCGGCTGTTGAGTTTTTGCGATTGACGATCGGTGATGCGGAGTGAGAAGGAGAAGATTTGTAGTGAAATTGATTTTTGATTATTTCCGTTTGCAGGAACGGCGCGCGCTCGTATTCTGTCAACAAGATAGGGCGATTCTTTGCAGAGAATGCGACATTTCAATTCATGAAGCGAACGAACATACGCAGAAGCACAGCAGATTTCTTCTCACAGGTGTGAAGCTTTCTCCGACTTGTTTTTCGTACCAAACATCTTCCTCCTCCGATGGCTGTGATGCCGCCATGGATGTTAAAACTGGAAGCTCCCACGCTTGCAGCAAGAGGCCTAAAACGGCCACGAAAGAAATCTCCAGCTCTCATTCCGCTGAAAAAGCAGCTCCGTCGACAAGTAATTACAAGGCCGAAGACGGCCAAGCGAGCGACGGCGGTTCGCTCTCGACGAGCAGCATATCGGAGTATCTGGAGACACTACCGGGATGGTGCGTGGAGGAATTTCTCGATCCTTCCGCGGCCGCCGCCAATCGTTTCTGTAAGGTTTGCAGTACACCCTCTGTG

mRNA sequence

ATGAAGATCCGTTGCGATGTCTGTGATAAAGCGGAAGCCGCTGTATTCTGCTCCGCCGATGAAGCCGCTCTCTGCCATGGCTGCGATCTCCAGGTCCACCAGGCGAACAAGCTCGCCGGCAAGCACTCCCGATTTTCGCTGCTTCAGCCGATCGTAACGGAATCTCCTATCTGCGATATCTGTCAGGAACGGCGCGCGCTCGTATTCTGTCAACAAGATAGGGCGATTCTTTGCAGAGAATGCGACATTTCAATTCATGAAGCGAACGAACATACGCAGAAGCACAGCAGATTTCTTCTCACAGGTGTGAAGCTTTCTCCGACTTGTTTTTCGTACCAAACATCTTCCTCCTCCGATGGCTGTGATGCCGCCATGGATGTTAAAACTGGAAGCTCCCACGCTTGCAGCAAGAGGCCTAAAACGGCCACGAAAGAAATCTCCAGCTCTCATTCCGCTGAAAAAGCAGCTCCGTCGACAAGTAATTACAAGGCCGAAGACGGCCAAGCGAGCGACGGCGGTTCGCTCTCGACGAGCAGCATATCGGAGTATCTGGAGACACTACCGGGATGGTGCGTGGAGGAATTTCTCGATCCTTCCGCGGCCGCCGCCAATCGTTTCTGTAAGGTTTGCAGTACACCCTCTGTG

Coding sequence (CDS)

ATGAAGATCCGTTGCGATGTCTGTGATAAAGCGGAAGCCGCTGTATTCTGCTCCGCCGATGAAGCCGCTCTCTGCCATGGCTGCGATCTCCAGGTCCACCAGGCGAACAAGCTCGCCGGCAAGCACTCCCGATTTTCGCTGCTTCAGCCGATCGTAACGGAATCTCCTATCTGCGATATCTGTCAGGAACGGCGCGCGCTCGTATTCTGTCAACAAGATAGGGCGATTCTTTGCAGAGAATGCGACATTTCAATTCATGAAGCGAACGAACATACGCAGAAGCACAGCAGATTTCTTCTCACAGGTGTGAAGCTTTCTCCGACTTGTTTTTCGTACCAAACATCTTCCTCCTCCGATGGCTGTGATGCCGCCATGGATGTTAAAACTGGAAGCTCCCACGCTTGCAGCAAGAGGCCTAAAACGGCCACGAAAGAAATCTCCAGCTCTCATTCCGCTGAAAAAGCAGCTCCGTCGACAAGTAATTACAAGGCCGAAGACGGCCAAGCGAGCGACGGCGGTTCGCTCTCGACGAGCAGCATATCGGAGTATCTGGAGACACTACCGGGATGGTGCGTGGAGGAATTTCTCGATCCTTCCGCGGCCGCCGCCAATCGTTTCTGTAAGGTTTGCAGTACACCCTCTGTG

Protein sequence

MKIRCDVCDKAEAAVFCSADEAALCHGCDLQVHQANKLAGKHSRFSLLQPIVTESPICDICQERRALVFCQQDRAILCRECDISIHEANEHTQKHSRFLLTGVKLSPTCFSYQTSSSSDGCDAAMDVKTGSSHACSKRPKTATKEISSSHSAEKAAPSTSNYKAEDGQASDGGSLSTSSISEYLETLPGWCVEEFLDPSAAAANRFCKVCSTPSV

Homology

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BLAST of MS022101 vs. NCBI nr
Match: XP_022135715.1 (B-box zinc finger protein 20 isoform X1 [Momordica charantia])

HSP 1 Score: 415.6 bits (1067), Expect = 2.6e-112
Identity = 207/208 (99.52%), Postives = 207/208 (99.52%), Query Frame = 0


Query: 1   MKIRCDVCDKAEAAVFCSADEAALCHGCDLQVHQANKLAGKHSRFSLLQPIVTESPICDI 60
           MKIRCDVCDKAEAAVFCSADEAALCHGCDLQVHQANKLAGKHSRFSLLQPIVTESPICDI
Sbjct: 1   MKIRCDVCDKAEAAVFCSADEAALCHGCDLQVHQANKLAGKHSRFSLLQPIVTESPICDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHEANEHTQKHSRFLLTGVKLSPTCFSYQTSSSSDG 120
           CQERRALVFCQQDRAILCRECDISIHEANEHTQKHSRFLLTGVKLSPTCFSYQTSSSSDG
Sbjct: 61  CQERRALVFCQQDRAILCRECDISIHEANEHTQKHSRFLLTGVKLSPTCFSYQTSSSSDG 120

Query: 121 CDAAMDVKTGSSHACSKRPKTATKEISSSHSAEKAAPSTSNYKAEDGQASDGGSLSTSSI 180
           CDA MDVKTGSSHACSKRPKTATKEISSSHSAEKAAPSTSNYKAEDGQASDGGSLSTSSI
Sbjct: 121 CDAGMDVKTGSSHACSKRPKTATKEISSSHSAEKAAPSTSNYKAEDGQASDGGSLSTSSI 180

Query: 181 SEYLETLPGWCVEEFLDPSAAAANRFCK 209
           SEYLETLPGWCVEEFLDPSAAAANRFCK
Sbjct: 181 SEYLETLPGWCVEEFLDPSAAAANRFCK 208

[Close]

BLAST of MS022101 vs. NCBI nr
Match: XP_022135716.1 (B-box zinc finger protein 20 isoform X2 [Momordica charantia])

HSP 1 Score: 410.2 bits (1053), Expect = 1.1e-110
Identity = 205/206 (99.51%), Postives = 205/206 (99.51%), Query Frame = 0


Query: 1   MKIRCDVCDKAEAAVFCSADEAALCHGCDLQVHQANKLAGKHSRFSLLQPIVTESPICDI 60
           MKIRCDVCDKAEAAVFCSADEAALCHGCDLQVHQANKLAGKHSRFSLLQPIVTESPICDI
Sbjct: 1   MKIRCDVCDKAEAAVFCSADEAALCHGCDLQVHQANKLAGKHSRFSLLQPIVTESPICDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHEANEHTQKHSRFLLTGVKLSPTCFSYQTSSSSDG 120
           CQERRALVFCQQDRAILCRECDISIHEANEHTQKHSRFLLTGVKLSPTCFSYQTSSSSDG
Sbjct: 61  CQERRALVFCQQDRAILCRECDISIHEANEHTQKHSRFLLTGVKLSPTCFSYQTSSSSDG 120

Query: 121 CDAAMDVKTGSSHACSKRPKTATKEISSSHSAEKAAPSTSNYKAEDGQASDGGSLSTSSI 180
           CDA MDVKTGSSHACSKRPKTATKEISSSHSAEKAAPSTSNYKAEDGQASDGGSLSTSSI
Sbjct: 121 CDAGMDVKTGSSHACSKRPKTATKEISSSHSAEKAAPSTSNYKAEDGQASDGGSLSTSSI 180

Query: 181 SEYLETLPGWCVEEFLDPSAAAANRF 207
           SEYLETLPGWCVEEFLDPSAAAANRF
Sbjct: 181 SEYLETLPGWCVEEFLDPSAAAANRF 206

[Close]

BLAST of MS022101 vs. NCBI nr
Match: XP_023553894.1 (B-box zinc finger protein 20-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 366.7 bits (940), Expect = 1.4e-97
Identity = 187/215 (86.98%), Postives = 195/215 (90.70%), Query Frame = 0


Query: 1   MKIRCDVCDKAEAAVFCSADEAALCHGCDLQVHQANKLAGKHSRFSLLQPIVTESPICDI 60
           MKIRCDVCD+AEA+VFC ADEAALCHGCDL VH+ANKLAGKHSRFSL+QPI  +SP CDI
Sbjct: 1   MKIRCDVCDQAEASVFCYADEAALCHGCDLHVHRANKLAGKHSRFSLIQPIKKDSPRCDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHEANEHTQKHSRFLLTGVKLSPTCFSYQTSSSSDG 120
           CQERRALVFCQQDRAI+CRECDISIHE NEHTQKHSRFLLTGVKLS TCFS QTSSSS G
Sbjct: 61  CQERRALVFCQQDRAIICRECDISIHETNEHTQKHSRFLLTGVKLSSTCFSSQTSSSSHG 120

Query: 121 CDAAMDVKTGSSHACSKRPKTATKEISSSHSAEKAAPSTSNYKAEDGQASDGGSLSTSSI 180
           CDAAMDVKTGSSHACSK+PK A K I SSHSAEKAAPSTSNYK EDGQASDGGS STSSI
Sbjct: 121 CDAAMDVKTGSSHACSKKPKIAVKAI-SSHSAEKAAPSTSNYKVEDGQASDGGSFSTSSI 180

Query: 181 SEYLETLPGWCVEEFLDPSAAAANRFCKVCSTPSV 216
           SEYLETLP WC+EEFLDPS A AN FCKV STPSV
Sbjct: 181 SEYLETLPEWCLEEFLDPS-AVANHFCKVRSTPSV 213

[Close]

BLAST of MS022101 vs. NCBI nr
Match: XP_038887850.1 (B-box zinc finger protein 20-like isoform X1 [Benincasa hispida])

HSP 1 Score: 362.8 bits (930), Expect = 2.0e-96
Identity = 184/209 (88.04%), Postives = 191/209 (91.39%), Query Frame = 0


Query: 1   MKIRCDVCDKAEAAVFCSADEAALCHGCDLQVHQANKLAGKHSRFSLLQPIVTESPICDI 60
           MKIRCDVCD+AEA+VFC ADEAALCH CDL VH+ANKLAGKHSRFSLLQPI  +SP CDI
Sbjct: 1   MKIRCDVCDQAEASVFCYADEAALCHACDLHVHRANKLAGKHSRFSLLQPIKKDSPRCDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHEANEHTQKHSRFLLTGVKLSPTCFSYQTSSSSDG 120
           CQERRALVFCQQDRAILCRECDISIHE NEHTQKH+RFLLTGVKLS TCFSYQTSSSS+G
Sbjct: 61  CQERRALVFCQQDRAILCRECDISIHETNEHTQKHNRFLLTGVKLSSTCFSYQTSSSSNG 120

Query: 121 CDAAMDVKTGSSHACSKRPKTATKEISSSHSAEKAA-PSTSNYKAEDGQASDGGSLSTSS 180
           CDAAMDVKTGSS+ACSKRPK A  EISSSHS EKA  PSTSNYK EDGQ SDGGS STSS
Sbjct: 121 CDAAMDVKTGSSNACSKRPKMAANEISSSHSGEKATPPSTSNYKVEDGQGSDGGSFSTSS 180

Query: 181 ISEYLETLPGWCVEEFLDPSAAAANRFCK 209
           ISEYLETLPGWCVEEFLDPS AAANRFCK
Sbjct: 181 ISEYLETLPGWCVEEFLDPS-AAANRFCK 208

[Close]

BLAST of MS022101 vs. NCBI nr
Match: XP_023531436.1 (B-box zinc finger protein 20-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 361.7 bits (927), Expect = 4.4e-96
Identity = 182/208 (87.50%), Postives = 190/208 (91.35%), Query Frame = 0


Query: 1   MKIRCDVCDKAEAAVFCSADEAALCHGCDLQVHQANKLAGKHSRFSLLQPIVTESPICDI 60
           MKIRCDVCD+AEA+VFCSADEAALCHGCDL VH+ANKLAGKHSRFSLLQPI  +SP+CDI
Sbjct: 1   MKIRCDVCDQAEASVFCSADEAALCHGCDLHVHRANKLAGKHSRFSLLQPIKIDSPLCDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHEANEHTQKHSRFLLTGVKLSPTCFSYQTSSSSDG 120
           CQERRALVFCQQDRAILCRECDISIH  NEHTQKH+RFLLTGVKLS T FSYQTSSSS+G
Sbjct: 61  CQERRALVFCQQDRAILCRECDISIHGTNEHTQKHNRFLLTGVKLSSTSFSYQTSSSSNG 120

Query: 121 CDAAMDVKTGSSHACSKRPKTATKEISSSHSAEKAAPSTSNYKAEDGQASDGGSLSTSSI 180
            +AAMDVKT SSHACSK PK A  E SSS SAEKAAPSTSNYK EDGQASDGGS STSSI
Sbjct: 121 YNAAMDVKTRSSHACSKSPKMAAHETSSSPSAEKAAPSTSNYKVEDGQASDGGSFSTSSI 180

Query: 181 SEYLETLPGWCVEEFLDPSAAAANRFCK 209
           SEYLETLPGWCVEEFLDPS AAANRFCK
Sbjct: 181 SEYLETLPGWCVEEFLDPSTAAANRFCK 208

[Close]

BLAST of MS022101 vs. ExPASy Swiss-Prot
Match: Q0IGM7 (B-box zinc finger protein 20 OS=Arabidopsis thaliana OX=3702 GN=BBX20 PE=1 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 9.1e-52
Identity = 113/200 (56.50%), Postives = 139/200 (69.50%), Query Frame = 0


Query: 1   MKIRCDVCDKAEAAVFCSADEAALCHGCDLQVHQANKLAGKHSRFSLLQPIVTESPICDI 60
           MKI C VCDK EA+VFC ADEAALC+GCD  VH ANKLAGKH RFSL  P   ++P+CDI
Sbjct: 1   MKIWCAVCDKEEASVFCCADEAALCNGCDRHVHFANKLAGKHLRFSLTSPTFKDAPLCDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHEANEHTQKHSRFLLTGVKLSPTCFSYQTSSSSDG 120
           C ERRAL+FCQ+DRAILCRECDI IH+ANEHT+KH+RFLLTGVK+S +  +Y  +S+S+ 
Sbjct: 61  CGERRALLFCQEDRAILCRECDIPIHQANEHTKKHNRFLLTGVKISASPSAYPRASNSNS 120

Query: 121 CDAAMDVKTGSSHACSKRPKTATKEISSSHSAEKAAPSTSNYKAEDGQASDGGSLS--TS 180
             A    KT      S+ P +A+ E+ +S S+   +      +      SD GS S  T 
Sbjct: 121 AAAFGRAKTRPKSVSSEVPSSASNEVFTSSSSTTTSNCYYGIEENYHHVSDSGSGSGCTG 180

Query: 181 SISEYL-ETLPGWCVEEFLD 198
           SISEYL ETLPGW VE+ L+
Sbjct: 181 SISEYLMETLPGWRVEDLLE 200

[Close]

BLAST of MS022101 vs. ExPASy Swiss-Prot
Match: Q9LQZ7 (B-box zinc finger protein 21 OS=Arabidopsis thaliana OX=3702 GN=BBX21 PE=1 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 1.5e-51
Identity = 118/203 (58.13%), Postives = 138/203 (67.98%), Query Frame = 0


Query: 1   MKIRCDVCDKAEAAVFCSADEAALCHGCDLQVHQANKLAGKHSRFSLLQPIV--TESPIC 60
           MKIRCDVCDK EA+VFC+ADEA+LC GCD QVH ANKLA KH RFSLL P    T SP+C
Sbjct: 1   MKIRCDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLC 60

Query: 61  DICQERRALVFCQQDRAILCRECDISIHEANEHTQKHSRFLLTGVKLSPTCFSYQ-TSSS 120
           DICQ+++AL+FCQQDRAILC++CD SIH ANEHT+KH RFLLTGVKLS T   Y+ TS S
Sbjct: 61  DICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLLTGVKLSATSSVYKPTSKS 120

Query: 121 SDGCDAAMDVKTGSSHACSKRPKTATKEISSSHSAEKAAPSTSNYKAEDGQASDGGSLST 180
           S    +  D     S      P    K +S+   + K  P +   K   G AS     ST
Sbjct: 121 SSSSSSNQDFSVPGSSI--SNPPPLKKPLSAPPQSNKIQPFS---KINGGDASVNQWGST 180

Query: 181 SSISEYL-ETLPGWCVEEFLDPS 200
           S+ISEYL +TLPGW VE+FLD S
Sbjct: 181 STISEYLMDTLPGWHVEDFLDSS 198

[Close]

BLAST of MS022101 vs. ExPASy Swiss-Prot
Match: Q96288 (B-box zinc finger protein 24 OS=Arabidopsis thaliana OX=3702 GN=BBX24 PE=1 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.0e-31
Identity = 63/108 (58.33%), Postives = 79/108 (73.15%), Query Frame = 0


Query: 1   MKIRCDVCDKAEAAVFCSADEAALCHGCDLQVHQANKLAGKHSRFSLLQPIVTESPICDI 60
           MKI+CDVC+KA A V C ADEAALC  CD+++H ANKLA KH R   L  + T+ P CDI
Sbjct: 1   MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLH-LNSLSTKFPRCDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHEANEHTQKHSRFLLTGVKLSPT 109
           CQE+ A +FC +DRA+LCR+CD SIH AN  +  H RFL TG+K++ T
Sbjct: 61  CQEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLATGIKVALT 107

[Close]

BLAST of MS022101 vs. ExPASy Swiss-Prot
Match: Q9SYM2 (B-box zinc finger protein 22 OS=Arabidopsis thaliana OX=3702 GN=BBX22 PE=1 SV=2)

HSP 1 Score: 134.0 bits (336), Expect = 2.0e-30
Identity = 68/130 (52.31%), Postives = 80/130 (61.54%), Query Frame = 0


Query: 1   MKIRCDVCDKAEAAVFCSADEAALCHGCDLQVHQANKLAGKHSRFSLLQPIVTESPICDI 60
           MKI+C+VC+ AEA V C ADEAALC  CD ++H ANKLAGKH R   L    +  P CDI
Sbjct: 1   MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVP-LSASASSIPKCDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHEANEHTQKHSRFLLTGVK--LSPTCFSYQTSSSS 120
           CQE     FC QDRA+LCR+CD++IH  N H   H RFLLTG+K  L        T SS 
Sbjct: 61  CQEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKVGLESIDTGPSTKSSP 120

Query: 121 DGCDAAMDVK 129
              D  M+ K
Sbjct: 121 TNDDKTMETK 129

[Close]

BLAST of MS022101 vs. ExPASy Swiss-Prot
Match: Q9SID1 (B-box zinc finger protein 25 OS=Arabidopsis thaliana OX=3702 GN=BBX25 PE=1 SV=2)

HSP 1 Score: 122.9 bits (307), Expect = 4.5e-27
Identity = 66/151 (43.71%), Postives = 88/151 (58.28%), Query Frame = 0


Query: 1   MKIRCDVCDKAEAAVFCSADEAALCHGCDLQVHQANKLAGKHSRFSLLQPIVTESPICDI 60
           MKI+CDVC+KA A + C ADEAALC  CD++VH ANKLA KH R   L  + T+ P CDI
Sbjct: 1   MKIQCDVCEKAPATLICCADEAALCAKCDVEVHAANKLASKHQRL-FLDSLSTKFPPCDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHEANEHTQKHSRFLLTGVKL---SPTCFSYQTSSS 120
           C E+ A +FC +DRA+LCR+CD + H  N  +  H RFL TG+++   S +C      + 
Sbjct: 61  CLEKAAFIFCVEDRALLCRDCDEATHAPNTRSANHQRFLATGIRVALSSTSCNQEVEKNH 120

Query: 121 SDGCDAAMDVKTGSSHACSKRPKTATKEISS 149
            D  +     K  +    +  P  AT E  S
Sbjct: 121 FDPSNQQSLSKPPTQQPAAPSPLWATDEFFS 150

[Close]

BLAST of MS022101 vs. ExPASy TrEMBL
Match: A0A6J1C1T9 (B-box zinc finger protein 20 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007609 PE=4 SV=1)

HSP 1 Score: 415.6 bits (1067), Expect = 1.2e-112
Identity = 207/208 (99.52%), Postives = 207/208 (99.52%), Query Frame = 0


Query: 1   MKIRCDVCDKAEAAVFCSADEAALCHGCDLQVHQANKLAGKHSRFSLLQPIVTESPICDI 60
           MKIRCDVCDKAEAAVFCSADEAALCHGCDLQVHQANKLAGKHSRFSLLQPIVTESPICDI
Sbjct: 1   MKIRCDVCDKAEAAVFCSADEAALCHGCDLQVHQANKLAGKHSRFSLLQPIVTESPICDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHEANEHTQKHSRFLLTGVKLSPTCFSYQTSSSSDG 120
           CQERRALVFCQQDRAILCRECDISIHEANEHTQKHSRFLLTGVKLSPTCFSYQTSSSSDG
Sbjct: 61  CQERRALVFCQQDRAILCRECDISIHEANEHTQKHSRFLLTGVKLSPTCFSYQTSSSSDG 120

Query: 121 CDAAMDVKTGSSHACSKRPKTATKEISSSHSAEKAAPSTSNYKAEDGQASDGGSLSTSSI 180
           CDA MDVKTGSSHACSKRPKTATKEISSSHSAEKAAPSTSNYKAEDGQASDGGSLSTSSI
Sbjct: 121 CDAGMDVKTGSSHACSKRPKTATKEISSSHSAEKAAPSTSNYKAEDGQASDGGSLSTSSI 180

Query: 181 SEYLETLPGWCVEEFLDPSAAAANRFCK 209
           SEYLETLPGWCVEEFLDPSAAAANRFCK
Sbjct: 181 SEYLETLPGWCVEEFLDPSAAAANRFCK 208

[Close]

BLAST of MS022101 vs. ExPASy TrEMBL
Match: A0A6J1C1I6 (B-box zinc finger protein 20 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111007609 PE=4 SV=1)

HSP 1 Score: 410.2 bits (1053), Expect = 5.2e-111
Identity = 205/206 (99.51%), Postives = 205/206 (99.51%), Query Frame = 0


Query: 1   MKIRCDVCDKAEAAVFCSADEAALCHGCDLQVHQANKLAGKHSRFSLLQPIVTESPICDI 60
           MKIRCDVCDKAEAAVFCSADEAALCHGCDLQVHQANKLAGKHSRFSLLQPIVTESPICDI
Sbjct: 1   MKIRCDVCDKAEAAVFCSADEAALCHGCDLQVHQANKLAGKHSRFSLLQPIVTESPICDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHEANEHTQKHSRFLLTGVKLSPTCFSYQTSSSSDG 120
           CQERRALVFCQQDRAILCRECDISIHEANEHTQKHSRFLLTGVKLSPTCFSYQTSSSSDG
Sbjct: 61  CQERRALVFCQQDRAILCRECDISIHEANEHTQKHSRFLLTGVKLSPTCFSYQTSSSSDG 120

Query: 121 CDAAMDVKTGSSHACSKRPKTATKEISSSHSAEKAAPSTSNYKAEDGQASDGGSLSTSSI 180
           CDA MDVKTGSSHACSKRPKTATKEISSSHSAEKAAPSTSNYKAEDGQASDGGSLSTSSI
Sbjct: 121 CDAGMDVKTGSSHACSKRPKTATKEISSSHSAEKAAPSTSNYKAEDGQASDGGSLSTSSI 180

Query: 181 SEYLETLPGWCVEEFLDPSAAAANRF 207
           SEYLETLPGWCVEEFLDPSAAAANRF
Sbjct: 181 SEYLETLPGWCVEEFLDPSAAAANRF 206

[Close]

BLAST of MS022101 vs. ExPASy TrEMBL
Match: A0A6J1EIZ3 (B-box zinc finger protein 20-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111433754 PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 4.0e-95
Identity = 180/208 (86.54%), Postives = 189/208 (90.87%), Query Frame = 0


Query: 1   MKIRCDVCDKAEAAVFCSADEAALCHGCDLQVHQANKLAGKHSRFSLLQPIVTESPICDI 60
           MKIRCDVCD+AEA+VFCSADEAALCHGCDL VH+ANKLAGKHSRFSLLQPI  +SP+CDI
Sbjct: 1   MKIRCDVCDQAEASVFCSADEAALCHGCDLHVHRANKLAGKHSRFSLLQPIKIDSPLCDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHEANEHTQKHSRFLLTGVKLSPTCFSYQTSSSSDG 120
           CQERRALVFCQQDRAILCRECDISIH  NE TQKH+RFLLTGVKLS T FSYQTSSSS+G
Sbjct: 61  CQERRALVFCQQDRAILCRECDISIHGTNERTQKHNRFLLTGVKLSSTSFSYQTSSSSNG 120

Query: 121 CDAAMDVKTGSSHACSKRPKTATKEISSSHSAEKAAPSTSNYKAEDGQASDGGSLSTSSI 180
            +AAMDVKT SSHACSK PK A  E SSS S+EKAAPSTSNYK EDGQASDGGS STSSI
Sbjct: 121 YNAAMDVKTRSSHACSKSPKMAAHETSSSPSSEKAAPSTSNYKVEDGQASDGGSFSTSSI 180

Query: 181 SEYLETLPGWCVEEFLDPSAAAANRFCK 209
           SEYLETLPGWCVEEFLDPS AAANRFCK
Sbjct: 181 SEYLETLPGWCVEEFLDPSTAAANRFCK 208

[Close]

BLAST of MS022101 vs. ExPASy TrEMBL
Match: A0A6J1I179 (LOW QUALITY PROTEIN: B-box zinc finger protein 20-like OS=Cucurbita maxima OX=3661 GN=LOC111469932 PE=4 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 1.5e-94
Identity = 179/208 (86.06%), Postives = 187/208 (89.90%), Query Frame = 0


Query: 1   MKIRCDVCDKAEAAVFCSADEAALCHGCDLQVHQANKLAGKHSRFSLLQPIVTESPICDI 60
           MKIRCDVCD+AEA+VFCSADEAALCHGCDL VH+ANKLAGKHSRFSLLQPI  + P+CDI
Sbjct: 1   MKIRCDVCDQAEASVFCSADEAALCHGCDLHVHRANKLAGKHSRFSLLQPIKIDYPLCDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHEANEHTQKHSRFLLTGVKLSPTCFSYQTSSSSDG 120
           CQERRALVFCQQDRAILCRECDISIH  NEHTQKH+RF LTGVKLS T FSYQTSSSS+G
Sbjct: 61  CQERRALVFCQQDRAILCRECDISIHGTNEHTQKHNRFFLTGVKLSSTSFSYQTSSSSNG 120

Query: 121 CDAAMDVKTGSSHACSKRPKTATKEISSSHSAEKAAPSTSNYKAEDGQASDGGSLSTSSI 180
            + AMDVKT SSHACSK PK A  E SSS SAEKAAPSTSNYK EDGQASDGGS STSSI
Sbjct: 121 YNDAMDVKTQSSHACSKSPKMAAHETSSSPSAEKAAPSTSNYKVEDGQASDGGSFSTSSI 180

Query: 181 SEYLETLPGWCVEEFLDPSAAAANRFCK 209
           SEYLETLPGWCVEEFLDPS AAANRFCK
Sbjct: 181 SEYLETLPGWCVEEFLDPSTAAANRFCK 208

[Close]

BLAST of MS022101 vs. ExPASy TrEMBL
Match: A0A6J1EFP7 (B-box zinc finger protein 20-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111433754 PE=4 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 1.7e-93
Identity = 178/206 (86.41%), Postives = 187/206 (90.78%), Query Frame = 0


Query: 1   MKIRCDVCDKAEAAVFCSADEAALCHGCDLQVHQANKLAGKHSRFSLLQPIVTESPICDI 60
           MKIRCDVCD+AEA+VFCSADEAALCHGCDL VH+ANKLAGKHSRFSLLQPI  +SP+CDI
Sbjct: 1   MKIRCDVCDQAEASVFCSADEAALCHGCDLHVHRANKLAGKHSRFSLLQPIKIDSPLCDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHEANEHTQKHSRFLLTGVKLSPTCFSYQTSSSSDG 120
           CQERRALVFCQQDRAILCRECDISIH  NE TQKH+RFLLTGVKLS T FSYQTSSSS+G
Sbjct: 61  CQERRALVFCQQDRAILCRECDISIHGTNERTQKHNRFLLTGVKLSSTSFSYQTSSSSNG 120

Query: 121 CDAAMDVKTGSSHACSKRPKTATKEISSSHSAEKAAPSTSNYKAEDGQASDGGSLSTSSI 180
            +AAMDVKT SSHACSK PK A  E SSS S+EKAAPSTSNYK EDGQASDGGS STSSI
Sbjct: 121 YNAAMDVKTRSSHACSKSPKMAAHETSSSPSSEKAAPSTSNYKVEDGQASDGGSFSTSSI 180

Query: 181 SEYLETLPGWCVEEFLDPSAAAANRF 207
           SEYLETLPGWCVEEFLDPS AAANRF
Sbjct: 181 SEYLETLPGWCVEEFLDPSTAAANRF 206

[Close]

BLAST of MS022101 vs. TAIR 10
Match: AT4G39070.1 (B-box zinc finger family protein )

HSP 1 Score: 204.9 bits (520), Expect = 6.4e-53
Identity = 113/200 (56.50%), Postives = 139/200 (69.50%), Query Frame = 0


Query: 1   MKIRCDVCDKAEAAVFCSADEAALCHGCDLQVHQANKLAGKHSRFSLLQPIVTESPICDI 60
           MKI C VCDK EA+VFC ADEAALC+GCD  VH ANKLAGKH RFSL  P   ++P+CDI
Sbjct: 1   MKIWCAVCDKEEASVFCCADEAALCNGCDRHVHFANKLAGKHLRFSLTSPTFKDAPLCDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHEANEHTQKHSRFLLTGVKLSPTCFSYQTSSSSDG 120
           C ERRAL+FCQ+DRAILCRECDI IH+ANEHT+KH+RFLLTGVK+S +  +Y  +S+S+ 
Sbjct: 61  CGERRALLFCQEDRAILCRECDIPIHQANEHTKKHNRFLLTGVKISASPSAYPRASNSNS 120

Query: 121 CDAAMDVKTGSSHACSKRPKTATKEISSSHSAEKAAPSTSNYKAEDGQASDGGSLS--TS 180
             A    KT      S+ P +A+ E+ +S S+   +      +      SD GS S  T 
Sbjct: 121 AAAFGRAKTRPKSVSSEVPSSASNEVFTSSSSTTTSNCYYGIEENYHHVSDSGSGSGCTG 180

Query: 181 SISEYL-ETLPGWCVEEFLD 198
           SISEYL ETLPGW VE+ L+
Sbjct: 181 SISEYLMETLPGWRVEDLLE 200

[Close]

BLAST of MS022101 vs. TAIR 10
Match: AT1G75540.1 (salt tolerance homolog2 )

HSP 1 Score: 204.1 bits (518), Expect = 1.1e-52
Identity = 118/203 (58.13%), Postives = 138/203 (67.98%), Query Frame = 0


Query: 1   MKIRCDVCDKAEAAVFCSADEAALCHGCDLQVHQANKLAGKHSRFSLLQPIV--TESPIC 60
           MKIRCDVCDK EA+VFC+ADEA+LC GCD QVH ANKLA KH RFSLL P    T SP+C
Sbjct: 1   MKIRCDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLC 60

Query: 61  DICQERRALVFCQQDRAILCRECDISIHEANEHTQKHSRFLLTGVKLSPTCFSYQ-TSSS 120
           DICQ+++AL+FCQQDRAILC++CD SIH ANEHT+KH RFLLTGVKLS T   Y+ TS S
Sbjct: 61  DICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLLTGVKLSATSSVYKPTSKS 120

Query: 121 SDGCDAAMDVKTGSSHACSKRPKTATKEISSSHSAEKAAPSTSNYKAEDGQASDGGSLST 180
           S    +  D     S      P    K +S+   + K  P +   K   G AS     ST
Sbjct: 121 SSSSSSNQDFSVPGSSI--SNPPPLKKPLSAPPQSNKIQPFS---KINGGDASVNQWGST 180

Query: 181 SSISEYL-ETLPGWCVEEFLDPS 200
           S+ISEYL +TLPGW VE+FLD S
Sbjct: 181 STISEYLMDTLPGWHVEDFLDSS 198

[Close]

BLAST of MS022101 vs. TAIR 10
Match: AT1G06040.2 (B-box zinc finger family protein )

HSP 1 Score: 138.3 bits (347), Expect = 7.4e-33
Identity = 63/108 (58.33%), Postives = 79/108 (73.15%), Query Frame = 0


Query: 1   MKIRCDVCDKAEAAVFCSADEAALCHGCDLQVHQANKLAGKHSRFSLLQPIVTESPICDI 60
           MKI+CDVC+KA A V C ADEAALC  CD+++H ANKLA KH R   L  + T+ P CDI
Sbjct: 1   MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLH-LNSLSTKFPRCDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHEANEHTQKHSRFLLTGVKLSPT 109
           CQE+ A +FC +DRA+LCR+CD SIH AN  +  H RFL TG+K++ T
Sbjct: 61  CQEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLATGIKVALT 107

[Close]

BLAST of MS022101 vs. TAIR 10
Match: AT1G06040.1 (B-box zinc finger family protein )

HSP 1 Score: 138.3 bits (347), Expect = 7.4e-33
Identity = 63/108 (58.33%), Postives = 79/108 (73.15%), Query Frame = 0


Query: 1   MKIRCDVCDKAEAAVFCSADEAALCHGCDLQVHQANKLAGKHSRFSLLQPIVTESPICDI 60
           MKI+CDVC+KA A V C ADEAALC  CD+++H ANKLA KH R   L  + T+ P CDI
Sbjct: 1   MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLH-LNSLSTKFPRCDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHEANEHTQKHSRFLLTGVKLSPT 109
           CQE+ A +FC +DRA+LCR+CD SIH AN  +  H RFL TG+K++ T
Sbjct: 61  CQEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLATGIKVALT 107

[Close]

BLAST of MS022101 vs. TAIR 10
Match: AT1G78600.1 (light-regulated zinc finger protein 1 )

HSP 1 Score: 134.0 bits (336), Expect = 1.4e-31
Identity = 68/130 (52.31%), Postives = 80/130 (61.54%), Query Frame = 0


Query: 1   MKIRCDVCDKAEAAVFCSADEAALCHGCDLQVHQANKLAGKHSRFSLLQPIVTESPICDI 60
           MKI+C+VC+ AEA V C ADEAALC  CD ++H ANKLAGKH R   L    +  P CDI
Sbjct: 1   MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVP-LSASASSIPKCDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHEANEHTQKHSRFLLTGVK--LSPTCFSYQTSSSS 120
           CQE     FC QDRA+LCR+CD++IH  N H   H RFLLTG+K  L        T SS 
Sbjct: 61  CQEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKVGLESIDTGPSTKSSP 120

Query: 121 DGCDAAMDVK 129
              D  M+ K
Sbjct: 121 TNDDKTMETK 129

The following BLAST results are available for this feature:

BLAST of MS022101 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022135715.1	2.6e-112	99.52	B-box zinc finger protein 20 isoform X1 [Momordica charantia]	[more]
XP_022135716.1	1.1e-110	99.51	B-box zinc finger protein 20 isoform X2 [Momordica charantia]	[more]
XP_023553894.1	1.4e-97	86.98	B-box zinc finger protein 20-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_038887850.1	2.0e-96	88.04	B-box zinc finger protein 20-like isoform X1 [Benincasa hispida]	[more]
XP_023531436.1	4.4e-96	87.50	B-box zinc finger protein 20-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MS022101 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0IGM7	9.1e-52	56.50	B-box zinc finger protein 20 OS=Arabidopsis thaliana OX=3702 GN=BBX20 PE=1 SV=1	[more]
Q9LQZ7	1.5e-51	58.13	B-box zinc finger protein 21 OS=Arabidopsis thaliana OX=3702 GN=BBX21 PE=1 SV=1	[more]
Q96288	1.0e-31	58.33	B-box zinc finger protein 24 OS=Arabidopsis thaliana OX=3702 GN=BBX24 PE=1 SV=1	[more]
Q9SYM2	2.0e-30	52.31	B-box zinc finger protein 22 OS=Arabidopsis thaliana OX=3702 GN=BBX22 PE=1 SV=2	[more]
Q9SID1	4.5e-27	43.71	B-box zinc finger protein 25 OS=Arabidopsis thaliana OX=3702 GN=BBX25 PE=1 SV=2	[more]

BLAST of MS022101 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C1T9	1.2e-112	99.52	B-box zinc finger protein 20 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A6J1C1I6	5.2e-111	99.51	B-box zinc finger protein 20 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A6J1EIZ3	4.0e-95	86.54	B-box zinc finger protein 20-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1I179	1.5e-94	86.06	LOW QUALITY PROTEIN: B-box zinc finger protein 20-like OS=Cucurbita maxima OX=36...	[more]
A0A6J1EFP7	1.7e-93	86.41	B-box zinc finger protein 20-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LO...	[more]

BLAST of MS022101 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G39070.1	6.4e-53	56.50	B-box zinc finger family protein	[more]
AT1G75540.1	1.1e-52	58.13	salt tolerance homolog2	[more]
AT1G06040.2	7.4e-33	58.33	B-box zinc finger family protein	[more]
AT1G06040.1	7.4e-33	58.33	B-box zinc finger family protein	[more]
AT1G78600.1	1.4e-31	52.31	light-regulated zinc finger protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000315	B-box-type zinc finger	SMART	SM00336	bboxneu5	coord: 4..47 e-value: 2.7E-9 score: 46.9 coord: 53..100 e-value: 4.6E-14 score: 62.7
IPR000315	B-box-type zinc finger	PFAM	PF00643	zf-B_box	coord: 54..92 e-value: 2.2E-7 score: 30.9 coord: 3..44 e-value: 2.8E-6 score: 27.4
IPR000315	B-box-type zinc finger	PROSITE	PS50119	ZF_BBOX	coord: 53..100 score: 10.309793
IPR000315	B-box-type zinc finger	PROSITE	PS50119	ZF_BBOX	coord: 1..47 score: 9.982633
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 1..99 e-value: 4.2E-9 score: 38.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 145..175
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 131..175
None	No IPR available	PANTHER	PTHR31832:SF52	B-BOX ZINC FINGER PROTEIN 20	coord: 1..209
None	No IPR available	PANTHER	PTHR31832	B-BOX ZINC FINGER PROTEIN 22	coord: 1..209
None	No IPR available	CDD	cd19821	Bbox1_BBX-like	coord: 57..100 e-value: 9.23953E-15 score: 63.8559
None	No IPR available	CDD	cd19821	Bbox1_BBX-like	coord: 5..47 e-value: 9.897E-14 score: 61.1595

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS022101.1	MS022101.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008270	zinc ion binding