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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. GAAGAAGAGAGACGAGCAGCGCGAGAAGCGTTGGAAGAGGTGGAGCGGAGTGTGGAGGTAGAAGATAGCCATAAATCCTTCGAAGATTTAGAGCGCCTTTGTGGACTTCCCATACCTTACGAGGGTGGTTTCCGCAAGAGGATGCACTACTATGGTTTATATTTGAAGAAT mRNA sequence GAAGAAGAGAGACGAGCAGCGCGAGAAGCGTTGGAAGAGGTGGAGCGGAGTGTGGAGGTAGAAGATAGCCATAAATCCTTCGAAGATTTAGAGCGCCTTTGTGGACTTCCCATACCTTACGAGGGTGGTTTCCGCAAGAGGATGCACTACTATGGTTTATATTTGAAGAAT Coding sequence (CDS) GAAGAAGAGAGACGAGCAGCGCGAGAAGCGTTGGAAGAGGTGGAGCGGAGTGTGGAGGTAGAAGATAGCCATAAATCCTTCGAAGATTTAGAGCGCCTTTGTGGACTTCCCATACCTTACGAGGGTGGTTTCCGCAAGAGGATGCACTACTATGGTTTATATTTGAAGAAT Protein sequence EEERRAAREALEEVERSVEVEDSHKSFEDLERLCGLPIPYEGGFRKRMHYYGLYLKN
Homology
BLAST of MS022097 vs. NCBI nr
Match: KAA0061663.1 (transcription factor GTE9 isoform X4 [Cucumis melo var. makuwa] >TYK21138.1 transcription factor GTE9 isoform X4 [Cucumis melo var. makuwa]) HSP 1 Score: 90.1 bits (222), Expect = 6.6e-15 Identity = 44/57 (77.19%), Postives = 50/57 (87.72%), Query Frame = 0
Query: 1 EEERRAAREALEEVERSVEVEDSHKSFEDLERLCGLPIPYEGGFRKRMHYYGLYLKN 58
EE R+AAR ALEE+ERSV++EDSHKS +DLERLCG PIPY GGF+ RM YYGLYLKN
Sbjct: 140 EEIRKAARRALEELERSVDIEDSHKSVKDLERLCGWPIPYVGGFKNRMEYYGLYLKN 196
BLAST of MS022097 vs. NCBI nr
Match: KAG6571342.1 (hypothetical protein SDJN03_30257, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 78.6 bits (192), Expect = 2.0e-11 Identity = 40/57 (70.18%), Postives = 43/57 (75.44%), Query Frame = 0
Query: 1 EEERRAAREALEEVERSVEVEDSHKSFEDLERLCGLPIPYEGGFRKRMHYYGLYLKN 58
EE R AAR LEEVER V V+DSH S + ERLCG PIPY GGF RMHYYGLYLK+
Sbjct: 126 EEMRAAARRDLEEVERRVVVDDSHASLREYERLCGFPIPYVGGFLNRMHYYGLYLKD 182
BLAST of MS022097 vs. ExPASy TrEMBL
Match: A0A5D3DC97 (Transcription factor GTE9 isoform X4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold75860G00060 PE=4 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 3.2e-15 Identity = 44/57 (77.19%), Postives = 50/57 (87.72%), Query Frame = 0
Query: 1 EEERRAAREALEEVERSVEVEDSHKSFEDLERLCGLPIPYEGGFRKRMHYYGLYLKN 58
EE R+AAR ALEE+ERSV++EDSHKS +DLERLCG PIPY GGF+ RM YYGLYLKN
Sbjct: 140 EEIRKAARRALEELERSVDIEDSHKSVKDLERLCGWPIPYVGGFKNRMEYYGLYLKN 196
BLAST of MS022097 vs. ExPASy TrEMBL
Match: A0A0A0KGL2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G421730 PE=4 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 1.6e-14 Identity = 44/57 (77.19%), Postives = 50/57 (87.72%), Query Frame = 0
Query: 1 EEERRAAREALEEVERSVEVEDSHKSFEDLERLCGLPIPYEGGFRKRMHYYGLYLKN 58
EE RRAAR+ALE++ERSV+VEDSHKS +DLERLCG PIP GGF+ RM YYGLYLKN
Sbjct: 157 EEIRRAARQALEDLERSVDVEDSHKSVKDLERLCGWPIPSVGGFKNRMEYYGLYLKN 213
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAA0061663.1 | 6.6e-15 | 77.19 | transcription factor GTE9 isoform X4 [Cucumis melo var. makuwa] >TYK21138.1 tran... | [more] |
| KAG6571342.1 | 2.0e-11 | 70.18 | hypothetical protein SDJN03_30257, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3DC97 | 3.2e-15 | 77.19 | Transcription factor GTE9 isoform X4 OS=Cucumis melo var. makuwa OX=1194695 GN=E... | [more] |
| A0A0A0KGL2 | 1.6e-14 | 77.19 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G421730 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
The following mRNA feature(s) are a part of this gene:
| Feature Name | Unique Name | Type |
|---|
| MS022097.1 | MS022097.1 | mRNA |
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