MS021994 (gene) Bitter gourd (TR) v1

Overview


Name	MS021994
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	TATA box-binding protein-associated factor RNA polymerase I subunit B
Location	scaffold110: 947055 .. 953374 (+)
RNA-Seq Expression	MS021994
Synteny	MS021994

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGACCCCCGCAACTTGTCCTGCTACAACTGTGGCAGTGTAGGGCTTACAGACGGCTTCGATGGCTTCTTCTACTGCCTCCAGTGTGGTTCCCAGGCCGACGACATCATCGACACCGGCGTCGCCGACGAGGATTTGTTACTACGAGACGCCGGCGAACGCGGCGGCCCCATATACTCCCAATCCCACACGCGCCGCCGCATTCCCGCCGTTCTCAAGGTGGAGCCCCTGTCTCAGTCTCAGCCGCAGGCCCTTTTTGGCGCGGCGCACTCTCAGTTCTGGGACAGCCTTAATTTGAAGGAGGAGGGGGACGCCGTGGCGCTGTTGGATGATGGCGTGGGGCCTACCGGTCCCGAGGATTTCGGGTCCGGTGGTGTGTTATCCGGAGCTCCGAGTTTTGAGGAGTATGCTGAGGAAGTGAGGATGAGGTATGTGATGGGGTTGCAGTTGATGGTGGAGCTTCAGTGTGAAGCTTTGGTGAAGGAGTTCAAGGCGAGCCCTGTGATTTGTGGGTTGGCGGCCAGCATTTGGTTGAGATTTGTGACTGCTACACGGGTCTTTGATGAGGATTGGGCCTTTGAGGCTGTTCAGGATTCTGAGAGCCAATGCCAAGGTTTTATCACTCTTTACTTCCTCTAGAAGTTAATATTTCAATTCATTTGGCTTTAGATTGTAAACGTTTCCTGGAATTTGGTTATTATCTTTGGATGAGAGAGTTTTAATGGATGGCTTTTATTTGCTTCTTTTAACATGATTTGGTGGATTCTGGCCCCCGAATGGCAGCCCGATTGACAAGGACTTGGGGTCTCTTGGTCATACTGGCTTATAGGTCTCAAATTCAAATCTTCTGGTGAGCTTAATACCAAAAACCGTTTATGTCTCCCGGGTTCGGGTCTTGGGCGGGCTCGGGTGCTCTTTGAGTATGGGGAGGCGGAGCTTCGACTCTCAGTTATCAAAGGAAAAAAACAACATGATTGGGTTGATTCTGATGGTTGCCTTAAGAACTTAACTCATCATCATTATTCCATTGTTTCTCATGCCCATGAAAAGAGGCCAACAAAAAGTTTTGTTTAAGCATACAATGTTCCATTGGGAAAGAAGGAAAGCGAAAGAAATAAAACTAACAGGCGAGTATGAATGCATTCAAATTAAGACATAATTATCAAACAAACAAGACAACGAACAACAATGAGAAGACTTAATCATGGTCAAATCAAACCACTCCCTCCAAGCTAGGAACTTATCTTCGAAGATCCTCAAATTGCACTCCAATCATAATTCAAAAATAGTAGCTTTAACAACATTGACCCATATGGAATGAGCTTTGGAGTGAAAATCGGGGCCTACTAAAAGCTTGTTAGACAGTCTCCGTTGAAGTAATTCTGAAGTATCCGCCTGTGATATTGTTTAGATAGTCAAATATCATAGCTCTAAGTATAAAATCCATATGAAATACCTTTTCTCCTTGTTTCTTTGTTTTAGGCATAATTTTGTCTGAATGACATCATATAGATTTGTAAGTAAAGTTGGATAAATACCTCATCAATTCCTGTATGTAGTGTTACTTGGGTTTTCTTCAATTTGCTTTTTAACATGTTTTATTGTTTTCGCTAGACCTCTTAGTATTTTGAGTTGTAGTCATCTTCTTATCTTTCACTTCAGTTTCAAACTGAGTTTTCCTTCGTTTCAACAGATCCTGGAAACATTAGACCAGTTTCCAGTAGACATAAAGCAGAACCCCACAATTTGTTTGGTCAGCGGGTTGTAGTTGTATGGGTTAAATCTTTAAGAAAGAAGATACCATTATCTTGTACATTAGCCATTTCATTTTTGGCTTGCCATGTCGCCCGAGAAGCAATTTTGCCGACAGACATAATGAAGTGGTCACTTGAGGGGAAACTTCCATATTTTGCTGCTTTTATCGACATTGAAAATCGCATTGGACAAACATCAAGGGCCTGCCCTATAAGTTCAAAGCATATGTATAGGCCTTCTCGAATTCCCCCACTCCAGAAGTTAGAATCTTTGGCAGCATCAATAGCTCACACCATAGGGCTGAATCTACCTCCAGTTAACTTCCATTTGATAGCTTGTCGTTATCTTGACAAGCTGTCCCTTCCAGTTGAAAAGATTTTGCATCATGCTTGCCGCATTTACGAGTGGTCGATGCCTCCCGATTTGTGGTTGTCAACCAATGAGCTGAGGCTTCCCTCTCGTGTTTGTGTTATGTCAATTCTAATTATAGCAATGAGAATTCTCTATGATCTCCATGGTTTTGGAGAATGGGAAAAGAGTCTGTCCATTAATTGTGCTTCATCTTTCCCACCTAACCAGAAGACACATTCAAGTCCTGCTCATAATTTCAGTAACACGCAGGCTGATAGGGAAAATGGATCTGGATTTACTTCACATAATGTGGATAATCTGTCTGCCTCTGTTGAGAACTTGAATCTGCACAAGCCTGAACTGACTACTACAGAGTTCCTCTCCAAGATTGAAGCTCGATATTATGAGATCGCTGAAACTTATGGTATGATTTTAGTTTTATTGTATTTTAAAAGTTATAGCCACCGAAACTTATGCATGTGCTTTTACTAGATAAGATTATCCTTCCTCTTCCTGGTTGCTTATATTTATTACTAATGTCGTTTTGGTAACTTCAAAATTTTGTTGGCAGAATACTCTCGGGACTTGCCAACCTACCTTCAACACTGTAAGGATGTCGTCTTTGCTGGTTTAGAATCTTTATTCGAGGATCACGAGGAAGAAAAGATGATCGAACAATTTTGGAATTATTATCAAAATCAGAAGGTAATGACTATACTGCAAGTCTGTTCTTTTTTTCTTTTCTCTTTTCAGAAATGAATTCAAATTTCTTTGATGATTGAGATTCTTGCACAACATATGATGAATTCCCTTTCTTTTCTTAATAAGGATGGTATTTTGATCTTAAGGGTAAAGAGACAAAAAAAAAAAAAGAGTGAGAAGGCTATCTTGAGTCACTGGGTGAGGCTTTTTTGAGCACTTCGCTATCTTGAACCGACCAATCACTAATAGTGGCTTCTTTAAGACTAATAGACTAGAATAATCTCAGGTTGAAAAGATGCAGCTGAATTTCTATAGCCCAAGAGTGATTCTAAAAACTCATGTTGGTCCCATTACCCATCTTAAAGTTAAAAACTCTTGGCATACATTCTTACAAACTTCCAGCGGCCCATGGTGGTCGGATGTTTGTATTTGCTGGCAGACCAACCCCCTTTTTGTAAAGTAATGAAATGATGGAATGCCACATAGAGTTTTTCTCCAGAGGAGCCTCCAATCCTGCAAATCGATGTTTTTATTTTTTATTTTTACTGAAAAACTGAGCTTTTTTATTTTTATGGCTTTTTTTACTGAAAAACTGGCTTTTTATGAGCTTTTTTTACTGAAAAACTGAGCCTCCAATCCTGCAAACTGAGCTTCATTAAAAACATTATTTTTTATTTTTATTTTGAGAAAAATGATAGAAACAATGGGCATACAAAAAAACAGCTCAACAAAAAGAGCCAAACTAAAAGAACATACTCCAAGCAAGATCAAACCTAAGGAGTAATTACAAAACACTTTTCCTCCCTAGATCTCTCCATCCCTCTAAAAATCTTGTTGTTGCTCTATACCACAAACTCCACAGAACAACAAAAAGAGAAACCCATTGAATCGATGTTTTTCAATACCATGGATCGTATTCAGAGGATGTCTTCCTTTTGTCTGGACCCGCAGTTGTGTGTTTTCTGTAGGATGCCTTGGAAAATCTCGATCATTTGTTGTGGACTTGTCAGTTTGTGTAGGATTTATGGCTTTGGTTCTTTAGGTGTTTTGGAATAGTCTGGGTCTGTTCTAGAGAGTGTAGGGCGATGATGGAGGAAGTGTTGTTATCCTCCCTTTTCGTGACAGGGGTTGTTTTCTATGGTAGGCTTCTTTTCTGGCTACTTTATGAGGTATTTGGCTGGAGAGGAACAATAGACTGTTTAGGGGGTGGAGAAATTTGTAGACTATATTTTGGATCTCATTAGGTTTAATACTTCTTTATGAGGATCGGTCGCCAAGGCCTTTTGTAATTATTAGTTAGGCAGCATTCTTTTGGATTGGAGTCCTTTTCTTTAGGGTGCTCCCTTTTTCGGGGCTATCTTTTTGTGTGCCCTTCTTGTATTTTTATATCTCTTTTCATTTTTCTCAATGAAAGCGTGGTTTCTTATAAATAATAATAATAATAATAATAATAAATAAATAAATAAATGCATTCCCATGCTGAAAGAAAATCTGTTGTCTTTTTTTTCTTTAAGGAGTTTAGACGTTCGAGCTACAATTAGCTGAATATATCTTTGGTCCCTAACACTTGCACAATCATTTTGGTTCTTAATGTTTGATGTCAAATTTTTTGTATTGAAGTCCCTACTCGTCAGTTTGTTAAAAATATTTGTGCATATCATACTTCTGGGCTGGATTATACCATAACGATTAAATTCTTTTCACATATCACATGATCTGGCTCCTCCACATTCTACCAGTATTTGTTGCCAGCTCAACTAATGTTTATAACTTTCACCTGTTGTCATGTATGAAATTTAGGAAGTTCTTTAATTGGAACAGGTCAAAGTTTTTAATGAAGCATATTTATCGACATCTCCTTTTTGCTTAAAGCAAGTGTTTGTATCATGCTTTGGCATTTAGATTATAACACTGCGGGATATGCTTATCATTGTCTTCATTATGGTTATGACATCATTGCTATTTTTTCCTGAATGTTCTTCGTTGGAATGAGTCAGAGGTTGCTGATCAATATAGAGTTTTTTTTTTAATATATATAAATATCTATGAGTGTTGTGGCAACTTGCACGTCTCGATTATTCTCACGAGATAACCGCTTGACTCTACTATATTAGATCAGGTTTAAAGGACAACCAAATATAGTGGGTTGAGGTTAGATCCTATAGTGGCTACCAAAGATATTAAAATCCTATGAGTTTTTTTAGAAACAATTGACTATTATAGGGTTGAATGGTTGTCCTATGAAATTAGTTAAGGTGCGCATAGATATCGGGAAAAGAAAGGAAAATTAGTTACTTTTGAAAAAAAAGAGAGGAATAACCAACTCAATATCATCATACTTACGTGCATTATTAACCAATGAGATTGGAAAGCAATGACTAATAGTGAGAGAATTGACTCAGTTGAAAAAAGCTTGCACACCTACTCCATTGGACAACCACTTGACCTTACTACATTGGATTTGGTCAAAAATAATAAAGGGACAATCAAATATAGTGGATTGAGGTCAAATTCCCATAGTGGCTATATATATATATATTTATTTATTTATTTATTTATTTATTTATGAGAAATTCCCATAGTGGCTATTTGAGATATTAAAATCCTATGAGTTTTTTGAGAACCAACTATTGTAGGATTAAGTGGTTGTCCCATAAAATTAGTCGAGAGGCTCACAGATATCGGAAAAAAGAAAGGGAAATTGACTGGGAGCTAATAGTTATACTTTTCAATATTATTTGCTTTTGTTGTTATGCAACACGGATTCTGTAACTGTACTAAGATTTTTACCATACCAAATTTGTTTATGAATAATTCAATGCTTATTTGGAAGGTAACATATCATAACGTAAGCATAAGCCATAACTACAACAAAATAATTGTTACAGGAGGACTCGGAACAAACAGAAGATGTAGATCAAAATGCTGCTTCCAACCAAAAGAGATTGAGGGAAGGTTCCGCTGACCGATTATCCAACGAAAGCAAGAAACTGAGAGGCGAAGAAGGTATTCGCGGAGAATCATCCGATAACAAAACTTCCAACTCAAATAATTCTCAGCAAAGCCATTCGTCCAAAAGTTCAGAAGGTGGTGATGAGGAAGAACTATCCTCTAAAGACAAAGCTCCAGCACAAACTTCCATAGACGCATCAGTCAAAAGGCTAAAACTCGACATGGAAGAGAAAAGGTTCTGCTATATTCCACCAAGGGTCAACCCGAAGAGATTCGGTTACCTTCACTACTCGAGGAAGATCGATGGAGGTGCATTGACTTACGCAGCTCATGCCGATTACTACATACTGCTTCGAGCTTGTGCTAGAGCTGCACAAGTTGATATTAGGATTATGCACATTGGAGTGCTGAGTCTTGAGAAAAGACTGTCTTGGTTAGAAGCAAGAATCCATCACTCCCTCCATTTAACTCCCTCTGGTGTTTCTTGTGAGTTTTGTAGTGATGTGGTGCCTGAAAATGCAACCGTTGATTCCATTGGCCTGTCAGATTTGAATATT

mRNA sequence

ATGGCGGACCCCCGCAACTTGTCCTGCTACAACTGTGGCAGTGTAGGGCTTACAGACGGCTTCGATGGCTTCTTCTACTGCCTCCAGTGTGGTTCCCAGGCCGACGACATCATCGACACCGGCGTCGCCGACGAGGATTTGTTACTACGAGACGCCGGCGAACGCGGCGGCCCCATATACTCCCAATCCCACACGCGCCGCCGCATTCCCGCCGTTCTCAAGGTGGAGCCCCTGTCTCAGTCTCAGCCGCAGGCCCTTTTTGGCGCGGCGCACTCTCAGTTCTGGGACAGCCTTAATTTGAAGGAGGAGGGGGACGCCGTGGCGCTGTTGGATGATGGCGTGGGGCCTACCGGTCCCGAGGATTTCGGGTCCGGTGGTGTGTTATCCGGAGCTCCGAGTTTTGAGGAGTATGCTGAGGAAGTGAGGATGAGGTATGTGATGGGGTTGCAGTTGATGGTGGAGCTTCAGTGTGAAGCTTTGGTGAAGGAGTTCAAGGCGAGCCCTGTGATTTGTGGGTTGGCGGCCAGCATTTGGTTGAGATTTGTGACTGCTACACGGGTCTTTGATGAGGATTGGGCCTTTGAGGCTGTTCAGGATTCTGAGAGCCAATGCCAAGATCCTGGAAACATTAGACCAGTTTCCAGTAGACATAAAGCAGAACCCCACAATTTGTTTGGTCAGCGGGTTGTAGTTGTATGGGTTAAATCTTTAAGAAAGAAGATACCATTATCTTGTACATTAGCCATTTCATTTTTGGCTTGCCATGTCGCCCGAGAAGCAATTTTGCCGACAGACATAATGAAGTGGTCACTTGAGGGGAAACTTCCATATTTTGCTGCTTTTATCGACATTGAAAATCGCATTGGACAAACATCAAGGGCCTGCCCTATAAGTTCAAAGCATATGTATAGGCCTTCTCGAATTCCCCCACTCCAGAAGTTAGAATCTTTGGCAGCATCAATAGCTCACACCATAGGGCTGAATCTACCTCCAGTTAACTTCCATTTGATAGCTTGTCGTTATCTTGACAAGCTGTCCCTTCCAGTTGAAAAGATTTTGCATCATGCTTGCCGCATTTACGAGTGGTCGATGCCTCCCGATTTGTGGTTGTCAACCAATGAGCTGAGGCTTCCCTCTCGTGTTTGTGTTATGTCAATTCTAATTATAGCAATGAGAATTCTCTATGATCTCCATGGTTTTGGAGAATGGGAAAAGAGTCTGTCCATTAATTGTGCTTCATCTTTCCCACCTAACCAGAAGACACATTCAAGTCCTGCTCATAATTTCAGTAACACGCAGGCTGATAGGGAAAATGGATCTGGATTTACTTCACATAATGTGGATAATCTGTCTGCCTCTGTTGAGAACTTGAATCTGCACAAGCCTGAACTGACTACTACAGAGTTCCTCTCCAAGATTGAAGCTCGATATTATGAGATCGCTGAAACTTATGAATACTCTCGGGACTTGCCAACCTACCTTCAACACTGTAAGGATGTCGTCTTTGCTGGTTTAGAATCTTTATTCGAGGATCACGAGGAAGAAAAGATGATCGAACAATTTTGGAATTATTATCAAAATCAGAAGGACTCGGAACAAACAGAAGATGTAGATCAAAATGCTGCTTCCAACCAAAAGAGATTGAGGGAAGGTTCCGCTGACCGATTATCCAACGAAAGCAAGAAACTGAGAGGCGAAGAAGGTATTCGCGGAGAATCATCCGATAACAAAACTTCCAACTCAAATAATTCTCAGCAAAGCCATTCGTCCAAAAGTTCAGAAGGTGGTGATGAGGAAGAACTATCCTCTAAAGACAAAGCTCCAGCACAAACTTCCATAGACGCATCAGTCAAAAGGCTAAAACTCGACATGGAAGAGAAAAGGTTCTGCTATATTCCACCAAGGGTCAACCCGAAGAGATTCGGTTACCTTCACTACTCGAGGAAGATCGATGGAGGTGCATTGACTTACGCAGCTCATGCCGATTACTACATACTGCTTCGAGCTTGTGCTAGAGCTGCACAAGTTGATATTAGGATTATGCACATTGGAGTGCTGAGTCTTGAGAAAAGACTGTCTTGGTTAGAAGCAAGAATCCATCACTCCCTCCATTTAACTCCCTCTGGTGTTTCTTGTGAGTTTTGTAGTGATGTGGTGCCTGAAAATGCAACCGTTGATTCCATTGGCCTGTCAGATTTGAATATT

Coding sequence (CDS)

ATGGCGGACCCCCGCAACTTGTCCTGCTACAACTGTGGCAGTGTAGGGCTTACAGACGGCTTCGATGGCTTCTTCTACTGCCTCCAGTGTGGTTCCCAGGCCGACGACATCATCGACACCGGCGTCGCCGACGAGGATTTGTTACTACGAGACGCCGGCGAACGCGGCGGCCCCATATACTCCCAATCCCACACGCGCCGCCGCATTCCCGCCGTTCTCAAGGTGGAGCCCCTGTCTCAGTCTCAGCCGCAGGCCCTTTTTGGCGCGGCGCACTCTCAGTTCTGGGACAGCCTTAATTTGAAGGAGGAGGGGGACGCCGTGGCGCTGTTGGATGATGGCGTGGGGCCTACCGGTCCCGAGGATTTCGGGTCCGGTGGTGTGTTATCCGGAGCTCCGAGTTTTGAGGAGTATGCTGAGGAAGTGAGGATGAGGTATGTGATGGGGTTGCAGTTGATGGTGGAGCTTCAGTGTGAAGCTTTGGTGAAGGAGTTCAAGGCGAGCCCTGTGATTTGTGGGTTGGCGGCCAGCATTTGGTTGAGATTTGTGACTGCTACACGGGTCTTTGATGAGGATTGGGCCTTTGAGGCTGTTCAGGATTCTGAGAGCCAATGCCAAGATCCTGGAAACATTAGACCAGTTTCCAGTAGACATAAAGCAGAACCCCACAATTTGTTTGGTCAGCGGGTTGTAGTTGTATGGGTTAAATCTTTAAGAAAGAAGATACCATTATCTTGTACATTAGCCATTTCATTTTTGGCTTGCCATGTCGCCCGAGAAGCAATTTTGCCGACAGACATAATGAAGTGGTCACTTGAGGGGAAACTTCCATATTTTGCTGCTTTTATCGACATTGAAAATCGCATTGGACAAACATCAAGGGCCTGCCCTATAAGTTCAAAGCATATGTATAGGCCTTCTCGAATTCCCCCACTCCAGAAGTTAGAATCTTTGGCAGCATCAATAGCTCACACCATAGGGCTGAATCTACCTCCAGTTAACTTCCATTTGATAGCTTGTCGTTATCTTGACAAGCTGTCCCTTCCAGTTGAAAAGATTTTGCATCATGCTTGCCGCATTTACGAGTGGTCGATGCCTCCCGATTTGTGGTTGTCAACCAATGAGCTGAGGCTTCCCTCTCGTGTTTGTGTTATGTCAATTCTAATTATAGCAATGAGAATTCTCTATGATCTCCATGGTTTTGGAGAATGGGAAAAGAGTCTGTCCATTAATTGTGCTTCATCTTTCCCACCTAACCAGAAGACACATTCAAGTCCTGCTCATAATTTCAGTAACACGCAGGCTGATAGGGAAAATGGATCTGGATTTACTTCACATAATGTGGATAATCTGTCTGCCTCTGTTGAGAACTTGAATCTGCACAAGCCTGAACTGACTACTACAGAGTTCCTCTCCAAGATTGAAGCTCGATATTATGAGATCGCTGAAACTTATGAATACTCTCGGGACTTGCCAACCTACCTTCAACACTGTAAGGATGTCGTCTTTGCTGGTTTAGAATCTTTATTCGAGGATCACGAGGAAGAAAAGATGATCGAACAATTTTGGAATTATTATCAAAATCAGAAGGACTCGGAACAAACAGAAGATGTAGATCAAAATGCTGCTTCCAACCAAAAGAGATTGAGGGAAGGTTCCGCTGACCGATTATCCAACGAAAGCAAGAAACTGAGAGGCGAAGAAGGTATTCGCGGAGAATCATCCGATAACAAAACTTCCAACTCAAATAATTCTCAGCAAAGCCATTCGTCCAAAAGTTCAGAAGGTGGTGATGAGGAAGAACTATCCTCTAAAGACAAAGCTCCAGCACAAACTTCCATAGACGCATCAGTCAAAAGGCTAAAACTCGACATGGAAGAGAAAAGGTTCTGCTATATTCCACCAAGGGTCAACCCGAAGAGATTCGGTTACCTTCACTACTCGAGGAAGATCGATGGAGGTGCATTGACTTACGCAGCTCATGCCGATTACTACATACTGCTTCGAGCTTGTGCTAGAGCTGCACAAGTTGATATTAGGATTATGCACATTGGAGTGCTGAGTCTTGAGAAAAGACTGTCTTGGTTAGAAGCAAGAATCCATCACTCCCTCCATTTAACTCCCTCTGGTGTTTCTTGTGAGTTTTGTAGTGATGTGGTGCCTGAAAATGCAACCGTTGATTCCATTGGCCTGTCAGATTTGAATATT

Protein sequence

MADPRNLSCYNCGSVGLTDGFDGFFYCLQCGSQADDIIDTGVADEDLLLRDAGERGGPIYSQSHTRRRIPAVLKVEPLSQSQPQALFGAAHSQFWDSLNLKEEGDAVALLDDGVGPTGPEDFGSGGVLSGAPSFEEYAEEVRMRYVMGLQLMVELQCEALVKEFKASPVICGLAASIWLRFVTATRVFDEDWAFEAVQDSESQCQDPGNIRPVSSRHKAEPHNLFGQRVVVVWVKSLRKKIPLSCTLAISFLACHVAREAILPTDIMKWSLEGKLPYFAAFIDIENRIGQTSRACPISSKHMYRPSRIPPLQKLESLAASIAHTIGLNLPPVNFHLIACRYLDKLSLPVEKILHHACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYDLHGFGEWEKSLSINCASSFPPNQKTHSSPAHNFSNTQADRENGSGFTSHNVDNLSASVENLNLHKPELTTTEFLSKIEARYYEIAETYEYSRDLPTYLQHCKDVVFAGLESLFEDHEEEKMIEQFWNYYQNQKDSEQTEDVDQNAASNQKRLREGSADRLSNESKKLRGEEGIRGESSDNKTSNSNNSQQSHSSKSSEGGDEEELSSKDKAPAQTSIDASVKRLKLDMEEKRFCYIPPRVNPKRFGYLHYSRKIDGGALTYAAHADYYILLRACARAAQVDIRIMHIGVLSLEKRLSWLEARIHHSLHLTPSGVSCEFCSDVVPENATVDSIGLSDLNI

Homology

[Close]

BLAST of MS021994 vs. NCBI nr
Match: XP_022149924.1 (TATA box-binding protein-associated factor RNA polymerase I subunit B [Momordica charantia])

HSP 1 Score: 1448.0 bits (3747), Expect = 0.0e+00
Identity = 731/736 (99.32%), Postives = 732/736 (99.46%), Query Frame = 0


Query: 1   MADPRNLSCYNCGSVGLTDGFDGFFYCLQCGSQADDIIDTGVADEDLLLRDAGERGGPIY 60
           MADPRNLSCYNCGSVGLTDGFDGFFYCLQCGSQADDIIDTGVADEDLLLRDAGERGGPIY
Sbjct: 1   MADPRNLSCYNCGSVGLTDGFDGFFYCLQCGSQADDIIDTGVADEDLLLRDAGERGGPIY 60

Query: 61  SQSHTRRRIPAVLKVEPLSQSQPQALFGAAHSQFWDSLNLKEEGDAVALLDDGVGPTGPE 120
           SQSHTRRRIPAVLKVEPLSQSQPQALFGAAHSQFWDSLNLKEEGDAVALLDDGVGPTGPE
Sbjct: 61  SQSHTRRRIPAVLKVEPLSQSQPQALFGAAHSQFWDSLNLKEEGDAVALLDDGVGPTGPE 120

Query: 121 DFGSGGVLSGAPSFEEYAEEVRMRYVMGLQLMVELQCEALVKEFKASPVICGLAASIWLR 180
           DFGSGGVLSGAPSFEEYAEEVRMRYVMGLQLMVELQCEALVKEFKASPVICGLAASIWLR
Sbjct: 121 DFGSGGVLSGAPSFEEYAEEVRMRYVMGLQLMVELQCEALVKEFKASPVICGLAASIWLR 180

Query: 181 FVTATRVFDEDWAFEAVQDSESQCQDPGNIRPVSSRHKAEPHNLFGQRVVVVWVKSLRKK 240
           FVTATRVFDEDWAFEAVQDSESQCQDPGNIRPVSSRHKAEPHNLFGQRVVVVWVKSLRKK
Sbjct: 181 FVTATRVFDEDWAFEAVQDSESQCQDPGNIRPVSSRHKAEPHNLFGQRVVVVWVKSLRKK 240

Query: 241 IPLSCTLAISFLACHVAREAILPTDIMKWSLEGKLPYFAAFIDIENRIGQTSRACPISSK 300
           IPLSCTLAISFLACHVAREAILPTDIMKWSLEGKLPYFAAFIDIENRIGQTSRACPISSK
Sbjct: 241 IPLSCTLAISFLACHVAREAILPTDIMKWSLEGKLPYFAAFIDIENRIGQTSRACPISSK 300

Query: 301 HMYRPSRIPPLQKLESLAASIAHTIGLNLPPVNFHLIACRYLDKLSLPVEKILHHACRIY 360
           HMYRPSRIPPLQKLESLAASIAHTIGLNLPPVNFHLIACRYLDKLSLPVEKILHHACRIY
Sbjct: 301 HMYRPSRIPPLQKLESLAASIAHTIGLNLPPVNFHLIACRYLDKLSLPVEKILHHACRIY 360

Query: 361 EWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYDLHGFGEWEKSLSINCASSFPPNQK 420
           EWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYDLHGFGEWEKSLSINCASSFPPNQK
Sbjct: 361 EWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYDLHGFGEWEKSLSINCASSFPPNQK 420

Query: 421 THSSPAHNFSNTQADRENGSGFTSHNVDNLSASVENLNLHKPELTTTEFLSKIEARYYEI 480
           THSSPAHNFSNTQADRENGSGFTSHNVDNLSASVENLNLHKPELTTTEFLSKIEARYYEI
Sbjct: 421 THSSPAHNFSNTQADRENGSGFTSHNVDNLSASVENLNLHKPELTTTEFLSKIEARYYEI 480

Query: 481 AETYEYSRDLPTYLQHCKDVVFAGLESLFEDHEEEKMIEQFWNYYQNQK-DSEQTEDVDQ 540
           AETYEYSRDLPTYLQHCKDVVFAGLESLFEDHEEEKMIEQFWNYYQNQK DSEQTEDVDQ
Sbjct: 481 AETYEYSRDLPTYLQHCKDVVFAGLESLFEDHEEEKMIEQFWNYYQNQKEDSEQTEDVDQ 540

Query: 541 NAASNQKRLREGSADRLSNESKKLRGEEGIRGESSDNKTSNSNNSQQSHSSKSSEGGDEE 600
           NAASNQKRLREGSADRLSNESKK RGEEGI  ESSDNKTSNSNNSQQSHSSKSSEGGDEE
Sbjct: 541 NAASNQKRLREGSADRLSNESKKPRGEEGISRESSDNKTSNSNNSQQSHSSKSSEGGDEE 600

Query: 601 ELSSKDKAPAQTSIDASVKRLKLDMEEKRFCYIPPRVNPKRFGYLHYSRKIDGGALTYAA 660
           ELSSKDKAPAQTSIDASVKRLKLDMEEKRFCYIPPRVNPKRFGYLHYSRKIDGGALTYAA
Sbjct: 601 ELSSKDKAPAQTSIDASVKRLKLDMEEKRFCYIPPRVNPKRFGYLHYSRKIDGGALTYAA 660

Query: 661 HADYYILLRACARAAQVDIRIMHIGVLSLEKRLSWLEARIHHSLHLTPSGVSCEFCSDVV 720
           HADYYILLRACARAAQ+DIRIMHIGVLSLEKRLSWLEARIHHSLHLTPSGVSCEFCSDVV
Sbjct: 661 HADYYILLRACARAAQIDIRIMHIGVLSLEKRLSWLEARIHHSLHLTPSGVSCEFCSDVV 720

Query: 721 PENATVDSIGLSDLNI 736
           PENATVDSIGLSDLNI
Sbjct: 721 PENATVDSIGLSDLNI 736

[Close]

BLAST of MS021994 vs. NCBI nr
Match: XP_022965475.1 (TATA box-binding protein-associated factor RNA polymerase I subunit B [Cucurbita maxima])

HSP 1 Score: 1228.8 bits (3178), Expect = 0.0e+00
Identity = 620/740 (83.78%), Postives = 670/740 (90.54%), Query Frame = 0


Query: 1   MADPRNLSCYNCGSVGLTDGFDGFFYCLQCGSQADDIIDTGVADEDLLLRDAGERGGPIY 60
           MADPRNLSCYNCGSVGLTDG DGFFYCLQCGSQADDIIDTGVADEDL+LRD G+ GGPIY
Sbjct: 1   MADPRNLSCYNCGSVGLTDGGDGFFYCLQCGSQADDIIDTGVADEDLILRDPGDAGGPIY 60

Query: 61  SQSHTRRRIPAVLKVEPLSQSQPQALFGAAHSQFWDSLNLK-----EEGDAVALLDDGVG 120
           SQSHTRRR PAVLKVEP+SQSQPQ+LFG + S+FW+SL L+     +  DA+ + +DGVG
Sbjct: 61  SQSHTRRRNPAVLKVEPISQSQPQSLFGTSQSEFWESLQLEGDNDMQRDDAIVMSNDGVG 120

Query: 121 PTGPEDFGSGGVLSGAPSFEEYAEEVRMRYVMGLQLMVELQCEALVKEFKASPVICGLAA 180
           P GPEDFGSGGVLSGAPSFEEYA+EVRMRYVMGLQLM+ELQCE LVKEF ASPVICGLAA
Sbjct: 121 PIGPEDFGSGGVLSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASPVICGLAA 180

Query: 181 SIWLRFVTATRVFDEDWAFEAVQDSESQCQDPGNIRPVSSRHKAEPHNLFGQRVVVVWVK 240
           SIWLRFVT+T+VFDEDWAFEAVQDSESQC DP NIRPVSSRHK EPHNL+GQRVVVVWV+
Sbjct: 181 SIWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVSSRHKDEPHNLYGQRVVVVWVQ 240

Query: 241 SLRKKIPLSCTLAISFLACHVAREAILPTDIMKWSLEGKLPYFAAFIDIENRIGQTSRAC 300
           SLRKKIPLSCTLA+SFLACHVAREAILPTDIMKWSLEGKLPYFAAF+DI +RIGQTSRAC
Sbjct: 241 SLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRIGQTSRAC 300

Query: 301 PISSKHMYRPSRIPPLQKLESLAASIAHTIGLNLPPVNFHLIACRYLDKLSLPVEKILHH 360
           PIS KHMYRPSRIP LQKLESLAAS+AHTIGLNLPPVNFH IA RYL+KL+LPV+KIL H
Sbjct: 301 PISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIARRYLNKLALPVDKILPH 360

Query: 361 ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYDLHGFGEWEKSLSINCASSF 420
           ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILY+LHGFGEWEKSLS NCASSF
Sbjct: 361 ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSGNCASSF 420

Query: 421 PPNQKTHSSPAHNFSNTQADRENGSGFTSHNVDNLSASVENLNLHKPELTTTEFLSKIEA 480
           PPNQK HSSPA+NFSN QA+ ENG GFTSHNVDNLS S +  +LH PELT +EFL KIEA
Sbjct: 421 PPNQKRHSSPANNFSNVQANSENGPGFTSHNVDNLSVSAKFSHLHMPELTASEFLHKIEA 480

Query: 481 RYYEIAETYEYSRDLPTYLQHCKDVVFAGLESLFEDHEEEKMIEQFWNYYQNQKDSEQTE 540
           RY+EIAETYEYS+ LP YLQHCKDVVFAGLESLFEDHEEE++IEQFW YYQN+KD EQTE
Sbjct: 481 RYHEIAETYEYSKSLPIYLQHCKDVVFAGLESLFEDHEEERLIEQFWKYYQNEKDQEQTE 540

Query: 541 DVDQNAASNQKRLREGSADRLSNESKKLRGEEGIRGESSDNKTSNSNNSQQSHSSKSSEG 600
           DVDQNAASNQKRLRE   DR SN+ KK R E+ I GESSDN+T  SNNSQQSHSSKSSE 
Sbjct: 541 DVDQNAASNQKRLREAPNDRSSNKDKKRRSEDRISGESSDNRT-ESNNSQQSHSSKSSEN 600

Query: 601 GDEEELSSKDKAPAQTSIDASVKRLKLDMEEKRFCYIPPRVNPKRFGYLHYSRKIDGGAL 660
            D +ELSS+DKA   TS D +++RLKLDMEE RFCYIPPRV PKRFGYLHYSRKID GAL
Sbjct: 601 VD-DELSSEDKASTPTSKDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHYSRKIDEGAL 660

Query: 661 TYAAHADYYILLRACARAAQVDIRIMHIGVLSLEKRLSWLEARIHHSLHLTPSGVSCEFC 720
           TYAAHADYY+LLRACARAAQV  RIMHIGVLSLEKRLSWLE+RIHHSLHLTPS VSCEFC
Sbjct: 661 TYAAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLSWLESRIHHSLHLTPSSVSCEFC 720

Query: 721 SDVVPENATVDSIGLSDLNI 736
           SDV+P++AT+DSI LSDLNI
Sbjct: 721 SDVMPDHATLDSIDLSDLNI 738

[Close]

BLAST of MS021994 vs. NCBI nr
Match: XP_023536820.1 (TATA box-binding protein-associated factor RNA polymerase I subunit B [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1225.3 bits (3169), Expect = 0.0e+00
Identity = 616/740 (83.24%), Postives = 669/740 (90.41%), Query Frame = 0


Query: 1   MADPRNLSCYNCGSVGLTDGFDGFFYCLQCGSQADDIIDTGVADEDLLLRDAGERGGPIY 60
           MADPRNLSCYNCGSVGLTDG DGFFYCLQCGSQADDIIDTGVADEDL+LRD G+ GGPIY
Sbjct: 1   MADPRNLSCYNCGSVGLTDGGDGFFYCLQCGSQADDIIDTGVADEDLILRDPGDAGGPIY 60

Query: 61  SQSHTRRRIPAVLKVEPLSQSQPQALFGAAHSQFWDSLNLK-----EEGDAVALLDDGVG 120
           SQSHTRRR PAVLKVEP+SQSQPQ+LFG + S+FW+SL L+     +  D + + +DGVG
Sbjct: 61  SQSHTRRRNPAVLKVEPISQSQPQSLFGTSQSEFWESLQLEGDNDMQRDDTIVMSNDGVG 120

Query: 121 PTGPEDFGSGGVLSGAPSFEEYAEEVRMRYVMGLQLMVELQCEALVKEFKASPVICGLAA 180
           P GPEDFGSGG LSGAPSFEEYA+EVRMRYVMGLQLM+ELQCE LVKEF ASPVICGLAA
Sbjct: 121 PIGPEDFGSGGALSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASPVICGLAA 180

Query: 181 SIWLRFVTATRVFDEDWAFEAVQDSESQCQDPGNIRPVSSRHKAEPHNLFGQRVVVVWVK 240
           SIWLRFVT+T+VFDEDWAFEAVQDSESQC DP NIRPVSSRHK EPHNL+GQRVVVVWV+
Sbjct: 181 SIWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVSSRHKDEPHNLYGQRVVVVWVQ 240

Query: 241 SLRKKIPLSCTLAISFLACHVAREAILPTDIMKWSLEGKLPYFAAFIDIENRIGQTSRAC 300
           SLRKKIPLSCTLA+SFLACHVAREAILPTDIMKWSLEGKLPYFAAF+DI +RIGQTSRAC
Sbjct: 241 SLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRIGQTSRAC 300

Query: 301 PISSKHMYRPSRIPPLQKLESLAASIAHTIGLNLPPVNFHLIACRYLDKLSLPVEKILHH 360
           PIS KHMYRPSRIP LQKLESLAAS+AHTIGLNLPPVNFH IACRYL+KL+LP++KIL H
Sbjct: 301 PISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIACRYLNKLALPIDKILPH 360

Query: 361 ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYDLHGFGEWEKSLSINCASSF 420
           ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILY+LHGFGEWEKSLS NCASSF
Sbjct: 361 ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSGNCASSF 420

Query: 421 PPNQKTHSSPAHNFSNTQADRENGSGFTSHNVDNLSASVENLNLHKPELTTTEFLSKIEA 480
           PPNQK HSSPA+NFSN QA+ ENG GFTSHNVDNLS S +  +L  PELT +EFL KIEA
Sbjct: 421 PPNQKRHSSPANNFSNVQANSENGPGFTSHNVDNLSVSAKYSHLDMPELTASEFLHKIEA 480

Query: 481 RYYEIAETYEYSRDLPTYLQHCKDVVFAGLESLFEDHEEEKMIEQFWNYYQNQKDSEQTE 540
           RY+EIAETYEYS+ LPTYLQHCKDVVFAGLESLFEDHEEE++IEQFW YYQN+KD EQTE
Sbjct: 481 RYHEIAETYEYSKSLPTYLQHCKDVVFAGLESLFEDHEEERLIEQFWKYYQNEKDQEQTE 540

Query: 541 DVDQNAASNQKRLREGSADRLSNESKKLRGEEGIRGESSDNKTSNSNNSQQSHSSKSSEG 600
           D+DQNAASNQKRLRE   DR SN+ KK R E+ I GESSDN+T  SNNSQQSHSSKSSE 
Sbjct: 541 DMDQNAASNQKRLREAPNDRSSNKDKKRRSEDRISGESSDNRT-ESNNSQQSHSSKSSEN 600

Query: 601 GDEEELSSKDKAPAQTSIDASVKRLKLDMEEKRFCYIPPRVNPKRFGYLHYSRKIDGGAL 660
            D +ELSS+DKA   TS D +++RLKLDMEE RFCYIPPRV PKRFGYLHYSRKID GAL
Sbjct: 601 VD-DELSSEDKASTPTSKDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHYSRKIDEGAL 660

Query: 661 TYAAHADYYILLRACARAAQVDIRIMHIGVLSLEKRLSWLEARIHHSLHLTPSGVSCEFC 720
           TYAAHADYY+LLRACARAAQV  RIMHIGVLSLEKRLSWLE+RI+HSLHLTPS VSCEFC
Sbjct: 661 TYAAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLSWLESRINHSLHLTPSSVSCEFC 720

Query: 721 SDVVPENATVDSIGLSDLNI 736
           SDV+P++AT+DSI LSDLNI
Sbjct: 721 SDVMPDHATLDSIDLSDLNI 738

[Close]

BLAST of MS021994 vs. NCBI nr
Match: KAG7020963.1 (TATA box-binding protein-associated factor RNA polymerase I subunit B [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1222.2 bits (3161), Expect = 0.0e+00
Identity = 615/740 (83.11%), Postives = 668/740 (90.27%), Query Frame = 0


Query: 1   MADPRNLSCYNCGSVGLTDGFDGFFYCLQCGSQADDIIDTGVADEDLLLRDAGERGGPIY 60
           MADPRNLSCYNCGSVGLTDG DGFFYCLQCGSQADDIIDTGVADEDL+LRD G+ GGPIY
Sbjct: 1   MADPRNLSCYNCGSVGLTDGGDGFFYCLQCGSQADDIIDTGVADEDLILRDPGDAGGPIY 60

Query: 61  SQSHTRRRIPAVLKVEPLSQSQPQALFGAAHSQFWDSLNLK-----EEGDAVALLDDGVG 120
           SQSHTRRR PAVLKVEPLSQSQPQ+LFG + S+FW+SL L+     +  D + + +DGVG
Sbjct: 61  SQSHTRRRNPAVLKVEPLSQSQPQSLFGTSQSEFWESLQLEGDNDMQRDDTIVMSNDGVG 120

Query: 121 PTGPEDFGSGGVLSGAPSFEEYAEEVRMRYVMGLQLMVELQCEALVKEFKASPVICGLAA 180
           P GPEDFGSGG LSGAPSFEEYA+EVRMRYVMGLQLM+ELQCE LVKEF ASPVICGLAA
Sbjct: 121 PIGPEDFGSGGALSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASPVICGLAA 180

Query: 181 SIWLRFVTATRVFDEDWAFEAVQDSESQCQDPGNIRPVSSRHKAEPHNLFGQRVVVVWVK 240
           SIWLRFVT+T+VFDEDWAFEAVQDSESQC DP NIRPVSSRHK EPHNL+GQRVVVVWV+
Sbjct: 181 SIWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVSSRHKDEPHNLYGQRVVVVWVQ 240

Query: 241 SLRKKIPLSCTLAISFLACHVAREAILPTDIMKWSLEGKLPYFAAFIDIENRIGQTSRAC 300
           SLRKKIPLSCTLA+SFLACHVAREAILPTDIMKWSLEGKLPYFAAF+DI +RIGQTSRAC
Sbjct: 241 SLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRIGQTSRAC 300

Query: 301 PISSKHMYRPSRIPPLQKLESLAASIAHTIGLNLPPVNFHLIACRYLDKLSLPVEKILHH 360
           PIS KHMYRPSRIP LQKLESLAAS+AHTIGLNLPPVNFH IACRYL+KL+LP++KIL H
Sbjct: 301 PISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIACRYLNKLALPIDKILPH 360

Query: 361 ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYDLHGFGEWEKSLSINCASSF 420
           ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILY+LHGFGEWEKSLS NCASSF
Sbjct: 361 ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSGNCASSF 420

Query: 421 PPNQKTHSSPAHNFSNTQADRENGSGFTSHNVDNLSASVENLNLHKPELTTTEFLSKIEA 480
           PPNQK HSSPA+NFSN QA+ ENG GFTSHNVDN S S +  +L  PELT +EFL KIEA
Sbjct: 421 PPNQKKHSSPANNFSNVQANSENGPGFTSHNVDNPSVSAKLSHLDMPELTASEFLHKIEA 480

Query: 481 RYYEIAETYEYSRDLPTYLQHCKDVVFAGLESLFEDHEEEKMIEQFWNYYQNQKDSEQTE 540
           RY+EIAETYEYS+ LPTYLQHCKDVVFAGLESLFEDHEEE++IEQFW YYQN+KD EQTE
Sbjct: 481 RYHEIAETYEYSKSLPTYLQHCKDVVFAGLESLFEDHEEERLIEQFWKYYQNEKDQEQTE 540

Query: 541 DVDQNAASNQKRLREGSADRLSNESKKLRGEEGIRGESSDNKTSNSNNSQQSHSSKSSEG 600
           D+DQNAASNQKRLRE   DR SN+ KK R E+ + GESSDN+T  SNNSQQSHSSKSSE 
Sbjct: 541 DMDQNAASNQKRLREAPNDRSSNKDKKRRSEDRVSGESSDNRT-ESNNSQQSHSSKSSEN 600

Query: 601 GDEEELSSKDKAPAQTSIDASVKRLKLDMEEKRFCYIPPRVNPKRFGYLHYSRKIDGGAL 660
            D +ELSS+DKA   TS D +++RLKLDMEE RFCYIPPRV PKRFGYLHYSRKID GAL
Sbjct: 601 VD-DELSSEDKASTLTSKDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHYSRKIDEGAL 660

Query: 661 TYAAHADYYILLRACARAAQVDIRIMHIGVLSLEKRLSWLEARIHHSLHLTPSGVSCEFC 720
           TYAAHADYY+LLRACARAAQV  RIMHIGVLSLEKRLSWLE+RI+HSLHLTPS VSCEFC
Sbjct: 661 TYAAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLSWLESRINHSLHLTPSSVSCEFC 720

Query: 721 SDVVPENATVDSIGLSDLNI 736
           SDV+P++AT+DSI LSDLNI
Sbjct: 721 SDVMPDHATLDSIDLSDLNI 738

[Close]

BLAST of MS021994 vs. NCBI nr
Match: XP_022937641.1 (TATA box-binding protein-associated factor RNA polymerase I subunit B [Cucurbita moschata])

HSP 1 Score: 1216.4 bits (3146), Expect = 0.0e+00
Identity = 613/740 (82.84%), Postives = 668/740 (90.27%), Query Frame = 0


Query: 1   MADPRNLSCYNCGSVGLTDGFDGFFYCLQCGSQADDIIDTGVADEDLLLRDAGERGGPIY 60
           MADPRNLSCYNCGSVGLTDG DGFFYCLQCGSQADDIIDTGVADEDL+LRD G+ GGPIY
Sbjct: 1   MADPRNLSCYNCGSVGLTDGGDGFFYCLQCGSQADDIIDTGVADEDLILRDPGDAGGPIY 60

Query: 61  SQSHTRRRIPAVLKVEPLSQSQPQALFGAAHSQFWDSLNLK-----EEGDAVALLDDGVG 120
           SQSHTRRR PAVLKVEPLSQSQPQ+LFG + S+FW+SL L+     +  D + + +DGVG
Sbjct: 61  SQSHTRRRNPAVLKVEPLSQSQPQSLFGTSQSEFWESLQLEGDNDIQRDDTIVMSNDGVG 120

Query: 121 PTGPEDFGSGGVLSGAPSFEEYAEEVRMRYVMGLQLMVELQCEALVKEFKASPVICGLAA 180
           P GPEDFGSGG LSGAPSFEEYA+EVRMRYVMGLQLM+ELQCE LVKEF ASPVICGLAA
Sbjct: 121 PIGPEDFGSGGALSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASPVICGLAA 180

Query: 181 SIWLRFVTATRVFDEDWAFEAVQDSESQCQDPGNIRPVSSRHKAEPHNLFGQRVVVVWVK 240
           SIWLRFVT+T+VFDEDWAFEAVQDSESQC DP NIRPVSSRHK EPHNL+GQRVVVVWV+
Sbjct: 181 SIWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVSSRHKDEPHNLYGQRVVVVWVQ 240

Query: 241 SLRKKIPLSCTLAISFLACHVAREAILPTDIMKWSLEGKLPYFAAFIDIENRIGQTSRAC 300
           SLRKKIPLSCTLA+SFLACHVAREAILPTDIMKWSLEGKLPYFAAF+DI +RIG+TSRAC
Sbjct: 241 SLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRIGKTSRAC 300

Query: 301 PISSKHMYRPSRIPPLQKLESLAASIAHTIGLNLPPVNFHLIACRYLDKLSLPVEKILHH 360
           PIS KHMYRPSRIP LQKLESLAAS+AHTIGLNLPPVNFH IA RYL+KL+LPV+KIL H
Sbjct: 301 PISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIARRYLNKLALPVDKILPH 360

Query: 361 ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYDLHGFGEWEKSLSINCASSF 420
           ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILY+LHGFGEWEKSLS NCASSF
Sbjct: 361 ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSGNCASSF 420

Query: 421 PPNQKTHSSPAHNFSNTQADRENGSGFTSHNVDNLSASVENLNLHKPELTTTEFLSKIEA 480
           PPNQK HSSPA++FSN QA+ ENG GFTSHNVDNLS S +  +L  PELT +EFL KIEA
Sbjct: 421 PPNQKRHSSPANDFSNVQANSENGPGFTSHNVDNLSVSAKYSHLDMPELTASEFLHKIEA 480

Query: 481 RYYEIAETYEYSRDLPTYLQHCKDVVFAGLESLFEDHEEEKMIEQFWNYYQNQKDSEQTE 540
           RY++IAETYEYS+ LPTYLQHCKDVVFAGLESLFEDHEEE++IEQFW YYQN+KD EQTE
Sbjct: 481 RYHDIAETYEYSKSLPTYLQHCKDVVFAGLESLFEDHEEERLIEQFWKYYQNEKDQEQTE 540

Query: 541 DVDQNAASNQKRLREGSADRLSNESKKLRGEEGIRGESSDNKTSNSNNSQQSHSSKSSEG 600
           D+DQNAASNQKRLRE   DR SN+ KK R E+ + GESSDN+T  SNNSQQSHSSKSSE 
Sbjct: 541 DMDQNAASNQKRLREAPNDRSSNKDKKRRSEDRVSGESSDNRT-ESNNSQQSHSSKSSEN 600

Query: 601 GDEEELSSKDKAPAQTSIDASVKRLKLDMEEKRFCYIPPRVNPKRFGYLHYSRKIDGGAL 660
            D +ELSS+DKA   TS D +++RLKLDMEE RFCYIPPRV PKRFGYLHYSRKID GAL
Sbjct: 601 VD-DELSSEDKASTLTSKDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHYSRKIDEGAL 660

Query: 661 TYAAHADYYILLRACARAAQVDIRIMHIGVLSLEKRLSWLEARIHHSLHLTPSGVSCEFC 720
           TYAAHADYY+LLRACARAAQV  RIMHIGVLSLEKRLSWLE+RI+HSLHLTPS VSCEFC
Sbjct: 661 TYAAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLSWLESRINHSLHLTPSSVSCEFC 720

Query: 721 SDVVPENATVDSIGLSDLNI 736
           SDV+P++AT+DSI LSDLNI
Sbjct: 721 SDVMPDHATLDSIDLSDLNI 738

[Close]

BLAST of MS021994 vs. ExPASy Swiss-Prot
Match: Q5XVF0 (TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Arabidopsis thaliana OX=3702 GN=MEE12 PE=1 SV=1)

HSP 1 Score: 454.5 bits (1168), Expect = 2.2e-126
Identity = 286/727 (39.34%), Postives = 400/727 (55.02%), Query Frame = 0


Query: 9   CYNCGSVGLTDGFDGFFYCLQCGSQADDIIDTGVADEDLLLRDAGERGGPIYSQSHTRRR 68
           C  C +    +  DG++YC +CG Q +++I TGV D DL+    G +G  +Y+  H R  
Sbjct: 3   CTECENDAFDEEDDGYYYCQRCGVQVENLIQTGVDDGDLIGEGGGTQGA-LYNPKHRR-- 62

Query: 69  IPAVLKVEPLSQSQPQ-----ALFGAAHSQFWDSLNLKEEGDAVALLDDGV---GPTGPE 128
                + +P++ SQP+     + +    SQF      KE    V    D      PT P 
Sbjct: 63  ----TEPQPITPSQPRFTDDTSRYSQFKSQFESENGNKELPREVKRAPDSYVDKEPTEPV 122

Query: 129 DFGSGGVLSGAPSFEEYAEEVRMRYVMGLQLMVELQCEALVKEFKASPVICGLAASIWLR 188
           DF +  +     S+E Y +E R RYV    +M+  QC+ALV +F  +P+I GL   I LR
Sbjct: 123 DFAAETL-----SYENYYDEARDRYVKAFLMMITYQCDALVDKFNVTPLIIGLVGPISLR 182

Query: 189 FVTATRVFDEDWAFEAVQDSESQCQDPGNIRPVS--SRHKAEPHNLFGQRVVVVWVKSLR 248
           +V  + V+ +DWA  A++DSE Q +D G ++      RHKAEP N+ G+R V +W   L+
Sbjct: 183 YVALSGVYHKDWANNAIRDSEHQSED-GEVKDAKRLKRHKAEPRNIDGKRAVTIWFGILK 242

Query: 249 KKIPLSCTLAISFLACHVAREAILPTDIMKWSLEGKLPYFAAFIDIENRIGQTSRACPIS 308
           K +PLS +L ISFLACH A   +LPTDI++W+ EGKLPY + F+DI  ++G+ S ACP+ 
Sbjct: 243 KTMPLSSSLVISFLACHQAGAPVLPTDIVRWAREGKLPYLSCFLDIREQMGERSAACPVK 302

Query: 309 SKHMYRPSRIPPLQKLESLAASIAHTIGLNLPPVNFHLIACRYLDKLSLPVEKILHHACR 368
              M RP ++   Q LE+ A+ IA TIGL LPPVNF+ IA  Y+ +LS+P +KIL  A  
Sbjct: 303 VSIMARPFQVISAQMLEARASVIADTIGLPLPPVNFYGIASNYIKQLSIPEDKILDLARL 362

Query: 369 IYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYDLHGFGEWEKSLSINCASSFPPN 428
           I  WS+PP+L+LSTNE +LPSRVCVMSILI+A+R+LY+++G G WE+SL    AS     
Sbjct: 363 IQNWSLPPELYLSTNEQKLPSRVCVMSILIVAIRMLYNINGLGVWERSLGFVNAS----- 422

Query: 429 QKTHSSPAHNFSNTQADRENGSGFTSHNVDNLSASVENLNLHKPELTTTEFLSKIEARYY 488
                           D E  SG                     E  T E L  +EA+Y+
Sbjct: 423 --------------DGDSETNSGTAE---------------KATEFDTQELLKNLEAKYH 482

Query: 489 EI-AETYEYSRDLPTYLQHCKDVVFAGLESLFEDHEEEKMIEQFWNYYQNQKDSE----Q 548
           E+ AET E  +DL +YL   K+  FAGLE    D +  ++++  WN Y   +D E    +
Sbjct: 483 EVAAETLESEKDLVSYLSLGKNEFFAGLEEDSPD-DTYRIVDNLWNGYPKDEDIECLPKR 542

Query: 549 TEDVDQNAASNQKRLREGSADRLSNESKKLRGEEGIRGESSDNKTSNSNNSQQSHSSKS- 608
             D D + + NQ  L                          D++ S+ NN   S S ++ 
Sbjct: 543 GRDWDDDVSLNQLSL-------------------------YDSRFSDGNNPCSSSSRRNE 602

Query: 609 --SEGGDEEELSSKDKAPAQTSIDASVKRLKLDMEEKRFCYIPPRVNPKRFGYLHYSRKI 668
             S G D      ++ +  +   + ++KRL  DM +  FCYIPPRV  KR  YL Y RK 
Sbjct: 603 SVSIGLDLSSSEHRESSSPEKLKEIAIKRLITDMGDDLFCYIPPRVKVKRLDYLQYVRKK 656

Query: 669 DGGALTYAAHADYYILLRACARAAQVDIRIMHIGVLSLEKRLSWLEARIHHSLHLTPSGV 718
           + GAL YAAHADYYILLR CA+ A++D+R MH GVLS E+RL+W+E RI   LHLT   +
Sbjct: 663 EDGALIYAAHADYYILLRVCAKVAEIDVRNMHRGVLSFERRLAWIEKRIDQVLHLTRPLM 656

[Close]

BLAST of MS021994 vs. ExPASy Swiss-Prot
Match: Q5W770 (TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0352700 PE=3 SV=2)

HSP 1 Score: 374.4 bits (960), Expect = 3.0e-102
Identity = 252/709 (35.54%), Postives = 366/709 (51.62%), Query Frame = 0


Query: 6   NLSCYNCG---SVGLTDGFDGFFYCLQCGSQADDIIDTGVADEDLLLRDAGERGGPIYSQ 65
           +L C  CG        D  DGFF C QC +      +T     D  +        P +  
Sbjct: 18  HLVCEYCGHGSEYAEDDADDGFFTCRQCSAIHTSTQNTATNPFDFPMT-------PAHLS 77

Query: 66  SHTRRRIPAVLKVEPLSQSQPQALFGAAHSQFWDSLNLKEEGDAVALLDDGVGPTGPEDF 125
           +H R   P      P  +  P A  GAA             G A    DD   P+ P DF
Sbjct: 78  AHRRPTQPT-----PTPKPFP-APRGAA------------TGAAAPDFDDLGEPSEPRDF 137

Query: 126 GSGGVLSGAPSFEEYAEEVRMRYVMGLQLMVELQCEALVKEFKASPVICGLAASIWLRFV 185
            +G    G P  E+ A  VR RYV GLQ++++ Q EALV+  +   +   LA +IWLR+V
Sbjct: 138 ATGANAWGNP--EDVAARVRWRYVRGLQVILQRQLEALVERHRVGSLAASLAGTIWLRWV 197

Query: 186 TATRVFDEDWAFE------AVQDSESQCQDPGNIRPVSSRHKAEPHNLFGQRVVVVWVKS 245
            A++VFDE W  +      +V++  S  +D  +     ++     +         ++++S
Sbjct: 198 AASKVFDEMWVHKMLAIAASVEEGHSASKDKQSELEGDAQKSQSSYEF-------LFLRS 257

Query: 246 LRKKIPLSCTLAISFLACHVAREAILPTDIMKWSLEGKLPYFAAFIDIENRIGQTSRACP 305
           LR  +P+  TLA+ FLACHVARE ILPTDI +W++EGKLPY AAF  ++  +G +   CP
Sbjct: 258 LRMMLPVYSTLAVCFLACHVARETILPTDICRWAMEGKLPYVAAFTQVDKLLGSSLNDCP 317

Query: 306 ISSKHMYRPSRIPPLQKLESLAASIAHTIGLNLPPVNFHLIACRYLDKLSLPVEKILHHA 365
           +SS+ ++RP+R+    +LE+ A SIA  IGL LP VNF+LIA R+L +LSLP+EKIL HA
Sbjct: 318 LSSRQLFRPTRVIGAWQLEAAAGSIAQKIGLLLPSVNFYLIAQRFLKELSLPIEKILPHA 377

Query: 366 CRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYDLHGFGEWEK-SLSINCASSF 425
           CRIYEW+MP +LWLS+N  R+PSRVCVM+ILI+A+R+LY ++G G WE  + + N   S 
Sbjct: 378 CRIYEWAMPAELWLSSNPGRVPSRVCVMAILIVALRVLYGINGQGIWESIAQTENAVGSD 437

Query: 426 PPNQKTHSSPAHNFSNTQADRENGSGFTSHNVDNLSASVENLNLHKPELTTTEFLSKIEA 485
           P     HS         + D  N   F +                       E L  + A
Sbjct: 438 PEASAPHS--------IEPDSNNSEEFDAR----------------------ELLCTLAA 497

Query: 486 RYYEIAETYEYSRDLPTYLQHCKDVVFAGLESLFEDHEEEKMIEQFWNYYQNQKDSEQTE 545
            Y +I   ++YS+++ +YL++CKDVVF G+       EEE +I+ FW+ Y+     ++  
Sbjct: 498 SYDKINVGHDYSKEVHSYLKYCKDVVFTGMTFSL---EEEHLIDIFWDMYK----GKEVM 557

Query: 546 DVDQNAASNQKRLREGSADRLSNESKKLRGEEGIRGESSDNKTSNSNNSQQSHSSKSSEG 605
            +D+NA   Q               +KLR   G+     D + +++              
Sbjct: 558 LLDENAKLCQ---------------EKLRTTNGVNKRCRDGRFADT-------------- 616

Query: 606 GDEEELSSKDKAPAQTSIDASVKRLKLDMEEKRFCYIPPRVNPKRFGYLHYSRKIDGGAL 665
                     K  +    + +++ +K  MEE  FCY+ PR      GYL Y+R+   G+L
Sbjct: 618 ----------KCCSTPLGNCALQSIKSKMEENGFCYVSPRKRLVSDGYLLYTRRESSGSL 616

Query: 666 TYAAHADYYILLRACARAAQVDIRIMHIGVLSLEKRLSWLEARIHHSLH 705
            Y AHADYYILLR  A+ A+VD+R++H  VL LE+RL W+E R+  SL+
Sbjct: 678 IYVAHADYYILLRPFAKLAEVDVRVLHSSVLKLERRLGWIEERVGRSLN 616

[Close]

BLAST of MS021994 vs. ExPASy Swiss-Prot
Match: B8AX23 (TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Oryza sativa subsp. indica OX=39946 GN=OsI_19584 PE=3 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 1.1e-101
Identity = 251/709 (35.40%), Postives = 366/709 (51.62%), Query Frame = 0


Query: 6   NLSCYNCG---SVGLTDGFDGFFYCLQCGSQADDIIDTGVADEDLLLRDAGERGGPIYSQ 65
           +L C  CG        D  +GFF C QC +      +T     D  +        P +  
Sbjct: 18  HLVCEYCGHGSEYAEDDADNGFFTCRQCSAIHTSTQNTATNPFDFPMT-------PAHLS 77

Query: 66  SHTRRRIPAVLKVEPLSQSQPQALFGAAHSQFWDSLNLKEEGDAVALLDDGVGPTGPEDF 125
           +H R   P      P  +  P A  GAA             G A    DD   P+ P DF
Sbjct: 78  AHRRPTQPT-----PTPKPFP-APRGAA------------TGAAAPDFDDLGEPSEPRDF 137

Query: 126 GSGGVLSGAPSFEEYAEEVRMRYVMGLQLMVELQCEALVKEFKASPVICGLAASIWLRFV 185
            +G    G P  E+ A  VR RYV GLQ++++ Q EALV+  +   +   LA +IWLR+V
Sbjct: 138 ATGANAWGNP--EDVAARVRWRYVRGLQVILQRQLEALVERHRVGSLAASLAGTIWLRWV 197

Query: 186 TATRVFDEDWAFE------AVQDSESQCQDPGNIRPVSSRHKAEPHNLFGQRVVVVWVKS 245
            A++VFDE W  +      +V++  S  +D  +     ++     +         ++++S
Sbjct: 198 AASKVFDEMWVHKMLAIAASVEEGHSASKDKQSELEGDAQKSQSSYEF-------LFLRS 257

Query: 246 LRKKIPLSCTLAISFLACHVAREAILPTDIMKWSLEGKLPYFAAFIDIENRIGQTSRACP 305
           LR  +P+  TLA+ FLACHVARE ILPTDI +W++EGKLPY AAF  ++  +G +   CP
Sbjct: 258 LRMMLPVYSTLAVCFLACHVARETILPTDICRWAMEGKLPYVAAFTQVDKLLGSSLNDCP 317

Query: 306 ISSKHMYRPSRIPPLQKLESLAASIAHTIGLNLPPVNFHLIACRYLDKLSLPVEKILHHA 365
           +SS+ ++RP+R+    +LE+ A SIA  IGL LP VNF+LIA R+L +LSLP+EKIL HA
Sbjct: 318 LSSRQLFRPTRVIGAWQLEAAAGSIAQKIGLLLPSVNFYLIAQRFLKELSLPIEKILPHA 377

Query: 366 CRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYDLHGFGEWEK-SLSINCASSF 425
           CRIYEW+MP +LWLS+N  R+PSRVCVM+ILI+A+R+LY ++G G WE  + + N   S 
Sbjct: 378 CRIYEWAMPAELWLSSNPGRVPSRVCVMAILIVALRVLYGINGQGIWESIAQTENAVGSD 437

Query: 426 PPNQKTHSSPAHNFSNTQADRENGSGFTSHNVDNLSASVENLNLHKPELTTTEFLSKIEA 485
           P     HS         + D  N   F +                       E L  + A
Sbjct: 438 PEASAPHS--------IEPDSNNSEEFDAR----------------------ELLCTLAA 497

Query: 486 RYYEIAETYEYSRDLPTYLQHCKDVVFAGLESLFEDHEEEKMIEQFWNYYQNQKDSEQTE 545
            Y +I   ++YS+++ +YL++CKDVVF G+       EEE +I+ FW+ Y+     ++  
Sbjct: 498 SYDKIDVGHDYSKEVHSYLKYCKDVVFTGMTFSL---EEEHLIDIFWDMYK----GKEVM 557

Query: 546 DVDQNAASNQKRLREGSADRLSNESKKLRGEEGIRGESSDNKTSNSNNSQQSHSSKSSEG 605
            +D+NA   Q               +KLR   G+     D + +++              
Sbjct: 558 LLDENAKLCQ---------------EKLRTTNGVNKRCRDGRFADT-------------- 616

Query: 606 GDEEELSSKDKAPAQTSIDASVKRLKLDMEEKRFCYIPPRVNPKRFGYLHYSRKIDGGAL 665
                     K  +    + +++ +K  MEE  FCY+ PR      GYL Y+R+   G+L
Sbjct: 618 ----------KCCSTPLGNCALQSIKSKMEENGFCYVSPRKRLVSDGYLLYTRRESSGSL 616

Query: 666 TYAAHADYYILLRACARAAQVDIRIMHIGVLSLEKRLSWLEARIHHSLH 705
            Y AHADYYILLR  A+ A+VD+R++H  VL LE+RL W+E R+  SL+
Sbjct: 678 IYVAHADYYILLRPFAKLAEVDVRVLHSSVLKLERRLGWIEERVGRSLN 616

[Close]

BLAST of MS021994 vs. ExPASy Swiss-Prot
Match: Q32N22 (TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Xenopus laevis OX=8355 GN=taf1b PE=2 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 3.7e-04
Identity = 45/184 (24.46%), Postives = 85/184 (46.20%), Query Frame = 0


Query: 240 KIPLSCTLAISFLACHVAREAILPTDIMKWSLEGKLPYFAAFIDIENRI---GQTSRACP 299
           K+ +  TLA  +LA    R +I  +D++++  E ++PYF A   +   I   GQ  R   
Sbjct: 203 KMSMPMTLAFCYLALLWLRASITLSDLLRFVFEKRIPYFNAHQYLPEEIKLYGQDVR--- 262

Query: 300 ISSKHMYRPSRIPPLQKLESLAASIAHTIGLNLPP-------VNFHLIACRYLDKLSLPV 359
                ++R    P    + + A  + H + L   P       ++ +++  +YL + +LP 
Sbjct: 263 -----IFRMQSFPVYNDILNKAYELGHYLDLPRFPEIIKNCYLHPNVLCMKYLMEANLPD 322

Query: 360 EKILHH-ACRIYEWSMPPDLWLST------NELRLPSRVCVMSILIIAMRILYDLHGFGE 407
           E  LHH  C++ E +   DL L T          +   V  ++++I+ +++L+ L    E
Sbjct: 323 E--LHHWTCQVAEKTGTDDLHLLTFDPACKKARHIRYDVQAVALIIVVLKLLFALDDNTE 376

[Close]

BLAST of MS021994 vs. ExPASy TrEMBL
Match: A0A6J1D8G5 (TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Momordica charantia OX=3673 GN=LOC111018221 PE=3 SV=1)

HSP 1 Score: 1448.0 bits (3747), Expect = 0.0e+00
Identity = 731/736 (99.32%), Postives = 732/736 (99.46%), Query Frame = 0


Query: 1   MADPRNLSCYNCGSVGLTDGFDGFFYCLQCGSQADDIIDTGVADEDLLLRDAGERGGPIY 60
           MADPRNLSCYNCGSVGLTDGFDGFFYCLQCGSQADDIIDTGVADEDLLLRDAGERGGPIY
Sbjct: 1   MADPRNLSCYNCGSVGLTDGFDGFFYCLQCGSQADDIIDTGVADEDLLLRDAGERGGPIY 60

Query: 61  SQSHTRRRIPAVLKVEPLSQSQPQALFGAAHSQFWDSLNLKEEGDAVALLDDGVGPTGPE 120
           SQSHTRRRIPAVLKVEPLSQSQPQALFGAAHSQFWDSLNLKEEGDAVALLDDGVGPTGPE
Sbjct: 61  SQSHTRRRIPAVLKVEPLSQSQPQALFGAAHSQFWDSLNLKEEGDAVALLDDGVGPTGPE 120

Query: 121 DFGSGGVLSGAPSFEEYAEEVRMRYVMGLQLMVELQCEALVKEFKASPVICGLAASIWLR 180
           DFGSGGVLSGAPSFEEYAEEVRMRYVMGLQLMVELQCEALVKEFKASPVICGLAASIWLR
Sbjct: 121 DFGSGGVLSGAPSFEEYAEEVRMRYVMGLQLMVELQCEALVKEFKASPVICGLAASIWLR 180

Query: 181 FVTATRVFDEDWAFEAVQDSESQCQDPGNIRPVSSRHKAEPHNLFGQRVVVVWVKSLRKK 240
           FVTATRVFDEDWAFEAVQDSESQCQDPGNIRPVSSRHKAEPHNLFGQRVVVVWVKSLRKK
Sbjct: 181 FVTATRVFDEDWAFEAVQDSESQCQDPGNIRPVSSRHKAEPHNLFGQRVVVVWVKSLRKK 240

Query: 241 IPLSCTLAISFLACHVAREAILPTDIMKWSLEGKLPYFAAFIDIENRIGQTSRACPISSK 300
           IPLSCTLAISFLACHVAREAILPTDIMKWSLEGKLPYFAAFIDIENRIGQTSRACPISSK
Sbjct: 241 IPLSCTLAISFLACHVAREAILPTDIMKWSLEGKLPYFAAFIDIENRIGQTSRACPISSK 300

Query: 301 HMYRPSRIPPLQKLESLAASIAHTIGLNLPPVNFHLIACRYLDKLSLPVEKILHHACRIY 360
           HMYRPSRIPPLQKLESLAASIAHTIGLNLPPVNFHLIACRYLDKLSLPVEKILHHACRIY
Sbjct: 301 HMYRPSRIPPLQKLESLAASIAHTIGLNLPPVNFHLIACRYLDKLSLPVEKILHHACRIY 360

Query: 361 EWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYDLHGFGEWEKSLSINCASSFPPNQK 420
           EWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYDLHGFGEWEKSLSINCASSFPPNQK
Sbjct: 361 EWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYDLHGFGEWEKSLSINCASSFPPNQK 420

Query: 421 THSSPAHNFSNTQADRENGSGFTSHNVDNLSASVENLNLHKPELTTTEFLSKIEARYYEI 480
           THSSPAHNFSNTQADRENGSGFTSHNVDNLSASVENLNLHKPELTTTEFLSKIEARYYEI
Sbjct: 421 THSSPAHNFSNTQADRENGSGFTSHNVDNLSASVENLNLHKPELTTTEFLSKIEARYYEI 480

Query: 481 AETYEYSRDLPTYLQHCKDVVFAGLESLFEDHEEEKMIEQFWNYYQNQK-DSEQTEDVDQ 540
           AETYEYSRDLPTYLQHCKDVVFAGLESLFEDHEEEKMIEQFWNYYQNQK DSEQTEDVDQ
Sbjct: 481 AETYEYSRDLPTYLQHCKDVVFAGLESLFEDHEEEKMIEQFWNYYQNQKEDSEQTEDVDQ 540

Query: 541 NAASNQKRLREGSADRLSNESKKLRGEEGIRGESSDNKTSNSNNSQQSHSSKSSEGGDEE 600
           NAASNQKRLREGSADRLSNESKK RGEEGI  ESSDNKTSNSNNSQQSHSSKSSEGGDEE
Sbjct: 541 NAASNQKRLREGSADRLSNESKKPRGEEGISRESSDNKTSNSNNSQQSHSSKSSEGGDEE 600

Query: 601 ELSSKDKAPAQTSIDASVKRLKLDMEEKRFCYIPPRVNPKRFGYLHYSRKIDGGALTYAA 660
           ELSSKDKAPAQTSIDASVKRLKLDMEEKRFCYIPPRVNPKRFGYLHYSRKIDGGALTYAA
Sbjct: 601 ELSSKDKAPAQTSIDASVKRLKLDMEEKRFCYIPPRVNPKRFGYLHYSRKIDGGALTYAA 660

Query: 661 HADYYILLRACARAAQVDIRIMHIGVLSLEKRLSWLEARIHHSLHLTPSGVSCEFCSDVV 720
           HADYYILLRACARAAQ+DIRIMHIGVLSLEKRLSWLEARIHHSLHLTPSGVSCEFCSDVV
Sbjct: 661 HADYYILLRACARAAQIDIRIMHIGVLSLEKRLSWLEARIHHSLHLTPSGVSCEFCSDVV 720

Query: 721 PENATVDSIGLSDLNI 736
           PENATVDSIGLSDLNI
Sbjct: 721 PENATVDSIGLSDLNI 736

[Close]

BLAST of MS021994 vs. ExPASy TrEMBL
Match: A0A6J1HNT6 (TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Cucurbita maxima OX=3661 GN=LOC111465368 PE=3 SV=1)

HSP 1 Score: 1228.8 bits (3178), Expect = 0.0e+00
Identity = 620/740 (83.78%), Postives = 670/740 (90.54%), Query Frame = 0


Query: 1   MADPRNLSCYNCGSVGLTDGFDGFFYCLQCGSQADDIIDTGVADEDLLLRDAGERGGPIY 60
           MADPRNLSCYNCGSVGLTDG DGFFYCLQCGSQADDIIDTGVADEDL+LRD G+ GGPIY
Sbjct: 1   MADPRNLSCYNCGSVGLTDGGDGFFYCLQCGSQADDIIDTGVADEDLILRDPGDAGGPIY 60

Query: 61  SQSHTRRRIPAVLKVEPLSQSQPQALFGAAHSQFWDSLNLK-----EEGDAVALLDDGVG 120
           SQSHTRRR PAVLKVEP+SQSQPQ+LFG + S+FW+SL L+     +  DA+ + +DGVG
Sbjct: 61  SQSHTRRRNPAVLKVEPISQSQPQSLFGTSQSEFWESLQLEGDNDMQRDDAIVMSNDGVG 120

Query: 121 PTGPEDFGSGGVLSGAPSFEEYAEEVRMRYVMGLQLMVELQCEALVKEFKASPVICGLAA 180
           P GPEDFGSGGVLSGAPSFEEYA+EVRMRYVMGLQLM+ELQCE LVKEF ASPVICGLAA
Sbjct: 121 PIGPEDFGSGGVLSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASPVICGLAA 180

Query: 181 SIWLRFVTATRVFDEDWAFEAVQDSESQCQDPGNIRPVSSRHKAEPHNLFGQRVVVVWVK 240
           SIWLRFVT+T+VFDEDWAFEAVQDSESQC DP NIRPVSSRHK EPHNL+GQRVVVVWV+
Sbjct: 181 SIWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVSSRHKDEPHNLYGQRVVVVWVQ 240

Query: 241 SLRKKIPLSCTLAISFLACHVAREAILPTDIMKWSLEGKLPYFAAFIDIENRIGQTSRAC 300
           SLRKKIPLSCTLA+SFLACHVAREAILPTDIMKWSLEGKLPYFAAF+DI +RIGQTSRAC
Sbjct: 241 SLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRIGQTSRAC 300

Query: 301 PISSKHMYRPSRIPPLQKLESLAASIAHTIGLNLPPVNFHLIACRYLDKLSLPVEKILHH 360
           PIS KHMYRPSRIP LQKLESLAAS+AHTIGLNLPPVNFH IA RYL+KL+LPV+KIL H
Sbjct: 301 PISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIARRYLNKLALPVDKILPH 360

Query: 361 ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYDLHGFGEWEKSLSINCASSF 420
           ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILY+LHGFGEWEKSLS NCASSF
Sbjct: 361 ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSGNCASSF 420

Query: 421 PPNQKTHSSPAHNFSNTQADRENGSGFTSHNVDNLSASVENLNLHKPELTTTEFLSKIEA 480
           PPNQK HSSPA+NFSN QA+ ENG GFTSHNVDNLS S +  +LH PELT +EFL KIEA
Sbjct: 421 PPNQKRHSSPANNFSNVQANSENGPGFTSHNVDNLSVSAKFSHLHMPELTASEFLHKIEA 480

Query: 481 RYYEIAETYEYSRDLPTYLQHCKDVVFAGLESLFEDHEEEKMIEQFWNYYQNQKDSEQTE 540
           RY+EIAETYEYS+ LP YLQHCKDVVFAGLESLFEDHEEE++IEQFW YYQN+KD EQTE
Sbjct: 481 RYHEIAETYEYSKSLPIYLQHCKDVVFAGLESLFEDHEEERLIEQFWKYYQNEKDQEQTE 540

Query: 541 DVDQNAASNQKRLREGSADRLSNESKKLRGEEGIRGESSDNKTSNSNNSQQSHSSKSSEG 600
           DVDQNAASNQKRLRE   DR SN+ KK R E+ I GESSDN+T  SNNSQQSHSSKSSE 
Sbjct: 541 DVDQNAASNQKRLREAPNDRSSNKDKKRRSEDRISGESSDNRT-ESNNSQQSHSSKSSEN 600

Query: 601 GDEEELSSKDKAPAQTSIDASVKRLKLDMEEKRFCYIPPRVNPKRFGYLHYSRKIDGGAL 660
            D +ELSS+DKA   TS D +++RLKLDMEE RFCYIPPRV PKRFGYLHYSRKID GAL
Sbjct: 601 VD-DELSSEDKASTPTSKDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHYSRKIDEGAL 660

Query: 661 TYAAHADYYILLRACARAAQVDIRIMHIGVLSLEKRLSWLEARIHHSLHLTPSGVSCEFC 720
           TYAAHADYY+LLRACARAAQV  RIMHIGVLSLEKRLSWLE+RIHHSLHLTPS VSCEFC
Sbjct: 661 TYAAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLSWLESRIHHSLHLTPSSVSCEFC 720

Query: 721 SDVVPENATVDSIGLSDLNI 736
           SDV+P++AT+DSI LSDLNI
Sbjct: 721 SDVMPDHATLDSIDLSDLNI 738

[Close]

BLAST of MS021994 vs. ExPASy TrEMBL
Match: A0A6J1FAY0 (TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Cucurbita moschata OX=3662 GN=LOC111443985 PE=3 SV=1)

HSP 1 Score: 1216.4 bits (3146), Expect = 0.0e+00
Identity = 613/740 (82.84%), Postives = 668/740 (90.27%), Query Frame = 0


Query: 1   MADPRNLSCYNCGSVGLTDGFDGFFYCLQCGSQADDIIDTGVADEDLLLRDAGERGGPIY 60
           MADPRNLSCYNCGSVGLTDG DGFFYCLQCGSQADDIIDTGVADEDL+LRD G+ GGPIY
Sbjct: 1   MADPRNLSCYNCGSVGLTDGGDGFFYCLQCGSQADDIIDTGVADEDLILRDPGDAGGPIY 60

Query: 61  SQSHTRRRIPAVLKVEPLSQSQPQALFGAAHSQFWDSLNLK-----EEGDAVALLDDGVG 120
           SQSHTRRR PAVLKVEPLSQSQPQ+LFG + S+FW+SL L+     +  D + + +DGVG
Sbjct: 61  SQSHTRRRNPAVLKVEPLSQSQPQSLFGTSQSEFWESLQLEGDNDIQRDDTIVMSNDGVG 120

Query: 121 PTGPEDFGSGGVLSGAPSFEEYAEEVRMRYVMGLQLMVELQCEALVKEFKASPVICGLAA 180
           P GPEDFGSGG LSGAPSFEEYA+EVRMRYVMGLQLM+ELQCE LVKEF ASPVICGLAA
Sbjct: 121 PIGPEDFGSGGALSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASPVICGLAA 180

Query: 181 SIWLRFVTATRVFDEDWAFEAVQDSESQCQDPGNIRPVSSRHKAEPHNLFGQRVVVVWVK 240
           SIWLRFVT+T+VFDEDWAFEAVQDSESQC DP NIRPVSSRHK EPHNL+GQRVVVVWV+
Sbjct: 181 SIWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVSSRHKDEPHNLYGQRVVVVWVQ 240

Query: 241 SLRKKIPLSCTLAISFLACHVAREAILPTDIMKWSLEGKLPYFAAFIDIENRIGQTSRAC 300
           SLRKKIPLSCTLA+SFLACHVAREAILPTDIMKWSLEGKLPYFAAF+DI +RIG+TSRAC
Sbjct: 241 SLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRIGKTSRAC 300

Query: 301 PISSKHMYRPSRIPPLQKLESLAASIAHTIGLNLPPVNFHLIACRYLDKLSLPVEKILHH 360
           PIS KHMYRPSRIP LQKLESLAAS+AHTIGLNLPPVNFH IA RYL+KL+LPV+KIL H
Sbjct: 301 PISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIARRYLNKLALPVDKILPH 360

Query: 361 ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYDLHGFGEWEKSLSINCASSF 420
           ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILY+LHGFGEWEKSLS NCASSF
Sbjct: 361 ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSGNCASSF 420

Query: 421 PPNQKTHSSPAHNFSNTQADRENGSGFTSHNVDNLSASVENLNLHKPELTTTEFLSKIEA 480
           PPNQK HSSPA++FSN QA+ ENG GFTSHNVDNLS S +  +L  PELT +EFL KIEA
Sbjct: 421 PPNQKRHSSPANDFSNVQANSENGPGFTSHNVDNLSVSAKYSHLDMPELTASEFLHKIEA 480

Query: 481 RYYEIAETYEYSRDLPTYLQHCKDVVFAGLESLFEDHEEEKMIEQFWNYYQNQKDSEQTE 540
           RY++IAETYEYS+ LPTYLQHCKDVVFAGLESLFEDHEEE++IEQFW YYQN+KD EQTE
Sbjct: 481 RYHDIAETYEYSKSLPTYLQHCKDVVFAGLESLFEDHEEERLIEQFWKYYQNEKDQEQTE 540

Query: 541 DVDQNAASNQKRLREGSADRLSNESKKLRGEEGIRGESSDNKTSNSNNSQQSHSSKSSEG 600
           D+DQNAASNQKRLRE   DR SN+ KK R E+ + GESSDN+T  SNNSQQSHSSKSSE 
Sbjct: 541 DMDQNAASNQKRLREAPNDRSSNKDKKRRSEDRVSGESSDNRT-ESNNSQQSHSSKSSEN 600

Query: 601 GDEEELSSKDKAPAQTSIDASVKRLKLDMEEKRFCYIPPRVNPKRFGYLHYSRKIDGGAL 660
            D +ELSS+DKA   TS D +++RLKLDMEE RFCYIPPRV PKRFGYLHYSRKID GAL
Sbjct: 601 VD-DELSSEDKASTLTSKDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHYSRKIDEGAL 660

Query: 661 TYAAHADYYILLRACARAAQVDIRIMHIGVLSLEKRLSWLEARIHHSLHLTPSGVSCEFC 720
           TYAAHADYY+LLRACARAAQV  RIMHIGVLSLEKRLSWLE+RI+HSLHLTPS VSCEFC
Sbjct: 661 TYAAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLSWLESRINHSLHLTPSSVSCEFC 720

Query: 721 SDVVPENATVDSIGLSDLNI 736
           SDV+P++AT+DSI LSDLNI
Sbjct: 721 SDVMPDHATLDSIDLSDLNI 738

[Close]

BLAST of MS021994 vs. ExPASy TrEMBL
Match: A0A1S3B4G3 (TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Cucumis melo OX=3656 GN=LOC103485898 PE=3 SV=1)

HSP 1 Score: 1151.7 bits (2978), Expect = 0.0e+00
Identity = 594/748 (79.41%), Postives = 660/748 (88.24%), Query Frame = 0


Query: 1   MADPRNLSCYNCGSVGLTDGFDGFFYCLQCGSQADDIIDTGVADEDLLLRDAGERGGPIY 60
           MADP NLSCYNCGS+GLTDGFDGFFYCLQCGSQADDIIDTGVA+EDL LRD G+ GGPIY
Sbjct: 1   MADPSNLSCYNCGSIGLTDGFDGFFYCLQCGSQADDIIDTGVAEEDLALRDVGKSGGPIY 60

Query: 61  SQSHTRRRIPAVLKVEPLSQSQPQALFGAAHSQFWDSLNLKEE--------GDAVALLDD 120
           SQSHTRRR P VLKVEPLSQSQP  LFG + S+FWDSL+LKE+         D + +L+D
Sbjct: 61  SQSHTRRRNPTVLKVEPLSQSQP--LFGTSQSEFWDSLHLKEDPSGNVGQNDDGIVMLND 120

Query: 121 GVGPTGPEDFGSGGVLSGAPSFEEYAEEVRMRYVMGLQLMVELQCEALVKEFKASPVICG 180
           GVGPTGPEDFGSG VLSG PSFEEYA+EVRMRYVMGLQL++ELQCE LVKEFKA+P+ICG
Sbjct: 121 GVGPTGPEDFGSGDVLSGKPSFEEYADEVRMRYVMGLQLIMELQCEVLVKEFKATPIICG 180

Query: 181 LAASIWLRFVTATRVFDEDWAFEAVQDSESQCQDPGNIRPVSSRHKAEPHNLFGQRVVVV 240
           LAASIWLRFVTATRVFDEDWAF+ VQ+SESQC D   IR V S HK EPHN +GQRVVV+
Sbjct: 181 LAASIWLRFVTATRVFDEDWAFQTVQESESQCLDTERIRRVCSSHKDEPHNFYGQRVVVL 240

Query: 241 WVKSLRKKIPLSCTLAISFLACHVAREAILPTDIMKWSLEGKLPYFAAFIDIENRIGQTS 300
           WVKSLRKKIPL CTLA+SFLACHVAREAILPTDI+KWSLEGKLPY+AAF+DIE+RIG+TS
Sbjct: 241 WVKSLRKKIPLFCTLAVSFLACHVAREAILPTDIIKWSLEGKLPYYAAFVDIESRIGKTS 300

Query: 301 RACPISSKHMYRPSRIPPLQKLESLAASIAHTIGLNLPPVNFHLIACRYLDKLSLPVEKI 360
           RACPISSK M+RPSRI  LQKLESLAASIAHTIGLNLPPVNFH IACRYL+KL+LPV+KI
Sbjct: 301 RACPISSKLMHRPSRISSLQKLESLAASIAHTIGLNLPPVNFHSIACRYLNKLALPVDKI 360

Query: 361 LHHACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYDLHGFGEWEKSLSINCA 420
           L HACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMR+LY+LHGFGEWEKSLS+NCA
Sbjct: 361 LPHACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRVLYNLHGFGEWEKSLSVNCA 420

Query: 421 SSFPPNQKTHSSPAHNFSNTQADRENGSGFTSHNVDNLSASVENLNLHKPELTTTEFLSK 480
           S FPPNQKTHSSPA+NFSN QAD EN  GFTSH++DN S S EN     P LTTTEFL K
Sbjct: 421 SYFPPNQKTHSSPANNFSNMQADSENRPGFTSHDLDNPSVSPEN-----PHLTTTEFLRK 480

Query: 481 IEARYYEIAETYEYSRDLPTYLQHCKDVVFAGLESLF-EDHEEEKMIEQFWNYYQNQKDS 540
           IEARY+EIAETYEYS+DLP+YLQ+CKDVVFAG ESLF +DHEE+KMIE+ WNYYQN+KD 
Sbjct: 481 IEARYHEIAETYEYSKDLPSYLQYCKDVVFAGSESLFIDDHEEQKMIEKLWNYYQNEKDH 540

Query: 541 EQTEDVDQNAASNQKRLREGSADRLSNESKKLRGEEG-IRGESSDNKTSNSNNSQQSHSS 600
           +QTEDVDQN ASN KRLREGS DRLS+ESKK++GEE  I GESS+N+T  S +S+QSHSS
Sbjct: 541 DQTEDVDQNVASNLKRLREGSNDRLSSESKKVKGEEDCISGESSNNRT-GSIDSRQSHSS 600

Query: 601 KSSEGG--DEEELSSKDKAPAQ-TSIDASVKRLKLDMEEKRFCYIPPRVNPKRFGYLHYS 660
           KS E    D++E SS+DKA +  TSI+ ++++LKLDMEEKRFCYIPPR NPKRFGYLHYS
Sbjct: 601 KSLENSDDDDDEQSSEDKAASSLTSINEAIRQLKLDMEEKRFCYIPPRANPKRFGYLHYS 660

Query: 661 RKIDGGALTYAAHADYYILLRACARAAQVDIRIMHIGVLSLEKRLSWLEARIHHSLHLTP 720
           RKID GALTYAAHADYYILLRACARAAQVDIRIMHIGVLSLEKRLSWLE RIH +L LTP
Sbjct: 661 RKIDEGALTYAAHADYYILLRACARAAQVDIRIMHIGVLSLEKRLSWLEDRIHKTLRLTP 720

Query: 721 SGVSCEFCSDVVPENATVDSIGLSDLNI 736
           S V+CEFCSD VP +  +DS+GLSDL+I
Sbjct: 721 SSVTCEFCSD-VPNH--IDSVGLSDLDI 737

[Close]

BLAST of MS021994 vs. ExPASy TrEMBL
Match: A0A5D3C954 (TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G001970 PE=3 SV=1)

HSP 1 Score: 1151.7 bits (2978), Expect = 0.0e+00
Identity = 594/748 (79.41%), Postives = 660/748 (88.24%), Query Frame = 0


Query: 1   MADPRNLSCYNCGSVGLTDGFDGFFYCLQCGSQADDIIDTGVADEDLLLRDAGERGGPIY 60
           MADP NLSCYNCGS+GLTDGFDGFFYCLQCGSQADDIIDTGVA+EDL LRD G+ GGPIY
Sbjct: 1   MADPSNLSCYNCGSIGLTDGFDGFFYCLQCGSQADDIIDTGVAEEDLALRDVGKSGGPIY 60

Query: 61  SQSHTRRRIPAVLKVEPLSQSQPQALFGAAHSQFWDSLNLKEE--------GDAVALLDD 120
           SQSHTRRR P VLKVEPLSQSQP  LFG + S+FWDSL+LKE+         D + +L+D
Sbjct: 61  SQSHTRRRNPTVLKVEPLSQSQP--LFGTSQSEFWDSLHLKEDPSGNVGQNDDGIVMLND 120

Query: 121 GVGPTGPEDFGSGGVLSGAPSFEEYAEEVRMRYVMGLQLMVELQCEALVKEFKASPVICG 180
           GVGPTGPEDFGSG VLSG PSFEEYA+EVRMRYVMGLQL++ELQCE LVKEFKA+P+ICG
Sbjct: 121 GVGPTGPEDFGSGDVLSGKPSFEEYADEVRMRYVMGLQLIMELQCEVLVKEFKATPIICG 180

Query: 181 LAASIWLRFVTATRVFDEDWAFEAVQDSESQCQDPGNIRPVSSRHKAEPHNLFGQRVVVV 240
           LAASIWLRFVTATRVFDEDWAF+ VQ+SESQC D   IR V S HK EPHN +GQRVVV+
Sbjct: 181 LAASIWLRFVTATRVFDEDWAFQTVQESESQCLDTERIRRVCSSHKDEPHNFYGQRVVVL 240

Query: 241 WVKSLRKKIPLSCTLAISFLACHVAREAILPTDIMKWSLEGKLPYFAAFIDIENRIGQTS 300
           WVKSLRKKIPL CTLA+SFLACHVAREAILPTDI+KWSLEGKLPY+AAF+DIE+RIG+TS
Sbjct: 241 WVKSLRKKIPLFCTLAVSFLACHVAREAILPTDIIKWSLEGKLPYYAAFVDIESRIGKTS 300

Query: 301 RACPISSKHMYRPSRIPPLQKLESLAASIAHTIGLNLPPVNFHLIACRYLDKLSLPVEKI 360
           RACPISSK M+RPSRI  LQKLESLAASIAHTIGLNLPPVNFH IACRYL+KL+LPV+KI
Sbjct: 301 RACPISSKLMHRPSRISSLQKLESLAASIAHTIGLNLPPVNFHSIACRYLNKLALPVDKI 360

Query: 361 LHHACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYDLHGFGEWEKSLSINCA 420
           L HACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMR+LY+LHGFGEWEKSLS+NCA
Sbjct: 361 LPHACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRVLYNLHGFGEWEKSLSVNCA 420

Query: 421 SSFPPNQKTHSSPAHNFSNTQADRENGSGFTSHNVDNLSASVENLNLHKPELTTTEFLSK 480
           S FPPNQKTHSSPA+NFSN QAD EN  GFTSH++DN S S EN     P LTTTEFL K
Sbjct: 421 SYFPPNQKTHSSPANNFSNMQADSENRPGFTSHDLDNPSVSPEN-----PHLTTTEFLRK 480

Query: 481 IEARYYEIAETYEYSRDLPTYLQHCKDVVFAGLESLF-EDHEEEKMIEQFWNYYQNQKDS 540
           IEARY+EIAETYEYS+DLP+YLQ+CKDVVFAG ESLF +DHEE+KMIE+ WNYYQN+KD 
Sbjct: 481 IEARYHEIAETYEYSKDLPSYLQYCKDVVFAGSESLFIDDHEEQKMIEKLWNYYQNEKDH 540

Query: 541 EQTEDVDQNAASNQKRLREGSADRLSNESKKLRGEEG-IRGESSDNKTSNSNNSQQSHSS 600
           +QTEDVDQN ASN KRLREGS DRLS+ESKK++GEE  I GESS+N+T  S +S+QSHSS
Sbjct: 541 DQTEDVDQNVASNLKRLREGSNDRLSSESKKVKGEEDCISGESSNNRT-GSIDSRQSHSS 600

Query: 601 KSSEGG--DEEELSSKDKAPAQ-TSIDASVKRLKLDMEEKRFCYIPPRVNPKRFGYLHYS 660
           KS E    D++E SS+DKA +  TSI+ ++++LKLDMEEKRFCYIPPR NPKRFGYLHYS
Sbjct: 601 KSLENSDDDDDEQSSEDKAASSLTSINEAIRQLKLDMEEKRFCYIPPRANPKRFGYLHYS 660

Query: 661 RKIDGGALTYAAHADYYILLRACARAAQVDIRIMHIGVLSLEKRLSWLEARIHHSLHLTP 720
           RKID GALTYAAHADYYILLRACARAAQVDIRIMHIGVLSLEKRLSWLE RIH +L LTP
Sbjct: 661 RKIDEGALTYAAHADYYILLRACARAAQVDIRIMHIGVLSLEKRLSWLEDRIHKTLRLTP 720

Query: 721 SGVSCEFCSDVVPENATVDSIGLSDLNI 736
           S V+CEFCSD VP +  +DS+GLSDL+I
Sbjct: 721 SSVTCEFCSD-VPNH--IDSVGLSDLDI 737

[Close]

BLAST of MS021994 vs. TAIR 10
Match: AT2G02955.1 (maternal effect embryo arrest 12 )

HSP 1 Score: 454.5 bits (1168), Expect = 1.6e-127
Identity = 286/727 (39.34%), Postives = 400/727 (55.02%), Query Frame = 0


Query: 9   CYNCGSVGLTDGFDGFFYCLQCGSQADDIIDTGVADEDLLLRDAGERGGPIYSQSHTRRR 68
           C  C +    +  DG++YC +CG Q +++I TGV D DL+    G +G  +Y+  H R  
Sbjct: 3   CTECENDAFDEEDDGYYYCQRCGVQVENLIQTGVDDGDLIGEGGGTQGA-LYNPKHRR-- 62

Query: 69  IPAVLKVEPLSQSQPQ-----ALFGAAHSQFWDSLNLKEEGDAVALLDDGV---GPTGPE 128
                + +P++ SQP+     + +    SQF      KE    V    D      PT P 
Sbjct: 63  ----TEPQPITPSQPRFTDDTSRYSQFKSQFESENGNKELPREVKRAPDSYVDKEPTEPV 122

Query: 129 DFGSGGVLSGAPSFEEYAEEVRMRYVMGLQLMVELQCEALVKEFKASPVICGLAASIWLR 188
           DF +  +     S+E Y +E R RYV    +M+  QC+ALV +F  +P+I GL   I LR
Sbjct: 123 DFAAETL-----SYENYYDEARDRYVKAFLMMITYQCDALVDKFNVTPLIIGLVGPISLR 182

Query: 189 FVTATRVFDEDWAFEAVQDSESQCQDPGNIRPVS--SRHKAEPHNLFGQRVVVVWVKSLR 248
           +V  + V+ +DWA  A++DSE Q +D G ++      RHKAEP N+ G+R V +W   L+
Sbjct: 183 YVALSGVYHKDWANNAIRDSEHQSED-GEVKDAKRLKRHKAEPRNIDGKRAVTIWFGILK 242

Query: 249 KKIPLSCTLAISFLACHVAREAILPTDIMKWSLEGKLPYFAAFIDIENRIGQTSRACPIS 308
           K +PLS +L ISFLACH A   +LPTDI++W+ EGKLPY + F+DI  ++G+ S ACP+ 
Sbjct: 243 KTMPLSSSLVISFLACHQAGAPVLPTDIVRWAREGKLPYLSCFLDIREQMGERSAACPVK 302

Query: 309 SKHMYRPSRIPPLQKLESLAASIAHTIGLNLPPVNFHLIACRYLDKLSLPVEKILHHACR 368
              M RP ++   Q LE+ A+ IA TIGL LPPVNF+ IA  Y+ +LS+P +KIL  A  
Sbjct: 303 VSIMARPFQVISAQMLEARASVIADTIGLPLPPVNFYGIASNYIKQLSIPEDKILDLARL 362

Query: 369 IYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYDLHGFGEWEKSLSINCASSFPPN 428
           I  WS+PP+L+LSTNE +LPSRVCVMSILI+A+R+LY+++G G WE+SL    AS     
Sbjct: 363 IQNWSLPPELYLSTNEQKLPSRVCVMSILIVAIRMLYNINGLGVWERSLGFVNAS----- 422

Query: 429 QKTHSSPAHNFSNTQADRENGSGFTSHNVDNLSASVENLNLHKPELTTTEFLSKIEARYY 488
                           D E  SG                     E  T E L  +EA+Y+
Sbjct: 423 --------------DGDSETNSGTAE---------------KATEFDTQELLKNLEAKYH 482

Query: 489 EI-AETYEYSRDLPTYLQHCKDVVFAGLESLFEDHEEEKMIEQFWNYYQNQKDSE----Q 548
           E+ AET E  +DL +YL   K+  FAGLE    D +  ++++  WN Y   +D E    +
Sbjct: 483 EVAAETLESEKDLVSYLSLGKNEFFAGLEEDSPD-DTYRIVDNLWNGYPKDEDIECLPKR 542

Query: 549 TEDVDQNAASNQKRLREGSADRLSNESKKLRGEEGIRGESSDNKTSNSNNSQQSHSSKS- 608
             D D + + NQ  L                          D++ S+ NN   S S ++ 
Sbjct: 543 GRDWDDDVSLNQLSL-------------------------YDSRFSDGNNPCSSSSRRNE 602

Query: 609 --SEGGDEEELSSKDKAPAQTSIDASVKRLKLDMEEKRFCYIPPRVNPKRFGYLHYSRKI 668
             S G D      ++ +  +   + ++KRL  DM +  FCYIPPRV  KR  YL Y RK 
Sbjct: 603 SVSIGLDLSSSEHRESSSPEKLKEIAIKRLITDMGDDLFCYIPPRVKVKRLDYLQYVRKK 656

Query: 669 DGGALTYAAHADYYILLRACARAAQVDIRIMHIGVLSLEKRLSWLEARIHHSLHLTPSGV 718
           + GAL YAAHADYYILLR CA+ A++D+R MH GVLS E+RL+W+E RI   LHLT   +
Sbjct: 663 EDGALIYAAHADYYILLRVCAKVAEIDVRNMHRGVLSFERRLAWIEKRIDQVLHLTRPLM 656

The following BLAST results are available for this feature:

BLAST of MS021994 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022149924.1	0.0e+00	99.32	TATA box-binding protein-associated factor RNA polymerase I subunit B [Momordica...	[more]
XP_022965475.1	0.0e+00	83.78	TATA box-binding protein-associated factor RNA polymerase I subunit B [Cucurbita...	[more]
XP_023536820.1	0.0e+00	83.24	TATA box-binding protein-associated factor RNA polymerase I subunit B [Cucurbita...	[more]
KAG7020963.1	0.0e+00	83.11	TATA box-binding protein-associated factor RNA polymerase I subunit B [Cucurbita...	[more]
XP_022937641.1	0.0e+00	82.84	TATA box-binding protein-associated factor RNA polymerase I subunit B [Cucurbita...	[more]

BLAST of MS021994 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5XVF0	2.2e-126	39.34	TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Arabido...	[more]
Q5W770	3.0e-102	35.54	TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Oryza s...	[more]
B8AX23	1.1e-101	35.40	TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Oryza s...	[more]
Q32N22	3.7e-04	24.46	TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Xenopus...	[more]

BLAST of MS021994 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D8G5	0.0e+00	99.32	TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Momordi...	[more]
A0A6J1HNT6	0.0e+00	83.78	TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Cucurbi...	[more]
A0A6J1FAY0	0.0e+00	82.84	TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Cucurbi...	[more]
A0A1S3B4G3	0.0e+00	79.41	TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Cucumis...	[more]
A0A5D3C954	0.0e+00	79.41	TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Cucumis...	[more]

BLAST of MS021994 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G02955.1	1.6e-127	39.34	maternal effect embryo arrest 12	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 417..445
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 530..612
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 548..573
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 574..591
IPR033599	RNA polymerase I transcription initiation factor TAF1B/Rrn7	PANTHER	PTHR31576	TATA BOX-BINDING PROTEIN-ASSOCIATED FACTOR RNA POLYMERASE I SUBUNIT B	coord: 5..717

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS021994.1	MS021994.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0001188	RNA polymerase I preinitiation complex assembly
biological_process	GO:0006360	transcription by RNA polymerase I
cellular_component	GO:0070860	RNA polymerase I core factor complex
molecular_function	GO:0001164	RNA polymerase I core promoter sequence-specific DNA binding